NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F095260

Metagenome Family F095260

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F095260
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 51 residues
Representative Sequence VPQYFFTIHRGDRVEDDPDGTYLPDVAAALSYAEHTIRELRKKSGYNDLA
Number of Associated Samples 68
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 87.38 %
% of genes near scaffold ends (potentially truncated) 95.24 %
% of genes from short scaffolds (< 2000 bps) 83.81 %
Associated GOLD sequencing projects 59
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (75.238 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(36.191 % of family members)
Environment Ontology (ENVO) Unclassified
(66.667 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(60.952 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 24.36%    β-sheet: 2.56%    Coil/Unstructured: 73.08%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF12849PBP_like_2 3.81
PF00196GerE 1.90
PF04519Bactofilin 1.90
PF13545HTH_Crp_2 0.95
PF00027cNMP_binding 0.95
PF08007JmjC_2 0.95
PF01381HTH_3 0.95
PF04773FecR 0.95
PF01068DNA_ligase_A_M 0.95
PF14023DUF4239 0.95
PF13378MR_MLE_C 0.95
PF01717Meth_synt_2 0.95
PF07859Abhydrolase_3 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG1664Cytoskeletal protein CcmA, bactofilin familyCytoskeleton [Z] 1.90
COG0620Methionine synthase II (cobalamin-independent)Amino acid transport and metabolism [E] 0.95
COG0657Acetyl esterase/lipaseLipid transport and metabolism [I] 0.95
COG1423ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) familyReplication, recombination and repair [L] 0.95
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 0.95
COG2850Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domainTranslation, ribosomal structure and biogenesis [J] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A75.24 %
All OrganismsrootAll Organisms24.76 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005332|Ga0066388_100118434All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3163Open in IMG/M
3300005332|Ga0066388_100806098Not Available1531Open in IMG/M
3300005332|Ga0066388_102368450Not Available962Open in IMG/M
3300005332|Ga0066388_105624959All Organisms → cellular organisms → Bacteria → Proteobacteria634Open in IMG/M
3300005332|Ga0066388_105657564All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini632Open in IMG/M
3300005764|Ga0066903_101040902Not Available1502Open in IMG/M
3300005764|Ga0066903_103088650Not Available901Open in IMG/M
3300005764|Ga0066903_106532369Not Available607Open in IMG/M
3300005764|Ga0066903_106879712Not Available590Open in IMG/M
3300005764|Ga0066903_108655420Not Available518Open in IMG/M
3300006057|Ga0075026_100541994Not Available676Open in IMG/M
3300006791|Ga0066653_10535255Not Available593Open in IMG/M
3300006800|Ga0066660_10957785Not Available692Open in IMG/M
3300010048|Ga0126373_10649247All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1111Open in IMG/M
3300010048|Ga0126373_10667446Not Available1096Open in IMG/M
3300010048|Ga0126373_11331198All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → Alsobacter soli784Open in IMG/M
3300010359|Ga0126376_12487280Not Available565Open in IMG/M
3300010361|Ga0126378_10992998Not Available943Open in IMG/M
3300010361|Ga0126378_11963267Not Available667Open in IMG/M
3300010376|Ga0126381_103746333Not Available594Open in IMG/M
3300010863|Ga0124850_1042464All Organisms → cellular organisms → Bacteria1444Open in IMG/M
3300012208|Ga0137376_10621273All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300012971|Ga0126369_10830921Not Available1007Open in IMG/M
3300016270|Ga0182036_10753887Not Available790Open in IMG/M
3300016294|Ga0182041_11788004Not Available570Open in IMG/M
3300016341|Ga0182035_10186300Not Available1630Open in IMG/M
3300016341|Ga0182035_10973183Not Available751Open in IMG/M
3300016341|Ga0182035_11517505Not Available603Open in IMG/M
3300016341|Ga0182035_12029064Not Available523Open in IMG/M
3300016357|Ga0182032_10783341Not Available805Open in IMG/M
3300016357|Ga0182032_10822737All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium786Open in IMG/M
3300016357|Ga0182032_11629249Not Available562Open in IMG/M
3300016357|Ga0182032_11669802Not Available555Open in IMG/M
3300016371|Ga0182034_10948806Not Available741Open in IMG/M
3300016371|Ga0182034_11200176All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium660Open in IMG/M
3300016387|Ga0182040_10401346Not Available1076Open in IMG/M
3300016387|Ga0182040_10492834Not Available978Open in IMG/M
3300016404|Ga0182037_10103568Not Available2055Open in IMG/M
3300016422|Ga0182039_10932923Not Available776Open in IMG/M
3300016422|Ga0182039_11956111Not Available539Open in IMG/M
3300016445|Ga0182038_11739950Not Available562Open in IMG/M
3300017955|Ga0187817_10953144Not Available549Open in IMG/M
3300017955|Ga0187817_10995257Not Available537Open in IMG/M
3300017994|Ga0187822_10111502Not Available845Open in IMG/M
3300017999|Ga0187767_10064005All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WD16945Open in IMG/M
3300018060|Ga0187765_10220244All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WD161105Open in IMG/M
3300021560|Ga0126371_11396216Not Available831Open in IMG/M
3300027050|Ga0209325_1045643Not Available530Open in IMG/M
3300031231|Ga0170824_112404635Not Available1276Open in IMG/M
3300031543|Ga0318516_10625388Not Available614Open in IMG/M
3300031561|Ga0318528_10684718All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense549Open in IMG/M
3300031573|Ga0310915_10063201All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2420Open in IMG/M
3300031680|Ga0318574_10230070All Organisms → cellular organisms → Bacteria → Proteobacteria1070Open in IMG/M
3300031682|Ga0318560_10052503Not Available2013Open in IMG/M
3300031715|Ga0307476_11067516Not Available594Open in IMG/M
3300031723|Ga0318493_10447464Not Available710Open in IMG/M
3300031736|Ga0318501_10603283Not Available603Open in IMG/M
3300031744|Ga0306918_11132644Not Available605Open in IMG/M
3300031744|Ga0306918_11505071Not Available514Open in IMG/M
3300031753|Ga0307477_10718400Not Available667Open in IMG/M
3300031770|Ga0318521_11051131All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria500Open in IMG/M
3300031771|Ga0318546_10173150Not Available1464Open in IMG/M
3300031778|Ga0318498_10369506All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300031781|Ga0318547_10141690Not Available1408Open in IMG/M
3300031821|Ga0318567_10179007Not Available1180Open in IMG/M
3300031833|Ga0310917_10177656Not Available1416Open in IMG/M
3300031833|Ga0310917_10725450Not Available672Open in IMG/M
3300031879|Ga0306919_10113673Not Available1926Open in IMG/M
3300031890|Ga0306925_10148062All Organisms → cellular organisms → Bacteria2525Open in IMG/M
3300031890|Ga0306925_10206457Not Available2119Open in IMG/M
3300031890|Ga0306925_10296244Not Available1740Open in IMG/M
3300031890|Ga0306925_12018642Not Available543Open in IMG/M
3300031896|Ga0318551_10111576Not Available1465Open in IMG/M
3300031910|Ga0306923_10015385All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales7934Open in IMG/M
3300031910|Ga0306923_11002116Not Available907Open in IMG/M
3300031910|Ga0306923_11957572Not Available596Open in IMG/M
3300031912|Ga0306921_10170182All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68602551Open in IMG/M
3300031912|Ga0306921_10427612Not Available1544Open in IMG/M
3300031912|Ga0306921_10501956Not Available1410Open in IMG/M
3300031941|Ga0310912_10107664Not Available2063Open in IMG/M
3300031942|Ga0310916_11052284Not Available677Open in IMG/M
3300031945|Ga0310913_10783707Not Available673Open in IMG/M
3300031946|Ga0310910_10105111All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2102Open in IMG/M
3300031954|Ga0306926_10244367Not Available2225Open in IMG/M
3300032001|Ga0306922_11820187Not Available599Open in IMG/M
3300032035|Ga0310911_10041530All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2356Open in IMG/M
3300032035|Ga0310911_10069689All Organisms → cellular organisms → Bacteria → Proteobacteria1875Open in IMG/M
3300032041|Ga0318549_10334873Not Available682Open in IMG/M
3300032042|Ga0318545_10019888All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2127Open in IMG/M
3300032042|Ga0318545_10289142Not Available589Open in IMG/M
3300032044|Ga0318558_10617219Not Available542Open in IMG/M
3300032051|Ga0318532_10125501Not Available909Open in IMG/M
3300032059|Ga0318533_10613431Not Available798Open in IMG/M
3300032066|Ga0318514_10719519Not Available531Open in IMG/M
3300032076|Ga0306924_11105204Not Available864Open in IMG/M
3300032091|Ga0318577_10067886All Organisms → cellular organisms → Bacteria → Proteobacteria1629Open in IMG/M
3300032180|Ga0307471_103767621Not Available536Open in IMG/M
3300032261|Ga0306920_100261107All Organisms → cellular organisms → Bacteria → Proteobacteria2583Open in IMG/M
3300032261|Ga0306920_100287771Not Available2449Open in IMG/M
3300032261|Ga0306920_101451275Not Available981Open in IMG/M
3300032261|Ga0306920_104164233Not Available522Open in IMG/M
3300033289|Ga0310914_10160365All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1990Open in IMG/M
3300033289|Ga0310914_11824814Not Available512Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil36.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil30.48%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil10.48%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil9.52%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.86%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.90%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.90%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.95%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.95%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.95%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.95%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010863Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)EnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300017999Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MGEnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300027050Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032042Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032051Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0066388_10011843413300005332Tropical Forest SoilMPRYFFTIQGQDRVEDDPDGTYLPDAEAALCYAEYTIRELRRKSGYNDLA
Ga0066388_10080609813300005332Tropical Forest SoilMLRYFFTIHRHGRAENDPDGTYLPDAEAALSYADCTIRELRKQGVYDDDLSLMMI
Ga0066388_10236845013300005332Tropical Forest SoilLLAETGRSMRRYFFTVHGQDRVADDPEGTYLPDEAAALSYAEYTIRGLRKKSGYTYNNDPAL
Ga0066388_10562495923300005332Tropical Forest SoilMPRYFFTIHRGDRIKDDPDGTYLPDVAAALSYAEHTIRELRKKSGYNDLAL
Ga0066388_10565756413300005332Tropical Forest SoilVLRYFFTIHGRDRVEDDPDGIDLPDAAAALSHAEHTIRELRKKSGYTYNNDPALMMFV
Ga0066903_10104090243300005764Tropical Forest SoilMPRYFFTIHGRAQVEDDPAGTYLPDAAAALSYAEHTIRELRKKSGYTYNNDPA
Ga0066903_10308865013300005764Tropical Forest SoilMPQYFFTIHGQDRVADDPEGTYLPDVAAALSYAEYTIRGLRKKSGY
Ga0066903_10653236913300005764Tropical Forest SoilVPQYFFTIHRGDRVEDDPDGTYLPDVAAALSYAEHTIRELRKKSGYNDLA
Ga0066903_10687971223300005764Tropical Forest SoilMRRYFFTVHGQDRVADDPEGTYLPDEAAALSYAEYTIRGLRKKSGYTYNNDPALMMIVK
Ga0066903_10865542013300005764Tropical Forest SoilMPRYFFTIHGRAQVEDDPVGTYLPDRAAALSYAEYTIQELRKKSGYNDPGSHDDDKG*
Ga0075026_10054199423300006057WatershedsMPRYFFTIHRQDRVENGPDGAYLPDAEAALSYADYTIRGLRKKSGYE
Ga0066653_1053525513300006791SoilVPRYFFTIHGRDRVEDDHDGTYLPDVAAALSYAEHTIRDLRKESGYKDDPALM
Ga0066660_1095778523300006800SoilVAQYFFTIHGGDRVEDDPDGTYLPDVAAALSYAEHTIRELRKESGYKDDLALMMIVT
Ga0126373_1064924713300010048Tropical Forest SoilMPRYFFTIYGRAKVDDDRAGTDLPDVAAALSYAEYTIRELRKKSGYKNDLALMM
Ga0126373_1066744613300010048Tropical Forest SoilMPRYSFTIHGRDRVADDPDGTYLPDEAAALSYAEYTIRELRKKSGYKNDLALMMFVK
Ga0126373_1133119813300010048Tropical Forest SoilMPRYFFTIHRQHRVENDHAGTYLPNVAAALSYAEDTIWELRKQNGYKDDLSLMMMVRD
Ga0126376_1248728013300010359Tropical Forest SoilVPQYFFTIHRGNRVKDDPDGTYLPDLAAALSYAEHTIQELRKKSGYDDLT
Ga0126378_1099299813300010361Tropical Forest SoilVDQVEHDPDGTYLRNVAEALSHAEYTIREQRKKSSYNDLALMMIVTDQSR
Ga0126378_1196326713300010361Tropical Forest SoilVPQYFFAIHKGDRIKDDPDGTYLPDVMAALSYAEHTIRELRKKSGYDDLDLMMFVTDQS
Ga0126381_10374633323300010376Tropical Forest SoilMPRYFFSIHGRAEVDHDPADTYLPDVAAALSYAEHKIQELREKSDYNDPALMM
Ga0126381_10459344833300010376Tropical Forest SoilMPRYFFTIHGRAKIEDDPAGTYLPDVAAPLSYAEHTIRELCKKSG
Ga0124850_104246443300010863Tropical Forest SoilMPRYFFTIHREDRTQNDPDGTYLSDAEAALSYADYTIRELRKKSVYKDD
Ga0137376_1062127313300012208Vadose Zone SoilVPQYFFTIHGRERVEDDRSGTYLPDVAAALSYAEHTIRVLRNESGYKDD
Ga0126369_1083092113300012971Tropical Forest SoilMPGYFFTIHRQDRVENAADTYLPDVPAALSYAEDTIRGLRKQNGYKDN
Ga0182036_1075388723300016270SoilVPRYFFTIHRRDRVEDDPDGTYLPDAETALCYADYTIRELRKKSAYKDDLTL
Ga0182041_1178800413300016294SoilVPRYFFTIHRRDRVEDDPDGTHLPDVAAALSYGEYTIRELRKKSG
Ga0182035_1018630013300016341SoilVPQYFFTIHRGNRVKDDADGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVMDQ
Ga0182035_1097318313300016341SoilVPRYFFRIHREHRVEDDPDGTYLPDDTAALSYAEHTIRELRKKSGYTYNNDPA
Ga0182035_1151750523300016341SoilMPRYFFTTHGRAKVEDDPAGTDLPDVAAALSYAEYTIRELR
Ga0182035_1202906413300016341SoilMPRYSFTIHRQDRVENHLGDTYLPDVAAALSYAEDTIRELRKQNGYKDDLSL
Ga0182032_1078334113300016357SoilVPRYFFTIHGRNRLEDDRDGTYLPDVAAALSYAEYTIRELRKKSG
Ga0182032_1082273713300016357SoilMPRYSFTIHRQDRVENHPGDTYLPNVAAALSYAEDTIRELRKQNGYKDDLSLMMMVKD
Ga0182032_1162924923300016357SoilMPQYFFTIHGRAKVDDDRAGTDLPDVAAALSYAEYTIRELRKK
Ga0182032_1166980223300016357SoilVPQYFFTIHRGDRVEDDPDGTYLPDVAAALSYAEHTIRELRKK
Ga0182034_1094880613300016371SoilVPQYFFTIHRGDRVEDDPDSTYLPDVTAALSYAEHTIQELRKKSGYNDLA
Ga0182034_1120017613300016371SoilSLETGRSMPRYFFTIHGLDRVADDPEGTYLPDEAAALSYAEYTIRELRKKSGYNRPA
Ga0182040_1040134633300016387SoilVPQYFFTIHRGNRVKDDADGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVMD
Ga0182040_1049283413300016387SoilVPKYFFTIHRGNRVKDDLDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVMDQ
Ga0182037_1010356813300016404SoilVPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMF
Ga0182039_1093292313300016422SoilVPRYSFTIHGRDRVADDPDGTYLPDVAVALSYAEYTIRELRKKSGYKNDLALMM
Ga0182039_1195611123300016422SoilMPRYFFTIHGRAQVEDDPAGTYLPDAAAALSYAEHTIRELRKKSGYNDLALMM
Ga0182038_1173995033300016445SoilMPRYFFTIHGRAQVEDDPVGTYLPDRAAALSYAEYTIRELRKKSGYN
Ga0187817_1095314413300017955Freshwater SedimentMSERLMPRYFFTIHGRAKIEDDRAGTYLPDVEAAFSYAEYTIRELRKKSGYNDPALMMII
Ga0187817_1099525713300017955Freshwater SedimentMPRYFFTIHGREQDDPDGTYLPDVAAALSYAEYTIRELRKKSGYNDLALMMMVNDEA
Ga0187822_1011150213300017994Freshwater SedimentMPRYFFTIHKQDRVEDDPGGTYLPDAEAALSYAEYTIRELRKKSGYKDDL
Ga0187767_1006400513300017999Tropical PeatlandMECSVYRYFFTIRGPDRVEDDPDGAYLPDAAAALTYAEYTIRELRKKDGWNDP
Ga0187765_1022024413300018060Tropical PeatlandMECSVHRYFFTIRGPDRVEDDPDGAYLPDAAAALTYAEYTIRELRKKDGWNDP
Ga0126371_1139621633300021560Tropical Forest SoilVPQYFFTIHRGDRVEDDRDGTYLPDDTAALSYAEHTIWGLRKKSGY
Ga0209325_104564323300027050Forest SoilMPRYFFTIHRQDRVENGPDGAYLPDAEAALSYADYTIRGLRKKRAATRMICL
Ga0170824_11240463523300031231Forest SoilVAQYFFTIHGGDRVEDDPDGTYLPDVAAALSYAEHTIRELRKESGYKDDLALMMIVTDH
Ga0318516_1062538813300031543SoilVPRYFFTIHRRDRVEDDPDGTHLPDVAAALSYGEYTIRELRKKSGYTYNNDP
Ga0318528_1068471813300031561SoilMPQYFFTIHGREQVEDDPAGTCLPNVEAALSHAEYIIRELRKK
Ga0310915_1006320113300031573SoilMPRYFFTTHGRAKVEDDPAGTDLPDVSAALSYAEYTIRELRNKS
Ga0318574_1023007023300031680SoilMPQYFFTIHGREQVEDDPAGTYLPNVEAALSHAEYIIRELRKRAATGIIWL
Ga0318560_1005250343300031682SoilMPRYFFTIQRQDRVENYPGDAYLPDVAAALSYADDTIQELRKQNGYKDDLSLMM
Ga0307476_1106751623300031715Hardwood Forest SoilMPRYFFTIRRQDRFENGPDSAYLPDAEAALSYADYAIRGLRKKSGYEDDLSLMM
Ga0318493_1044746423300031723SoilMPRYFFTIHRQDRVEDDRDGTYLPDADAALSYADYTIRELRKKSGYKDDL
Ga0318501_1060328313300031736SoilMPRYFFTIHRQDRAQNDPDGTYLPDAEAALSYADHTIQELRKKNAYEGD
Ga0306918_1113264433300031744SoilMPRYSFTIHRQDRVENHPGDTYLPNVAAALSYAEDTIRELRKQNGYKDD
Ga0306918_1150507113300031744SoilMPRYFFTIHRQDRVENDHAGTYLPDVAAALSYAEYTIRELRKQNGYKDDLALMMMVKEA
Ga0307477_1071840013300031753Hardwood Forest SoilMPRYFFTIDRQDRVENGPDGAYLPDTEAALSYADYTIRGLRKKSGYEDEVLSLPFFPGQ
Ga0318509_1007458413300031768SoilVPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKS
Ga0318521_1105113113300031770SoilVPQYFFTIHREDRVKDDLDGTYLPDVAAALSYAEHIIQELRKKSGYDDLALMMFVMD
Ga0318546_1017315033300031771SoilVPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVTDQS
Ga0318498_1036950613300031778SoilMPRYFFTIHGQDRVADDPEGTYLPDAAVALFYAEYTIRGLRKKSGYEDDLSLM
Ga0318547_1014169033300031781SoilMPRYFFTIHGQDRVADDPESTYLPDEAAALSYTEYKIRELRKKSGYTDSGSDDVRR
Ga0318567_1017900733300031821SoilMPRYFFTIHRQDRVEDDRDGTYLPDADAALSYADYTIRELRKKSGYK
Ga0310917_1017765613300031833SoilMRRYFFTIHGQDRVADDPEGTYLPDEAAALSYAEYTIRVLRKKSDYEDDLSLMMMV
Ga0310917_1072545013300031833SoilVPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVMDQ
Ga0306919_1011367313300031879SoilVPQYFFTIHRGNRVKDDADGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVMDQC
Ga0306925_1014806213300031890SoilVPRYFFTIHRRDRVEDDPDGTHLPDVAAALSYGEYTIRELRKKSGYKD
Ga0306925_1020645713300031890SoilMPRYSFTIHRQDRVENHLGDTYLPDVAAALSYAEDTIRELRKQNGYKDDLSLMMMV
Ga0306925_1029624443300031890SoilVPQYFFTIHRGNRVKDDADGTYLPDVAAALSYAEHTIQELRKKSGYDDL
Ga0306925_1201864213300031890SoilVPQYFFTIHRGDRVEDDPDSTYLPDVTAALSYAEHTIQELRKKSGYNDLALMMIV
Ga0318551_1011157613300031896SoilVPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMM
Ga0306923_1001538553300031910SoilMPQYFFTIHGREQVEDDPAGTCLPNVEAALSHAEYI
Ga0306923_1100211613300031910SoilVPRYFFTIHGRNRLEDDRDGTYLPDVAAALSYAEYTIRELRKKSGCNDLALMMFV
Ga0306923_1195757213300031910SoilVPQYFFTIHRGDRVEDDPDGTYLPDVAAALSYAEHTIRELRKKSGYNDLALM
Ga0306921_1017018233300031912SoilVPQYFFTIHRGDRVEDDPDSTYLPDVTAALSYAESTIRELQKKM
Ga0306921_1042761223300031912SoilVPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVT
Ga0306921_1050195613300031912SoilVPQYFFTIHRGDRVEDDPDGTYLPDVAAALSYAEHTIQELRKKSGYNDLALMMFVTDQST
Ga0310912_1010766453300031941SoilMPRYFFTTHGRAKVEDDPAGTDLPDVAAALSYAEYTIRELRNKSDYTYNND
Ga0310916_1105228413300031942SoilVPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVMDQC
Ga0310913_1078370723300031945SoilVPQYFFTIHRGDRVEDDPDSTYLPDVTAALSYAEHTIQELRKKS
Ga0310910_1010511113300031946SoilMPQYFFTIHGREQVEDDPAGTYLPNVEAALSHAEYIIR
Ga0306926_1024436753300031954SoilMPRYFFTTHGRAKVEDDPAGTDLPDVAAALSYAEYTIRELRNKSD
Ga0306922_1182018713300032001SoilMPRYFFTIHRRDRVENDPASTCLPDEAAALSYAEYTIRELRIQNGYKDDL
Ga0310911_1004153013300032035SoilMPQYFFTIHGREQVEDDPAGTYLPNVEAALSHAEYI
Ga0310911_1006968933300032035SoilVPQYFFTIHREDRVKDDLDGTYLPDVAAALSYAEHIIQELRKKSGYDDLALMMFVM
Ga0318549_1033487313300032041SoilVPRYFFTIHRRDRVEDDPDGTHLPDVAAALSYGEYTIRELRKKSGYT
Ga0318545_1001988843300032042SoilVPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVTD
Ga0318545_1028914213300032042SoilMPRYFFTIHRQDRAENDPEGTYLQDAEAALSYADYTIRELRKKSVYE
Ga0318558_1061721913300032044SoilMPQYFFTIHGREQVEDDPAGTCLPNVEAALSHAEYIIRELRKKSGYKD
Ga0318532_1012550123300032051SoilMPRYFFTIHGRAKIEDDPAGTYLPDVAAALSYAEYTIRELLKKSGYTYNNDPA
Ga0318533_1061343123300032059SoilVPRYFFTIHGRNRLEDDRDGTYLPDVAAALSYAEYTIRELRKKSGCNDLALMM
Ga0318514_1071951923300032066SoilVPRYFFRIHREHRVEDDPDGTYLPDDTAAISYAEHTIRELRKKSGYDDLSL
Ga0306924_1110520443300032076SoilMPRYFFTIQGRAQVEDDPVGTYLPDRAAALSYAEYTIRELRKKSGY
Ga0318577_1006788633300032091SoilMPRYFFTIHRQDRVEDDRDGTYLRNAEAALSYADYTIRELRKKSGYKDDLSL
Ga0307471_10376762113300032180Hardwood Forest SoilMPRYFFTIDRQDRVENGPDGAYLPDTEAALSYADYTIRGLRKKSGYEDE
Ga0306920_10026110713300032261SoilVPKYFFTIHRGNRVKDDLDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMF
Ga0306920_10028777113300032261SoilMRYFFTIHGQERVADDPEGTYLPDEAAALSYAEYTIRELRKKSVYNDLALMMFVKD
Ga0306920_10145127513300032261SoilVPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDL
Ga0306920_10416423313300032261SoilMPRYFFTIHGRAQVEDDPAGTYLPDVAAALSYAEHTIRELRKKS
Ga0310914_1016036533300033289SoilMPQYFFTIHGREQVEDDPAGTYLPNVEAALSHAEYIIRELRKKSGYKDN
Ga0310914_1182481423300033289SoilMPRYFFTIHRQDRAENDPEGTYLQDAEAALFYADYTIRELRKKIVYEDDLSLMM


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