Metagenome / Metatranscriptome Family F095243

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095243
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	67 residues
Representative Sequence	QVSGAPGFKTGYWTWMTGGGETNGLSMIIFDSEENARAAGDRVSAIAADARDDVTLDGVEVREVVASA
Number of Associated Samples	96
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.90 %
% of genes near scaffold ends (potentially truncated)	94.29 %
% of genes from short scaffolds (< 2000 bps)	96.19 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.476 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.238 % of family members)
Environment Ontology (ENVO)	Unclassified (29.524 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.619 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.71% β-sheet: 21.87% Coil/Unstructured: 60.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13189	Cytidylate_kin2	4.76
PF01042	Ribonuc_L-PSP	4.76
PF12680	SnoaL_2	2.86
PF00027	cNMP_binding	1.90
PF07676	PD40	1.90
PF06253	MTTB	1.90
PF00857	Isochorismatase	1.90
PF07366	SnoaL	1.90
PF14588	YjgF_endoribonc	0.95
PF09948	DUF2182	0.95
PF13577	SnoaL_4	0.95
PF13669	Glyoxalase_4	0.95
PF06089	Asparaginase_II	0.95
PF02416	TatA_B_E	0.95
PF07690	MFS_1	0.95
PF07883	Cupin_2	0.95
PF08241	Methyltransf_11	0.95
PF00563	EAL	0.95
PF00589	Phage_integrase	0.95
PF01402	RHH_1	0.95
PF13586	DDE_Tnp_1_2	0.95
PF02163	Peptidase_M50	0.95
PF06441	EHN	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	4.76
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	1.90
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.90
COG5598	Trimethylamine:corrinoid methyltransferase	Coenzyme transport and metabolism [H]	1.90
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.95
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.95
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.95
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.95
COG4448	L-asparaginase II	Amino acid transport and metabolism [E]	0.95
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.95
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.48 %
Unclassified	root	N/A	49.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.48 %
Unclassified	root	N/A	49.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.48 %
Unclassified	root	N/A	49.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.52 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	38.10 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.52 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22.86 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.86 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.90 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.95 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.95 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.52 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	18.10 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.90 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	1.90 %
Actinobacteria bacterium 13_2_20CM_2_66_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	0.95 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.95 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.95 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.95 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.95 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.52 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	18.10 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.90 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1.90 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	0.95 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.95 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.95 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.95 %
Actinobacteria bacterium 13_2_20CM_2_66_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	0.95 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.52 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	18.10 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	1.90 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.90 %
Roseomonas aerilata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas aerilata	0.95 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.95 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	0.95 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.95 %
Actinobacteria bacterium 13_2_20CM_2_66_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	0.95 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.52 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	18.10 %
unclassified Myxococcaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae	1.90 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.90 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.95 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.95 %
Actinopolymorpha alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	0.95 %
Roseomonas aerilata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas aerilata	0.95 %
Actinobacteria bacterium 13_2_20CM_2_66_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	0.95 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.52 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	18.10 %
Myxococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1.90 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.90 %
Streptomyces sp. KY75	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. KY75	0.95 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.95 %
Actinopolymorpha alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	0.95 %
Roseomonas aerilata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas aerilata	0.95 %
Actinobacteria bacterium 13_2_20CM_2_66_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	0.95 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FIHLEPW02SO00T	Not Available	509	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig978471	Not Available	548	Open in IMG/M
2166559005\|cont_contig80031	All Organisms → cellular organisms → Bacteria → Terrabacteria group	679	Open in IMG/M
2170459014\|G1P06HT01DKIT9	Not Available	568	Open in IMG/M
3300000045\|ARCol0oldRDRAFT_c03959	Not Available	537	Open in IMG/M
3300000890\|JGI11643J12802_12170369	Not Available	573	Open in IMG/M
3300000953\|JGI11615J12901_10570626	Not Available	511	Open in IMG/M
3300000956\|JGI10216J12902_100272820	Not Available	707	Open in IMG/M
3300001139\|JGI10220J13317_10556076	Not Available	523	Open in IMG/M
3300004156\|Ga0062589_101658731	Not Available	636	Open in IMG/M
3300004157\|Ga0062590_102152741	Not Available	583	Open in IMG/M
3300005277\|Ga0065716_1018931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas aerilata	521	Open in IMG/M
3300005332\|Ga0066388_100203423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2602	Open in IMG/M
3300005332\|Ga0066388_101306567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1251	Open in IMG/M
3300005332\|Ga0066388_108164854	Not Available	523	Open in IMG/M
3300005334\|Ga0068869_100258681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1393	Open in IMG/M
3300005338\|Ga0068868_101078970	Not Available	738	Open in IMG/M
3300005364\|Ga0070673_101122337	Not Available	735	Open in IMG/M
3300005365\|Ga0070688_101123165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	629	Open in IMG/M
3300005434\|Ga0070709_11575051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300005444\|Ga0070694_100274381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	1283	Open in IMG/M
3300005445\|Ga0070708_101704962	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300005456\|Ga0070678_100678045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	927	Open in IMG/M
3300005518\|Ga0070699_100606366	Not Available	998	Open in IMG/M
3300005618\|Ga0068864_102398363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300005764\|Ga0066903_106815031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300005834\|Ga0068851_10922614	Not Available	548	Open in IMG/M
3300006046\|Ga0066652_100986276	Not Available	800	Open in IMG/M
3300006794\|Ga0066658_10196430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	1064	Open in IMG/M
3300006806\|Ga0079220_11489843	Not Available	580	Open in IMG/M
3300006854\|Ga0075425_101023155	Not Available	942	Open in IMG/M
3300006914\|Ga0075436_101535882	Not Available	506	Open in IMG/M
3300009088\|Ga0099830_10351007	Not Available	1186	Open in IMG/M
3300009147\|Ga0114129_10369007	Not Available	1898	Open in IMG/M
3300009156\|Ga0111538_13461306	Not Available	548	Open in IMG/M
3300009162\|Ga0075423_10594311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1166	Open in IMG/M
3300009162\|Ga0075423_13023239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300010154\|Ga0127503_10681953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	916	Open in IMG/M
3300010336\|Ga0134071_10811129	Not Available	501	Open in IMG/M
3300010360\|Ga0126372_11936500	Not Available	635	Open in IMG/M
3300010398\|Ga0126383_12187762	Not Available	639	Open in IMG/M
3300010401\|Ga0134121_10887342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	865	Open in IMG/M
3300010401\|Ga0134121_10923394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	850	Open in IMG/M
3300011107\|Ga0151490_1418204	Not Available	1037	Open in IMG/M
3300011269\|Ga0137392_10775917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	792	Open in IMG/M
3300012207\|Ga0137381_10793011	Not Available	821	Open in IMG/M
3300012350\|Ga0137372_10096912	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	2481	Open in IMG/M
3300012355\|Ga0137369_10446245	Not Available	924	Open in IMG/M
3300012363\|Ga0137390_11838813	Not Available	536	Open in IMG/M
3300012912\|Ga0157306_10006828	All Organisms → cellular organisms → Bacteria	2118	Open in IMG/M
3300012958\|Ga0164299_10047881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1980	Open in IMG/M
3300012986\|Ga0164304_10844490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	711	Open in IMG/M
3300013105\|Ga0157369_12464293	Not Available	527	Open in IMG/M
3300014157\|Ga0134078_10387941	Not Available	624	Open in IMG/M
3300014968\|Ga0157379_12465106	Not Available	520	Open in IMG/M
3300015077\|Ga0173483_10285115	Not Available	802	Open in IMG/M
3300015261\|Ga0182006_1195405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300015356\|Ga0134073_10101469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	851	Open in IMG/M
3300015356\|Ga0134073_10281185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300015372\|Ga0132256_100304370	Not Available	1679	Open in IMG/M
3300015372\|Ga0132256_102485147	Not Available	620	Open in IMG/M
3300016404\|Ga0182037_10751369	Not Available	838	Open in IMG/M
3300018061\|Ga0184619_10128868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1148	Open in IMG/M
3300019269\|Ga0184644_1510543	All Organisms → cellular organisms → Bacteria → Terrabacteria group	831	Open in IMG/M
3300019867\|Ga0193704_1042021	All Organisms → cellular organisms → Bacteria → Terrabacteria group	908	Open in IMG/M
3300021445\|Ga0182009_10150027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. KY75	1106	Open in IMG/M
3300022694\|Ga0222623_10408284	All Organisms → cellular organisms → Bacteria → Terrabacteria group	516	Open in IMG/M
3300022883\|Ga0247786_1031763	Not Available	1030	Open in IMG/M
3300023058\|Ga0193714_1013183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1247	Open in IMG/M
3300023066\|Ga0247793_1063156	Not Available	609	Open in IMG/M
3300025906\|Ga0207699_10769327	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300025910\|Ga0207684_10526205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1012	Open in IMG/M
3300025921\|Ga0207652_11572143	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300025927\|Ga0207687_10201148	Not Available	1557	Open in IMG/M
3300025929\|Ga0207664_10556369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1029	Open in IMG/M
3300025929\|Ga0207664_11012788	Not Available	744	Open in IMG/M
3300025981\|Ga0207640_10853613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	792	Open in IMG/M
3300026118\|Ga0207675_101321643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	741	Open in IMG/M
3300026324\|Ga0209470_1342238	Not Available	538	Open in IMG/M
3300026547\|Ga0209156_10040129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2565	Open in IMG/M
3300027765\|Ga0209073_10299724	Not Available	637	Open in IMG/M
3300028592\|Ga0247822_10119452	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300028708\|Ga0307295_10208338	All Organisms → cellular organisms → Bacteria → Terrabacteria group	555	Open in IMG/M
3300028722\|Ga0307319_10029378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1700	Open in IMG/M
3300028722\|Ga0307319_10167360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300028754\|Ga0307297_10372031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300028755\|Ga0307316_10244548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300028793\|Ga0307299_10279124	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	627	Open in IMG/M
3300028807\|Ga0307305_10050360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1918	Open in IMG/M
3300028814\|Ga0307302_10190804	Not Available	999	Open in IMG/M
3300028872\|Ga0307314_10147726	Not Available	677	Open in IMG/M
3300028885\|Ga0307304_10526184	Not Available	543	Open in IMG/M
3300031562\|Ga0310886_10190445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1112	Open in IMG/M
3300031720\|Ga0307469_11307736	Not Available	689	Open in IMG/M
3300031771\|Ga0318546_10289673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1132	Open in IMG/M
3300031794\|Ga0318503_10212567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300031798\|Ga0318523_10595834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300031799\|Ga0318565_10626206	Not Available	517	Open in IMG/M
3300031832\|Ga0318499_10231761	Not Available	718	Open in IMG/M
3300031910\|Ga0306923_12340092	Not Available	531	Open in IMG/M
3300031943\|Ga0310885_10227182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	935	Open in IMG/M
3300031954\|Ga0306926_12232331	Not Available	608	Open in IMG/M
3300031954\|Ga0306926_12816265	Not Available	525	Open in IMG/M
3300032000\|Ga0310903_10627792	Not Available	574	Open in IMG/M
3300032008\|Ga0318562_10568006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	656	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.14%
Host-Associated	Host-Associated	20.95%
Engineered	Engineered	1.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.33%
Plants	Host-Associated → Plants	20.95%
Aquatic	Environmental → Aquatic	3.81%
Solid Waste	Engineered → Solid Waste	0.95%
Modeled	Engineered → Modeled	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.57%
Freshwater	Environmental → Aquatic → Freshwater	1.90%
Sediment	Environmental → Aquatic → Sediment	1.90%
Grass	Engineered → Solid Waste → Grass	0.95%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.00%
Loam	Environmental → Terrestrial → Soil → Loam	13.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.95%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.95%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.95%
Composting	Engineered → Solid Waste → Grass → Composting	0.95%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.57%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.71%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.95%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.95%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.95%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.90%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.95%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.95%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.95%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.95%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.95%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.95%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.95%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300000045	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis Col-0 old rhizosphere	Host-Associated	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005277	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015261	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_05373390	2070309004	Green-Waste Compost	GYWTWPTGEGELNVLAMIIFDAEENARAAADRVSVNFSQLENRDDVTLDGVEVREVVASA
KansclcFeb2_06678420	2124908045	Soil	MPTALGKCSISQVVPQVSGAPGFRTGYWTWMTGGGETNGLSMIIFDSEENARAAGDRVSAIAADARDDVTLDGVEVREVVASA
cont_0031.00005560	2166559005	Simulated	SGAPGFKAGYWTWPTGEGELNVLAMIIFDSEENARAAGDSGGRNFSQLESRDDITLDGVEVREVVASA
2PV_02096870	2170459014	Switchgrass, Maize And Mischanthus Litter	QVVPQVSGAPGFKTGYWTWMTDGGETNGLSMVIFDSEENARAAGDRVSAIAADAPDDVTLDGVEVREVVASA
ARCol0oldRDRAFT_039591	3300000045	Arabidopsis Rhizosphere	VVPGISGAPGFKTGYWTWSSGGELNGLSMIIFDSEENARAAGDRISAIAANAPDDVTLDGVEVREVVASA*
JGI11643J12802_121703691	3300000890	Soil	SQVVPQVSGAPGFKTGYWTWSTGGGELNGLSMIIFDSEENARRAGDRISAIAADAPDDVTLDGVEVREVVASA*
JGI11615J12901_105706261	3300000953	Soil	SSSPGFKTGHWTWSEDKSNGLTMIIFDSEENARAAGDRIKSIAADMRDDVTLDGTEVREVVASA*
JGI10216J12902_1002728202	3300000956	Soil	GYWTWSTGGGELNGLSLIIFDSEENARAAGDRVSAIAAEASDDVTLDGVEVREVVASA*
JGI10220J13317_105560762	3300001139	Soil	HWTWSEDQSNGLTMIIFDSEENARAAGERIKSIAADMRDDVTLDGTEVREVVASA*
Ga0062589_1016587311	3300004156	Soil	KTGYWTWMTGGGETNGLSMVIFDSEENARAAGDRVSAIAADARDDVTLDGVEVREVVASA
Ga0062590_1021527411	3300004157	Soil	GHWTWSEDQSNGLTMIIFDSQENARAAGERIKSIAADMRDDVTLDGTEVREVVASA*
Ga0065716_10189311	3300005277	Arabidopsis Rhizosphere	DGQVVPGISGAPGFKTGYWTWSSGGELNGLSMIIFDSEENARAAGDRISAIAANAPDDVTLDGVEVREVVASA*
Ga0066388_1002034231	3300005332	Tropical Forest Soil	GFKAGYWTWPIGEGELNVLAMLIFDSEENARAASDRVSANFSELESRGDVTLDGVEVREVVASA*
Ga0066388_1013065673	3300005332	Tropical Forest Soil	PGFEAGYWTWSTGGGDLDGLSLIVFDSEENARAAGERISAIANAATDDVTLEGVEVREVVASA*
Ga0066388_1081648541	3300005332	Tropical Forest Soil	QVSGAPGFKTGYWTWSDGGELNGLSMIIFDSEENARAAGDRISAVAAAASDDGTLDSVEVREVVASA*
Ga0068869_1002586814	3300005334	Miscanthus Rhizosphere	GAPGFKAGYWTWSTGGGELNGLSMIIFDTEENARAAGDRIRAIAAAAPDDVTLDGVEVREVVASA*
Ga0068868_1010789702	3300005338	Miscanthus Rhizosphere	SGAPGFKTGYWTWSTGGELNGLSLIMFDSEENARAAGDRVSAIAAAAPDDVTLDGVEVREVVASA*
Ga0070673_1011223371	3300005364	Switchgrass Rhizosphere	QVSGAPGFKTGYWTWSTGGGNLDGLSLVVFDSEENARAAGERVSAIAADAPSDVTLESVEVREVVASA*
Ga0070688_1011231652	3300005365	Switchgrass Rhizosphere	GFKTGYWTWSTGGELNGLSLIMFDSEENARAAGDRVSAIAADARDDVTLDGVEVREVVASA*
Ga0070709_115750511	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	QVSGAPGFKTGYWTWMTGGGETNGLSMVIFDSEENARAAGDRVSAIAAAARDDVTLDGVEVREVVASA*
Ga0070694_1002743811	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	FKTGYWTWMTGGGETNGLSMVIFDSEENARAAGDRVSAIAAAARDDVTLDGVEVREVVASA*
Ga0070708_1017049621	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VVPQVSGAPGFKTGYWTWSTGGGELNGLSMIIFDSEEDARAAGDRVSAIAADASDDVTLDGVEVREVVASA*
Ga0070678_1006780452	3300005456	Miscanthus Rhizosphere	SQVVPQVSGAPGFKTGYWTWPTGGGELNGLSMIIFDSEESARGAGDRVSAIAADAPDDVTLDGVEVREVVASA*
Ga0070699_1006063663	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	GYWTWPTGGAASNGLSMIIFDSEENARAAGDRVSAVAADAGDDVTLDSVEVREVVASA*
Ga0068864_1023983631	3300005618	Switchgrass Rhizosphere	PQVSGAPGFKAGYWTWGTGDGETNGLSMIIFDSEESARGAGDRVSAIAADAPDDVTLDGVEVREVVASA*
Ga0066903_1068150311	3300005764	Tropical Forest Soil	SGAPGFKAGYWTWPTGGGELNVLAMIIFDSEENARAARDRVSANFSQLESRDDVTLEGVEVREVVASA*
Ga0068851_109226141	3300005834	Corn Rhizosphere	VSGAPGFKTGYWTWSTGSGELNGLSMIIFDSEENARRAGDRISAIAANAPDDVTLDGVEVREVVASA*
Ga0066652_1009862763	3300006046	Soil	AGYWTWSTGGGGTDGLSMIVFDSEENARAAGDRVSAIAAEAPDDVTLDGVEVREVVASA*
Ga0066658_101964303	3300006794	Soil	VPQVSGAPGFKTGYWTWTTGGVETNGLSMIIFESEENARAAGDRISAIAADARDDVTLDGVEVREVVASA*
Ga0079220_114898431	3300006806	Agricultural Soil	SQVVPQVSGAPGFKTGYWTWGSGGGDLNGLSMIIFDSEENARAAGDRVSAIAAEAPDDVTLDGVEVREVVASA*
Ga0075425_1010231553	3300006854	Populus Rhizosphere	NSQVVPQLSAAAGFKAGYWTWSTGDGQLNGLAMIIFDSEDNARSAGDVLREIGANAPAGSVTVEGVEVRDVVASA*
Ga0075436_1015358822	3300006914	Populus Rhizosphere	QVVPQVSGAPGSKTGYWTWSTGGGELNGLSMIIFDSEENARAAGDRISAIATDAPDDVTLDGVEVREVVASA*
Ga0099830_103510071	3300009088	Vadose Zone Soil	GYWTWSTGGGELNGLSMIVFDSEENARAAGDRVSAIAADARDDVTLDGVEVREVVASA*
Ga0114129_103690073	3300009147	Populus Rhizosphere	MRTALGRYSTAKVVPQVSGAPGSKTGYWTWSTGGGELNGLSMIIFDSEENARAAGDRISAIATDAPDDVTLDGVEVREVVASA*
Ga0111538_134613062	3300009156	Populus Rhizosphere	QASGAPGFKAGYWTWPTGEGELNVLAMIIFDSEENARAAGDRVSANFSQLENRDDITLDGVEVREVVASA*
Ga0075423_105943113	3300009162	Populus Rhizosphere	KAGYWTWPTGEGELNVLAMIIVDSEENARAAGDRVNANFSQLENRDDVTLDGVEVREVVASA*
Ga0075423_130232391	3300009162	Populus Rhizosphere	QVVPQVSGAPGFKAGYWTWATGGGETNGLSMIVFDSEENARAAGDRISAIAADAPGDVTLDGVEVREVVASA*
Ga0127503_106819531	3300010154	Soil	GFKTGYWTWATDGGETNGLSMIIFDSEESARAAGDRVSAIAADAPADVTLDRVEVREVVASA*
Ga0134071_108111291	3300010336	Grasslands Soil	LCPQVSGAPGFKTGYWTWPTGGGELNGLSMIIFDSEENARAAGDRVSAIAADARDDVTLESVEVREVVASA*
Ga0126372_119365002	3300010360	Tropical Forest Soil	MPGTTTRYWTWPTGEGELNALSMIIFDSEENAGGAGDRVSANFSQLENRDDVTLDGVEVRVVVASA*
Ga0126383_121877621	3300010398	Tropical Forest Soil	GFKAGYWTWPTGEGELNVLAMIIFDSEENARAAGDRASANFSQLENRDDVTLDGVEVREVVASA*
Ga0134121_108873421	3300010401	Terrestrial Soil	NNQVVPQVSGAPGFKTGYWTWTTGGGETNGLSMVIFDSEENARAAGDRVSAIAADARDDVTLDGVEVREVVASA*
Ga0134121_109233941	3300010401	Terrestrial Soil	SQVVPQVSGAPGFKAGYWTWGTGDGETNGLSMIIFDSEESARGAGDRVSAIAADAPDDVTLDGVEVREVVASA*
Ga0151490_14182041	3300011107	Soil	GAPGFEAGYWTWASGGGETNGLSMIIFDSEANARAAGDRIGAIAADAPDDVTLDGVEVREVVASA*
Ga0137392_107759173	3300011269	Vadose Zone Soil	VVPQVSGAPGFKTGYWTWPTGGAASNGLSMIIFDSEENARAAGDRVSAVAADAGDDVTLDSVEVREVVASA*
Ga0137381_107930112	3300012207	Vadose Zone Soil	VPQVSGAPGFKTGYWTWPTGGGELNGLSMIVFDSEENARAAGDRVSAIAADARDDVTLDSVEVREVVASA*
Ga0137372_100969124	3300012350	Vadose Zone Soil	FKTGYWTWTTGGGETNGLSMVIFDSEENARAAGDRVSAIAADARDDVTLDGVEVREVVASA*
Ga0137369_104462452	3300012355	Vadose Zone Soil	GFKTGYWTWPTGGAASNGLSMIIFDSEENARAAGDRVSAVAADAGDDVTLDSVEVREVVASA*
Ga0137390_118388131	3300012363	Vadose Zone Soil	NSQVVPQVSGAPGFKTGYWTWSTGGGELNGLSMIVFDSEENARAAGDRVSAIAADARDDVTLDGVEVREVVASA*
Ga0157306_100068281	3300012912	Soil	FKTGYWTWSSGGELNGLSMIIFDSEENARAAGDRISAIAANAPDDVTLDGVEVREVVASA
Ga0164299_100478815	3300012958	Soil	GVSGAPGFEAGYWTWSTGGGGLNGLSMIMFDSEENARAAGDRISAIAADAPDDVTLDVVEVREVVASA*
Ga0164304_108444902	3300012986	Soil	VSGAPGFKAGYWTWATGGGETNGLSMIVFDSEENARAAGDRIRAIAADAPDDVTLDGVEVREVVASA*
Ga0157369_124642932	3300013105	Corn Rhizosphere	GYWTWSTGGGELNGLSMIIFDSEENARRAGDRIGAIAADAPDDVTLDGVEVREVVASA*
Ga0134078_103879412	3300014157	Grasslands Soil	SGAPGFKTGYWTWSTGGGESNGLSMIIFDSEENSRAAGERVSAIAAGAPDDVTLDGVEVREVVASA*
Ga0157379_124651061	3300014968	Switchgrass Rhizosphere	VSGAPGFKTGYWTWSTGSGAMNGLSMVIFDSEENARAAGDRISAIAANAPDNVTLDGVEVREVVASA*
Ga0173483_102851151	3300015077	Soil	SSPGFKSGHWTWSEDQSNGLTMIIFDSEENARAAGDRIESIAADMRDDVTLDGTEVREVVASA*
Ga0182006_11954052	3300015261	Rhizosphere	GAPGFQAGYWTWSTGDGGELNGLAMMIFDSAENAGAAGDRVRAAAESSDDVTLDGVEVREVVASA*
Ga0134073_101014691	3300015356	Grasslands Soil	GFKTGYWTWTTGGVETNGLSMIIFDSEENARAAGERVSAIAAGAPDDVTLDGVEVREVVASA*
Ga0134073_102811852	3300015356	Grasslands Soil	FKTGYWTWTTGGVETNGLSMIIFESEENARAAGDRISAIAADARDDVTLDGVEVREVVASA*
Ga0132256_1003043702	3300015372	Arabidopsis Rhizosphere	VVPQVSGAPGFKTGYWTWSTGGELNGLSLIMFDSEENARAAGDRVSAIAAAAPDDVTLDGVEVREVVASA*
Ga0132256_1024851471	3300015372	Arabidopsis Rhizosphere	SSAPGFKTGYWTWPTGGGELNGLSMIIFDSEENARGAGDRIRAIAASAPDDVTLDDVEIREVVASA*
Ga0182037_107513694	3300016404	Soil	GFKTGYWTWATGGGELNGLSMIIFDSEENARAAGDRVSAIAAGARDDVTLDSVEVREVVASA
Ga0184619_101288683	3300018061	Groundwater Sediment	KTGYWTWMTGGGETNGLSMIIFDSEENARAAGDRVSAIAAAARDDVTLDGVEVREVVASA
Ga0184644_15105432	3300019269	Groundwater Sediment	GFKTGYWTWATGGGETDGLSMIIFDSEENARAAGDRISAIAAAARDDVTLDGVEVREVVASA
Ga0193704_10420211	3300019867	Soil	LNSQVVPQVSGAPGFKTGYWTWPTGGGELNGLSMIIFDSEENARAAGDRVTAVATGAGDDVTLDGVEVREVVASA
Ga0182009_101500273	3300021445	Soil	LLSSQVVPQVSGAPGFKTGYWTWPTGGGELNGLSMIIFDSEENARAAGDRVSAVAAGAGDDVTLDGVEVREVVASA
Ga0222623_104082841	3300022694	Groundwater Sediment	VSGAPGFKTGYWTWPTGGGELNGLSMIIFDSEENARAAGDRVTAVATGAGDDVTLDGVEVREVVASA
Ga0247786_10317633	3300022883	Soil	APGFKTGYWTWSTGGGELNGLSMIIFDSEENARRAGDRISAIAADAPDDVTLDGVEVREVVASA
Ga0193714_10131831	3300023058	Soil	QVSGAPGFKTGYWTWTTGGAETNGLSMIIFDSEENARAAGDRISAIATDAPDDVTLDGIEVREVVASA
Ga0247793_10631562	3300023066	Soil	TGYWTWSSGGELNGLSMIIFDSEENARAAGDRISAIAANAPDDVTLDGVEVREVVASA
Ga0207699_107693271	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	SQVVPGVSGAPGFQAGYWTWSDDGGNGLAMMVFDSAEHARSAGDRVRAAAESSDNVTLDEVEVREVVASA
Ga0207684_105262053	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	YWTWPTGGGELNGLSMIIFDSAENARAAGDRVSAVAAGAGDDVTLDGVEVREVVASA
Ga0207652_115721431	3300025921	Corn Rhizosphere	SAAPGFKTGYWTWPTGGGELNGLSMAIFDSEENARAVGDRVSAIAADAGADVTVDSVEVREVVASA
Ga0207687_102011481	3300025927	Miscanthus Rhizosphere	FKSGHWTWSEDQSNGLTMIIFDSQENARAAGERIKSIAADMRDDVTLDGTEVREVVASA
Ga0207664_105563691	3300025929	Agricultural Soil	LNSQVVPQVSGAPGFKAGYWTWGTGGGETNGLSMIIFDSEENARGAGDRVSAIAADAPGDVTLDGVEVREVVASA
Ga0207664_110127881	3300025929	Agricultural Soil	SQVVPGVAGAPGFQAGYWTWSDDGGNGLAMMVFDSAENARSAGDRVRAAAESSDNVTLDEVEVREVVASA
Ga0207640_108536131	3300025981	Corn Rhizosphere	PGFKTGYWTWSSGGELNGLSMIIFDSEENARAAGDRISAIAANAPDDVTLDGVEVREVVASA
Ga0207675_1013216432	3300026118	Switchgrass Rhizosphere	VVPGISGAPGFKTGYWTWSSGGELNGLSMIIFDSEENARAAGDRISAIAANAPDDVTLDGVEVREVVASA
Ga0209470_13422382	3300026324	Soil	GAPGFKTGYWTWQGGGGELNGLAMMIFDSEENARAAGDRISAIAADARDDVTLDGVEVREVVASA
Ga0209156_100401294	3300026547	Soil	NSQVVPQVSGAPGFKTGYWTWPTGGGELNGLSMIIFDSEENARAAGDRVSAIAADAPDDVTLDGVEVREVVASA
Ga0209073_102997243	3300027765	Agricultural Soil	PQVSGAPGFKTGYWTWGSGGGDLNGLSMIIFDSEENARAAGERVKAIAADAPDDVTLDGTEVREVVASA
Ga0247822_101194524	3300028592	Soil	GISGAPGFKTGYWTWSSGGELNGLSMIIFDSEENARAAGDRISAIAANAPDDVTLDGVEVREVVASA
Ga0307295_102083382	3300028708	Soil	GFKTGYWTWPTGGGELNGLSMIIFDSEENARAAGDRVTAVATGAGDDVTLDGVEVREVVASA
Ga0307319_100293783	3300028722	Soil	SQVVPQVSGAPGFKTGYWTWPTGGGELNGLSMIIFDSEENARAAGDRVTAVATGAGDDVTLDGVEVREVVASA
Ga0307319_101673601	3300028722	Soil	GFKTGYWTWTTGGGETNGLSMIIFDSEENARAAGDRISAIAADARDDVTLDGVEVREVVASA
Ga0307297_103720312	3300028754	Soil	NSQVVPQVSGAPGFKTGYWTWTIGGGETNGLSMIIFDSEENARAAGDRVSAIAADARDDVTLDGVEVREVVASA
Ga0307316_102445481	3300028755	Soil	QVSGAPGFKTGYWTWMTGGGETNGLSMIIFDSEENARAAGDRVSAIAADARDDVTLDGVEVREVVASA
Ga0307299_102791241	3300028793	Soil	VPQVSGAPGFKTGYWTWTTGGAETNGLSMIIFDSEENARAAGDRISAIAADARDDVTLDGVDVREVVASA
Ga0307305_100503601	3300028807	Soil	LNSQVVPQVSGAPGFKTGYWTWMTGGGETNGLSMIIFDSEENARAAGDRISAIAADAHDDVTLDGVEVREVVASA
Ga0307302_101908041	3300028814	Soil	GAPGFKTGYWTWTTGGGKTDGLSMIVFDSEQNARAAGDRISAIAADAPDDVTLDGVEVREVVASA
Ga0307314_101477261	3300028872	Soil	VPQVSGAPGFKTGYWTWMTGGGETNGLSMIIFDSEENARAAGDRISAIATDAPDDVTLDGIEVREVVASA
Ga0307304_105261841	3300028885	Soil	FKAGYWTWSTGGAELNGLSMIVFDSEENARAAGDRISAIASNAPDDVTLDGVEVREVVAS
Ga0310886_101904453	3300031562	Soil	APGFKTGYWTWTTGGGETNGLSMVIFDSEENARAAGDRVSAIAADARDDVTLDGVEVREVVASA
Ga0307469_113077362	3300031720	Hardwood Forest Soil	SQVVPGVSGAPGFKTGYWTWATGAGETNGLSMAIFDSEENARAAGDRISAIAADARDDVTLEGVEVREVVASA
Ga0318546_102896732	3300031771	Soil	PQVSSSPGFKTGYWTWANGGELNGLSMIIYDSEENARAAGDRIRAIAAGAADDVTLDGVEVREVVASA
Ga0318503_102125671	3300031794	Soil	ETGYWTWSTGAGELNGLSMIIFNTEENARAAGERVKAIAADAGRDDVTLDSTEDREVVAS
Ga0318523_105958342	3300031798	Soil	TGYWTWSTGAGELNGLSMIIFNTEENARAAGERVKAIAADAGRDDVTLDSTEDREVVASA
Ga0318565_106262061	3300031799	Soil	VLNGQVVPQVSSSPGFKTGYWTWANGGELNGLSMIIYDSEENARAAGDRIRAIAAGAADDVTLDGVEVREVVASA
Ga0318499_102317611	3300031832	Soil	GYWTWSSGGAELNGLAMMIFDSEENARAAGDRISAIAASAPDDVTLDGVEVREVVASA
Ga0306923_123400921	3300031910	Soil	NSEVVPQTSSAPGFKAGYWTWPTGGGELNGLSMIIFDSEENARAAGDRISAIAASAPDDVTLDGVEVREVVASA
Ga0310885_102271821	3300031943	Soil	VSGAPGFKTGYWTWTTGGGETNGLSMVIFDSEENARAAGDRVSAIAADARDDVTLDGVEVREVVASA
Ga0306926_122323311	3300031954	Soil	SEVVPQTSSAPGFKAGYWTWPTGGGELNGLSMIIFDSEENARAAGDRISAIAASAPDDVTLDGVEVREVVASA
Ga0306926_128162652	3300031954	Soil	QVSGAPGFETGYWTWSTGGGELTGLSMIIFNTEENARAAGKRVRAIAADAGRDDVTLDSTEDREVVASA
Ga0310903_106277921	3300032000	Soil	QVVPGISGAPGFKTGYWTWSSGGELNGLSMIIFDSEENARAAGDRISAIAANAPDDVTLDGVEVREVVASA
Ga0318562_105680064	3300032008	Soil	VLQTSSAPGFKAGYWTWPTGGEELNGLSMIIFDSEENARAAGDRVSAIAAGARDDVTLDSVEVREVVASA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095243

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences