Metagenome Family F095305

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095305
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	68 residues
Representative Sequence	MTKSFAKLSVLLLVLTLGLLWSTEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKT
Number of Associated Samples	98
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.08 %
% of genes near scaffold ends (potentially truncated)	97.14 %
% of genes from short scaffolds (< 2000 bps)	90.48 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.095 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.524 % of family members)
Environment Ontology (ENVO)	Unclassified (27.619 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.095 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 34.38% β-sheet: 0.00% Coil/Unstructured: 65.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00528	BPD_transp_1	77.14
PF00005	ABC_tran	7.62
PF01977	UbiD	2.86
PF09084	NMT1	0.95
PF02423	OCD_Mu_crystall	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	2.86
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.95
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.95
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	70.48 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	10.48 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	68.57 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.90 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	68.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.71 %
Unclassified	root	N/A	1.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.95 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	68.57 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.90 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.90 %
Unclassified	root	N/A	1.90 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.95 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.95 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	68.57 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.90 %
Unclassified	root	N/A	1.90 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.95 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.95 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	68.57 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.90 %
Unclassified	root	N/A	1.90 %
Compostimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Compostimonas	0.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.95 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.95 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	68.57 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.90 %
Unclassified	root	N/A	1.90 %
Compostimonas suwonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Compostimonas → Compostimonas suwonensis	0.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.95 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0862669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1291	Open in IMG/M
3300000559\|F14TC_100739174	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300000890\|JGI11643J12802_11387016	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	540	Open in IMG/M
3300000891\|JGI10214J12806_10466633	All Organisms → cellular organisms → Bacteria	2558	Open in IMG/M
3300003371\|JGI26145J50221_1016201	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	694	Open in IMG/M
3300003373\|JGI25407J50210_10131769	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300003998\|Ga0055472_10209808	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	603	Open in IMG/M
3300003999\|Ga0055469_10313752	Not Available	509	Open in IMG/M
3300004643\|Ga0062591_101983897	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005213\|Ga0068998_10178325	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005290\|Ga0065712_10403151	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300005293\|Ga0065715_10526564	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300005294\|Ga0065705_10682914	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	661	Open in IMG/M
3300005295\|Ga0065707_10209823	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300005327\|Ga0070658_10063420	All Organisms → cellular organisms → Bacteria	3012	Open in IMG/M
3300005336\|Ga0070680_100512217	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1027	Open in IMG/M
3300005347\|Ga0070668_100865185	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	806	Open in IMG/M
3300005549\|Ga0070704_100948100	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	776	Open in IMG/M
3300005615\|Ga0070702_100140875	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1536	Open in IMG/M
3300005764\|Ga0066903_106950086	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587	Open in IMG/M
3300005981\|Ga0081538_10081149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1726	Open in IMG/M
3300006032\|Ga0066696_10611780	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	707	Open in IMG/M
3300006755\|Ga0079222_10147406	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300006755\|Ga0079222_10875296	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	749	Open in IMG/M
3300006844\|Ga0075428_100782912	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300006846\|Ga0075430_101677563	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300006847\|Ga0075431_101823726	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300006914\|Ga0075436_100265020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1226	Open in IMG/M
3300006969\|Ga0075419_10472184	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	868	Open in IMG/M
3300006969\|Ga0075419_10910334	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	635	Open in IMG/M
3300007004\|Ga0079218_10003104	All Organisms → cellular organisms → Bacteria	6755	Open in IMG/M
3300007076\|Ga0075435_101990900	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300009081\|Ga0105098_10791336	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	511	Open in IMG/M
3300009087\|Ga0105107_10481103	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	865	Open in IMG/M
3300009094\|Ga0111539_10477333	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300009137\|Ga0066709_104615453	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	504	Open in IMG/M
3300009157\|Ga0105092_10266800	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	963	Open in IMG/M
3300009678\|Ga0105252_10501531	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300009792\|Ga0126374_10144172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1433	Open in IMG/M
3300010043\|Ga0126380_10453530	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	970	Open in IMG/M
3300010320\|Ga0134109_10074958	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1151	Open in IMG/M
3300010325\|Ga0134064_10016581	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2044	Open in IMG/M
3300010329\|Ga0134111_10014393	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2583	Open in IMG/M
3300010364\|Ga0134066_10256513	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	608	Open in IMG/M
3300010397\|Ga0134124_12311668	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M
3300012173\|Ga0137327_1056629	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	863	Open in IMG/M
3300012210\|Ga0137378_11119853	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	702	Open in IMG/M
3300012350\|Ga0137372_11192336	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300012494\|Ga0157341_1004847	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	987	Open in IMG/M
3300012499\|Ga0157350_1046644	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300012512\|Ga0157327_1091565	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
3300012514\|Ga0157330_1019766	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	758	Open in IMG/M
3300012519\|Ga0157352_1001597	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1724	Open in IMG/M
3300012931\|Ga0153915_10024876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5946	Open in IMG/M
3300012931\|Ga0153915_11320273	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	843	Open in IMG/M
3300012971\|Ga0126369_10243282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1765	Open in IMG/M
3300014053\|Ga0119956_1021218	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300014157\|Ga0134078_10151195	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	913	Open in IMG/M
3300014263\|Ga0075324_1065828	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	730	Open in IMG/M
3300014867\|Ga0180076_1079727	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	602	Open in IMG/M
3300014879\|Ga0180062_1144427	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	547	Open in IMG/M
3300015371\|Ga0132258_13632605	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1054	Open in IMG/M
3300017966\|Ga0187776_11580092	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
3300018072\|Ga0184635_10001844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6279	Open in IMG/M
3300018076\|Ga0184609_10065702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Compostimonas → Compostimonas suwonensis	1579	Open in IMG/M
3300018078\|Ga0184612_10546554	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300018081\|Ga0184625_10130470	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1309	Open in IMG/M
3300018422\|Ga0190265_11038269	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	941	Open in IMG/M
3300018422\|Ga0190265_11081586	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	923	Open in IMG/M
3300018422\|Ga0190265_11224039	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	869	Open in IMG/M
3300018422\|Ga0190265_12547723	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	610	Open in IMG/M
3300018429\|Ga0190272_12646462	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	550	Open in IMG/M
3300021073\|Ga0210378_10014560	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3240	Open in IMG/M
3300021344\|Ga0193719_10113896	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1176	Open in IMG/M
3300025313\|Ga0209431_10769921	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	703	Open in IMG/M
3300025917\|Ga0207660_10764642	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	788	Open in IMG/M
3300025921\|Ga0207652_10771218	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	855	Open in IMG/M
3300025926\|Ga0207659_11267769	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	633	Open in IMG/M
3300025972\|Ga0207668_11269749	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	663	Open in IMG/M
3300025981\|Ga0207640_10919335	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	765	Open in IMG/M
3300026118\|Ga0207675_101330155	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	739	Open in IMG/M
3300026285\|Ga0209438_1060259	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300026308\|Ga0209265_1241975	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300026332\|Ga0209803_1093801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1237	Open in IMG/M
3300027163\|Ga0209878_1033685	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	665	Open in IMG/M
3300027513\|Ga0208685_1032989	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300027561\|Ga0209887_1093715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300027722\|Ga0209819_10025364	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1985	Open in IMG/M
3300027722\|Ga0209819_10068511	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1227	Open in IMG/M
3300027787\|Ga0209074_10298938	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	643	Open in IMG/M
3300027840\|Ga0209683_10176178	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	980	Open in IMG/M
3300027907\|Ga0207428_10621958	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	777	Open in IMG/M
3300027961\|Ga0209853_1076099	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	884	Open in IMG/M
3300031170\|Ga0307498_10010475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1848	Open in IMG/M
3300031720\|Ga0307469_11442003	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	658	Open in IMG/M
3300031944\|Ga0310884_10407305	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300031965\|Ga0326597_10261092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1992	Open in IMG/M
3300032002\|Ga0307416_100661662	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1130	Open in IMG/M
3300032005\|Ga0307411_11076759	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	723	Open in IMG/M
3300032126\|Ga0307415_101933234	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	573	Open in IMG/M
3300033412\|Ga0310810_10840832	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	820	Open in IMG/M
3300033417\|Ga0214471_10111330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2254	Open in IMG/M
3300033813\|Ga0364928_0073647	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	778	Open in IMG/M
3300034150\|Ga0364933_184675	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	546	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.24%
Host-Associated	Host-Associated	24.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.29%
Plants	Host-Associated → Plants	24.76%
Aquatic	Environmental → Aquatic	20.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.24%
Freshwater	Environmental → Aquatic → Freshwater	9.52%
Sediment	Environmental → Aquatic → Sediment	8.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.62%
Marine	Environmental → Aquatic → Marine	2.86%
Floodplain	Environmental → Terrestrial → Floodplain	1.90%
Roots	Host-Associated → Plants → Roots	1.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.57%
Loam	Environmental → Terrestrial → Soil → Loam	7.62%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.86%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.86%
Sand	Environmental → Terrestrial → Soil → Sand	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.90%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.90%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.90%
Pond	Environmental → Aquatic → Freshwater → Pond	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.62%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.81%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.86%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.90%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	1.90%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.95%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.95%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.95%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.95%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.52%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.71%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.76%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.81%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.86%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.86%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.86%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.90%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	1.90%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.90%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.90%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.95%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.95%
Contaminated Water	Environmental → Aquatic → Freshwater → Pond → Sediment → Contaminated Water	0.95%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.95%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.95%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.95%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300003371	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM	Host-Associated	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005213	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012173	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012494	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610	Host-Associated	Open in IMG/M
3300012499	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610	Environmental	Open in IMG/M
3300012512	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510	Host-Associated	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014053	Contaminated water microbial communities from Hexachlorocyclohexane (HCH) contaminated sediment in Lucknow, India - Pond Sediment	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014867	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT433_16_10D	Environmental	Open in IMG/M
3300014879	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300027163	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033813	Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_08626693	2228664021	Soil	MGRLSREILGLLTILTFGLLPAGQAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVTPTFFPKTD
F14TC_1007391742	3300000559	Soil	MTKAFTRSSSLLLLTLTLAFLWGGEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVIPTFFPKTDLAVQAVVAGEADMG
JGI11643J12802_113870162	3300000890	Soil	SFLRLSALAVGLAVGLAWAASAQAQKKVRFAYPSSADMGDVPSLLAWEQLKKQGIEVVPTFFPRTDLAVQAVVA
JGI10214J12806_104666331	3300000891	Soil	MGRLSREILGLLTILTFGLLPAGQAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVTPTFFPKT
JGI26145J50221_10162011	3300003371	Arabidopsis Thaliana Rhizosphere	MSNSLAKISVLILLITVFWTWGAEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQG
JGI25407J50210_101317691	3300003373	Tabebuia Heterophylla Rhizosphere	MTKAFTGLCVLLLMLTLGLFWGAEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVIPT
Ga0055472_102098081	3300003998	Natural And Restored Wetlands	MSHSLAKLSVLILLITVFLTWGADAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFF
Ga0055469_103137522	3300003999	Natural And Restored Wetlands	MIKSFARLWPFLLMLTLGFIWVGVAEAQKKVRFAYPSSADMGDVPSLLAWEQL
Ga0062591_1019838972	3300004643	Soil	MTRSFLRLSALAVGLAVGLAWAASAQAQKKVRFAYPSSADMGDVPSLLAWEQLKKQGIEVVPTFFPRTDLAVQAVVAGEADLGSAA
Ga0062594_1023588691	3300005093	Soil	MTTLSRGFLGLLIILTSGFFPAGQAQAQNKVRFAYPSSADMGDIPSLLAWEQLKKQGIE
Ga0068998_101783251	3300005213	Natural And Restored Wetlands	MTRLSVKLSALAAVLAVGLALAAPAQAQKKVRFAYPSSADMGDVPSLLAWEQLKKQGIEVVPTFFPRTDLAVQAVVAGEA
Ga0065712_104031511	3300005290	Miscanthus Rhizosphere	MTRSFAKLSALMLVLLAGLIFFSDPAQAQRKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKTDLAVQAVMAG
Ga0065715_105265641	3300005293	Miscanthus Rhizosphere	MINSLAKLLTLLLITIVAFICAGEVQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKTELAVQAVAAGEAD
Ga0065705_106829142	3300005294	Switchgrass Rhizosphere	MTHALAKISLLLLIIAVGSIWDAEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFF
Ga0065707_102098233	3300005295	Switchgrass Rhizosphere	MTKAFTRSSSLLLLTLTLGFLWGGEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVIPTFFPKTDLAVQAVVAG
Ga0070658_100634204	3300005327	Corn Rhizosphere	MNNPLVKLTTLLVVATMLFAWGTEARAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKTELAVQAVAAGEAD
Ga0070680_1005122172	3300005336	Corn Rhizosphere	MTTSLAKISLLLLIVAVGFVSHGEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIE
Ga0070668_1008651851	3300005347	Switchgrass Rhizosphere	MTKSFAKLSVLLLVLTLGLIGSRDAHAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGI
Ga0070704_1009481002	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MLMTNPLEKLSMLLLIITVGFTWVTEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQG
Ga0070702_1001408754	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MNNPLVKLTTLLVVATMLFAWGTEARAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEV
Ga0066903_1069500861	3300005764	Tropical Forest Soil	MRNSFAKLLFVFLLITACIGWGTNAVAQRKVRFAYPSSADMGDIPSLVAWEQLKKQGIEVVP
Ga0081538_100811493	3300005981	Tabebuia Heterophylla Rhizosphere	MSKPFAGSSVLLLIFILSLLWGGEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVIPTFFP
Ga0066696_106117802	3300006032	Soil	MHKSFVKLGPLFLALALGFIWGGEARGQKTVRFAYPSSADMGDVPSLLAWEQLK
Ga0079222_101474063	3300006755	Agricultural Soil	MTNSRAKLLTLLLITIVSFIWTGEALAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKTELAVQAVA
Ga0079222_108752962	3300006755	Agricultural Soil	MTRSFAKLSALMLVLLAGLIFFSDPAQAQRKVRFAYPSSADMGDIPSLLAWEQL
Ga0075428_1007829122	3300006844	Populus Rhizosphere	MGRLIRGFLGLLALLIFEFFPPSEAHAQKRVRFAYPSSADMGDIPSLLAWEQLKKQGIEVTPTFFPKTDLAVQA
Ga0075430_1016775631	3300006846	Populus Rhizosphere	MGRLIRGFLGLLALLIFEFFPPSEAHAQKRVRFAYPSSADMGDIPSLLAWDELKKQGIEVLPTFFPKTDLAVQAVV
Ga0075431_1018237261	3300006847	Populus Rhizosphere	MTNSFARLSVFLLIFLIGLIFGGEAQAQKKVRFAYPSSADMGDIPSFLAWEQLKKQGIEVVPTFFPKTD
Ga0075436_1002650203	3300006914	Populus Rhizosphere	MNNPLVKLTTLLVVATMLFAWGTEARAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVP
Ga0075419_104721842	3300006969	Populus Rhizosphere	MGKMTRGLLAVSLILTLGFLYSGEVQAQKKLRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFP
Ga0075419_109103342	3300006969	Populus Rhizosphere	MTKAFTRSSSLLVLTLTLGFLWEGEVHAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVIPTF
Ga0079218_100031047	3300007004	Agricultural Soil	MKSICGLSVLIVIMLGFISGSEAQAPKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKTDLAVQAVVAG
Ga0075435_1019909002	3300007076	Populus Rhizosphere	MTKSFAKLSVLLLVLTLGLIGSRDAHAQKKVRFAYPSSADMGDISSLLAWEQLKKQGIEV
Ga0105098_107913361	3300009081	Freshwater Sediment	MMKSVCGLSVLIVIMLGFISGSEAQAPKKVRFAYPSSADMGDIPSLLAWEQLKKQ
Ga0105107_104811032	3300009087	Freshwater Sediment	MAKSIRGLLGSLLIVIFGLVPSSEAQAQKKVRFAYPSSADMGDIPSLLAWEHLKKQGIEVVPTFFPKTDLAVQAVV
Ga0111539_104773331	3300009094	Populus Rhizosphere	MGKMTRGLLAVSLILTLGFLYSGEVQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKTELAVQAVVAGEAD
Ga0066709_1046154532	3300009137	Grasslands Soil	MHKSFVKLGPLFLALALGFIWGGEARAQKTVRFAYPSSADMGDVPSLLAWEQLKAQGIQVTPKFFPKTDLAVQAVVAGEADIGSVAGMA
Ga0105092_102668002	3300009157	Freshwater Sediment	MLKRVARLSALLGIVTFGLFWSGEVMAQKKVRVAYPSSVDMGDIPSLLAWEQLKKQGIEVVPHYFPKTDLAV
Ga0105252_105015311	3300009678	Soil	LSALTIGLAVGLALAAPAQAQKKVRFAYPSSADMGDVPSLLAWEQLKKQGIEVVPTFFPRTDLAVQAVVAGEADLGSAAGIAVVKAV
Ga0126374_101441721	3300009792	Tropical Forest Soil	MKKISAAVALLLVLGFLYGDEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVIPTFFPKTELAVQAVVAGEADLGTA
Ga0126380_104535301	3300010043	Tropical Forest Soil	MTKAFARSSVLLLTFILGFLWGAEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKTDLAVHAVVAGE
Ga0134109_100749583	3300010320	Grasslands Soil	MHKSFVKLGPLFLALALGFIWGGEARGQKTVRFAYPSSADMGDVPSLLAWKQLKAQGIQVTPKFFPK
Ga0134064_100165811	3300010325	Grasslands Soil	MHKSFVKLGPLFLALALGFIWEGEARGQKTVRFAYPSSADMGDVPSLLAWEQLKAQGIQVTPKFFPKTDLAVQAVVAGEA
Ga0134111_100143934	3300010329	Grasslands Soil	MHKSFVKLGPLFLALALGFIWGGEARAQKPVRFAYPSSADMGDVPSLLAWEQLKAQGIQVTPKFFPKTDLAVQAV
Ga0134066_102565131	3300010364	Grasslands Soil	MHKSFVKLGPLFLALALGCIWGGEARGQKTVRFAYPSSADMGDVPSLLAWE
Ga0134124_123116681	3300010397	Terrestrial Soil	MINSLAKLLTLLLITIVGFIWTGEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKTELAVQAVAAGEA
Ga0137327_10566292	3300012173	Soil	MAKLFARLSALGLILTIGFIWVGVADAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVIPTFF
Ga0137378_111198532	3300012210	Vadose Zone Soil	MHKSFVKLGPLFLALALGFIWGGEARAQKTVRFAYPSSADMGDVPSLLAWEQLKAQGIQVTPKF
Ga0137372_111923361	3300012350	Vadose Zone Soil	MHKSFVKLGPLFLALALGFIWGGEARAQKTVRFAYPSSADMGDVPSLLAWEQLKAQGIQ
Ga0157341_10048472	3300012494	Arabidopsis Rhizosphere	MTKSFAKLAVLLLVLTLGLIGSRDAHAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGI
Ga0157350_10466442	3300012499	Unplanted Soil	MINSLAKLLTLLLITIVGFIWTGEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKTELAVQAVAAGE
Ga0157327_10915651	3300012512	Arabidopsis Rhizosphere	MINSLAKLLTLLLITIVAFIWTGEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQG
Ga0157330_10197661	3300012514	Soil	MTKSFAKLAVLLLVLTLALVWSREAQAQKKVRFAYPSSADMGDIPSLLAWELLKKQGIEV
Ga0157352_10015972	3300012519	Unplanted Soil	MTKSFAKLAVLLLVLTLALVWSREAQAQKKVRFAYPSSADMGDIPSLLAWE*
Ga0153915_100248761	3300012931	Freshwater Wetlands	MTRSFARTAALFAVLTLGLIGGGEAQAQKKVRFAYPSSADMGDVPSLLAWEQLKKQGIEVVPTFFPKTDLAVQAVVAGEADIGSAAGIA
Ga0153915_113202731	3300012931	Freshwater Wetlands	MKRLWTTLAAFLLIITLSFAGSGAAYAQKKIKFAYPSSADMGDIPSLLAWEQLKKQGIEITPQFFPKT
Ga0126369_102432823	3300012971	Tropical Forest Soil	MKKISAAVALLLVLGFLCGDEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVIPTFFPKTELAVQAVVAGEADLGTA
Ga0119956_10212182	3300014053	Contaminated Water	MTGSLSRFWIGLIVLAVALTCADAASAQRKVRFAYPSSADLGDIPSLLAWEQLKKQGIEVVPTFFPKTDLAVQAVVAG
Ga0134078_101511952	3300014157	Grasslands Soil	MHKSFVKLGPLFLALALGFIWGGEARGQKTVRFAYPSSADMGDVPSLLAWEQL
Ga0075324_10658281	3300014263	Natural And Restored Wetlands	MSNSLAKISVLILLITVFWTWGAEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKTEL
Ga0180076_10797271	3300014867	Soil	MTKLFARLTTLVLALMVIGGAEAQAQKKVRFAYPSSADMGDVPSLLAWEQLKKQGIEVVPMFFPKTDLAVQA
Ga0180062_11444271	3300014879	Soil	MAKLFARLSALGLILTIGFIWVGVADAQKKVRFAYPSSADMGDIPSLLAW
Ga0132258_136326051	3300015371	Arabidopsis Rhizosphere	MSNSFGKLLFVFLLITACIGWSTDAVAQRKVRFAYPSSADMGDIPSLVAWEQLKKQ
Ga0187776_115800921	3300017966	Tropical Peatland	MTRAFGRLSVLLLIFSLGFIWGGQAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVIPTFFPRTDLAVQAVVAGEADM
Ga0184635_100018448	3300018072	Groundwater Sediment	MTKSFAKLSVLLLVLTLGLLWSREAQAQKKVRFADPSSADMGDIPSLLG
Ga0184609_100657021	3300018076	Groundwater Sediment	MATSLARLTGLLLILTLGCVWSSEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKTDLAVQAVVAGE
Ga0184612_105465541	3300018078	Groundwater Sediment	MLKRVARLSALLGIFTFGLFWSGEVMAQKKVRVAYPSSVDMGDIPSLLAWEQ
Ga0184625_101304703	3300018081	Groundwater Sediment	MIKSFARLSALGLMLILGFLWGGEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVIPTFFPKTDLAVQAVVA
Ga0190265_110382692	3300018422	Soil	MKSICGLSVLIVIMLGFISGSEAQAPKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKTDLAVQ
Ga0190265_110815862	3300018422	Soil	MLRSICGLSVLILMLGFISGSEAQAPKKVRFAYPSSADIGDIPSLLAWEQLKKQGIEVVPTFFPKT
Ga0190265_112240391	3300018422	Soil	MVKSIFRRSGLVLIIALSLTWAGEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKT
Ga0190265_125477231	3300018422	Soil	MAHSLARLSMLLLTIAIGFASNSEAQAPKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKTDLAVQ
Ga0190272_126464622	3300018429	Soil	MAKSIRGLLGLFLIVTLGLVPGSEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPNFFPKTDLAVQAVVAG
Ga0210378_100145601	3300021073	Groundwater Sediment	MSKPIARLSILFLIIGVSFFWGSEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGI
Ga0193719_101138963	3300021344	Soil	MIKAFTRSSVLLLVLALGFLWGGEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGI
Ga0209431_107699211	3300025313	Soil	MTRSFARIGALFAVLTLGLIGGGEAQAQKKVRFAYPSSADMGDVPSLLAWEQLKKQGIEVVPTFFPKTDLAVQ
Ga0207660_107646421	3300025917	Corn Rhizosphere	MTTSLAKISLLLLIVAVGFVSHGEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKT
Ga0207652_107712182	3300025921	Corn Rhizosphere	MNNPLVKLTTLLVVATMLFAWGTEARAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTF
Ga0207659_112677691	3300025926	Miscanthus Rhizosphere	MINSLAKLLTLLLITIVAFICAGEVQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKTELAVQA
Ga0207668_112697491	3300025972	Switchgrass Rhizosphere	MTKSFAKLSVLLWVLTLGLIGSRDAHAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIE
Ga0207640_109193352	3300025981	Corn Rhizosphere	MNNPLVKLTTLLVVATMLFAWGREARAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKTELAVQAVA
Ga0207675_1013301552	3300026118	Switchgrass Rhizosphere	MTKSFAKLSVLLLVLTLGLLWSREAQAQKKVRFAYPSSADMGDIPSLLAWE
Ga0209438_10602593	3300026285	Grasslands Soil	MGKLTRGLLAVSLIITLGFLYSGEVQAQKKMRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPRTDLAV
Ga0209265_12419751	3300026308	Soil	MHKSFVKLGPLFLALALGFIWGGEARGQKTVRFAYPSSADMGDVPSLLAWEQLKA
Ga0209803_10938013	3300026332	Soil	MHKSFVKLGPLFLALALGFIWGGEARAQKTVRFAYPSSADMGDVPSLLAWEQLKAQGIQVTPKFFPKTDLAVQAVV
Ga0209878_10336851	3300027163	Groundwater Sand	MTKAFARSSVLLLMLTLGFLWGAEAQAQKKVRFAYPSSADMGDIPSLLAWEQLRKQGIEVIPTFFPKTDLAVQAVVAGEADM
Ga0208685_10329891	3300027513	Soil	MTRSSVRLAALAAGLAVGLALAAPAQAQKKVRFAYPSSADMGDVPSLLAWEQLKKQGIEVVPTFFPRTDLAVQAVVAGEADLGSA
Ga0209887_10937152	3300027561	Groundwater Sand	MTKPLRKLGSFILIVGLGVIWEGQAYAQKKVRFAYPSSADMGDIPSLLAWEQLKAQGIEVIPKFFPKTDLAVQAVVAGEA
Ga0209819_100253641	3300027722	Freshwater Sediment	MTKTFAGSSVVVLMLTLGFLWGGEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKHGIE
Ga0209819_100685111	3300027722	Freshwater Sediment	MLKRVARLSALLGIVTFGLFWSGEVMAQKKVRVAYPSSVDMGDIPSLLAWEQLKKQGIEV
Ga0209074_102989381	3300027787	Agricultural Soil	MTNSRAKLLTLLLITIVSFIWTGEALAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKTELAVQAVAAGEAD
Ga0209683_101761782	3300027840	Wetland Sediment	MTQSFARFSAIVIALAMGLALAAPAQAQKKVRFAYPSSADMGDVPSLLAWEQLKKQGIEVVPTFF
Ga0207428_106219581	3300027907	Populus Rhizosphere	MTKAFFRSSTLLCLMLTLGFLWGGEAQAQKKVRFAYPSSADMGDIPSLLAWEQL
Ga0209853_10760991	3300027961	Groundwater Sand	MTKAFARSSVLLLMLTLGFLWGAEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVIPTFFPKTDLAVHAVVAGEADIGSAAGI
Ga0307498_100104751	3300031170	Soil	MTKSFAKLSVLLLVLTLGLLWSTEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKT
Ga0307469_114420031	3300031720	Hardwood Forest Soil	MTKAFTRSSSLLLLTLTLAFLWGGEAQAQKKVRFAYPSSADMGDIPSLLAWE
Ga0310884_104073052	3300031944	Soil	MTRSFLKLSALAVGFAVGLALAAPAHAQKKVRFAYPSSADMGDVPSLLAWEQLKKQGIEVVPTFFPRTDLAVQAVVAGEADLGS
Ga0326597_102610921	3300031965	Soil	MTKLFVRSALFVLLIALAVAVAGEARAQKKVRFAYPSSADMGDVPSLLAWEQLKAQGIEVIPT
Ga0307416_1006616623	3300032002	Rhizosphere	MKSICGLSVLIVIMLGFISGSEAQAPKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPKTD
Ga0307411_110767592	3300032005	Rhizosphere	MTRSCVRISTLVVGFAVALLSAGPAQAQKKVRFAYPSSADMGDVPSLLAWEQLKKQGIEVVPTFF
Ga0307415_1019332342	3300032126	Rhizosphere	MMKSICGLSVLIVIMLGFISGSEAQTPKKVRFAYPSSADMGDIPSLLAWEQLKKQGIE
Ga0310810_108408321	3300033412	Soil	MINSLAKLLTLLLITIVAFIWTGEAQAQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEV
Ga0214471_101113301	3300033417	Soil	MLDMLAKWSVLLGIFTFGLLLSGEVMAQKKVRVAYPSSVDMGDIPSLLAWEQLKKQGIE
Ga0364928_0073647_592_777	3300033813	Sediment	MTKSFARIAALFAVLTLGLIGGGEAQAQKKVRFAYPSSADMGDVPSLLAWEQLKKQGIEVVP
Ga0364933_184675_1_234	3300034150	Sediment	MTNSLAKLSVLLLIVTVGLTWTTDAQGQKKVRFAYPSSADMGDIPSLLAWEQLKKQGIEVVPTFFPRTDLAVQAVVAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095305

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences