Metagenome / Metatranscriptome Family F095324

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095324
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	52 residues
Representative Sequence	MINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLNNRVKK
Number of Associated Samples	64
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	6.67 %
% of genes near scaffold ends (potentially truncated)	38.10 %
% of genes from short scaffolds (< 2000 bps)	91.43 %
Associated GOLD sequencing projects	50
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (66.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (76.191 % of family members)
Environment Ontology (ENVO)	Unclassified (93.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (98.095 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80. 1JGI25129J35166_10890582 2JGI25131J35506_10353913 3JGI25131J35506_10573532 4JGI25133J35611_101254783 5JGI25134J35505_100397834 6JGI25134J35505_100583532 7JGI25130J35507_10849221 8JGI25136J39404_10166862 9Ga0066858_101765432 10Ga0066848_101522422 11Ga0066829_100559343 12Ga0066859_100803493 13Ga0066859_102230601 14Ga0066847_100558693 15Ga0066847_100722353 16Ga0066846_101686002 17Ga0066864_100878484 18Ga0066843_100771204 19Ga0066838_102028882 20Ga0066834_101434032 21Ga0098033_11206682 22Ga0098058_11018284 23Ga0098060_11110351 24Ga0098045_10734042 25Ga0098053_10499464 26Ga0098051_10653344 27Ga0110931_11818051 28Ga0098061_10878831 29Ga0098047_102700481 30Ga0098047_102930793 31Ga0098047_103786821 32Ga0136651_106607381 33Ga0138349_10726643 34Ga0164320_106150052 35Ga0181367_10234571 36Ga0181367_10785242 37Ga0181371_10518243 38Ga0181371_10753781 39Ga0181372_10505671 40Ga0181372_10739813 41Ga0181370_10543121 42Ga0181375_10683103 43Ga0181375_10687572 44Ga0181432_12749971 45Ga0211566_11191122 46Ga0211530_10305502 47Ga0211657_10578443 48Ga0211570_11402673 49Ga0211660_1001076112 50Ga0211656_102667482 51Ga0211646_101086951 52Ga0211639_100403835 53Ga0187833_103790651 54Ga0187833_106043351 55Ga0187827_102196174 56Ga0187827_106980421 57Ga0208012_10408332 58Ga0208920_10476065 59Ga0208668_10018739 60Ga0208668_10042849 61Ga0208668_10093825 62Ga0208668_10176237 63Ga0208668_10362972 64Ga0208668_10373041 65Ga0208668_10679783 66Ga0208156_10117346 67Ga0208156_10246744 68Ga0208156_10447721 69Ga0208156_10459891 70Ga0208156_10860722 71Ga0208156_10987961 72Ga0208791_10736303 73Ga0208010_10719901 74Ga0208553_10048996 75Ga0208553_10110502 76Ga0208553_10238271 77Ga0208553_10444572 78Ga0208553_11103452 79Ga0208553_11356063 80Ga0209349_10485472 81Ga0209349_11282972 82Ga0209349_11435974 83Ga0208433_10775631 84Ga0209434_10593406 85Ga0209434_10718071 86Ga0209434_11183462 87Ga0209434_11331911 88Ga0209434_11878241 89Ga0209128_10524771 90Ga0209756_13462733 91Ga0208467_10402292 92Ga0207894_10092752 93Ga0207894_10208211 94Ga0207894_10421421 95Ga0207894_10432503 96Ga0207894_10765641 97Ga0207894_10808712 98Ga0207894_10916752 99Ga0207894_10923663 100Ga0209757_100103741 101Ga0208274_11493282 102Ga0207984_10359763 103Ga0208642_11284071 104Ga0208409_11228061 105Ga0208278_10338612
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80. 1JGI25129J35166_10890582 2JGI25131J35506_10573532 3JGI25134J35505_100583532 4Ga0066858_101765432 5Ga0098033_11206682 6Ga0098053_10499464 7Ga0181372_10739813 8Ga0211660_1001076112 9Ga0208668_10093825 10Ga0208156_10459891 11Ga0207894_10765641
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80. 1JGI25129J35166_10890582 2JGI25131J35506_10573532 3JGI25134J35505_100583532 4Ga0066858_101765432 5Ga0098033_11206682 6Ga0098053_10499464 7Ga0181372_10739813 8Ga0211660_1001076112 9Ga0208668_10093825 10Ga0208156_10459891 11Ga0207894_10765641
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 75.93% β-sheet: 0.00% Coil/Unstructured: 24.07%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF06067	DUF932	0.95

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	33.33 %
Unclassified	root	N/A	66.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	8.57 %
Unclassified	root	N/A	66.67 %
Viruses	superkingdom	All Organisms → Viruses	24.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.57 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.95 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	23.81 %
Unclassified	root	N/A	66.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.57 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.95 %
Unclassified	root	N/A	66.67 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	23.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.57 %
Unclassified	root	N/A	66.67 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	23.81 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.57 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.95 %
Unclassified	root	N/A	66.67 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	23.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.57 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.95 %
Unclassified	root	N/A	66.67 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	23.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.57 %
Unclassified	root	N/A	66.67 %
uncultured Mediterranean phage uvDeep-CGR2-AD10-C281	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD10-C281	0.95 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	23.81 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002484\|JGI25129J35166_1089058	Not Available	550	Open in IMG/M
3300002511\|JGI25131J35506_1035391	Not Available	689	Open in IMG/M
3300002511\|JGI25131J35506_1057353	Not Available	541	Open in IMG/M
3300002514\|JGI25133J35611_10125478	All Organisms → Viruses → environmental samples → uncultured virus	727	Open in IMG/M
3300002518\|JGI25134J35505_10039783	Not Available	1245	Open in IMG/M
3300002518\|JGI25134J35505_10058353	Not Available	943	Open in IMG/M
3300002519\|JGI25130J35507_1084922	Not Available	585	Open in IMG/M
3300002760\|JGI25136J39404_1016686	Not Available	1323	Open in IMG/M
3300005398\|Ga0066858_10176543	Not Available	616	Open in IMG/M
3300005408\|Ga0066848_10152242	Not Available	624	Open in IMG/M

Showing 1 to 10 of 105 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.90%
Oceanic	Environmental → Aquatic → Marine → Oceanic	89.52%
Strait	Environmental → Aquatic → Marine → Strait	0.95%
Unclassified	Environmental → Aquatic → Marine → Unclassified	7.62%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	1.90%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	89.52%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	7.62%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	9.52%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	76.19%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	7.62%
Marine Hydrothermal Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Hydrothermal Vent	0.95%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.95%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	3.81%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.95%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002484	Marine viral communities from the Pacific Ocean - ETNP_2_130	Environmental	Open in IMG/M
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental	Open in IMG/M
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300002518	Marine viral communities from the Pacific Ocean - ETNP_6_100	Environmental	Open in IMG/M
3300002519	Marine viral communities from the Pacific Ocean - ETNP_2_300	Environmental	Open in IMG/M
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental	Open in IMG/M
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental	Open in IMG/M
3300005408	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72	Environmental	Open in IMG/M
3300005422	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43	Environmental	Open in IMG/M
3300005425	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199	Environmental	Open in IMG/M

Showing 1 to 10 of 64 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25129J35166_10890582	3300002484	Marine	MNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLNNRVKK*
JGI25131J35506_10353913	3300002511	Marine	LINKTLAQMNAERAAKRAGHNLKLKAAAMPPKSSLKLQASSAIKKTQLTDRVKK*
JGI25131J35506_10573532	3300002511	Marine	MINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSHKLQASSAIKKTQL
JGI25133J35611_101254783	3300002514	Marine	MINKTLAQMNAERAAKRAGHNLKLKAAAMPPKSSHKLQASSAIKKTQLTDRVKK*
JGI25134J35505_100397834	3300002518	Marine	MINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLNNRVKK*
JGI25134J35505_100583532	3300002518	Marine	LINKSLSQMNAERAGRRAGHNLKLKNRSRSATASCKPQAASALNKTQLTDRVKK*
JGI25130J35507_10849221	3300002519	Marine	MINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLN
JGI25136J39404_10166862	3300002760	Marine	MINKTLAQMNAERAXXRAGHNLKLKAAAMPPESSRKLQASSAIKKTQXXDRVKK*
Ga0066858_101765432	3300005398	Marine	LINKTLAQMNAERAARRAGHNLKLKPSSPHPQSFKLQASSAIKKTQLTDRVKK*
Ga0066848_101522422	3300005408	Marine	LINKTLAQMNAERAAKRAGHNLKLKSSSPHPQSFKLQASSAIKKTQLTDRVKK*
Ga0066829_100559343	3300005422	Marine	MNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLTDRVKK*
Ga0066859_100803493	3300005425	Marine	MINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLTDRVKK*
Ga0066859_102230601	3300005425	Marine	WCYLINKSLSQMNAERADRRAGHNLKLKAAARPLAASCKPQAASALNKTQLTDRVKK*
Ga0066847_100558693	3300005426	Marine	LINKSLSQMNAERAGRRAGHNLKLKAAARPLAASCKPQAASALNKTQLTDRVKK*
Ga0066847_100722353	3300005426	Marine	LINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLTDRVKK*
Ga0066846_101686002	3300005429	Marine	MNAERAAKRAGHNLKLKSSSPHPQSFKLQASSAIKKTQLNNRIKK*
Ga0066864_100878484	3300005520	Marine	MINKSLSQMNAERADRRAGHNLKLKNRSRSAAASCKPQAASAIKKTQLTDRVKK*
Ga0066843_100771204	3300005551	Marine	MINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSHKLQASSALKRTQLNNRVKKEREKKI
Ga0066838_102028882	3300005592	Marine	LINKSLSQMNAERAGRRAGHNLKLKSSSPPPPSRELQAASAIKKTQLNNRIKK*
Ga0066834_101434032	3300005596	Marine	MNAERADRRAGHNLKLKSSSPPPPSRELQAASAIKKTQLNNRIKK*
Ga0098033_11206682	3300006736	Marine	MINKSLAQMNAERADRRAGHNLKLKSSSPPPPSHKLQAASAMKKTQLNNRVKKEREKKI*
Ga0098058_11018284	3300006750	Marine	MKNKTLAQMNAERAGRRAGHNLKLKNRSRSATASCKPQAASALNKTHSNDKVKK*
Ga0098060_11110351	3300006921	Marine	MINKSLSQMNGERADRRAGHNLKLKSSSPHPQATSHKRQASSALKRTQLNNRVKKEREKKI*
Ga0098045_10734042	3300006922	Marine	MKNKTLAQMNAERADRRAGHNLKLKNRSRSASASCKPQAASALNKTHSNYKVKK*
Ga0098053_10499464	3300006923	Marine	AATFLNNTWCYLINKTLAQMNAERAAGPAGHNLKLKSSSPHPQATSHKRQASSALKRTQLTDRVKK*
Ga0098051_10653344	3300006924	Marine	LINKTLAQMNAERAAKRAGHNLKLKSSSPHPQATSHKRQASSALKRTQLNNKVKK*
Ga0110931_11818051	3300007963	Marine	MINKSLSQMNAERADRRAGHNLKSKSSSPHPQSFKLQASSAIKKTQLTDRVKK*
Ga0098061_10878831	3300010151	Marine	MINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASS
Ga0098047_102700481	3300010155	Marine	QNNIWCYLINKTLAQMNAERAAKRAGHNLKLKSSPHPQSFKLQATSATKKTQLNNRVKK*
Ga0098047_102930793	3300010155	Marine	MKNKTLAQMNAERAGRRAGHNLKLKNRSRSASASCKPQAASALNQTHSNDKVKK*
Ga0098047_103786821	3300010155	Marine	NIWCYLINKTLAQMNAERAAKRAGHNLKLKSSSPHPQSFKLQATSATKKTQLNNRVKK*
Ga0136651_106607381	3300010330	Marine Hydrothermal Vent	MKVKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKK
Ga0138349_10726643	3300011312	Deep Ocean	LINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSPL
Ga0164320_106150052	3300013098	Marine Sediment	MNAERAGRRAGHNLKLKSSSPPPPSRELQAESAIKKTQLNNRIKK*
Ga0181367_10234571	3300017703	Marine	TLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLTDRVKK
Ga0181367_10785242	3300017703	Marine	MKVKTLAQMNAERAAKRAGHNLKLKSSPHPQSFKPQASSAIKKTQLTDRVKK
Ga0181371_10518243	3300017704	Marine	MNAERAAKRAGHNLKLKAAAMPPESSRKLQALSATKKTCFSD
Ga0181371_10753781	3300017704	Marine	WCYLINKSLSQMNAERAGRRAGHNLKLKNRSRSASASCKPQAASALNKTQLTDRVKK
Ga0181372_10505671	3300017705	Marine	KHRTMKNKTLSQMNAERADRRAGHNLKLKNRSRSATASCKPQAASALNKTQLTDRVKK
Ga0181372_10739813	3300017705	Marine	TSQKNIWCYLINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLTDRVKK
Ga0181370_10543121	3300017715	Marine	NIWCYLINKTLAQMNAERAAKRAGHNLKLKSSPHPQSFKLQATSATKKTQLNNRVKK
Ga0181375_10683103	3300017718	Marine	MINKTLAQMNAERAAKRAGHNLKLKSSPHPQSFKPQASSALKRTQLNNRVKK
Ga0181375_10687572	3300017718	Marine	LINKTLAQMNAERADRRAGHNLKLKNRSRSASASCKPQAASALKRTQLTDRVKK
Ga0181432_12749971	3300017775	Seawater	TLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLINRVKK
Ga0211566_11191122	3300020272	Marine	LINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLTDRVKK
Ga0211530_10305502	3300020295	Marine	LINKSLSQMNAERAGRRAGHNLKLKAAARPLAASCKPQAASAIKKTQLTDRVKK
Ga0211657_10578443	3300020298	Marine	LINKTLAQMNAERALQRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLTDRVKK
Ga0211570_11402673	3300020344	Marine	INKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLTDRVKK
Ga0211660_1001076112	3300020373	Marine	MKVKTLAQMNAERAAKRAGHNLKLKSPPPTLPPPSLKLQASSAIKKPQLNNRVKI
Ga0211656_102667482	3300020375	Marine	LINKSLSQMNAERAGRRAGHNLKLKNRSRSATASCKPQAASALNKTQLTDRVKK
Ga0211646_101086951	3300020383	Marine	LINKSLSQMNAERAGRRAGHNLKLKNRSRSASASCKPQAASALNKTHSNDKVK
Ga0211639_100403835	3300020435	Marine	MINKSLSQMNAERADRRAGHNLKLKSSSPPPPSRELQAASAMKKTQLNNRVKKEREKKI
Ga0187833_103790651	3300022225	Seawater	MINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLTDRVKK
Ga0187833_106043351	3300022225	Seawater	LINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSA
Ga0187827_102196174	3300022227	Seawater	LINKSLSQMNAERAGRRAGHNLKLKNRSRSASASCKPQAASALNKTQLTDRVKK
Ga0187827_106980421	3300022227	Seawater	MINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSHKLQASSAIKKTQLNNRIKK
Ga0208012_10408332	3300025066	Marine	MINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSHKLQASSALKRTQLNNRIKK
Ga0208920_10476065	3300025072	Marine	QMNAERAAKRAGHNLKLKAAAMPPESSHKLQASSALKRTQLNNRVKKEREKKI
Ga0208668_10018739	3300025078	Marine	MNAERAGRRAEHNLKLKSSSPPPPSRELQAASAMKKTQLNNRVKKEREKKI
Ga0208668_10042849	3300025078	Marine	MINKTLAQMNAERADRRAGHNLKLKSSSPHPQATSHKRQASSAIKKTQLNNRIKK
Ga0208668_10093825	3300025078	Marine	MINKTLAQMNAERAIRRTQPGFCLTYGHNLKLKSSPHPQATSHKRQASSAIKKTQLNNKIKK
Ga0208668_10176237	3300025078	Marine	MINKSLSQMNGERADRRAGHNLKLKSSSPHPQATSHKRQASSALKRTQLTDKVKK
Ga0208668_10362972	3300025078	Marine	LINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLNNRVKK
Ga0208668_10373041	3300025078	Marine	MINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSHKLQASSA
Ga0208668_10679783	3300025078	Marine	MINKSLSQMNAERADRRAGHNLKLKNRSRSASASCKPQAASALNKTQLTDRVKK
Ga0208156_10117346	3300025082	Marine	MNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLTDRVKK
Ga0208156_10246744	3300025082	Marine	MINKTLAQMNAERADRRAGHNLKLKSSSPHPQATSHKRQASSAIKKTQLNNRVKK
Ga0208156_10447721	3300025082	Marine	SQRYASQPMINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLTDRVKK
Ga0208156_10459891	3300025082	Marine	QMNGERADRRAGHNLKLKSSSPHPQATSHKRQASSALKRTQLNNRVKKEREKKI
Ga0208156_10860722	3300025082	Marine	MNAERAAKRAGHNLKLKAAAMPPESSHKLQASSAIKKTQLTNRVKK
Ga0208156_10987961	3300025082	Marine	MINKSLSQMNAERAGRRAGHNLKLKNRSRSASASCKPQAASALNKTQLTDRVKK
Ga0208791_10736303	3300025083	Marine	MINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLTD
Ga0208010_10719901	3300025097	Marine	LINKSLSQMNAERAGRRAGHNLKLKAAAMPLAASCKPQAASAIKKTQLTDRVKK
Ga0208553_10048996	3300025109	Marine	MNAERAAKRAGHNLKLKSSPHPQSFKLQATSATKKTQLNNRVKK
Ga0208553_10110502	3300025109	Marine	MINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLNNRVKK
Ga0208553_10238271	3300025109	Marine	SQRYASQPMINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLNNRVKK
Ga0208553_10444572	3300025109	Marine	MINKSLSQMNGERADRRAGHNLKLKSSSPHPQATSHKRQASSAIKKTQLNNRIKK
Ga0208553_11103452	3300025109	Marine	LINKSLSQMNAERAGRRAGHNLKLKNRSRSASASCKPQAASALNKTHSNDKVKK
Ga0208553_11356063	3300025109	Marine	LINKTLAQMNAERAAKRAGHNLKLKSSSPHPQATSSKLQASSAIKKTQLNNRVKK
Ga0209349_10485472	3300025112	Marine	MINKTLAQMNAERAAKRAGHNLKLKAAAMPPKSSHKLQASSAIKKTQLTDRVKK
Ga0209349_11282972	3300025112	Marine	LINKTLAQMNAERAAKRAGHNLKLKSSSPHPQSFKLQATSAIKKTQLNNRVKK
Ga0209349_11435974	3300025112	Marine	SQRYASQPMINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSALKRTQLNNRIKK
Ga0208433_10775631	3300025114	Marine	MINKTLAQMNAERAAGPAGHNLKLKSSSPHPQATSHKRQASSALKRTQLTDRVKK
Ga0209434_10593406	3300025122	Marine	RAAKRAGHNLKLKAAAMPPESSHKLQASSALKRTQLNNRVKKEREKKI
Ga0209434_10718071	3300025122	Marine	RAAKRAGHNLKLKAAAMPPESSHKLQASSALKRTQLNNRVKK
Ga0209434_11183462	3300025122	Marine	MNAERAAKRAGHNLKLKSSSPHPQSFKLQASSAIKKTQLTDR
Ga0209434_11331911	3300025122	Marine	MNAERADRRAGHNLKLKSSSPPPPSRELQAASAMKKTQLNNRVKKEREKKI
Ga0209434_11878241	3300025122	Marine	INKSLSQMNAERADRRAGHNLKLKSSSPPPPSRELQAASAMKKTQLNNRVKKEREKKI
Ga0209128_10524771	3300025131	Marine	AKRAGHNLKLKAAAMPPESSHKLQASSAIKKTQLNNRIKK
Ga0209756_13462733	3300025141	Marine	NAERAAKRAGHNLKLKAAAMPPESSHKLQASSAIKKTQLNNRVKKEREKKI
Ga0208467_10402292	3300025265	Deep Ocean	LINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSALKRTQLNNRIKK
Ga0207894_10092752	3300025268	Deep Ocean	LINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRKLQASSAIKKTQLTDRVKKEREKKI
Ga0207894_10208211	3300025268	Deep Ocean	MNAERAGRRAGHNLKLKSSSPPPPSRKLQAASAMKKTQLNNRVKKEREKKI
Ga0207894_10421421	3300025268	Deep Ocean	MINKTLAQMNAERAAKRAGHNLKLKSSSPHLPPPSHKLQASSAMKKTQLNNRVKKEREKK
Ga0207894_10432503	3300025268	Deep Ocean	LINKSLSQMNAERADRRAGHNLKLKNRSRSASASCKPQAASALNKTQLTDRVKK
Ga0207894_10765641	3300025268	Deep Ocean	LINKTLAQMNAERAAKRAGHNLKLKSSSPHPQSFK
Ga0207894_10808712	3300025268	Deep Ocean	LINKTLAQMNAERAAKRAGHNLKLKSSSPHPQSFKLQATSAIKKTQL
Ga0207894_10916752	3300025268	Deep Ocean	MINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSHKLQASSATKKTQLNNRINK
Ga0207894_10923663	3300025268	Deep Ocean	INKTLAQMNAERAAKRAGHNLKLKAAAMPPESSHKLQASSALKRTQLNNRVKK
Ga0209757_100103741	3300025873	Marine	MINKTLAQMNAERAAKRAGHNLKLKAAAMPPESSRMLQAS
Ga0208274_11493282	3300026188	Marine	MINKTLAQMNAERAAKRAGHNLKLKSSSPHPQSFKPQASSAIKKTQLTDRVKK
Ga0207984_10359763	3300026202	Marine	MNAERADRRAGHNLKLKSSSPPPPSRELQAASAIKKTQLNNRIKK
Ga0208642_11284071	3300026210	Marine	MINKTLAQMNAERAARRAGHNLKLKAAAMPPESSRKLQA
Ga0208409_11228061	3300026212	Marine	MNAERAGRRAGHNLKLKSSSPPPPSRELQAASAIKKTQLNNRVKKEREKK
Ga0208278_10338612	3300026267	Marine	LINKSLSQMNAERADRRAGHNLKLKSSSPPPPSRELQAASAMKKTQLNNRVKKEREKKI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095324

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences