Metagenome / Metatranscriptome Family F095377

Overview

Basic Information

• Family ID: F095377
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 105
• Average Sequence Length: 48 residues
• Representative Sequence: MVKKIGLFWYLVNAPGGAFHGIPWPTKADADEILRAVLAQQDKAAPC
• Number of Associated Samples: 71
• Number of Associated Scaffolds: 105

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 82.86 %
• % of genes near scaffold ends (potentially truncated): 25.71 %
• % of genes from short scaffolds (< 2000 bps): 64.76 %
• Associated GOLD sequencing projects: 65
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (82.857 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (20.952 % of family members)
• Environment Ontology (ENVO): Unclassified (56.190 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline) (50.476 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: Yes
• Secondary Structure distribution:
  α-helix: 36.00%
  β-sheet: 0.00%
  Coil/Unstructured: 64.00%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00805	Pentapeptide	4.76
PF02767	DNA_pol3_beta_2	2.86
PF13884	Peptidase_S74	0.95
PF03237	Terminase_6N	0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	4.76
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	2.86

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.86 %
All Organisms	root	All Organisms	17.14 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.86 %
Viruses	superkingdom	All Organisms → Viruses	12.38 %
cellular organisms	root	All Organisms → cellular organisms	4.76 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.86 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	6.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.76 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.86 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	6.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.86 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.86 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	6.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.90 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.86 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	6.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.71 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	1.90 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.86 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	6.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.71 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.90 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.86 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.71 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.90 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.86 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.71 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	1.90 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.86 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.71 %
Pseudomonas sp. SID14000	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. SID14000	1.90 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300002408|B570J29032_109399071	Not Available	737
3300002408|B570J29032_109564618	Not Available	878
3300002835|B570J40625_100880527	Not Available	777
3300004240|Ga0007787_10005555	Not Available	4794
3300004481|Ga0069718_15493040	Not Available	3059
3300005525|Ga0068877_10004593	Not Available	10743
3300005581|Ga0049081_10057169	Not Available	1473
3300005582|Ga0049080_10031286	Not Available	1858
3300005805|Ga0079957_1010931	Not Available	6826
3300005805|Ga0079957_1053809	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2443
3300005805|Ga0079957_1070928	All Organisms → Viruses → Predicted Viral	2012
3300005805|Ga0079957_1076165	All Organisms → Viruses → Predicted Viral	1916
3300006030|Ga0075470_10147513	Not Available	688
3300006639|Ga0079301_1060996	Not Available	1203
3300006641|Ga0075471_10259542	Not Available	892
3300006802|Ga0070749_10054930	All Organisms → cellular organisms → Bacteria	2415
3300007212|Ga0103958_1164128	Not Available	2556
3300007214|Ga0103959_1261655	All Organisms → cellular organisms → Bacteria	1352
3300007216|Ga0103961_1317113	All Organisms → Viruses → Predicted Viral	1041
3300007544|Ga0102861_1002843	Not Available	3822
3300007544|Ga0102861_1007357	Not Available	2579
3300007600|Ga0102920_1091643	Not Available	964
3300007606|Ga0102923_1133224	Not Available	778
3300007618|Ga0102896_1093577	Not Available	981
3300007972|Ga0105745_1142666	Not Available	729
3300007992|Ga0105748_10422521	Not Available	577
3300008111|Ga0114344_1000149	Not Available	36563
3300008266|Ga0114363_1009662	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4633
3300008266|Ga0114363_1078969	Not Available	1232
3300008266|Ga0114363_1115044	Not Available	944
3300010370|Ga0129336_10459352	Not Available	690
3300011268|Ga0151620_1270091	Not Available	502
3300013004|Ga0164293_10266837	Not Available	1201
3300017707|Ga0181363_1002840	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3932
3300017707|Ga0181363_1051431	Not Available	737
3300017747|Ga0181352_1011269	Not Available	2883
3300017747|Ga0181352_1013629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. SID14000	2595
3300017747|Ga0181352_1182021	Not Available	545
3300017747|Ga0181352_1185006	Not Available	540
3300017754|Ga0181344_1037811	Not Available	1462
3300017754|Ga0181344_1071041	Not Available	1026
3300017754|Ga0181344_1110713	Not Available	794
3300017754|Ga0181344_1172950	Not Available	612
3300017785|Ga0181355_1158218	Not Available	911
3300020159|Ga0211734_11153202	Not Available	2288
3300020160|Ga0211733_10775096	Not Available	5719
3300020535|Ga0208228_1059114	Not Available	562
3300020549|Ga0207942_1005596	Not Available	1807
3300021438|Ga0213920_1014675	Not Available	2118
3300021963|Ga0222712_10728522	Not Available	555
3300022179|Ga0181353_1000827	Not Available	6046
3300022179|Ga0181353_1000993	Not Available	5582
3300022179|Ga0181353_1004019	Not Available	3354
3300022179|Ga0181353_1024176	Not Available	1605
3300022179|Ga0181353_1031252	All Organisms → Viruses → Predicted Viral	1410
3300022179|Ga0181353_1078843	Not Available	833
3300022179|Ga0181353_1106686	Not Available	683
3300022179|Ga0181353_1124614	Not Available	613
3300024276|Ga0255205_1015973	Not Available	1263
3300024343|Ga0244777_10869044	Not Available	528
3300024348|Ga0244776_10694323	Not Available	629
3300024487|Ga0255222_1071212	Not Available	529
3300024492|Ga0255189_1003840	All Organisms → Viruses → Predicted Viral	2016
3300024511|Ga0255196_1036345	Not Available	714
3300024512|Ga0255186_1011454	Not Available	1210
3300025585|Ga0208546_1091200	Not Available	688
3300025896|Ga0208916_10512217	Not Available	522
3300027079|Ga0255188_1022128	Not Available	1337
3300027153|Ga0255083_1092262	Not Available	562
3300027157|Ga0255204_1045403	Not Available	816
3300027211|Ga0208307_1002372	Not Available	3312
3300027263|Ga0208446_1006968	Not Available	1935
3300027499|Ga0208788_1116095	Not Available	619
3300027608|Ga0208974_1167138	Not Available	549
3300027659|Ga0208975_1057739	Not Available	1179
3300027806|Ga0209985_10004192	Not Available	11747
3300028265|Ga0255197_1012295	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1307
3300028265|Ga0255197_1042742	Not Available	627
3300031857|Ga0315909_10073621	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3044
3300031857|Ga0315909_10095449	All Organisms → cellular organisms → Bacteria → Proteobacteria	2580
3300031857|Ga0315909_10365055	Not Available	1049
3300031857|Ga0315909_10789006	Not Available	602
3300031951|Ga0315904_10096678	Not Available	3115
3300032050|Ga0315906_10695985	Not Available	817
3300032050|Ga0315906_11114358	Not Available	581
3300033816|Ga0334980_0362351	Not Available	554
3300033993|Ga0334994_0026843	Not Available	3768
3300033993|Ga0334994_0035159	Not Available	3218
3300033993|Ga0334994_0175256	Not Available	1182
3300033996|Ga0334979_0237859	Not Available	1058
3300034012|Ga0334986_0318440	Not Available	818
3300034019|Ga0334998_0234773	Not Available	1120
3300034061|Ga0334987_0011149	Not Available	8350
3300034061|Ga0334987_0053988	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3314
3300034061|Ga0334987_0068721	Not Available	2843
3300034061|Ga0334987_0545754	Not Available	696
3300034062|Ga0334995_0080202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. SID14000	2538
3300034062|Ga0334995_0084617	Not Available	2453
3300034062|Ga0334995_0386962	Not Available	880
3300034062|Ga0334995_0510825	Not Available	720
3300034092|Ga0335010_0008630	Not Available	8427
3300034101|Ga0335027_0063684	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2925
3300034109|Ga0335051_0024075	All Organisms → Viruses → Predicted Viral	3327
3300034111|Ga0335063_0491366	Not Available	599
3300034112|Ga0335066_0167214	Not Available	1330

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.10%
Terrestrial	Environmental → Terrestrial	1.90%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	80.95%
Marine	Environmental → Aquatic → Marine	17.14%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.90%

Type

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	32.38%
Lentic	Environmental → Aquatic → Freshwater → Lentic	29.52%
River	Environmental → Aquatic → Freshwater → River	9.52%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	8.57%
Coastal	Environmental → Aquatic → Marine → Coastal	7.62%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	6.67%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.95%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.95%
Creek	Environmental → Aquatic → Freshwater → Creek	0.95%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.95%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	32.38%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	26.67%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	9.52%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	8.57%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	7.62%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	6.67%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.86%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.95%

Habitat

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	20.95%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	20.00%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	9.52%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	8.57%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	6.67%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.76%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	3.81%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	3.81%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	3.81%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.86%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.86%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.90%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.90%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.90%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.95%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.95%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.95%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.95%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.95%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental
3300006030	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA	Environmental
3300006639	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11	Environmental
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental
3300007212	Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Bottom layer) 7 sequencing projects	Environmental
3300007214	Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Surface layer) 9 sequencing projects	Environmental
3300007216	Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Surface and Bottom layer) 16 sequencing projects	Environmental
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental
3300007600	Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3	Environmental
3300007606	Estuarine microbial communities from the Columbia River estuary - metaG 1569-02	Environmental
3300007618	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-02	Environmental
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental
3300008111	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NA	Environmental
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental
3300017707	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.N	Environmental
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental
3300020535	Freshwater microbial communities from Lake Mendota, WI - 25JUL2011 deep hole epilimnion (SPAdes)	Environmental
3300020549	Freshwater microbial communities from Lake Mendota, WI - 12OCT2012 deep hole epilimnion (SPAdes)	Environmental
3300021438	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17 MG	Environmental
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental
3300024276	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepA_8d	Environmental
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental
3300024348	0.2um to 3um size fraction coassembly	Environmental
3300024487	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepB_0h (Metagenome Metatranscriptome)	Environmental
3300024492	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepC_8h	Environmental
3300024511	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Law_RepA_8h	Environmental
3300024512	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepC_0h	Environmental
3300025585	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA (SPAdes)	Environmental
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental
3300027079	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepB_8h	Environmental
3300027153	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepC_8h	Environmental
3300027157	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepC_8h	Environmental
3300027211	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02 (SPAdes)	Environmental
3300027263	Estuarine microbial communities from the Columbia River estuary - metaG 1569A-3 (SPAdes)	Environmental
3300027499	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11 (SPAdes)	Environmental
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental
3300027806	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG (SPAdes)	Environmental
3300028265	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Law_RepB_8h	Environmental
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental
3300034109	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME26Aug2009-rr0158	Environmental
3300034111	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Oct2011-rr0186	Environmental
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29032_1093990712	3300002408	Freshwater	MVKKIGLFWYLVNAPGGAFHGIPWPTKADADEILRAVLAQHERAAPCAS*
B570J29032_1095646182	3300002408	Freshwater	MVKQIGLFWYLVNAPGGAFHGIPWPTKADADEILRAVLAQHERAAPCAS*
B570J40625_1008805272	3300002835	Freshwater	MVKKIGLFWYLVNAPGGAFHGIPWPTKADAEEILRAVLAQHERAAPCEC*
Ga0007787_100055555	3300004240	Freshwater Lake	MVKQIGLFWYIVGAPGGAFYGFPWPTCADAEEILRAVLAQQERAGPC*
Ga0069718_154930405	3300004481	Sediment	MTPPTVKQIGLFWFITNAPGGAFYGFPWPTRADAEEVLRCVLAQAERAAP*
Ga0068877_1000459320	3300005525	Freshwater Lake	MIKKIGLFWFIVGAPGGAFYGVPWPTKADAEEILRAVLTQTEKGD*
Ga0049081_100571694	3300005581	Freshwater Lentic	MSAPHVKPQGLFFYIVNAPGGAFYGFPWPTRADAEEVLRCVLAQAERAAP*
Ga0049080_100312863	3300005582	Freshwater Lentic	MSAPHVKPQGLFFYIVNAPGGAFYGFPWPTRADAEEVLRCVLAQAERTAP*
Ga0079957_101093111	3300005805	Lake	MTAPHVKPQGLFFYIVNAPGGAFYGFPWPTRADAEEVLRCVLAQAERTAP*
Ga0079957_10538094	3300005805	Lake	MVKQIGLFWYLVNAPGGAFHGFPWPTKADAEEILRCVMECHAKAAPPPC*
Ga0079957_10709287	3300005805	Lake	MVKQIGLFWYLVNAPGGAFHGFPWPTKADAEEILRCVMECHAKAAPPPCSP*
Ga0079957_10761653	3300005805	Lake	MVKQIGLFWYLVNAPGNAFHGFPWPTKADAEEILRCVMECHAKAAPPPC*
Ga0075470_101475133	3300006030	Aqueous	MVKKIGLFWYLVNAPGGAFHGIPWPTRADAQEILRCVMECHAKAAPPPC*
Ga0079301_10609964	3300006639	Deep Subsurface	MVKKIGLFWYLVNAPSGAFHGIPWPTRADAEEILRAVLAQHDKAAPC*
Ga0075471_102595424	3300006641	Aqueous	MVKKIGLFWYLVNAPGGAFHGFPWPTKADADEILRAVMAQHDKAAPC*
Ga0070749_100549304	3300006802	Aqueous	MVKQIGLFWYLVNAPGGAFHGIPWPTRADAEEILRTVLAQHERAAPC*
Ga0103958_11641282	3300007212	Freshwater Lake	MSAPHVKPQGLFWYIVNAPGGAFWGFPWPTRADAEEMLRCVVEHHAKTAPPPC*
Ga0103959_12616554	3300007214	Freshwater Lake	MSAPHVKPQGLFWYIVNAPGGAFHGFPWPTRADAEEILRCVMEIHITERAES*
Ga0103961_13171133	3300007216	Freshwater Lake	FWYIVNAPGGAFWGFPWPTRADAEEMLRCVVEHHAKTAPPPC*
Ga0102861_10028436	3300007544	Estuarine	MSAPHVKPQGLFWYIVGAPGGAFYGIPWPTRADAEEVLRCVLAQHERATPCAS*
Ga0102861_10073573	3300007544	Estuarine	MTKKIGLFWYIVGAPGGAFHGIPWPTKADADEILRAVLAQQDKAALPCLP*
Ga0102920_10916435	3300007600	Estuarine	MVKQIGLFWYLVNAPGGAFHGIPWPTRADAEEILRAVLAQHER
Ga0102923_11332242	3300007606	Estuarine	FWYIVGAPAGAFHGIPWPTRADAEEILRAVLAQAERAAPCEC*
Ga0102896_10935771	3300007618	Estuarine	QGLFWYIVGAPGGAFYGIPWPTRADAEEVLRCVLAQHERATPCAS*
Ga0105745_11426663	3300007972	Estuary Water	MTKKIGLFWYIVGAPGGAFHGIPWPTKSDADEILRAVLAQQDKAALPCLP*
Ga0105748_104225212	3300007992	Estuary Water	MTKKIGLFWYIVGAPGGAFHGIPWPTKADADEILSAVLAQQDKAALPCLP*
Ga0114344_100014924	3300008111	Freshwater, Plankton	MVKQIGLFWYIVGAPGGAFYGTPWPTKADADEILRAVLAQHERAALCAS*
Ga0114363_10096627	3300008266	Freshwater, Plankton	MVKKIGLFWYLVNAPGGAFHGIPWPTKADADEILRCVMESHTTERAE*
Ga0114363_10789692	3300008266	Freshwater, Plankton	MVRKIGLFWYLVNAPGGAFHGIPWPTQADADEILRAVLAQHERATPCEC*
Ga0114363_11150441	3300008266	Freshwater, Plankton	MIKRIGLFWFIVGAPGGAFYGVPWPTKADAEEILRA
Ga0129336_104593524	3300010370	Freshwater To Marine Saline Gradient	FWFIVGAPGGAFYGVPWPTKADAEEILRAVLTQTEKGD*
Ga0151620_12700912	3300011268	Freshwater	MVKQIGLFWYLVNAPGNAFHGFPWPTKADAEEILRCVMECHAKAAPPPCLP*
Ga0164293_102668373	3300013004	Freshwater	VIKKIGLFWYLVNAPGGAFHGVPWPTRADAEEILRAVLAQQDKAAPCAS*
Ga0181363_10028406	3300017707	Freshwater Lake	MTKKIGLFWYLVNAPSGAFHGIPWPTKADADEILRAVLAQHDKAAPC
Ga0181363_10514311	3300017707	Freshwater Lake	MVKQIGLFWYLVNAPSGAFHGIPWPTKADADEILRAVLAQQDKAALPCLP
Ga0181352_10112693	3300017747	Freshwater Lake	MVKKIGLFWYLVNAPGGAFHGIPWPTCADAEEILRAVLAQQDKAALPCLP
Ga0181352_10136291	3300017747	Freshwater Lake	MVKKIGLFWYLVNAPGGAFHGTPWPTKADAEEILRAVLAQHERAG
Ga0181352_11820212	3300017747	Freshwater Lake	MTKKIGLFWYIVGAPGGAFYGIPWPSRADAEEILRAVLAQRDKAAPC
Ga0181352_11850061	3300017747	Freshwater Lake	MVKQIGLCWYLVNAPSGAFHGFPWPTKADADEILRAVLAQQDKAAPC
Ga0181344_10378113	3300017754	Freshwater Lake	MVKQIGLFWYLVNAPGGAFHGIPWPTQADAEEILRAVLAQHERAAPCEC
Ga0181344_10710412	3300017754	Freshwater Lake	MVKQIGLFWYIVGAPGGAFHGIPGPPKADADEILRAVLAQQDKAALPCLP
Ga0181344_11107131	3300017754	Freshwater Lake	MVKQIGLFWYLVNAPAGAFHGFPWPTKADADEILRAVLAQHERAGPCAS
Ga0181344_11729502	3300017754	Freshwater Lake	MTKKIGLFWYLVNAPGGAFHGIPWPTKADADEILRAVLAQHERAALPC
Ga0181355_11582182	3300017785	Freshwater Lake	MVKKIGLFWYIVGAPGGAFYGIPWPTQADADEILRAVLAQQDKAALPCLP
Ga0211734_111532029	3300020159	Freshwater	MVKKIGLFWYLVNAPGGAFHGIPWPTKADADEILRAVLAQQDKAALPCLP
Ga0211733_1077509611	3300020160	Freshwater	MSAPHVKPQGLFWYIVGAPGGAFWGFPWPTRADAEEVLRCVLAQAERAAPCEY
Ga0208228_10591142	3300020535	Freshwater	MVKKIGLFWYLVNAPGGAFHGIPWPTKADADEILRAVLAQHERAAPCAS
Ga0207942_10055966	3300020549	Freshwater	MVKQIGLFWYLVNAPGGAFHGIPWPTKADADEILRAVLAQHERAAPCEC
Ga0213920_10146756	3300021438	Freshwater	MVKQIGLFWYLVNAPGGAFHGIPWPTKADAEEILRAVLAQQDKAASC
Ga0222712_107285222	3300021963	Estuarine Water	MTKKIGLFWYIVGAPAGAFHGFPWPTKADADEILRAVLAQQDKAAPC
Ga0181353_10008276	3300022179	Freshwater Lake	MVKQIGLFWYIVGAPGGAFYGFPWPTCADAEEILRAVLAQQERAGPC
Ga0181353_100099310	3300022179	Freshwater Lake	MVKKIGLFWYLVNAPGGAFHGFPWPTRADAEEILRAVLAQHERAALPC
Ga0181353_10040192	3300022179	Freshwater Lake	MVKKIGLFWYIVGAPGGAFYGIPWPTKADADEILRAVLAQQDKAALPCLP
Ga0181353_10241764	3300022179	Freshwater Lake	MVKQIGLFWYLVNAPGGAFHGIPWPTRADADEILRAVMAQQDKAAPC
Ga0181353_10312523	3300022179	Freshwater Lake	MTKKIGLFWYLVNAPGGAFHGIPWPTKADADEILRAVLAQHDKAAPC
Ga0181353_10788433	3300022179	Freshwater Lake	MVKQIGLFWYLVNAPAGAFHGFPWPTKADADEILRAVMAQHERAALPCLP
Ga0181353_11066862	3300022179	Freshwater Lake	MVKQIGLFWYLVNAPSGAFHGIPWPTKADADEILRAVLAQHERAALPC
Ga0181353_11246142	3300022179	Freshwater Lake	MTKKIGLFWYIVGAPGGAFHGIPWPTKADADEILRAVLAQQDKAALPCLP
Ga0255205_10159732	3300024276	Freshwater	MVKQIGLFWYLVNAPGGAFHGIPWPTKADADEILRAVLAQHERTAPCEC
Ga0244777_108690443	3300024343	Estuarine	MTKKIGLFWYIVGAPGGAFHGIPWPTKADADEILRAVLAQQDKAAPPPC
Ga0244776_106943231	3300024348	Estuarine	IGLFWYIVGAPAGAFHGIPWPTRADAEEILRAVLAQAERAAPCEC
Ga0255222_10712122	3300024487	Freshwater	MVKKIGLFWYLVNAPGGAFHGFPWPTKADADEILRAVLAQQDKAALPCLP
Ga0255189_10038402	3300024492	Freshwater	MVKKIGLFWYLVNAPGGAFHGIPWPTKADADEILRAVLAQAERATPCLP
Ga0255196_10363451	3300024511	Freshwater	NAPGGAFHGIPWPTKADADEILRAVLAQHERTAPCEC
Ga0255186_10114545	3300024512	Freshwater	YPRPGRSQPMVKKIGLFWYLVNAPGGAFHGIPWPTKADADEILRAVLAQAERATPCLP
Ga0208546_10912003	3300025585	Aqueous	MVKKIGLFWYLVNAPGGAFHGIPWPTRADAQEILRCVMECHAKAAPPPC
Ga0208916_105122172	3300025896	Aqueous	MVKQIGLFWYLVNAPGGAFHGFPWPTKADADEILRAVMAQHDKAAPC
Ga0255188_10221286	3300027079	Freshwater	SVAYPRPGRSQPMVKKIGLFWYLVNAPGGAFHGIPWPTKADADEILRAVLAQAERATPCL
Ga0255083_10922622	3300027153	Freshwater	MVKQIGLFWYLVNAPGGAFHGIPWPTKADADEILRAVLAQHDKAAPC
Ga0255204_10454034	3300027157	Freshwater	PYRAPGGVSVAYPRPGRSQPMVKKIGLFWYLVNAPGGAFHGIPWPTKADADEILRAVLAQAERATPCLP
Ga0208307_10023727	3300027211	Estuarine	MSAPHVKPQGLFWYIVGAPGGAFYGIPWPTRADAEEVLRCVLAQHERATPCAS
Ga0208446_10069687	3300027263	Estuarine	MSAPHVKPQGLFWYIVGAPGGAFYGIPWPTRADAEEVLRCVLAQHERATP
Ga0208788_11160952	3300027499	Deep Subsurface	MVKKIGLFWYLVNAPSGAFHGIPWPTRADAEEILRAVLAQHDKAAPC
Ga0208974_11671383	3300027608	Freshwater Lentic	MSAPHVKPQGLFFYIVNAPGGAFYGFPWPTRADAEEVLRCVLAQAERTAP
Ga0208975_10577392	3300027659	Freshwater Lentic	MSAPHVKPQGLFFYIVNAPGGAFYGFPWPTRADAEEVLRCVLAQAERAAP
Ga0209985_100041923	3300027806	Freshwater Lake	MIKKIGLFWFIVGAPGGAFYGVPWPTKADAEEILRAVLTQTEKGD
Ga0255197_10122955	3300028265	Freshwater	MVKQIGLFWYLVNAPGGAFHGIPWPTKADADEILR
Ga0255197_10427421	3300028265	Freshwater	FWYLVNAPGGAFHGIPWPTKADADEILRAVLAQAERATPCLP
Ga0315909_100736212	3300031857	Freshwater	MVKKIGLFWYLVNAPGGAFHGIPWPTKADADEILRCVMESHTTERAE
Ga0315909_100954493	3300031857	Freshwater	MVKKIGLFWYLVNAPGGAFHGIPWPTKADAEEILRAVLAQQDKAAPC
Ga0315909_103650552	3300031857	Freshwater	MVRKIGLFWYLVNAPGGAFHGIPWPTQADADEILRAVLAQHERATPCEC
Ga0315909_107890063	3300031857	Freshwater	MVKKIGLFWYLVNAPGGAFHGIPWPTRADADEILR
Ga0315904_100966785	3300031951	Freshwater	MIKRIGLFWFIVGAPGGAFYGVPWPTKADAEEILRAVLTQTEKENEK
Ga0315906_106959854	3300032050	Freshwater	MVRKIGLFWYLVNAPGGAFHGIPWPTQADADEILRAVLAQH
Ga0315906_111143581	3300032050	Freshwater	MVKKIGLFWYLVNAPGGAFHGIPWPTRADADEILRAVLAQHE
Ga0334980_0362351_162_305	3300033816	Freshwater	MVKKIGLFWYLVNAPGGAFHGIPWPTKADADEILRAVLAQQDKTAPC
Ga0334994_0026843_316_465	3300033993	Freshwater	MTKKIGLFWYLVNAPGGAFHGIPWPTKADADEILRAVMAQHERAGPCAS
Ga0334994_0035159_561_710	3300033993	Freshwater	MVKKIGLFWYLVNAPGGAFHGIPWPTRADAEEILRAVLAQHERATPCAS
Ga0334994_0175256_6_155	3300033993	Freshwater	MVKKIGLFWYLVNAPGGAFHGIPWPTKADAEEILRAVLAQHERAAPCEC
Ga0334979_0237859_346_495	3300033996	Freshwater	VIKKIGLFWYLVNAPGGAFHGVPWPTRADAEEILRAVLAQQDKAAPCAS
Ga0334986_0318440_372_515	3300034012	Freshwater	MVKKIGLFWYLVNAPGGAFHGIPWPTKADADEILRAVLAQQDKAAPC
Ga0334998_0234773_656_805	3300034019	Freshwater	MVKKIGLFWYLVNAPGGAFHGIPWPTKADADEILRAVLAQQDKAAPCAS
Ga0334987_0011149_4910_5059	3300034061	Freshwater	MVKKIGLFWYLVNAPSGAFHGIPWPTKADADEILRAVLAQHERAAPCAS
Ga0334987_0053988_1935_2078	3300034061	Freshwater	MVKQIGLFWYLVNAPGGAFHGIPWPTKADADEILRCVMESHTTERAE
Ga0334987_0068721_1846_1998	3300034061	Freshwater	MVKKIGLFWYLVNAPGGAFHGIPWPTKADAEEILRAVLAQQDKAALPCLP
Ga0334987_0545754_417_560	3300034061	Freshwater	MVKQIGLFWYLVNAPGGAFHGIPWPTKADADEILRAVLAQQDKAAPC
Ga0334995_0080202_2224_2373	3300034062	Freshwater	MVKKIGLFWYLVNAPGGAFHGIPWPTRADAEEILRAVLAQHERAAPCAS
Ga0334995_0084617_2323_2451	3300034062	Freshwater	MVKKIGLFWYLVNAPGGAFHGIPWPTRADAEEILRAVLAQHER
Ga0334995_0386962_3_146	3300034062	Freshwater	KKIGLFWYLVNAPGGAFHGIPWPTRADAEEILRAVLAQHERAAPCEC
Ga0334995_0510825_2_145	3300034062	Freshwater	MVKKIGLFWYLVNAPGGAFHGIPWPTRADAEEILRAVLAQHERATPCA
Ga0335010_0008630_5768_5917	3300034092	Freshwater	MVKKIGLFWYLVNAPGGAFHGIPWPTRADAEEILRAVLAQHERAAPCEC
Ga0335027_0063684_2448_2600	3300034101	Freshwater	MVKQIGLFWYLVNAPGGAFHGIPWPTKADADEILRAVLAQQDKAALPCLP
Ga0335051_0024075_3007_3156	3300034109	Freshwater	MTKKIGLFWYIVNAPGGAFHGIPWPTKADADEILRAVLAQHERAAPCAS
Ga0335063_0491366_376_513	3300034111	Freshwater	MVKKIGLFWYLVNAPGGAFHGIPWPTRADAEEILRAVLAQTEKEF
Ga0335066_0167214_1186_1302	3300034112	Freshwater	MNAPGGAFHGIPWPTKADADEILRAVLAQHDKAAPCSP