Metagenome / Metatranscriptome Family F095439

Basic Information
Family ID	F095439
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	74 residues
Representative Sequence	MHWLSIGLAVALGVCLLLALELLRRLRRRTSRDVEAQVAATVETLEARLDELARELSSAVSRAEEEAQRS
Number of Associated Samples	95
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	74.76 %
% of genes near scaffold ends (potentially truncated)	98.10 %
% of genes from short scaffolds (< 2000 bps)	95.24 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (52.381 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (9.524 % of family members)
Environment Ontology (ENVO)	Unclassified (32.381 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.429 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116. 1FE2_01291040 2AL16A1W_101865003 3JGI10216J12902_1181002852 4A21PFW6_10735571 5JGI25389J43894_10464412 6Ga0062593_1032551841 7Ga0062590_1013298552 8Ga0062592_1025538042 9Ga0066395_109437041 10Ga0070658_100407205 11Ga0070658_111469001 12Ga0070683_1014496301 13Ga0066388_1016664631 14Ga0066388_1083155591 15Ga0070682_1002568511 16Ga0070687_1001293591 17Ga0070675_1020156132 18Ga0070659_1008245071 19Ga0070667_1018508241 20Ga0066682_109293601 21Ga0073909_101312693 22Ga0066670_103552793 23Ga0066699_109088702 24Ga0068856_1018635411 25Ga0066905_1013385421 26Ga0066903_1025385953 27Ga0066903_1032147291 28Ga0068863_1017568722 29Ga0075281_10834431 30Ga0066651_104418652 31Ga0074047_118394272 32Ga0066659_114973961 33Ga0105245_106468743 34Ga0105242_133081801 35Ga0105248_119905662 36Ga0105237_108653513 37Ga0126374_101819081 38Ga0126373_129689021 39Ga0134082_105551521 40Ga0134064_102609721 41Ga0134062_107818431 42Ga0126378_111827793 43Ga0126377_106675973 44Ga0126379_130476841 45Ga0126379_134212671 46Ga0126381_1028419891 47Ga0134121_104132053 48Ga0134123_119108102 49Ga0105246_103964491 50Ga0137365_104236561 51Ga0137372_110258782 52Ga0157302_100349321 53Ga0157302_103579972 54Ga0126375_109902221 55Ga0164302_107596812 56Ga0164308_104781673 57Ga0164305_110980382 58Ga0157369_126687081 59Ga0120149_10493941 60Ga0157377_109291462 61Ga0120170_10463453 62Ga0137412_106001792 63Ga0132256_1008766613 64Ga0187786_102738051 65Ga0187785_102097693 66Ga0187779_109480301 67Ga0187777_109163631 68Ga0187777_114427931 69Ga0066667_111733931 70Ga0206353_108532201 71Ga0179594_103447971 72Ga0126371_109650943 73Ga0126371_136119261 74Ga0247676_10066081 75Ga0247692_10626831 76Ga0207699_109338572 77Ga0207705_106814361 78Ga0207654_106415892 79Ga0207654_107052011 80Ga0207660_109892791 81Ga0207687_108208131 82Ga0207644_110767472 83Ga0207661_105211533 84Ga0207667_108194833 85Ga0207677_101742541 86Ga0207702_107753353 87Ga0207702_114313681 88Ga0209238_10645821 89Ga0209474_100825731 90Ga0268264_106095203 91Ga0318534_108650651 92Ga0318538_106482381 93Ga0318561_105374341 94Ga0318554_108764241 95Ga0318546_113472942 96Ga0318523_104401272 97Ga0318564_105397801 98Ga0318511_100981923 99Ga0308174_105054543 100Ga0306926_112696141 101Ga0308176_101320661 102Ga0308176_105644723 103Ga0335082_1002101710 104Ga0335081_106652233 105Ga0373958_0032137_2_211
Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116. 1FE2_01291040 2AL16A1W_101865003 3JGI10216J12902_1181002852 4JGI25389J43894_10464412 5Ga0062593_1032551841 6Ga0062592_1025538042 7Ga0066395_109437041 8Ga0070658_111469001 9Ga0066388_1083155591 10Ga0066699_109088702 11Ga0075281_10834431 12Ga0066659_114973961 13Ga0126374_101819081 14Ga0134064_102609721 15Ga0126379_134212671 16Ga0157302_103579972 17Ga0187786_102738051 18Ga0187785_102097693 19Ga0187779_109480301 20Ga0187777_109163631 21Ga0187777_114427931 22Ga0206353_108532201 23Ga0209474_100825731 24Ga0308176_101320661 25Ga0308176_105644723 26Ga0335082_1002101710
Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70 1Ga0373958_0032137_2_211 2FE2_01291040 3JGI10216J12902_1181002852 4JGI25389J43894_10464412 5Ga0062593_1032551841 6Ga0066395_109437041 7Ga0066388_1016664631 8Ga0066388_1083155591 9Ga0066699_109088702 10Ga0066903_1025385953 11Ga0066903_1032147291 12Ga0075281_10834431 13Ga0074047_118394272 14Ga0066659_114973961 15Ga0126373_129689021 16Ga0134064_102609721 17Ga0126379_134212671 18Ga0134121_104132053 19Ga0137372_110258782 20Ga0157302_103579972 21Ga0126375_109902221 22Ga0164305_110980382 23Ga0120170_10463453 24Ga0137412_106001792 25Ga0187786_102738051 26Ga0187779_109480301 27Ga0187777_109163631 28Ga0187777_114427931 29Ga0247692_10626831 30Ga0207702_114313681 31Ga0209474_100825731 32Ga0318534_108650651 33Ga0318538_106482381 34Ga0318546_113472942 35Ga0308174_105054543 36Ga0306926_112696141 37Ga0308176_101320661 38Ga0308176_105644723 39Ga0335081_106652233
Powered by MSAViewer

Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.39% β-sheet: 0.00% Coil/Unstructured: 30.61%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
Powered by Feature Viewer

Structure Viewer
WebGL does not seem to be available. This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser. For a list of supported browsers, refer to http://caniuse.com/#feat=webgl. Load File(s)

Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
Powered by PDBe Molstar

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00164	Ribosom_S12_S23	64.76
PF00177	Ribosomal_S7	12.38
PF00009	GTP_EFTU	3.81
PF04156	Obsolete Pfam Family	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0049	Ribosomal protein S7	Translation, ribosomal structure and biogenesis [J]	12.38

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	47.62 %
Unclassified	root	N/A	52.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	47.62 %
Unclassified	root	N/A	52.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.62 %
Unclassified	root	N/A	52.38 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	5.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.90 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.76 %
Unclassified	root	N/A	52.38 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	5.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %
Unclassified	root	N/A	52.38 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.95 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.95 %
Unclassified	root	N/A	52.38 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4.76 %
Chelatococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae	0.95 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	5.71 %
Rhodocyclaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	0.95 %
Unclassified	root	N/A	52.38 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4.76 %
Chelatococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus	0.95 %
Dechlorobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Dechlorobacter	0.95 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	5.71 %
Unclassified	root	N/A	52.38 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4.76 %
Dechlorobacter hydrogenophilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Dechlorobacter → Dechlorobacter hydrogenophilus	0.95 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	5.71 %
Unclassified	root	N/A	52.38 %
unclassified Chelatococcus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → unclassified Chelatococcus	0.95 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4.76 %
Chelatococcus sp. GW1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → unclassified Chelatococcus → Chelatococcus sp. GW1	0.95 %
Croceitalea	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Croceitalea	5.71 %
Dechlorobacter hydrogenophilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Dechlorobacter → Dechlorobacter hydrogenophilus	0.95 %
Unclassified	root	N/A	52.38 %

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573003\|GZIR7W402GSAO3	Not Available	512	Open in IMG/M
3300000887\|AL16A1W_10186500	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300000956\|JGI10216J12902_118100285	Not Available	531	Open in IMG/M
3300001333\|A21PFW6_1073557	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300002916\|JGI25389J43894_1046441	Not Available	738	Open in IMG/M
3300004114\|Ga0062593_103255184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → unclassified Chelatococcus → Chelatococcus sp. GW1	521	Open in IMG/M
3300004157\|Ga0062590_101329855	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300004480\|Ga0062592_102553804	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300004633\|Ga0066395_10943704	Not Available	524	Open in IMG/M
3300005327\|Ga0070658_10040720	All Organisms → cellular organisms → Bacteria	3748	Open in IMG/M

Showing 1 to 10 of 103 entries

Previous1 2 3 4 5…11Next

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.24%
Host-Associated	Host-Associated	24.76%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	24.76%
Terrestrial	Environmental → Terrestrial	75.24%

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.10%
Soil	Environmental → Terrestrial → Soil	75.24%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.67%
Loam	Environmental → Terrestrial → Soil → Loam	11.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.62%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.52%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.67%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.95%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.95%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.81%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.95%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.95%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.90%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.81%

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573003	Grass soil microbial communities from Rothamsted Park, UK - FE2 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300000887	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-65cm-16A)- 1 week illumina	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001333	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-PF)- 6 month illumina	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M

Showing 1 to 10 of 95 entries

Previous1 2 3 4 5…10Next

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FE2_01291040	2189573003	Grass Soil	MHWSVIGLAVALGVLAVVALELGRRLRRRTSRQVEERVAETVQTLEARLEELAQELSSAVRRAEEETQRSRF
AL16A1W_101865003	3300000887	Permafrost	MHSLLIGLAVALGVCAVAALDLLRRLRRRTSRHVEEQVAATVQTLEARLDELAQELTSAVKRAE
JGI10216J12902_1181002852	3300000956	Soil	MHWTVIGLAIALGVCALVALELLRRLSRRPSQDGEAQVAATVEALEERLDELAQELSSAVGRAEEE
A21PFW6_10735571	3300001333	Permafrost	MHSLLIGLAVALGVCAVAALDLLRRLRRRTSRHVEEQVAATVQTLEARLDELAQE
JGI25389J43894_10464412	3300002916	Grasslands Soil	MHWLTIGLAIGLVVCVLLALELLRRLRRRSSRDVEAQVAATVESLEARLDELAQELGSAVSRAEQEAQRSRFLGQI
Ga0062593_1032551841	3300004114	Soil	MNWLSIGLAAALALCLLVALELLRRLRRRRSRDVEAQVTATIESLEVRLDELARELSSAVGRAEEEAQRSRFLGQIATTIDLDDALGSTL
Ga0062590_1013298552	3300004157	Soil	MHWLSIGLAVALGVCLLLVLELLRRLRRRSSRDVEAQVAATVETLEARLDELAHELSSAVSRAEEEAQRSRFLGQIAATIDLDDAIGSTL
Ga0062592_1025538042	3300004480	Soil	MHWLSIGLAVALGVCLLLVLELLRRLRRRSSRDVEAQVAATVETLEARLDELAHELSS
Ga0066395_109437041	3300004633	Tropical Forest Soil	MNWLSITLAAALGVSILVALELLRRVRQRHTRDVEAQVTATVATLEARLDELAQELSSAVSRAEEEAQRSRFFG
Ga0070658_100407205	3300005327	Corn Rhizosphere	MNWLSIGLAAALALCLLVALELLRRLRRRRSRDVEAQVTATIESLEVRLDELARELSSAVGRAEEEAQRSRFLGQIATTI
Ga0070658_111469001	3300005327	Corn Rhizosphere	MHTLVIVLAVALGVIAVVALVLLLRLRSRTSREVEEQVAATMETLEARLDELTQELTSAVRRAEEETRRSRFLAQIGTTID
Ga0070683_1014496301	3300005329	Corn Rhizosphere	MRWLSIGLAVALGVCLLLALELLRRLRRRTSRDVETQVAATVETLEARLDELAHELSSAVSRAEEEAQRS
Ga0066388_1016664631	3300005332	Tropical Forest Soil	MHWLTIGLAVALGVCLVLALELFRRLRRRKARDVEAQVTATVETLEARLDELARELSNAVRRAEEEAQRSRFLGQIATTIDLDDAIGS
Ga0066388_1083155591	3300005332	Tropical Forest Soil	MHWIVIGLAVALGVCLVVALELLRRLRRRTSEDADEQVTATVQTLEARLDELAQELTSAVRKAEEETQRSRFLAQIGATIDLDDALGSAL
Ga0070682_1002568511	3300005337	Corn Rhizosphere	MHWLSIGLALALGVCILLALELLRRLRRRHSRDVEAQVTATVEALEARLDELARELSSAVSRAEDEAQRSRFLGQIATTIDLDDA
Ga0070687_1001293591	3300005343	Switchgrass Rhizosphere	MRWLSIGLAVALGVCLLLALELLRRLRRRTSRDVETQVAATVETLEARLDELAHELSSAVSRAEEEAQRSRFLGQIAATIDLDDAIGSTLQAAAG
Ga0070675_1020156132	3300005354	Miscanthus Rhizosphere	MRWLSIGLAVALGVCLLLALELLRRLRRRTSRDVETQVAATVETLEARLDELAHELSS
Ga0070659_1008245071	3300005366	Corn Rhizosphere	MRWLSIGLAVALGVCLLLALELLRRLRRRTSRDVETQVAATVETLEARLDELAHELSSAVSRAEEEAQRSRFLGQIA
Ga0070667_1018508241	3300005367	Switchgrass Rhizosphere	MRWLSIGLAVALGVCLLLALELLRRLRRRTSRDVETQVAATVETLEARLDELAHELSSAVSRAEEEAQRSRFLGQIAATIDLDDAIGS
Ga0066682_109293601	3300005450	Soil	MHWLTIGLAIGLVVCVLLALELLRRLRRRSSRDVEAQVAATVESLEARLDELAQELGSAVSRAEEEAQRSRFLGQIATT
Ga0073909_101312693	3300005526	Surface Soil	MHWLSIGLAVALGVCLLLALELLRRLRRRTSRDVEAQVAATVETLEARLDELALELSSAVSRAEEEAQRSRFLGQ
Ga0066670_103552793	3300005560	Soil	MHWLTIGLAVALGVCVVLALELFRRLRRRPSRDVEAQVTATVETLEARLDELARELSSAV
Ga0066699_109088702	3300005561	Soil	LRAKTTESAASAMHSLSIGLAVALGVCAIVVLELVRRLRRRTSRHVEEQVTATVETLEARLDELAQELSSAVRKAEEEAQRSRFLGQIAATIDLDDAIGSTLEAAA
Ga0068856_1018635411	3300005614	Corn Rhizosphere	MNWLSIGLAAALVLCLLVALELLRRLRRRHSRDVEAQVTATVESLEARLDELARELSSAVSRAEEEA
Ga0066905_1013385421	3300005713	Tropical Forest Soil	MHWLTIGLAVALGVCILLALELMRRLRRRKSRDVEAQVTATVETLEARLDELARELSNAVSRAEEE
Ga0066903_1025385953	3300005764	Tropical Forest Soil	MHWLTIGLAVALGACVLLALELFRRLRRRRSRDAEAQVAATVEILEARLDELARELSDAVNRAEEEAQRSRFLGQIATTIDLDDAIG
Ga0066903_1032147291	3300005764	Tropical Forest Soil	MNWPSILLAAALGVFILLALELLRRLRSRHSRDVEEQVSATVATLEARLDELAQELSSA
Ga0068863_1017568722	3300005841	Switchgrass Rhizosphere	MHTLVIVLAVALGVVAVVALVLLLRLRSRTSREVEEQVAATMETLEARLDELTQELTSAVRRAEE
Ga0075281_10834431	3300005897	Rice Paddy Soil	MMHWLSIGLAVALGACILVALELVRRLRRRAARDVEAQVAATVETLEGRLDELARELSSAVSRAEAEAQRS
Ga0066651_104418652	3300006031	Soil	MHWLSIGLAVALGVCLLLALELLRRLRRRTSRDVEAQVAATVETLEVRLDELARELSSAVSRAEEEAQRSRFLGQIATTI
Ga0074047_118394272	3300006576	Soil	MHWLTIGLAIGLVVVALVALELLRRLRRRNSRDVEAQVTATVHTLEARLDELARELSRAVSRAEEEAQRSKFLGQIATTIDLDDAI
Ga0066659_114973961	3300006797	Soil	MHWLLIGLAAALGVCVLLALELLRRLRRRTSHDVEAQVTATVHTFEARLDQLAQELSTAVRSAEEETQRSRFLAQIGTTIDLDD
Ga0105245_106468743	3300009098	Miscanthus Rhizosphere	MNWLSIGLAAALALCLLVALELLRRLRRRRSRDVDAQVTATIESLEVRLDELARELSSAVGRAEEEAQRSRFLGQFATTIDLDDALGSTLQAAAGLPKV
Ga0105242_133081801	3300009176	Miscanthus Rhizosphere	MRWLSIGLAVALGVCLLLALELLRRLRRRTSRDVETQVAATVETLEARLDELAHELSSAVSRAEEEAQRSRFLGQIASTI
Ga0105248_119905662	3300009177	Switchgrass Rhizosphere	MHTLVIVLAVALGVGAVVALVLLLRLRSRTSREVEEQVAETMETLEARLDELTQELTSAVRRE
Ga0105237_108653513	3300009545	Corn Rhizosphere	MRWLSIGLAVALGVCLLLALELLRRLRRRTSRDVETQVAATVETLEARLDELAHELSSAVSRAEEEAQRSRFL
Ga0126374_101819081	3300009792	Tropical Forest Soil	VALGVCLVLALELFRRLRRRKARDVEAQVTATVETLEARLDELARELSNAVSRAEEEAQRSRFLGQIATTIDLDDAIGSTLQA
Ga0126373_129689021	3300010048	Tropical Forest Soil	MHWLSIGLAIALVICVLVALELLRRLRRRTSRDVEAQVTATVQTLETRLDELARELSSAVLRAEEEAQRSRFLGQIATTIDLE
Ga0134082_105551521	3300010303	Grasslands Soil	VALGVCVVLALELFRRLRRRPSRDVEAQVTATVETLEARLDELARELSSAVSRAEEEAQRSRFLGQIATTIDLDD
Ga0134064_102609721	3300010325	Grasslands Soil	MHWVSIGLAIALGICALVALELLRRLRRRNSREVEAQVTATVATLEVRLDALAQELSSAVSRAEEEAQRSRFFGQIAATIDLDDAIGSTLQAAAGLPK
Ga0134062_107818431	3300010337	Grasslands Soil	MHWLTIGLAIGLVVCVLLALELLRRLRRRSSRDVEAQVAATVESLEARLDELAQELGSAVSRAEQEAQR
Ga0126378_111827793	3300010361	Tropical Forest Soil	MHWLTIGLAIGLVVAALLALELLRRLRRRNSRDGEAQVTATVETLEARLDELARELSSAVTRAEE
Ga0126377_106675973	3300010362	Tropical Forest Soil	VALGVCVVLALELFRRLRRRKSRDVEAQVTATVETLEARLDELAQELSSAVRKAEEEAQRSRFLGQIATSIDLDDALGSTLQAA
Ga0126379_130476841	3300010366	Tropical Forest Soil	VALGVCLVLALELFRRLRRRKARDVEAQVTATVETLEARLDELARELSNAVRRAEEEAQRSRFLGQIATTIDLDDAIGSTLQAAAALPKV
Ga0126379_134212671	3300010366	Tropical Forest Soil	MHWIVIGLAVALGVSVVVALELLRRLRRRTAHDVEEQVTATVQTLELRLDELAQELSSAVRKAEEE
Ga0126381_1028419891	3300010376	Tropical Forest Soil	MHWLTIGLAVALGVCVVLALELFRRLRRRKSRDVEAQVTATVETLEARLDELARELSNAVSRAEEEAQRSRFLGQIAT
Ga0134121_104132053	3300010401	Terrestrial Soil	MHTLVIVLAVALGVVAVVALVLLLRLRSRTSREVEEQVAATMETLEARLDELTQELTSAVRRAEEETRRSRFLAQIGTT
Ga0134123_119108102	3300010403	Terrestrial Soil	MRWLSIGLAVALGVCLLLALELVRRLRRRTSRDVEAQVAATVETLEARLDELAHELSSAVSRAEEEAQRSRFLGQ
Ga0105246_103964491	3300011119	Miscanthus Rhizosphere	MRWLSIGLAVALGVCLLLALELLRRLRRRTSRDVETQVAATVETLEARLDELAHE
Ga0137365_104236561	3300012201	Vadose Zone Soil	MHSLSIILAAALGVCVLLALELLRRLRRRTSSDVEAQVTATVHTLEARLDELAQELSSAVRRAEKETQ
Ga0137372_110258782	3300012350	Vadose Zone Soil	MHSLSIILAAALGVCVLLALELLRRLRRRTSSDVEAQVTATVHTLEARLDELARELSSAVRRAEKETQRSRFLAQIGTTIDLDDAL
Ga0157302_100349321	3300012915	Soil	MRWLSIGLAVALGVCLLLALELLRRLRRRTSRDVETQVAATVETLEARLDEL
Ga0157302_103579972	3300012915	Soil	VALGVCALVALDLFRRLRGRNSRHVEEQVAATVETLEARLDELAQELGSAVKKAEEEAERNRLLGQIAATIDLDDAIGSTLQAAAALPNVDAAVVE
Ga0126375_109902221	3300012948	Tropical Forest Soil	MNWLSILLAAALGVSILVALELLRRLRQRHSRDVEEQVAATVATLETRLDELAQELSTAVSRAEEEAQRSRFLGQIATTIDLD
Ga0164302_107596812	3300012961	Soil	MHWLSIGLAVALGVCLLLALELLRRLRRRTSRDVEAQVAATVETLEARLDELALEL
Ga0164308_104781673	3300012985	Soil	MHWLSIGLAVALGVCLLLALELLRRLRRRTSRDVEAQVAATVETLEARLDELALELSSAVSRAEEE
Ga0164305_110980382	3300012989	Soil	MNWLTIGLAIGLVVLALLALELLRRLRRRNSRDVEAKVTATVQTLEARLDELARELSSAVSRAEDEAQRSRFLGQ
Ga0157369_126687081	3300013105	Corn Rhizosphere	MRWLSIGLAVALGVCLLLALELLRRLRRRTSRDVEAQVAATVETLETRLDELARE
Ga0120149_10493941	3300014058	Permafrost	MHSLLIGLAVALGVCAVAALDLLRRLRRRTSRHVEEQVAATVQTLEARLDEAP
Ga0157377_109291462	3300014745	Miscanthus Rhizosphere	MNWLSIGLAAALALCLLVALELLRRLRRRRSRDVEAQVTATIESLETRLDELARELSSAVGRAEEEAQRSRFLGQIATTIDLDDALGSTLQ
Ga0120170_10463453	3300014823	Permafrost	MHSLLIGLAVALGVCAVAALDLLRRLRRRTSRHVEEQVAATVQTLEARLDELAQELTSAVKRAEEETERSRFLAQIGTTIDLDDALG
Ga0137412_106001792	3300015242	Vadose Zone Soil	MHWVTIGLAIGLVVCAFLVLELLRRLRRRSSRDVEAQVTATVQTLEARLDELAQELSSAVSRAEEEAQRSRFLGQIATTIDL
Ga0132256_1008766613	3300015372	Arabidopsis Rhizosphere	MHWLSIGLAVALGACVLLALELLRRLRRRTSRDVEAQVAATVETLEARLDELARELSSAVSRAEEEAQR
Ga0187786_102738051	3300017944	Tropical Peatland	MQWLSIGLAVALGVCAIVAFELLRRLRRRTSHQAQVATTVETLEARVDELVQEVSTAVRRAEEE
Ga0187785_102097693	3300017947	Tropical Peatland	MHTLVIVLAVALGVCAVVALVLLLRLRSRTSREVEAQVNATVETLEARL
Ga0187779_109480301	3300017959	Tropical Peatland	MHWLSIGLAVALGVCAVMAFELMRRRRRRTSREDEAQVAATVETLEARLDELAQELGTAVRRAEEEAQRSRFLGQIATTIDLDDAIG
Ga0187777_109163631	3300017974	Tropical Peatland	MHWLSIGLAVALGICAVVVVELVRRLRRRTSREAEAQVSATVEMLEARLDELARDLSRAVRKAEEEVQRSR
Ga0187777_114427931	3300017974	Tropical Peatland	MHWLSIGLAVALGVCAVVAIELLRRLRRRSSREREAEVATTVETLEARVEELAQQLSAAVGHAEE
Ga0066667_111733931	3300018433	Grasslands Soil	MHWLSIGLAVALGVCLLLALELLRRLRRRTSRDVEAQVAATVETLEARLDELARELSSAVSRAEEEAQRSRFLGQIAATTDLDDAIGSTL
Ga0206353_108532201	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MNWLSIGLAAALALCLLVALELLRRLRRRRSRDVDAQVTATIESLEARLDELARELSSAVGRAEE
Ga0179594_103447971	3300020170	Vadose Zone Soil	MHWVTIGLAIGLVVCAFLVLELLRRLHRRSSRDVEAQVTATVQTLEARLDELAQELSSAVSRAEEEAQRSRFLGQIATTIDL
Ga0126371_109650943	3300021560	Tropical Forest Soil	MHWLEIALAVALVVCALVVLELLRRLRRNTSRDAEAQVAATVQTLEARLDELAQELSS
Ga0126371_136119261	3300021560	Tropical Forest Soil	MHWLTIGLAVALGACVLLALELFRRLRRRRSRDAEAQVAATVEILEARLDELARELS
Ga0247676_10066081	3300024249	Soil	MHWLTIGLAIGLVVCALLALELLRRLRRRNAHDVEVQVAATVETLEARLDELARELGSAVSRAEEEAQ
Ga0247692_10626831	3300024279	Soil	MHWLTIGLAIGLVVCALLALELLRRLRRRNAHDVEVQVAATVETLEARLDELARELGSAVSRAEEEAQRSR
Ga0207699_109338572	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MHWLTIGLAIGLVVCALLALELLRRLRRRNAHDVEVQVAATVETLEARLDELARELGSAV
Ga0207705_106814361	3300025909	Corn Rhizosphere	MNWLSIGLAAALALCLLVALELLRRLRRRRSRDVEAQVTATIESLEVRLDELARELSSAVGRAEEEAQRSRFLGQIATTID
Ga0207654_106415892	3300025911	Corn Rhizosphere	MHTLVIVLAVALGVVAVVALVLLLRLRSRTSREVEEQVAATMETLEARLDELTQELTSAV
Ga0207654_107052011	3300025911	Corn Rhizosphere	MNWLSIGLAAALALCLLVALELLRRLRRRRSRDVEAQVTATIESLEVRLDELARELSSAVGRAEEEAQRS
Ga0207660_109892791	3300025917	Corn Rhizosphere	MHWLSIGLALALGVCILLALELLRRLRRRHSRDVEAQVTATVEALEARLDELARE
Ga0207687_108208131	3300025927	Miscanthus Rhizosphere	MRWLSIGLAVALGVCLLLALELLRRLRRRTSRDVETQVAATVETLEARLDELAHELSSAVSRAEEEAQRSRFLGQIAATIDLDDAIGSTLQAATGLPK
Ga0207644_110767472	3300025931	Switchgrass Rhizosphere	MNWLSIGLAAALALCLLVALELLRRLRRRRSRDVEAQVTATIESLEVRLDELARELSSAVGRAEEEAQRSRFLGQIATTIDLDDALGS
Ga0207661_105211533	3300025944	Corn Rhizosphere	MRWLSIGLAVALGVCLLLALELLRRLRRRTSRDVETQVAATVETLEARLDELAHELSSAVSRAEEEAQRSRFLGQIAATIDLDDA
Ga0207667_108194833	3300025949	Corn Rhizosphere	MNWLSIGLAAALALCLLVALELLRRLRRRRSRDVEAQVTATIESLETRLDELARELSSAVGRAEEEAQRSRFLGQIATTIDLDDALGS
Ga0207677_101742541	3300026023	Miscanthus Rhizosphere	MRWLSIGLAVALGVCLLLALELLRRLRRRTSRDVETQVAATVETLEARLDELAHELSSAVSRAEEEAQRSRFLGQIAATIDLDDAIGSTLQAAAGL
Ga0207702_107753353	3300026078	Corn Rhizosphere	MNWLSIGLAAALALCLLVALELLRRLRRRRSRDVEAQVTATIESLEVRLDELARELS
Ga0207702_114313681	3300026078	Corn Rhizosphere	MNWLSILLAAALGVSVLLALELLRRLRRRDSRDVEEQVSATVATLEARLDELAQELGSAVRRAEEEAQRSRFLGQIAATIDLDDAIGSTLQAAAGLPK
Ga0209238_10645821	3300026301	Grasslands Soil	MHWLTIGLAIGLVVCVLLALELLRRLRRRSSRDVEAQVAATVESLEARLDELAQELGSAVSRAEQEAQRSRFLGQIATTIDLDDAIGS
Ga0209474_100825731	3300026550	Soil	MHTLIIGLAAALGLVVVAALEMFRRLRRQTSRDVETQVATTVQILESRLDDLAQELSGAVRKA
Ga0268264_106095203	3300028381	Switchgrass Rhizosphere	MRWLSIGLAVALGVCLLLALELLRRLRRRTSRDVETQVAATVETLEARLDELAHELSSAVSRAEEEAQRSRFLGQIAATIDLDDAIGSTLQAAAGLPKVDAA
Ga0318534_108650651	3300031544	Soil	MDWLTIGLAVALGVCVVVALELLRRLRRRRSRDAEAQVTATVETLEARLDELARELS
Ga0318538_106482381	3300031546	Soil	MHWLTIGLAVALGVCVLLALELLRRLRRRNSREVEAQVTATVETLEARLDELARELSNAV
Ga0318561_105374341	3300031679	Soil	MDWLVIGLVIALVVCVLVALELLRRLRRRSSRDVEAQVTATVQTLEARLDELASELSSAVSRAEE
Ga0318554_108764241	3300031765	Soil	MDWLVIGLVIALVVCVLVALELLRRLRRRSSRDVEAQVTATVQTLEARLDELASELSS
Ga0318546_113472942	3300031771	Soil	MHWLLIGLAVALGVCVVVALELLRRLRRRNAHDVEAQVTATVETLEARLDELARELSSAVRRAEEESQRSRFLGQIATTID
Ga0318523_104401272	3300031798	Soil	MDWLVIGLVIALVVCVLVALELLRRLRRRSSRDVEAQVTATVQTLEARLDELASELSSAVSRAEEEAQRSRFL
Ga0318564_105397801	3300031831	Soil	MDWLVIGLVIALVVCVLVALELLRRLRRRSSRDVEAQVTATVQTLEARLDELASELSSAVSRAEEEAQRSRFLGQIATTIDLD
Ga0318511_100981923	3300031845	Soil	MDWLVIGLVIALVVCVLVALELLRRLRRRSSRDVEAQVTATVQTLEARLDELASELSSAVSRAEEEAQRSRFLGQIATTIDLDDAIGSTLQ
Ga0308174_105054543	3300031939	Soil	MNWLPIVLAVALGVCALVVLELLRRLRRNTSRGAEAQVAATVQTLEARLDELAQELSSAVRKAEEEAQRSRFFGQIATTIDLDDA
Ga0306926_112696141	3300031954	Soil	MDWLVIGLVIALVVCVLVALELLRRLRRRSSRDVEAQVTATVQTLEARLDELASELSSAVSRAEEEAQRSRFLGQIATTID
Ga0308176_101320661	3300031996	Soil	VALGACVLVALELLRRLRRRHSRDAEAHVSATVETLEARLDELAQELSSAVRHAEEETERSRFLGQIATT
Ga0308176_105644723	3300031996	Soil	MHRLLIGLAVALGVCALVAFELLRRLRRRTARDVDAQVTATVQTLELRLDELAQE
Ga0335082_1002101710	3300032782	Soil	MQWLSIGLAVALGVCAIVAFELLRRLRRRASHDAEAQVATMGTLEARVDE
Ga0335081_106652233	3300032892	Soil	MHWLSIGLAIALVVCVLVAFELLRRLRRQSSHDVEAQVTATVQTLEARLDELARELSN
Ga0373958_0032137_2_211	3300034819	Rhizosphere Soil	MHWLSIGLAVALGVCLLLALELLRRLRRRTSRDVEAQVAATVETLEARLDELARELSSAVSRAEEEAQRS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095439

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences