Metagenome Family F095473

Basic Information
Family ID	F095473
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	66 residues
Representative Sequence	MTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD
Number of Associated Samples	80
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.14 %
% of genes near scaffold ends (potentially truncated)	19.05 %
% of genes from short scaffolds (< 2000 bps)	72.38 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (58.095 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (27.619 % of family members)
Environment Ontology (ENVO)	Unclassified (57.143 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (67.619 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72. 1ErSWdraft_9385570 2JGI12421J11937_100873603 3B570J14230_100434773 4B570J40625_1000181122 5B570J40625_1000474416 6B570J40625_1004675482 7JGI25922J50271_100191886 8JGI25914J50564_100309822 9JGI25914J50564_100747631 10JGI25921J50272_101236471 11JGI25926J51410_10635761 12Ga0063232_102442262 13Ga0066177_101647231 14Ga0066180_101979692 15Ga0070374_101068511 16Ga0070374_102139072 17Ga0070374_102813242 18Ga0070374_104477601 19Ga0070374_105020292 20Ga0070374_105074301 21Ga0049085_101562731 22Ga0049082_100084255 23Ga0078894_100617233 24Ga0078894_102988381 25Ga0078894_105920212 26Ga0078894_113564102 27Ga0078894_114027901 28Ga0078894_117790912 29Ga0070743_101093722 30Ga0070744_100285354 31Ga0102880_11286012 32Ga0105746_13470231 33Ga0114340_10372256 34Ga0114341_100940562 35Ga0114346_10088802 36Ga0114346_12007051 37Ga0114841_100102314 38Ga0114336_10913962 39Ga0102831_10978592 40Ga0102911_12292362 41Ga0114978_1000867823 42Ga0114974_108088421 43Ga0114983_10462993 44Ga0114982_100013569 45Ga0114982_100026040 46Ga0114982_10723893 47Ga0136551_10014662 48Ga0137575_100381432 49Ga0157138_100025819 50Ga0157203_10182432 51Ga0157210_100097111 52Ga0181362_10634021 53Ga0211732_13271213 54Ga0211732_13678659 55Ga0211733_110297804 56Ga0211733_111876472 57Ga0211726_100979587 58Ga0211735_116084842 59Ga0211731_100431342 60Ga0208464_1011843 61Ga0208464_1052901 62Ga0208483_10065673 63Ga0208591_10210151 64Ga0208326_1031283 65Ga0208233_10373371 66Ga0207942_10253742 67Ga0208597_10425373 68Ga0222713_103974321 69Ga0222712_1000496534 70Ga0181351_10589342 71Ga0244775_107474462 72Ga0209616_10095021 73Ga0255106_10580252 74Ga0208444_10288542 75Ga0208558_10433641 76Ga0207994_10735222 77Ga0208437_10169813 78Ga0208966_100009219 79Ga0208133_10317972 80Ga0208133_11296292 81Ga0209356_10728822 82Ga0209357_11532431 83Ga0209769_10775262 84Ga0209769_12406622 85Ga0209599_1000020051 86Ga0209599_1000022576 87Ga0209599_100168162 88Ga0209599_100965971 89Ga0209617_100635073 90Ga0208305_102391351 91Ga0209444_100949861 92Ga0208671_102408361 93Ga0209500_1000805422 94Ga0209230_100359403 95Ga0209550_101430924 96Ga0209550_102459431 97Ga0315907_100041154 98Ga0315899_114206622 99Ga0315905_115621092 100Ga0315903_109223612 101Ga0335021_0002314_1_186 102Ga0335019_0000027_34713_34907 103Ga0335020_0003878_9644_9817 104Ga0335065_0024803_3133_3333 105Ga0335007_0778187_260_469
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72. 1ErSWdraft_9385570 2JGI12421J11937_100873603 3Ga0078894_117790912 4Ga0114974_108088421 5Ga0136551_10014662 6Ga0208233_10373371
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72. 1ErSWdraft_9385570 2JGI12421J11937_100873603 3Ga0078894_117790912 4Ga0114974_108088421 5Ga0136551_10014662 6Ga0208233_10373371
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.85% β-sheet: 19.70% Coil/Unstructured: 45.45%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF06067	DUF932	4.76
PF13640	2OG-FeII_Oxy_3	2.86
PF01555	N6_N4_Mtase	1.90
PF01464	SLT	1.90
PF08007	JmjC_2	0.95
PF14025	DUF4241	0.95
PF01391	Collagen	0.95
PF09956	DUF2190	0.95
PF04860	Phage_portal	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	1.90
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	1.90
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	1.90
COG2850	Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain	Translation, ribosomal structure and biogenesis [J]	0.95

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	41.90 %
Unclassified	root	N/A	58.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	9.52 %
Unclassified	root	N/A	58.10 %
Viruses	superkingdom	All Organisms → Viruses	32.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	9.52 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	12.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.05 %
Unclassified	root	N/A	58.10 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	12.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.05 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	9.52 %
Unclassified	root	N/A	58.10 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	9.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.05 %
Unclassified	root	N/A	58.10 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	12.38 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	12.38 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	9.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.05 %
Unclassified	root	N/A	58.10 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	9.52 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	9.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.05 %
Unclassified	root	N/A	58.10 %

Name	Rank	Taxonomy	Distribution
Aphanizomenonaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae	9.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.05 %
Unclassified	root	N/A	58.10 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9.52 %

Name	Rank	Taxonomy	Distribution
Aphanizomenon	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon	9.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.05 %
Unclassified	root	N/A	58.10 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9.52 %

Name	Rank	Taxonomy	Distribution
Aphanizomenon flos-aquae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae	9.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.05 %
Unclassified	root	N/A	58.10 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9.52 %

Name	Rank	Taxonomy	Distribution
Aphanizomenon flos-aquae WA102	isolate	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	9.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.05 %
Unclassified	root	N/A	58.10 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9.52 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2035265000\|ErSWdraf_F5BXKTZ02JF4YU	Not Available	515	Open in IMG/M
3300000756\|JGI12421J11937_10087360	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	884	Open in IMG/M
3300001282\|B570J14230_10043477	All Organisms → Viruses → Predicted Viral	1524	Open in IMG/M
3300002835\|B570J40625_100018112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	12110	Open in IMG/M
3300002835\|B570J40625_100047441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	6208	Open in IMG/M
3300002835\|B570J40625_100467548	All Organisms → Viruses → Predicted Viral	1197	Open in IMG/M
3300003413\|JGI25922J50271_10019188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1744	Open in IMG/M
3300003429\|JGI25914J50564_10030982	All Organisms → Viruses → Predicted Viral	1548	Open in IMG/M
3300003429\|JGI25914J50564_10074763	Not Available	868	Open in IMG/M
3300003430\|JGI25921J50272_10123647	Not Available	543	Open in IMG/M

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	92.38%
Terrestrial	Environmental → Terrestrial	7.62%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	7.62%
Freshwater	Environmental → Aquatic → Freshwater	76.19%
Marine	Environmental → Aquatic → Marine	16.19%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	0.95%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	7.62%
Lake	Environmental → Aquatic → Freshwater → Lake	20.00%
Lentic	Environmental → Aquatic → Freshwater → Lentic	45.71%
Lotic	Environmental → Aquatic → Freshwater → Lotic	2.86%
Pond	Environmental → Aquatic → Freshwater → Pond	1.90%
River	Environmental → Aquatic → Freshwater → River	0.95%
Unclassified	Environmental → Aquatic → Marine → Unclassified	7.62%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	7.62%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	4.76%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	12.38%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	7.62%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.95%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	32.38%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	20.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	7.62%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	7.62%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	4.76%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	7.62%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	7.62%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	5.71%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.90%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.95%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	11.43%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.67%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.76%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.81%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	2.86%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.95%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.95%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.95%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	0.95%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.95%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.95%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	27.62%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.86%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.86%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	5.71%
Pond Fresh Water	Environmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water	1.90%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2035265000	Freshwater microbial communities from Swedish Lakes - surface of Lake Erken	Environmental	Open in IMG/M
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003413	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD	Environmental	Open in IMG/M
3300003429	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN	Environmental	Open in IMG/M
3300003430	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD	Environmental	Open in IMG/M
3300003490	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN	Environmental	Open in IMG/M
3300004054	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (v2)	Environmental	Open in IMG/M
3300004096	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ErSWdraft_9385570	2035265000	Freshwater	MNTMTCKVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD
JGI12421J11937_100873603	3300000756	Freshwater And Sediment	MNTCKIINCESTELVYSGTDAFMLGGIPTETYCYKCANAYAQIDRVISKMREDYLASVSTSTTSC*
B570J14230_100434773	3300001282	Freshwater	MKTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQEYLDSLTPTSSFTTSD*
B570J40625_1000181122	3300002835	Freshwater	MNTMTCQVINCDSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQEYLDSLTPASSLTTSD*
B570J40625_1000474416	3300002835	Freshwater	MKCQVINCKSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD*
B570J40625_1004675482	3300002835	Freshwater	MRTCQVRNCTSTELVYSGTDAFLLGINTETYCYDCANTYAQIDRVMSKVRQDYLDSLTPSSTLTTSD*
JGI25922J50271_100191886	3300003413	Freshwater Lake	MRTCQIRNCTSTELVYSGTDAFMLGINTETYCYDCANTYAQIDRVMSKVRQDYLDSLTPVSSLTTSD*
JGI25914J50564_100309822	3300003429	Freshwater Lake	MNTMTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPASTLTTSD*
JGI25914J50564_100747631	3300003429	Freshwater Lake	MNTCQVINCESTELVYSGTDAFMLGINTEAYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSSLTTSD*
JGI25921J50272_101236471	3300003430	Freshwater Lake	MNTNTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD*
JGI25926J51410_10635761	3300003490	Freshwater Lake	MNTMKCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQINRVMSKVRQDYLDSLTPVSSLTTSD*
Ga0063232_102442262	3300004054	Freshwater Lake	MNTNTCKVINCDSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD*
Ga0066177_101647231	3300004096	Freshwater Lake	MNTNTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPAPTSTTSC*
Ga0066180_101979692	3300004128	Freshwater Lake	MNTNTCKVINCDSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPTSTLTTSD*
Ga0070374_101068511	3300005517	Freshwater Lake	MKCQVINCDSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPASTLTTSD*
Ga0070374_102139072	3300005517	Freshwater Lake	MNTMTCQVISCDSTELVYSGTDAFMLGINTETYCYNCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD*
Ga0070374_102813242	3300005517	Freshwater Lake	MNTMTCKVINCDSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD*
Ga0070374_104477601	3300005517	Freshwater Lake	MNTNTCKVINCDSTELVYSGTDAFMLGINTETYCYNCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD*
Ga0070374_105020292	3300005517	Freshwater Lake	MRTCQVRNCTSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQEYLDSLTPVSSLTTSD*
Ga0070374_105074301	3300005517	Freshwater Lake	MKTCQVINCESTELVYSGTDAFMLGINTETYCYNCANAYAQIDRVMSKVRQDYLDSLTPTSTLTTSD*
Ga0049085_101562731	3300005583	Freshwater Lentic	MNTMTCQVINCDSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD*
Ga0049082_100084255	3300005584	Freshwater Lentic	MNTMTCQVINCDSTELVYSGTDAFMLGINTETYCYNCANAYAQINRVMSKVRQDYLDSLTPVSSLTTSD*
Ga0078894_100617233	3300005662	Freshwater Lake	MKCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSSLTTSD*
Ga0078894_102988381	3300005662	Freshwater Lake	MTTCKVINCESTELVYSGTDAFMLGITTEEYCYKCANAYAQIDRVMSKLRQEYLDSLTPAPTSTTSC*
Ga0078894_105920212	3300005662	Freshwater Lake	MKCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSSLTT
Ga0078894_113564102	3300005662	Freshwater Lake	MNTNTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQEYLDSIATTSTTSC*
Ga0078894_114027901	3300005662	Freshwater Lake	MRTCQVRNCTSTELVYSGTDAFMLGINTETYCYDCANTYAQIDRVMSKVRQDYLDSVSTLTTSD*
Ga0078894_117790912	3300005662	Freshwater Lake	MRTCQVRNCTSTELVYSGTDAFMLGINTETYCYDCANTYAQIDAVMSKVRQDYLDSLSTSN*
Ga0070743_101093722	3300005941	Estuarine	MKCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQINRVMSKVRQDYLDSLTPVSTLTTSD*
Ga0070744_100285354	3300006484	Estuarine	MNTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRAMTKVREEYLASVSTLTTSD*
Ga0102880_11286012	3300007550	Estuarine	MTTCKVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRAMTKVREEYLASVSTLTTSD*
Ga0105746_13470231	3300007973	Estuary Water	KRDKQMKCQVINCESAELVYSGTDAFMLGINTETYCYNCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD*
Ga0114340_10372256	3300008107	Freshwater, Plankton	QVINCDSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQEYLDSLTPVSTLTTSD*
Ga0114341_100940562	3300008108	Freshwater, Plankton	MNTMTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD*
Ga0114346_10088802	3300008113	Freshwater, Plankton	MTTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRAMTKVREEYLASVSTLTTSD*
Ga0114346_12007051	3300008113	Freshwater, Plankton	DSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQEYLDSLTPVSTLTTSD*
Ga0114841_100102314	3300008259	Freshwater, Plankton	MTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD*
Ga0114336_10913962	3300008261	Freshwater, Plankton	MNTMTCQVINCDSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQEYLDSLTPVSTLTTSD*
Ga0102831_10978592	3300008996	Estuarine	MKCQVINCESTELVYSGTDAFMLGINTETYCYNCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD*
Ga0102911_12292362	3300009049	Estuarine	VINCDSTELVYSGTDAFMLGINTETYCYNCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD*
Ga0114978_1000867823	3300009159	Freshwater Lake	MTCQVINCESTELVYSGTDAFMLGITTEAYCYKCANAYAQIDRAMQKVREEYLSQVSASSLTTSD*
Ga0114974_108088421	3300009183	Freshwater Lake	MCKVIKCENTDLVYSGTDAFMLGIPTETYCYKCANAYAQIDRVMSKVREDYITSNATTSC
Ga0114983_10462993	3300009194	Deep Subsurface	MNCKVINCESTELVYSGTDAFMLGIPTETYCYKCANAYAQIDRVMSKVREDYLASVSTSTTSC*
Ga0114982_100013569	3300009419	Deep Subsurface	MNCKVINCESTELIYSGTDAFMLGIPTETYCYKCANAYAQIDRVMSKVREDYLASVSTSTTSC*
Ga0114982_100026040	3300009419	Deep Subsurface	MNTNTCKVINCDSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPPSTLTTSD*
Ga0114982_10723893	3300009419	Deep Subsurface	MNTCKVINCESTELVYSGTDAFMLGITTETYCYNCANAYAQIDRVMSKVREDYLASVSTSTTSC*
Ga0136551_10014662	3300010388	Pond Fresh Water	MKCKVIRCESTELVYSGTDAFMLGGIPTETYCYDCANAYNQISNGMARLLADTETTSTLTTSC*
Ga0137575_100381432	3300010970	Pond Fresh Water	MTTCKVINCESTELVYSGTDAFMLGGIPTETYCYKCANAYNQISNSMAIYLNDYVDTTSTTLTTSC*
Ga0157138_100025819	3300012352	Freshwater	MTQCKVINCESTELVYSGTDAFMLGGIPTETYCYKCANAYNQISNSMAIYLDNYVEPTSTTSC*
Ga0157203_10182432	3300012663	Freshwater	MKTCKVINCESTELVYSGTDAFMLGITTEEYCYKCANAYAQIDRVMSKVRQDYLDSLTPAPTSTTSC*
Ga0157210_100097111	3300012665	Freshwater	MNTKTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPTSTLTTSD*
Ga0181362_10634021	3300017723	Freshwater Lake	MTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSL
Ga0211732_13271213	3300020141	Freshwater	MNTNTCQVINCDSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD
Ga0211732_13678659	3300020141	Freshwater	MNTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRAMTKVREEYLASTLTTSD
Ga0211733_110297804	3300020160	Freshwater	MNTNTCQVINCDSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVS
Ga0211733_111876472	3300020160	Freshwater	MNTMTCQVINCDSTELVYSGTDAFMLGINTETYCYNCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD
Ga0211726_100979587	3300020161	Freshwater	MTCKVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD
Ga0211735_116084842	3300020162	Freshwater	MNTNTCQVINCDSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSSLTTSD
Ga0211731_100431342	3300020205	Freshwater	MNTNTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD
Ga0208464_1011843	3300020482	Freshwater	MTTCKVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRAMTKVREEYLASVSTLTTSD
Ga0208464_1052901	3300020482	Freshwater	MKTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQEYLDSLTPT
Ga0208483_10065673	3300020492	Freshwater	MKCQVINCKSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD
Ga0208591_10210151	3300020493	Freshwater	MNTMTCQVINCDSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQEYLDSLTPASSLTTSD
Ga0208326_1031283	3300020494	Freshwater	MKTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQEYLDSLTPTSSFTTSD
Ga0208233_10373371	3300020529	Freshwater	NCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRAMTKVREEYLASVSTSN
Ga0207942_10253742	3300020549	Freshwater	MTTCKVINCESTELVYSGTDAFMLGINTETYCYRCANAYAQIDRAMTKVREEYLASVSTS
Ga0208597_10425373	3300020562	Freshwater	MKCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD
Ga0222713_103974321	3300021962	Estuarine Water	MTTCKVINCDSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRAMTKVREEYLASTLTTSD
Ga0222712_1000496534	3300021963	Estuarine Water	MNTCKVINCESTELVYSGTDAFMLGITTEEYCYKCANAYAQIDRAMSKVREEYLSSTTTSTTSC
Ga0181351_10589342	3300022407	Freshwater Lake	MNTMTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPASTLTTSD
Ga0244775_107474462	3300024346	Estuarine	MKCQVINCESTELVYSGTDAFMLGINTETYCYNCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD
Ga0209616_10095021	3300025091	Freshwater	MRTCQVRNCTSTELVYSGTDAFLLGINTETYCYDCANTYAQIDRVMSKVRQDYLDSLTPSSTLTTSD
Ga0255106_10580252	3300027125	Freshwater	KCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVTSLTTSD
Ga0208444_10288542	3300027240	Estuarine	MNTNTCKVINCDSTELVYSGTDAFMLGINTETYCYNCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTS
Ga0208558_10433641	3300027258	Estuarine	NTCKTPRCESVELVYSGTDAFMLGINTETYCYNCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD
Ga0207994_10735222	3300027416	Estuarine	MNTNTCKVINCDSTELVYSGTDAFMLGINTETYCYNCANAYAQIDRVMSKVRQDYLDSLTPVSTLT
Ga0208437_10169813	3300027525	Estuarine	MNTNTCKVINCDSTELVYSGTDAFMLGINTETYCYNCANAYAQIDRVMSKVRQDYLDIRLGDTC
Ga0208966_100009219	3300027586	Freshwater Lentic	MTCQVINCDSTELVYSGTDAFMLGINTETYCYNCANAYAQINRVMSKVRQDYLDSLTPVSSLTTSD
Ga0208133_10317972	3300027631	Estuarine	MNTNTCKVINCDSTELVYSGTDAFMLGINTETYCYNCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD
Ga0208133_11296292	3300027631	Estuarine	MNTCQVINCESTELVYSGTDAFMLGINTETYCYNCANAYAQIDRVMSKVRQDYLDSLTPVST
Ga0209356_10728822	3300027644	Freshwater Lake	MTCQVINCDSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVS
Ga0209357_11532431	3300027656	Freshwater Lake	MNTMKCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQINRVMSKVRQDYLDSLTPVSSLTTSD
Ga0209769_10775262	3300027679	Freshwater Lake	MRTCQIRNCTSTELVYSGTDAFMLGINTETYCYDCANTYAQIDRVMSKVRQDYLDSLTPVSSLTTSD
Ga0209769_12406622	3300027679	Freshwater Lake	MTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPASTLTTSD
Ga0209599_1000020051	3300027710	Deep Subsurface	MNTNTCKVINCDSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPTSTLTTSD
Ga0209599_1000022576	3300027710	Deep Subsurface	MNCKVINCESTELVYSGTDAFMLGIPTETYCYKCANAYAQIDRVMSKVREDYLASVSTSTTSC
Ga0209599_100168162	3300027710	Deep Subsurface	MNTMTCQVINCDSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQEYLDSLTPSSTLTTSD
Ga0209599_100965971	3300027710	Deep Subsurface	MNTCKVINCESTELVYSGTDAFMLGITTETYCYNCANAYAQIDRVMSKVREDYLASVSTSTTSC
Ga0209617_100635073	3300027720	Freshwater And Sediment	MNTCKIINCESTELVYSGTDAFMLGGIPTETYCYKCANAYAQIDRVISKMREDYLASVSTSTTSC
Ga0208305_102391351	3300027753	Estuarine	MKCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQINRVMSKVRQDYLDSLTPVSTLTTSD
Ga0209444_100949861	3300027756	Freshwater Lake	MTCQVINCDSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD
Ga0208671_102408361	3300027757	Estuarine	CKVINCDSTELVYSGTDAFMLGINTETYCYNCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD
Ga0209500_1000805422	3300027782	Freshwater Lake	MNTMTCQVINCESTELVYSGTDAFMLGITTEAYCYKCANAYAQIDRAMQKVREEYLSQVSASSLTTSD
Ga0209230_100359403	3300027836	Freshwater And Sediment	MNTNTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVREDYLASQSSTSTTSA
Ga0209550_101430924	3300027892	Freshwater Lake	MNTNTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPTSTLTTSD
Ga0209550_102459431	3300027892	Freshwater Lake	MRTCQVRNCTSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQEYLDSLTPVSSLTTSD
Ga0315907_100041154	3300031758	Freshwater	MNTMTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD
Ga0315899_114206622	3300031784	Freshwater	INCDSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQEYLDSLTPVSTLTTS
Ga0315905_115621092	3300032092	Freshwater	MNTNTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQEYLDSIATTSTTSC
Ga0315903_109223612	3300032116	Freshwater	MNTKTCQVINCDSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQEYLDSLTPSSTLTTSD
Ga0335021_0002314_1_186	3300034023	Freshwater	MKTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQEYLDSLTPTSS
Ga0335019_0000027_34713_34907	3300034066	Freshwater	MTTCQVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRAMTKVREEYLASVSTLTTSD
Ga0335020_0003878_9644_9817	3300034082	Freshwater	STELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPVSTLTTSD
Ga0335065_0024803_3133_3333	3300034200	Freshwater	MKCQVINCKSTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQEYLDSLTPVSTLTTSD
Ga0335007_0778187_260_469	3300034283	Freshwater	MNTNTCKVINCESTELVYSGTDAFMLGINTETYCYKCANAYAQIDRVMSKVRQDYLDSLTPASTLTTSD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095473

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences