Metagenome / Metatranscriptome Family F095390

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095390
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	47 residues
Representative Sequence	RAESEFSIRAEYYQQTFDERAPVPAGLQGLDLYPGLKAILVQIGWRF
Number of Associated Samples	79
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.95 %
% of genes near scaffold ends (potentially truncated)	97.14 %
% of genes from short scaffolds (< 2000 bps)	92.38 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.857 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.524 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.00% β-sheet: 26.67% Coil/Unstructured: 69.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF02424	ApbE	71.43
PF04072	LCM	4.76
PF03692	CxxCxxCC	2.86
PF13506	Glyco_transf_21	1.90
PF08241	Methyltransf_11	0.95
PF09351	DUF1993	0.95
PF07238	PilZ	0.95
PF03795	YCII	0.95
PF01292	Ni_hydr_CYTB	0.95
PF13174	TPR_6	0.95
PF02108	FliH	0.95
PF01569	PAP2	0.95
PF00300	His_Phos_1	0.95
PF11941	DUF3459	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1477	FAD:protein FMN transferase ApbE	Posttranslational modification, protein turnover, chaperones [O]	71.43
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	4.76
COG1317	Flagellar biosynthesis/type III secretory pathway protein FliH	Cell motility [N]	1.90
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	0.95
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.95
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	0.95
COG3038	Cytochrome b561	Energy production and conversion [C]	0.95
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	0.95
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.86 %
Unclassified	root	N/A	37.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.86 %
Unclassified	root	N/A	37.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.86 %
Unclassified	root	N/A	37.14 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	48.57 %
Unclassified	root	N/A	37.14 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	30.48 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.90 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	27.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.90 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	27.62 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	1.90 %
Roseiarcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae	1.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.95 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
unclassified Steroidobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae	27.62 %
Roseiarcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus	1.90 %
Lacipirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae	1.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Comamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas	0.95 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	27.62 %
Aeoliella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Aeoliella	1.90 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Comamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas	0.95 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	27.62 %
unclassified Aeoliella	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Aeoliella → unclassified Aeoliella	1.90 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Comamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas	0.95 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	27.62 %
Aeoliella sp. ICT_H6.2	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Aeoliella → unclassified Aeoliella → Aeoliella sp. ICT_H6.2	1.90 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Comamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas	0.95 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100278452	All Organisms → cellular organisms → Bacteria → Proteobacteria	1559	Open in IMG/M
3300004092\|Ga0062389_103982524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	555	Open in IMG/M
3300004152\|Ga0062386_100995100	Not Available	694	Open in IMG/M
3300005602\|Ga0070762_10514782	All Organisms → cellular organisms → Bacteria → Proteobacteria	786	Open in IMG/M
3300005995\|Ga0066790_10403566	All Organisms → cellular organisms → Bacteria → Proteobacteria	584	Open in IMG/M
3300006102\|Ga0075015_100709569	Not Available	597	Open in IMG/M
3300006162\|Ga0075030_100897445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	699	Open in IMG/M
3300006638\|Ga0075522_10349665	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300009500\|Ga0116229_10379927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1182	Open in IMG/M
3300009520\|Ga0116214_1161641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	836	Open in IMG/M
3300009523\|Ga0116221_1218533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	825	Open in IMG/M
3300009624\|Ga0116105_1245475	Not Available	508	Open in IMG/M
3300009683\|Ga0116224_10150105	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300009700\|Ga0116217_10931882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300010379\|Ga0136449_103263126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300010379\|Ga0136449_104526801	Not Available	511	Open in IMG/M
3300011120\|Ga0150983_13018842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	549	Open in IMG/M
3300011120\|Ga0150983_13150516	Not Available	827	Open in IMG/M
3300014158\|Ga0181521_10038628	All Organisms → cellular organisms → Bacteria → Proteobacteria	3472	Open in IMG/M
3300014159\|Ga0181530_10052008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2672	Open in IMG/M
3300014159\|Ga0181530_10546040	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300014164\|Ga0181532_10227488	Not Available	1081	Open in IMG/M
3300014501\|Ga0182024_11339561	Not Available	827	Open in IMG/M
3300014501\|Ga0182024_12737359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	526	Open in IMG/M
3300014654\|Ga0181525_10696989	Not Available	570	Open in IMG/M
3300014657\|Ga0181522_10884292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	550	Open in IMG/M
3300014838\|Ga0182030_10123602	All Organisms → cellular organisms → Bacteria → Proteobacteria	3430	Open in IMG/M
3300014838\|Ga0182030_10269907	All Organisms → cellular organisms → Bacteria	1917	Open in IMG/M
3300014838\|Ga0182030_11349108	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Aeoliella → unclassified Aeoliella → Aeoliella sp. ICT_H6.2	598	Open in IMG/M
3300015206\|Ga0167644_1026571	All Organisms → cellular organisms → Bacteria → Proteobacteria	2409	Open in IMG/M
3300018040\|Ga0187862_10791685	Not Available	550	Open in IMG/M
3300019240\|Ga0181510_1205156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	572	Open in IMG/M
3300019787\|Ga0182031_1162844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1226	Open in IMG/M
3300019787\|Ga0182031_1554709	Not Available	1216	Open in IMG/M
3300020021\|Ga0193726_1264570	Not Available	688	Open in IMG/M
3300020061\|Ga0193716_1098129	Not Available	1262	Open in IMG/M
3300020579\|Ga0210407_10141849	All Organisms → cellular organisms → Bacteria → Proteobacteria	1848	Open in IMG/M
3300020579\|Ga0210407_10264338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1341	Open in IMG/M
3300021170\|Ga0210400_10717510	Not Available	822	Open in IMG/M
3300021170\|Ga0210400_11507902	Not Available	533	Open in IMG/M
3300021180\|Ga0210396_11125522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	660	Open in IMG/M
3300021181\|Ga0210388_11151216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	660	Open in IMG/M
3300021401\|Ga0210393_10323445	Not Available	1254	Open in IMG/M
3300021404\|Ga0210389_10632375	Not Available	840	Open in IMG/M
3300021405\|Ga0210387_10374978	Not Available	1259	Open in IMG/M
3300021406\|Ga0210386_10179147	All Organisms → cellular organisms → Bacteria	1786	Open in IMG/M
3300021406\|Ga0210386_10800264	Not Available	810	Open in IMG/M
3300021407\|Ga0210383_10045621	All Organisms → cellular organisms → Bacteria → Proteobacteria	3654	Open in IMG/M
3300021407\|Ga0210383_10726845	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300021407\|Ga0210383_11040909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	693	Open in IMG/M
3300021420\|Ga0210394_10926793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	757	Open in IMG/M
3300021433\|Ga0210391_10159302	All Organisms → cellular organisms → Bacteria → Proteobacteria	1777	Open in IMG/M
3300021433\|Ga0210391_10460677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	998	Open in IMG/M
3300021433\|Ga0210391_10606027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	860	Open in IMG/M
3300021474\|Ga0210390_10210659	All Organisms → cellular organisms → Bacteria → Proteobacteria	1644	Open in IMG/M
3300021474\|Ga0210390_10283069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1404	Open in IMG/M
3300021474\|Ga0210390_10321793	All Organisms → cellular organisms → Bacteria → Proteobacteria	1310	Open in IMG/M
3300021474\|Ga0210390_11459795	Not Available	543	Open in IMG/M
3300021475\|Ga0210392_10700679	Not Available	754	Open in IMG/M
3300021475\|Ga0210392_11243386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas	557	Open in IMG/M
3300021475\|Ga0210392_11421208	Not Available	519	Open in IMG/M
3300021479\|Ga0210410_10248978	All Organisms → cellular organisms → Bacteria → Proteobacteria	1594	Open in IMG/M
3300021479\|Ga0210410_10931393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	756	Open in IMG/M
3300021559\|Ga0210409_10872970	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300022711\|Ga0242674_1018177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	802	Open in IMG/M
3300025679\|Ga0207933_1143560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	706	Open in IMG/M
3300026291\|Ga0209890_10024758	All Organisms → cellular organisms → Bacteria	2327	Open in IMG/M
3300027072\|Ga0208238_1022411	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300027496\|Ga0208987_1033595	Not Available	904	Open in IMG/M
3300027567\|Ga0209115_1001843	All Organisms → cellular organisms → Bacteria → Proteobacteria	3866	Open in IMG/M
3300027609\|Ga0209221_1019930	Not Available	1772	Open in IMG/M
3300027812\|Ga0209656_10499720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	531	Open in IMG/M
3300027889\|Ga0209380_10552558	Not Available	669	Open in IMG/M
3300027911\|Ga0209698_10806821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	709	Open in IMG/M
3300028800\|Ga0265338_10452248	Not Available	909	Open in IMG/M
3300028882\|Ga0302154_10523258	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300028906\|Ga0308309_11288057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	629	Open in IMG/M
3300029883\|Ga0311327_10598672	Not Available	663	Open in IMG/M
3300029915\|Ga0311358_10324639	Not Available	1289	Open in IMG/M
3300029922\|Ga0311363_11305073	All Organisms → cellular organisms → Bacteria → Proteobacteria	601	Open in IMG/M
3300029951\|Ga0311371_10106363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4445	Open in IMG/M
3300029952\|Ga0311346_11145037	Not Available	612	Open in IMG/M
3300029999\|Ga0311339_11495340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	602	Open in IMG/M
3300030051\|Ga0302195_10400408	Not Available	595	Open in IMG/M
3300030399\|Ga0311353_10268793	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300030399\|Ga0311353_10447279	Not Available	1154	Open in IMG/M
3300030509\|Ga0302183_10349559	Not Available	569	Open in IMG/M
3300030626\|Ga0210291_12007257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	506	Open in IMG/M
3300030740\|Ga0265460_12360339	Not Available	563	Open in IMG/M
3300031027\|Ga0302308_10714596	Not Available	566	Open in IMG/M
3300031128\|Ga0170823_12006618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	637	Open in IMG/M
3300031474\|Ga0170818_107228173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	593	Open in IMG/M
3300031524\|Ga0302320_10583628	Not Available	1314	Open in IMG/M
3300031525\|Ga0302326_12347259	Not Available	675	Open in IMG/M
3300031708\|Ga0310686_104518450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	628	Open in IMG/M
3300031708\|Ga0310686_106808039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	503	Open in IMG/M
3300031708\|Ga0310686_114531241	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300031823\|Ga0307478_10748704	Not Available	818	Open in IMG/M
3300031823\|Ga0307478_10962388	Not Available	714	Open in IMG/M
3300031823\|Ga0307478_11279837	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Aeoliella → unclassified Aeoliella → Aeoliella sp. ICT_H6.2	610	Open in IMG/M
3300032174\|Ga0307470_10852671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	711	Open in IMG/M
3300032515\|Ga0348332_10223760	Not Available	640	Open in IMG/M
3300032515\|Ga0348332_14732185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	527	Open in IMG/M
3300033887\|Ga0334790_137096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	749	Open in IMG/M
3300034124\|Ga0370483_0057839	Not Available	1232	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.10%
Host-Associated	Host-Associated	1.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.81%
Aquatic	Environmental → Aquatic	14.29%
Plants	Host-Associated → Plants	1.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.62%
Peat	Environmental → Terrestrial → Peat	14.29%
Freshwater	Environmental → Aquatic → Freshwater	11.43%
Sediment	Environmental → Aquatic → Sediment	2.86%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.95%
Peat Moss	Host-Associated → Plants → Peat Moss	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.52%
Loam	Environmental → Terrestrial → Soil → Loam	9.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.86%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.95%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.24%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.43%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.52%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.86%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.90%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.67%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.71%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.71%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.76%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	4.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.86%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.86%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.90%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.90%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.95%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.95%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.95%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.95%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.95%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300019240	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025679	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027072	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF013 (SPAdes)	Environmental	Open in IMG/M
3300027496	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030626	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE110SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1002784523	3300002245	Forest Soil	LPGLGSRPESEISIRAEYYQQTFDERVPVPAGLQGLDLYPGLKAVLVQIGWRF*
Ga0062389_1039825241	3300004092	Bog Forest Soil	AFHALTYGLKYAQKLPGLGGRAESEFSVRAEYYQQTFDERMAVPAALSGLDLYPGLKAVMVQVGWRF*
Ga0062386_1009951001	3300004152	Bog Forest Soil	QGNHVGSEFSARVEYYQQIFDETAPVPAGLRGLDLYPELKAILVQIGWRF*
Ga0070762_105147822	3300005602	Soil	SVRAEYYQQTYNVRVPAPAGLQGLDLYPGLNAILVQVGWRF*
Ga0066790_104035661	3300005995	Soil	EFSVRLEYYQQIQDHRVAAPELLQGLDLYPGLKAILVQFGWRF*
Ga0075015_1007095692	3300006102	Watersheds	EYYQENFNERMPVPAGLQGLDLFPGLKAVLVQFGFRY*
Ga0075030_1008974451	3300006162	Watersheds	PDGSELSVRAEYYRQTQDHQVPGPGVLAGLDLYPGLTAILVSVEWRWKY*
Ga0075522_103496651	3300006638	Arctic Peat Soil	QQTFDNRIPGPGVLQGLDLYPGLKAILVQVGFSY*
Ga0116229_103799272	3300009500	Host-Associated	PYRFLPSSEFNVRVEYYQQTFSERQAVPQALRGLDLYPGLKAILVQVGWRF*
Ga0116214_11616411	3300009520	Peatlands Soil	HVGSEFSARVGYYRQTYDVTVPVPASLQGLDLYPDLKAILVQIGWRF*
Ga0116221_12185331	3300009523	Peatlands Soil	EYYQQTFFNKLPAPAALQGLDLYPGLRAILLQVGFSY*
Ga0116105_12454752	3300009624	Peatland	RAESEFSIRAEYYQQTFDERAPVPAGLQGLDLYPGLKAILVQIGWRF*
Ga0116224_101501052	3300009683	Peatlands Soil	MLKYAEQLADQGNHVGSEFSARVEYYRQTYDVTVPVPASLQGLDLYPDLKAILVQIGWRF
Ga0116217_109318822	3300009700	Peatlands Soil	SEISVRAEYYRQTFNEGVAVPAGLQGLDLYPGLEAILVQLGWRF*
Ga0136449_1032631262	3300010379	Peatlands Soil	YGVKFAQKLAGHGDGTGSEISVRAEYYRQTFNEGAAVPAGLQGLDLYPGLEAILVQVGWRF*
Ga0136449_1045268012	3300010379	Peatlands Soil	EYYQQTFDERMPAIAGLQGLDLYPGLKGFLVQIGWRF*
Ga0150983_130188422	3300011120	Forest Soil	ALTYGVKYAQKLPGLGSRAESEFSVRAEYYQQTFNEHVPVPVGLEGLDLYPGLKAILVQIGYRF*
Ga0150983_131505162	3300011120	Forest Soil	AESEFSVRAEYYQQTLIERTPVPASLQGIDLYPGVKAILVQVGWRF*
Ga0181521_100386285	3300014158	Bog	VRAEYYQQTFDERMAAPAGLQGLDLYPGLKAFLVQIGWRF*
Ga0181530_100520081	3300014159	Bog	RAESEFSVRAEYYQQTFDERMAAPAGLQGLDLYPGLKAFLVQIGWRF*
Ga0181530_105460402	3300014159	Bog	RAESEFSVRAEYYQQTFDERMAAPAGLQGLDLYPGLKAFLAQIGWRF*
Ga0181532_102274882	3300014164	Bog	HVGSEFSARVEYYQQIFDETVPAPAGLRGLDLYPDLKAILVQIGWRF*
Ga0182024_113395611	3300014501	Permafrost	TYGLKFAQRLPGIGGRAESEFSVRAEYYQQTLVERTPVPASLQGLDLFPGVKAILVQIGWRF*
Ga0182024_127373592	3300014501	Permafrost	LGGRSESEFTIRAEYYQQTFDERMPVPAGLQGLDLYPGLKAILVQIGWRF*
Ga0181525_106969892	3300014654	Bog	RLEYYQQTLDIRSSVPAALQGLDLYPGLKAVLVQFGFSY*
Ga0181522_108842921	3300014657	Bog	SEISIRAEYYQQTFQEQVPIPAGLQGLDLYPGLKAVLVQIGWRF*
Ga0182030_101236025	3300014838	Bog	PGLGSRAESEFSVRAEYYQQTFAEQVPVPAGLRGLDLYPGLKAILVQLGYRF*
Ga0182030_102699073	3300014838	Bog	MSCVRAEYYQQSVDERMAVPAFLQTLDLYPGLKAILVQV*
Ga0182030_113491081	3300014838	Bog	LGSRAESEFSVRAEYYQQTFNEQMPVPASLQGLDLYPGLKAILVQIGYRF*
Ga0167644_10265711	3300015206	Glacier Forefield Soil	AGSEFSVRLEYYQQIQDHRLAAPEPLQGLDLYPGLKAILVQFGWRF*
Ga0187862_107916851	3300018040	Peatland	LGSRAESEFSVRAEYYQQTFDERMAAPAGLQGLDLYPGLKAFLVQIGWRF
Ga0181510_12051561	3300019240	Peatland	AEYYQQTFDERAPVPAGLQGLDLYPGLKAILVQIGWRF
Ga0182031_11628441	3300019787	Bog	PGLGSRAQKLPGLGSRAESEISIRAEYYQQTFNERLPVPAGLQGLDLYPGLKAVLVQIGWRF
Ga0182031_15547091	3300019787	Bog	FSVRAEYYQQTLDVRTQVPGVLQGLDLYPGLKAVLVQVGWRF
Ga0193726_12645702	3300020021	Soil	PGSEFSVRLEYYQQTFNQPSVPTALQGLDLLPPLKSILVQVGWRY
Ga0193716_10981293	3300020061	Soil	SEFSVRLEYYQQIQDHRLAAPALLQGLDLYPGLRAILAQFGWRF
Ga0210407_101418494	3300020579	Soil	FSVRAEYYQETFNEHVPVPAGLQGLDLYPSLKAILVQFGWRF
Ga0210407_102643381	3300020579	Soil	FHALTYGVKYAWKTSGPGGRESEFSVRAEYYQQTFDVRMPTPAALQGLDLYPGLKAVLVQIGWRF
Ga0210400_107175101	3300021170	Soil	YLQTLDIRTSVPAALQGLDLYPGLKAVLVQFGFSY
Ga0210400_115079021	3300021170	Soil	YGLKYAQKVHRSGGRNESEFSVRVEYYQQTFNERLAVPAALQGLDLYPGLKAVLVQVGWR
Ga0210396_111255221	3300021180	Soil	PGGRESEFSVRAEYYQQTFDVRMPTPAALQGLDLYPGLKAVLVQIGWRF
Ga0210388_111512162	3300021181	Soil	SRADSEFSVRAEYYQQTLDVRTPVPAALQGLDLYPGVKAILVQIGWRF
Ga0210393_103234452	3300021401	Soil	LPGLGSRPESEISIRAEYYQQTLDVRTPVPQALQGLDLYPGVKAVLVQIGWRF
Ga0210389_106323751	3300021404	Soil	EYYQQIQDHRLAAPVLLQNLDLYPGLKAILVQFGWRF
Ga0210387_103749783	3300021405	Soil	RAEYYQETFNEHVPVPAGLQGLDLYPSLKAILVQFGWRF
Ga0210386_101791471	3300021406	Soil	GSRPESEISIRAEYYQQTLDVRTPVPQALQGLDLYPGVKAVLVQIGWRF
Ga0210386_108002642	3300021406	Soil	LEYYQQIQDHRLAAPVLLQNLDLYPGLKAILVQFGWRF
Ga0210383_100456211	3300021407	Soil	GGRESEFSVRAEYYQQTFDLRMPTPAALQGLDLYPGLKAVLVQIGWRF
Ga0210383_107268451	3300021407	Soil	YYQQTYNVRMPVPAGLQGLDLYPGLNAILVQVGWRF
Ga0210383_110409091	3300021407	Soil	EFSVRAEYYQQTFDVRMPTPAALQGLDLYPGLKAVLVQIGWRF
Ga0210394_109267932	3300021420	Soil	HALTYGVKYAWKMPGPGGRESELSVRAEYYQQTFDERMPAPAALQGLDLYPGLKAILVQVGWRF
Ga0210391_101593024	3300021433	Soil	AEYYQQTLDVRTPVPQALQGLDLYPGVKAVLVQIGWRF
Ga0210391_104606772	3300021433	Soil	RESEFSVRAEYYQQTFDVRMPTPAALQGLDLYPGLKAVLVQIGWRF
Ga0210391_106060272	3300021433	Soil	GGRAESEFSIRAEYYQQTFDERMAVPAGLQGLDLYPGLKAVLIQIGWKF
Ga0210390_102106591	3300021474	Soil	YGVKYAQKLPGLGNRPESEISVRAEYYQQTFNERVPVPAGLQGLDLYPALKAVLVQIGYR
Ga0210390_102830691	3300021474	Soil	KYAHTLPGLGSRPESELNIRAEYYQQTLEERRPVPVGLQGLDLYPGLKAILVQIGWRF
Ga0210390_103217933	3300021474	Soil	AEYYQQTFNEHVPVPAGLQGLDLYPGLKAILVQIGYRF
Ga0210390_114597952	3300021474	Soil	YGVKYAQKLPGLGSRAESEFSIRAEYYQQTLDVRTPVPDALRGLDLYPGIKAVLVQIGWR
Ga0210392_107006791	3300021475	Soil	LPGFGGRAESEFSVRAEYYQETFNEHVPVPAGLQGLDLYPSLKAILVQFGWRF
Ga0210392_112433862	3300021475	Soil	EISIRAEYYQQTFNERLAVPTDLRGLDLYPGLKAILVQLGWRF
Ga0210392_114212082	3300021475	Soil	FHALTYGVKYAQKLPGLGSRPESEISIRAEYYQQTLEEHVPVPAGLQGLDLYPGLKAFLVQVGWRF
Ga0210410_102489781	3300021479	Soil	GGRAESEFSIRAEYYQQTFNERVPVPASLQGLDLYPGLKAILVQIGYRF
Ga0210410_109313932	3300021479	Soil	LTYGVKYAQKLPGVGGRSESEFSIRAEYYQQTFDERMPVPAGLQGLDLYPGLKAILVQIGWRF
Ga0210409_108729702	3300021559	Soil	YQQTYNVRMPVPAGLQGLDLYPGLNAILVQVGWRF
Ga0242674_10181771	3300022711	Soil	RAESEFSVRAEYYQQTFNVQVPVPAGLQGLDLYPGLKAILVQIGYRF
Ga0207933_11435601	3300025679	Arctic Peat Soil	GSRAESKFSVRAEYYQQTFDEHVPVPAGLQGLDLYPALKAVLVQIGRRF
Ga0209890_100247581	3300026291	Soil	SVRLEYYQQIQDRRLAAPELLQNLDLYPGLKAILVQFGWRF
Ga0208238_10224111	3300027072	Forest Soil	SIRAEYYQQTLDVRTPVPQALQGLDLYPGVKAVLVQIGWRF
Ga0208987_10335951	3300027496	Forest Soil	FSVRLEYYQQIQDHRLAAPVLLQNLDLYPGLKAILVQFGWHF
Ga0209115_10018435	3300027567	Forest Soil	GSEFSVRLEYYQQTQDHRLAAPVLLQNLDLYPGLKAILVQFGWRF
Ga0209221_10199303	3300027609	Forest Soil	KLPGLGSRAESEFSVRAEYYQQTFNEHVPVPTSLQGLDLYPGLKAILVQLGYRF
Ga0209656_104997202	3300027812	Bog Forest Soil	LAGHGDGTGSEISVRAEYYRQTFNERMAVPAGLQGLDLYPGLEAILVQVGWRF
Ga0209380_105525581	3300027889	Soil	RPESEISIRAEYYQQTLDVRTPVPQALQGLDLYPGVKAVLVQIGWRF
Ga0209698_108068211	3300027911	Watersheds	PDGSELSVRAEYYRQTQDHQVPGPGVLAGLDLYPGLTAILVSVEWRWKY
Ga0265338_104522481	3300028800	Rhizosphere	KYAQKLPGLGSRADSEISIRAEYYQQTLDVRTPVPEPLQGLDLYPGVKAVLVQVGWRF
Ga0302154_105232581	3300028882	Bog	RPESEISIRAEYYQQTLDVRTPVPEALQGLDLYPGLKAVLVQIGWRF
Ga0308309_112880571	3300028906	Soil	VKYAQKLPGLGSRAESEFSVRAEYYQQTFNEHVPVPVGLEGLDLYPGLKAILVQIGYRF
Ga0311327_105986722	3300029883	Bog	YQQTLDVRTPVPEALQGLDLYPGLKAVLVQVGWRF
Ga0311358_103246393	3300029915	Bog	EYYQQTLDVRTPVPEALQGLDLYPGLKAVLVQVGWRF
Ga0311363_113050732	3300029922	Fen	QKLPGLGSRSESEFSIRAEYYQQTFDDRMAVPAGLEGLDLYPGLKAILVQVGWRF
Ga0311371_101063635	3300029951	Palsa	GSRPESEISVRAEYYQQTFDERAAVPSGLQGLDLYPDLKAFLVQIGWRF
Ga0311346_111450372	3300029952	Bog	LEYYQQTFDERVAAPAGLQGLDLFPGLKAVLVQFGYRF
Ga0311339_114953402	3300029999	Palsa	PESEISVRAEYYQQTFDERVSVPAGLQGLDLYPGLKAILVQIGWQF
Ga0302195_104004082	3300030051	Bog	SVRAEYYQQTFNEQVSVPASLQGLDLYPGLKAILVQIGYRF
Ga0311353_102687933	3300030399	Palsa	EISIRAEYYEQTLDVRTPVPEALQGLDLYPGVKAVLVQIGWRF
Ga0311353_104472791	3300030399	Palsa	PGLGSRPESEISIRAEYYQQTLDVRTPVPQALQGLDLYPGVKAVLVQIGWRF
Ga0302183_103495592	3300030509	Palsa	SIRAEYYEQTLDVRTPVPEALQGLDLYPGVKAVLVQIGWRF
Ga0210291_120072571	3300030626	Soil	AQKLPGLGSRAESEFSVRAEYYQQTFSERMAVPAALQGLDLYPGLKAILVQVGWRF
Ga0265460_123603391	3300030740	Soil	SVRAEYYQQTLVERTPVPASLQGLDLFPGVKAVLVQIGWRF
Ga0302308_107145962	3300031027	Palsa	QKLPGLGSRPESEISIRAEYYQQTLDVRTPVPQALQGLDLYPGVKAVLVQIGWRF
Ga0170823_120066181	3300031128	Forest Soil	SVRAEYYQQTFNEQVPVPASLQGLDLYPGLKAILVQIGYRF
Ga0170818_1072281731	3300031474	Forest Soil	EYYQQTIDERVPVPAGLQGLDLYPGLKAVLVQIGWRF
Ga0302320_105836281	3300031524	Bog	KYAQKLPGLGSRQESELSIRAEYYQQTFDGHLPVPAGLQGLDLYPGLKAVLVQIGWRF
Ga0302326_123472592	3300031525	Palsa	GLKYAQKLPGLGSRPESEISIRAEYYEQTLDVRTPVPEALQGLDLYPGVKAVLVQIGWRF
Ga0310686_1045184502	3300031708	Soil	RAEYYQQTFDERVPTPAGLQGLDLYPGLKAVLVQIGWRF
Ga0310686_1068080391	3300031708	Soil	SIRAEYYQQTLDVRTPVPAALQGLDLYPGVKAILVQIGWRF
Ga0310686_1145312411	3300031708	Soil	YQQTFNERVPVPTDLQGLDLYPGLKAILVQIGYRF
Ga0307478_107487041	3300031823	Hardwood Forest Soil	SEFSVRAEYYQETFNQPAAVPAGLQGLDLLPALKSVLVQFGYSF
Ga0307478_109623881	3300031823	Hardwood Forest Soil	TPLRGCGLRSGAESEFSVRAEYYQETFNQPVAVPAGLQGLDLLPALKAVLVQFGYSF
Ga0307478_112798372	3300031823	Hardwood Forest Soil	RPESEISVRAEYYQQTFNERVPVPAGLQGLDLYPALKAVLVQIGYRF
Ga0307470_108526711	3300032174	Hardwood Forest Soil	PGLGSRAESEFSVRAEYYQQTFNERVPVPAGLQGLDLYPGLKAILVQIGYRF
Ga0348332_102237602	3300032515	Plant Litter	YQQTLDIRSAVPTALQGLDLYPGLKAVLVQFGFSY
Ga0348332_147321851	3300032515	Plant Litter	AWKTSGPGGRESEFSVRAEYYQQTFDVRMPTPAALQGLDLYPGLKAVLVQIGWRF
Ga0334790_137096_1_111	3300033887	Soil	YYQQTFDERAPLPAGLQGLDLYPGLKAILVQIGWRF
Ga0370483_0057839_1091_1225	3300034124	Untreated Peat Soil	MSCVRAEYYQQSVDERMAVPAFLQTLDLYPGLKAILLLQVGWRF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095390

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences