Basic Information | |
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Family ID | F095260 |
Family Type | Metagenome |
Number of Sequences | 105 |
Average Sequence Length | 51 residues |
Representative Sequence | VPQYFFTIHRGDRVEDDPDGTYLPDVAAALSYAEHTIRELRKKSGYNDLA |
Number of Associated Samples | 68 |
Number of Associated Scaffolds | 105 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 87.38 % |
% of genes near scaffold ends (potentially truncated) | 95.24 % |
% of genes from short scaffolds (< 2000 bps) | 83.81 % |
Associated GOLD sequencing projects | 59 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.44 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (75.238 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.191 % of family members) |
Environment Ontology (ENVO) | Unclassified (66.667 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (60.952 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 24.36% β-sheet: 2.56% Coil/Unstructured: 73.08% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.44 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Sediment Watersheds Vadose Zone Soil Tropical Forest Soil Soil Soil Forest Soil Soil Hardwood Forest Soil Tropical Peatland Tropical Forest Soil Forest Soil |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
Ga0066388_1001184341 | 3300005332 | Tropical Forest Soil | MPRYFFTIQGQDRVEDDPDGTYLPDAEAALCYAEYTIRELRRKSGYNDLA |
Ga0066388_1008060981 | 3300005332 | Tropical Forest Soil | MLRYFFTIHRHGRAENDPDGTYLPDAEAALSYADCTIRELRKQGVYDDDLSLMMI |
Ga0066388_1023684501 | 3300005332 | Tropical Forest Soil | LLAETGRSMRRYFFTVHGQDRVADDPEGTYLPDEAAALSYAEYTIRGLRKKSGYTYNNDPAL |
Ga0066388_1056249592 | 3300005332 | Tropical Forest Soil | MPRYFFTIHRGDRIKDDPDGTYLPDVAAALSYAEHTIRELRKKSGYNDLAL |
Ga0066388_1056575641 | 3300005332 | Tropical Forest Soil | VLRYFFTIHGRDRVEDDPDGIDLPDAAAALSHAEHTIRELRKKSGYTYNNDPALMMFV |
Ga0066903_1010409024 | 3300005764 | Tropical Forest Soil | MPRYFFTIHGRAQVEDDPAGTYLPDAAAALSYAEHTIRELRKKSGYTYNNDPA |
Ga0066903_1030886501 | 3300005764 | Tropical Forest Soil | MPQYFFTIHGQDRVADDPEGTYLPDVAAALSYAEYTIRGLRKKSGY |
Ga0066903_1065323691 | 3300005764 | Tropical Forest Soil | VPQYFFTIHRGDRVEDDPDGTYLPDVAAALSYAEHTIRELRKKSGYNDLA |
Ga0066903_1068797122 | 3300005764 | Tropical Forest Soil | MRRYFFTVHGQDRVADDPEGTYLPDEAAALSYAEYTIRGLRKKSGYTYNNDPALMMIVK |
Ga0066903_1086554201 | 3300005764 | Tropical Forest Soil | MPRYFFTIHGRAQVEDDPVGTYLPDRAAALSYAEYTIQELRKKSGYNDPGSHDDDKG* |
Ga0075026_1005419942 | 3300006057 | Watersheds | MPRYFFTIHRQDRVENGPDGAYLPDAEAALSYADYTIRGLRKKSGYE |
Ga0066653_105352551 | 3300006791 | Soil | VPRYFFTIHGRDRVEDDHDGTYLPDVAAALSYAEHTIRDLRKESGYKDDPALM |
Ga0066660_109577852 | 3300006800 | Soil | VAQYFFTIHGGDRVEDDPDGTYLPDVAAALSYAEHTIRELRKESGYKDDLALMMIVT |
Ga0126373_106492471 | 3300010048 | Tropical Forest Soil | MPRYFFTIYGRAKVDDDRAGTDLPDVAAALSYAEYTIRELRKKSGYKNDLALMM |
Ga0126373_106674461 | 3300010048 | Tropical Forest Soil | MPRYSFTIHGRDRVADDPDGTYLPDEAAALSYAEYTIRELRKKSGYKNDLALMMFVK |
Ga0126373_113311981 | 3300010048 | Tropical Forest Soil | MPRYFFTIHRQHRVENDHAGTYLPNVAAALSYAEDTIWELRKQNGYKDDLSLMMMVRD |
Ga0126376_124872801 | 3300010359 | Tropical Forest Soil | VPQYFFTIHRGNRVKDDPDGTYLPDLAAALSYAEHTIQELRKKSGYDDLT |
Ga0126378_109929981 | 3300010361 | Tropical Forest Soil | VDQVEHDPDGTYLRNVAEALSHAEYTIREQRKKSSYNDLALMMIVTDQSR |
Ga0126378_119632671 | 3300010361 | Tropical Forest Soil | VPQYFFAIHKGDRIKDDPDGTYLPDVMAALSYAEHTIRELRKKSGYDDLDLMMFVTDQS |
Ga0126381_1037463332 | 3300010376 | Tropical Forest Soil | MPRYFFSIHGRAEVDHDPADTYLPDVAAALSYAEHKIQELREKSDYNDPALMM |
Ga0126381_1045934483 | 3300010376 | Tropical Forest Soil | MPRYFFTIHGRAKIEDDPAGTYLPDVAAPLSYAEHTIRELCKKSG |
Ga0124850_10424644 | 3300010863 | Tropical Forest Soil | MPRYFFTIHREDRTQNDPDGTYLSDAEAALSYADYTIRELRKKSVYKDD |
Ga0137376_106212731 | 3300012208 | Vadose Zone Soil | VPQYFFTIHGRERVEDDRSGTYLPDVAAALSYAEHTIRVLRNESGYKDD |
Ga0126369_108309211 | 3300012971 | Tropical Forest Soil | MPGYFFTIHRQDRVENAADTYLPDVPAALSYAEDTIRGLRKQNGYKDN |
Ga0182036_107538872 | 3300016270 | Soil | VPRYFFTIHRRDRVEDDPDGTYLPDAETALCYADYTIRELRKKSAYKDDLTL |
Ga0182041_117880041 | 3300016294 | Soil | VPRYFFTIHRRDRVEDDPDGTHLPDVAAALSYGEYTIRELRKKSG |
Ga0182035_101863001 | 3300016341 | Soil | VPQYFFTIHRGNRVKDDADGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVMDQ |
Ga0182035_109731831 | 3300016341 | Soil | VPRYFFRIHREHRVEDDPDGTYLPDDTAALSYAEHTIRELRKKSGYTYNNDPA |
Ga0182035_115175052 | 3300016341 | Soil | MPRYFFTTHGRAKVEDDPAGTDLPDVAAALSYAEYTIRELR |
Ga0182035_120290641 | 3300016341 | Soil | MPRYSFTIHRQDRVENHLGDTYLPDVAAALSYAEDTIRELRKQNGYKDDLSL |
Ga0182032_107833411 | 3300016357 | Soil | VPRYFFTIHGRNRLEDDRDGTYLPDVAAALSYAEYTIRELRKKSG |
Ga0182032_108227371 | 3300016357 | Soil | MPRYSFTIHRQDRVENHPGDTYLPNVAAALSYAEDTIRELRKQNGYKDDLSLMMMVKD |
Ga0182032_116292492 | 3300016357 | Soil | MPQYFFTIHGRAKVDDDRAGTDLPDVAAALSYAEYTIRELRKK |
Ga0182032_116698022 | 3300016357 | Soil | VPQYFFTIHRGDRVEDDPDGTYLPDVAAALSYAEHTIRELRKK |
Ga0182034_109488061 | 3300016371 | Soil | VPQYFFTIHRGDRVEDDPDSTYLPDVTAALSYAEHTIQELRKKSGYNDLA |
Ga0182034_112001761 | 3300016371 | Soil | SLETGRSMPRYFFTIHGLDRVADDPEGTYLPDEAAALSYAEYTIRELRKKSGYNRPA |
Ga0182040_104013463 | 3300016387 | Soil | VPQYFFTIHRGNRVKDDADGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVMD |
Ga0182040_104928341 | 3300016387 | Soil | VPKYFFTIHRGNRVKDDLDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVMDQ |
Ga0182037_101035681 | 3300016404 | Soil | VPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMF |
Ga0182039_109329231 | 3300016422 | Soil | VPRYSFTIHGRDRVADDPDGTYLPDVAVALSYAEYTIRELRKKSGYKNDLALMM |
Ga0182039_119561112 | 3300016422 | Soil | MPRYFFTIHGRAQVEDDPAGTYLPDAAAALSYAEHTIRELRKKSGYNDLALMM |
Ga0182038_117399503 | 3300016445 | Soil | MPRYFFTIHGRAQVEDDPVGTYLPDRAAALSYAEYTIRELRKKSGYN |
Ga0187817_109531441 | 3300017955 | Freshwater Sediment | MSERLMPRYFFTIHGRAKIEDDRAGTYLPDVEAAFSYAEYTIRELRKKSGYNDPALMMII |
Ga0187817_109952571 | 3300017955 | Freshwater Sediment | MPRYFFTIHGREQDDPDGTYLPDVAAALSYAEYTIRELRKKSGYNDLALMMMVNDEA |
Ga0187822_101115021 | 3300017994 | Freshwater Sediment | MPRYFFTIHKQDRVEDDPGGTYLPDAEAALSYAEYTIRELRKKSGYKDDL |
Ga0187767_100640051 | 3300017999 | Tropical Peatland | MECSVYRYFFTIRGPDRVEDDPDGAYLPDAAAALTYAEYTIRELRKKDGWNDP |
Ga0187765_102202441 | 3300018060 | Tropical Peatland | MECSVHRYFFTIRGPDRVEDDPDGAYLPDAAAALTYAEYTIRELRKKDGWNDP |
Ga0126371_113962163 | 3300021560 | Tropical Forest Soil | VPQYFFTIHRGDRVEDDRDGTYLPDDTAALSYAEHTIWGLRKKSGY |
Ga0209325_10456432 | 3300027050 | Forest Soil | MPRYFFTIHRQDRVENGPDGAYLPDAEAALSYADYTIRGLRKKRAATRMICL |
Ga0170824_1124046352 | 3300031231 | Forest Soil | VAQYFFTIHGGDRVEDDPDGTYLPDVAAALSYAEHTIRELRKESGYKDDLALMMIVTDH |
Ga0318516_106253881 | 3300031543 | Soil | VPRYFFTIHRRDRVEDDPDGTHLPDVAAALSYGEYTIRELRKKSGYTYNNDP |
Ga0318528_106847181 | 3300031561 | Soil | MPQYFFTIHGREQVEDDPAGTCLPNVEAALSHAEYIIRELRKK |
Ga0310915_100632011 | 3300031573 | Soil | MPRYFFTTHGRAKVEDDPAGTDLPDVSAALSYAEYTIRELRNKS |
Ga0318574_102300702 | 3300031680 | Soil | MPQYFFTIHGREQVEDDPAGTYLPNVEAALSHAEYIIRELRKRAATGIIWL |
Ga0318560_100525034 | 3300031682 | Soil | MPRYFFTIQRQDRVENYPGDAYLPDVAAALSYADDTIQELRKQNGYKDDLSLMM |
Ga0307476_110675162 | 3300031715 | Hardwood Forest Soil | MPRYFFTIRRQDRFENGPDSAYLPDAEAALSYADYAIRGLRKKSGYEDDLSLMM |
Ga0318493_104474642 | 3300031723 | Soil | MPRYFFTIHRQDRVEDDRDGTYLPDADAALSYADYTIRELRKKSGYKDDL |
Ga0318501_106032831 | 3300031736 | Soil | MPRYFFTIHRQDRAQNDPDGTYLPDAEAALSYADHTIQELRKKNAYEGD |
Ga0306918_111326443 | 3300031744 | Soil | MPRYSFTIHRQDRVENHPGDTYLPNVAAALSYAEDTIRELRKQNGYKDD |
Ga0306918_115050711 | 3300031744 | Soil | MPRYFFTIHRQDRVENDHAGTYLPDVAAALSYAEYTIRELRKQNGYKDDLALMMMVKEA |
Ga0307477_107184001 | 3300031753 | Hardwood Forest Soil | MPRYFFTIDRQDRVENGPDGAYLPDTEAALSYADYTIRGLRKKSGYEDEVLSLPFFPGQ |
Ga0318509_100745841 | 3300031768 | Soil | VPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKS |
Ga0318521_110511311 | 3300031770 | Soil | VPQYFFTIHREDRVKDDLDGTYLPDVAAALSYAEHIIQELRKKSGYDDLALMMFVMD |
Ga0318546_101731503 | 3300031771 | Soil | VPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVTDQS |
Ga0318498_103695061 | 3300031778 | Soil | MPRYFFTIHGQDRVADDPEGTYLPDAAVALFYAEYTIRGLRKKSGYEDDLSLM |
Ga0318547_101416903 | 3300031781 | Soil | MPRYFFTIHGQDRVADDPESTYLPDEAAALSYTEYKIRELRKKSGYTDSGSDDVRR |
Ga0318567_101790073 | 3300031821 | Soil | MPRYFFTIHRQDRVEDDRDGTYLPDADAALSYADYTIRELRKKSGYK |
Ga0310917_101776561 | 3300031833 | Soil | MRRYFFTIHGQDRVADDPEGTYLPDEAAALSYAEYTIRVLRKKSDYEDDLSLMMMV |
Ga0310917_107254501 | 3300031833 | Soil | VPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVMDQ |
Ga0306919_101136731 | 3300031879 | Soil | VPQYFFTIHRGNRVKDDADGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVMDQC |
Ga0306925_101480621 | 3300031890 | Soil | VPRYFFTIHRRDRVEDDPDGTHLPDVAAALSYGEYTIRELRKKSGYKD |
Ga0306925_102064571 | 3300031890 | Soil | MPRYSFTIHRQDRVENHLGDTYLPDVAAALSYAEDTIRELRKQNGYKDDLSLMMMV |
Ga0306925_102962444 | 3300031890 | Soil | VPQYFFTIHRGNRVKDDADGTYLPDVAAALSYAEHTIQELRKKSGYDDL |
Ga0306925_120186421 | 3300031890 | Soil | VPQYFFTIHRGDRVEDDPDSTYLPDVTAALSYAEHTIQELRKKSGYNDLALMMIV |
Ga0318551_101115761 | 3300031896 | Soil | VPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMM |
Ga0306923_100153855 | 3300031910 | Soil | MPQYFFTIHGREQVEDDPAGTCLPNVEAALSHAEYI |
Ga0306923_110021161 | 3300031910 | Soil | VPRYFFTIHGRNRLEDDRDGTYLPDVAAALSYAEYTIRELRKKSGCNDLALMMFV |
Ga0306923_119575721 | 3300031910 | Soil | VPQYFFTIHRGDRVEDDPDGTYLPDVAAALSYAEHTIRELRKKSGYNDLALM |
Ga0306921_101701823 | 3300031912 | Soil | VPQYFFTIHRGDRVEDDPDSTYLPDVTAALSYAESTIRELQKKM |
Ga0306921_104276122 | 3300031912 | Soil | VPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVT |
Ga0306921_105019561 | 3300031912 | Soil | VPQYFFTIHRGDRVEDDPDGTYLPDVAAALSYAEHTIQELRKKSGYNDLALMMFVTDQST |
Ga0310912_101076645 | 3300031941 | Soil | MPRYFFTTHGRAKVEDDPAGTDLPDVAAALSYAEYTIRELRNKSDYTYNND |
Ga0310916_110522841 | 3300031942 | Soil | VPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVMDQC |
Ga0310913_107837072 | 3300031945 | Soil | VPQYFFTIHRGDRVEDDPDSTYLPDVTAALSYAEHTIQELRKKS |
Ga0310910_101051111 | 3300031946 | Soil | MPQYFFTIHGREQVEDDPAGTYLPNVEAALSHAEYIIR |
Ga0306926_102443675 | 3300031954 | Soil | MPRYFFTTHGRAKVEDDPAGTDLPDVAAALSYAEYTIRELRNKSD |
Ga0306922_118201871 | 3300032001 | Soil | MPRYFFTIHRRDRVENDPASTCLPDEAAALSYAEYTIRELRIQNGYKDDL |
Ga0310911_100415301 | 3300032035 | Soil | MPQYFFTIHGREQVEDDPAGTYLPNVEAALSHAEYI |
Ga0310911_100696893 | 3300032035 | Soil | VPQYFFTIHREDRVKDDLDGTYLPDVAAALSYAEHIIQELRKKSGYDDLALMMFVM |
Ga0318549_103348731 | 3300032041 | Soil | VPRYFFTIHRRDRVEDDPDGTHLPDVAAALSYGEYTIRELRKKSGYT |
Ga0318545_100198884 | 3300032042 | Soil | VPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMFVTD |
Ga0318545_102891421 | 3300032042 | Soil | MPRYFFTIHRQDRAENDPEGTYLQDAEAALSYADYTIRELRKKSVYE |
Ga0318558_106172191 | 3300032044 | Soil | MPQYFFTIHGREQVEDDPAGTCLPNVEAALSHAEYIIRELRKKSGYKD |
Ga0318532_101255012 | 3300032051 | Soil | MPRYFFTIHGRAKIEDDPAGTYLPDVAAALSYAEYTIRELLKKSGYTYNNDPA |
Ga0318533_106134312 | 3300032059 | Soil | VPRYFFTIHGRNRLEDDRDGTYLPDVAAALSYAEYTIRELRKKSGCNDLALMM |
Ga0318514_107195192 | 3300032066 | Soil | VPRYFFRIHREHRVEDDPDGTYLPDDTAAISYAEHTIRELRKKSGYDDLSL |
Ga0306924_111052044 | 3300032076 | Soil | MPRYFFTIQGRAQVEDDPVGTYLPDRAAALSYAEYTIRELRKKSGY |
Ga0318577_100678863 | 3300032091 | Soil | MPRYFFTIHRQDRVEDDRDGTYLRNAEAALSYADYTIRELRKKSGYKDDLSL |
Ga0307471_1037676211 | 3300032180 | Hardwood Forest Soil | MPRYFFTIDRQDRVENGPDGAYLPDTEAALSYADYTIRGLRKKSGYEDE |
Ga0306920_1002611071 | 3300032261 | Soil | VPKYFFTIHRGNRVKDDLDGTYLPDVAAALSYAEHTIQELRKKSGYDDLALMMF |
Ga0306920_1002877711 | 3300032261 | Soil | MRYFFTIHGQERVADDPEGTYLPDEAAALSYAEYTIRELRKKSVYNDLALMMFVKD |
Ga0306920_1014512751 | 3300032261 | Soil | VPQYFFTIHRGNRVKDDPDGTYLPDVAAALSYAEHTIQELRKKSGYDDL |
Ga0306920_1041642331 | 3300032261 | Soil | MPRYFFTIHGRAQVEDDPAGTYLPDVAAALSYAEHTIRELRKKS |
Ga0310914_101603653 | 3300033289 | Soil | MPQYFFTIHGREQVEDDPAGTYLPNVEAALSHAEYIIRELRKKSGYKDN |
Ga0310914_118248142 | 3300033289 | Soil | MPRYFFTIHRQDRAENDPEGTYLQDAEAALFYADYTIRELRKKIVYEDDLSLMM |
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