Metagenome Family F095199

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095199
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	51 residues
Representative Sequence	EWPLARALMGSLRVSGVLSGSVFDAADAPSGVERRATRRFGVAVGLRYQL
Number of Associated Samples	89
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.05 %
% of genes from short scaffolds (< 2000 bps)	91.43 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (99.048 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (29.524 % of family members)
Environment Ontology (ENVO)	Unclassified (58.095 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.714 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70. 1JGI25384J37096_101737942 2JGI25388J43891_10590051 3JGI25390J43892_100833992 4JGI25386J43895_101277591 5Ga0066672_102534753 6Ga0066677_102024453 7Ga0066680_103018941 8Ga0066673_105589642 9Ga0066679_100394564 10Ga0066679_102213911 11Ga0066679_106476361 12Ga0066688_102511021 13Ga0066684_100118621 14Ga0066675_112372072 15Ga0070694_1010416722 16Ga0070708_1005467891 17Ga0066686_104341741 18Ga0066682_103496082 19Ga0066681_101372371 20Ga0066681_105368101 21Ga0070707_1004902391 22Ga0070697_10001042112 23Ga0066697_101225022 24Ga0066697_101823462 25Ga0070696_1018261681 26Ga0070704_1002858244 27Ga0066707_103827043 28Ga0066703_101795443 29Ga0066708_101207601 30Ga0066691_107253182 31Ga0066654_100559162 32Ga0066654_109251312 33Ga0066651_101275423 34Ga0066651_104309802 35Ga0066659_103476161 36Ga0079221_105025771 37Ga0079220_106007362 38Ga0099793_102069643 39Ga0099793_103152013 40Ga0099793_103522103 41Ga0099794_100771291 42Ga0099828_109243383 43Ga0066709_1026239051 44Ga0099792_111859401 45Ga0134088_101330523 46Ga0134088_103231422 47Ga0134088_105437141 48Ga0134086_101281713 49Ga0134065_100277231 50Ga0134111_101659003 51Ga0134063_101782952 52Ga0134063_102362431 53Ga0134071_100885681 54Ga0134071_107494771 55Ga0134066_104246851 56Ga0134127_126032482 57Ga0137391_113555032 58Ga0137393_112609822 59Ga0137364_106888582 60Ga0137362_113030951 61Ga0137380_102152471 62Ga0137377_113666311 63Ga0137372_101708121 64Ga0137386_112982452 65Ga0137371_101267733 66Ga0137398_108266151 67Ga0137395_107710061 68Ga0137419_119745482 69Ga0137416_116094732 70Ga0137416_119016922 71Ga0134110_100061789 72Ga0134076_102744532 73Ga0134081_100372164 74Ga0134075_104496561 75Ga0137411_10012883 76Ga0134069_10294921 77Ga0134112_102991611 78Ga0134074_10975863 79Ga0066655_105894641 80Ga0066655_111307411 81Ga0066667_112159341 82Ga0066662_120222942 83Ga0207684_102855481 84Ga0207646_100858991 85Ga0209238_10189386 86Ga0209469_10968132 87Ga0209469_11515631 88Ga0209239_11564652 89Ga0209761_12743111 90Ga0209801_10037001 91Ga0209267_10329794 92Ga0209057_100090025 93Ga0209159_10530023 94Ga0209059_11055703 95Ga0209378_11167481 96Ga0209076_10402844 97Ga0209073_100863311 98Ga0209073_104245382 99Ga0209074_100848382 100Ga0209180_103129701 101Ga0209590_107481801 102Ga0307469_113143541 103Ga0307477_110694131 104Ga0307471_1014557671 105Ga0307472_1015221822
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70. 1JGI25384J37096_101737942 2JGI25390J43892_100833992 3JGI25386J43895_101277591 4Ga0066672_102534753 5Ga0066673_105589642 6Ga0066679_100394564 7Ga0066675_112372072 8Ga0070708_1005467891 9Ga0066703_101795443 10Ga0066708_101207601 11Ga0066651_101275423 12Ga0079221_105025771 13Ga0079220_106007362 14Ga0137377_113666311 15Ga0134069_10294921 16Ga0209159_10530023 17Ga0209073_100863311 18Ga0209074_100848382 19Ga0307471_1014557671 20Ga0307472_1015221822
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50 1Ga0099793_103522103 2JGI25390J43892_100833992 3JGI25386J43895_101277591 4Ga0066672_102534753 5Ga0066680_103018941 6Ga0066684_100118621 7Ga0066675_112372072 8Ga0066708_101207601 9Ga0079221_105025771 10Ga0079220_106007362 11Ga0134071_100885681 12Ga0134071_107494771 13Ga0137386_112982452 14Ga0137371_101267733 15Ga0137416_116094732 16Ga0134075_104496561 17Ga0134112_102991611 18Ga0209469_11515631 19Ga0209073_100863311 20Ga0209180_103129701 21Ga0307469_113143541 22Ga0307471_1014557671 23Ga0307472_1015221822
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.46% β-sheet: 0.00% Coil/Unstructured: 61.54%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00072	Response_reg	40.00
PF00213	OSCP	24.76
PF00430	ATP-synt_B	6.67
PF00119	ATP-synt_A	2.86
PF07731	Cu-oxidase_2	1.90
PF01436	NHL	1.90
PF13229	Beta_helix	1.90
PF08669	GCV_T_C	0.95
PF12867	DinB_2	0.95
PF08450	SGL	0.95

Showing 1 to 10 of 12 entries

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COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0712	FoF1-type ATP synthase, delta subunit	Energy production and conversion [C]	24.76
COG0711	FoF1-type ATP synthase, membrane subunit b or b'	Energy production and conversion [C]	6.67
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	2.86
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	1.90
COG0636	FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K	Energy production and conversion [C]	0.95
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.95
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.95

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.05 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.05 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.05 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	81.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	81.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	5.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %
Unclassified	root	N/A	0.95 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	29.52 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	5.71 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	29.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3.81 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	29.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %
Unclassified	root	N/A	0.95 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	1.90 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1.90 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	29.52 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	2.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1.90 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	29.52 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %
Unclassified	root	N/A	0.95 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002561\|JGI25384J37096_10173794	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	655	Open in IMG/M
3300002909\|JGI25388J43891_1059005	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	576	Open in IMG/M
3300002911\|JGI25390J43892_10083399	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	720	Open in IMG/M
3300002912\|JGI25386J43895_10127759	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	629	Open in IMG/M
3300005167\|Ga0066672_10253475	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1133	Open in IMG/M
3300005171\|Ga0066677_10202445	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1111	Open in IMG/M
3300005174\|Ga0066680_10301894	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300005175\|Ga0066673_10558964	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	669	Open in IMG/M
3300005176\|Ga0066679_10039456	All Organisms → cellular organisms → Bacteria	2659	Open in IMG/M
3300005176\|Ga0066679_10221391	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1212	Open in IMG/M

Showing 1 to 10 of 105 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	9.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.48%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	40.95%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.95%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	17.14%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.43%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	29.52%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.95%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.86%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M

Showing 1 to 10 of 89 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25384J37096_101737942	3300002561	Grasslands Soil	ARALKGSFRVSGVVSESVFDAADAPSGVERRTTRRFGVALGLRYQP*
JGI25388J43891_10590051	3300002909	Grasslands Soil	ARDLTGSLRVSGVSSESVFDAADTPSGVERRATRRFGVAVGLRYQL*
JGI25390J43892_100833992	3300002911	Grasslands Soil	RSLIGSLRAGGVSSRSMVDPADVPTGVERRPTRRFGVAVGLRYRL*
JGI25386J43895_101277591	3300002912	Grasslands Soil	SRTRAAARTTAALEWPLARALMGSLRVSAVSSGSVFDAADTPAGVERRATRRFGVAVGLRYRM*
Ga0066672_102534753	3300005167	Soil	TAAALEWPLAGSLTGSLRVSGALSGSIFNADEPPPEVERRATRRFGVAVGLRYRL*
Ga0066677_102024453	3300005171	Soil	AAALEWPLAGSLTGSLRVSGVLSRSIFNADEPPPEVERRATRRFGVAVGVRYRP*
Ga0066680_103018941	3300005174	Soil	SRTRLGGRAATVVEWPLARDLTGSLRVSGVSSESVFDAADTPSGVERRATRRFGVAVGLRYQL*
Ga0066673_105589642	3300005175	Soil	WPLARDLTGSLRVSGVSSASVFDAADTPTGVERRATRRFGVALGLRYKL*
Ga0066679_100394564	3300005176	Soil	RNRVGGRATAVVEWPLARALMGSLRVSGVWSGSVLDPGDAPSGVERRATRRFGVALGLRYQL*
Ga0066679_102213911	3300005176	Soil	RVAAQTAAALEWPLAGSLTGSLRVSGVLSGSIFNADEPPPEVERRATRRFGVAVGVRYRL
Ga0066679_106476361	3300005176	Soil	LAGSLTGSLRVSGVLSGSIFNADEPPPEVERRATRRLGVAIGARYRL*
Ga0066688_102511021	3300005178	Soil	AAALEWPLAGSLTGSLRVSGALSGSIFNADEPPPEVERRATRRFGVAVGLRYRL*
Ga0066684_100118621	3300005179	Soil	GRTRLAGRTAAALEWPLARALTGSLRVSGVLSSSVFNAGETPAGVERRATRRLGVAVGLRYRS*
Ga0066675_112372072	3300005187	Soil	WNFDGERRNRVGGRAAAALEWPLARTLTGSLRVSGTLSGSAFDEADTPGGVERRATRRVGVAVGLRYRL*
Ga0070694_1010416722	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	PLARALSGAVRVSGVLSPSVFDAADTPSGVERRATRRLGVALGLRYQL*
Ga0070708_1005467891	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	ALMGSLRASGVWSGSVFDPGDTPSGVERRATRRFGVSLGLRYRL*
Ga0066686_104341741	3300005446	Soil	LRVSGVWSGSVFDPGDTPSGVERRATRRFGVALGLRYRL*
Ga0066682_103496082	3300005450	Soil	LTGSLRVSGVLSRSVFDAADTPSGVERRATRRFGVAVGLRYRL*
Ga0066681_101372371	3300005451	Soil	EWPLARALMGSLRVSGVWSGSVFDPGDTPSGVERRATRRLGVALGLRYQL*
Ga0066681_105368101	3300005451	Soil	EWPLARALMGSLRVSGVWSGSVFDPGDTPSGVERRATRRFGVALGLRYQL*
Ga0070707_1004902391	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LMGSLRVSGVVSESVFDAADAPSGVERRATRRFGVAVGLRYQL*
Ga0070697_10001042112	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	NFDGERRNRVGGRAAAVVEWPLASALTGSLRVNGVLSRSVFDAADTPSGVERRATRRFGVAVGLRYQL*
Ga0066697_101225022	3300005540	Soil	AVAEWPLAHALTGSLRVSGMLSGSVFDAADTPSGVERRATRRVGVAVGLRYRL*
Ga0066697_101823462	3300005540	Soil	AVAEWPLAHALTGSLRVSGMLSGSVFDAADTPSGVERRATRRFGVAVGLRYRL*
Ga0070696_1018261681	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	RALMGSLRVSGVVSESVFDAADAPSGVERRATRRFGVAVGLRYQL*
Ga0070704_1002858244	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VGSLRVSGVWSGSVFDPGDTPSGVERRATRRFGVALGVRYRL*
Ga0066707_103827043	3300005556	Soil	GGRATAVVEWPLARALMGSLRVSGVWSGSVFDPGDTPSGVERRATRRFGVALGLRYQL*
Ga0066703_101795443	3300005568	Soil	GVWSGSVLDPGDAPSGVERRATRRFGVALGLRYQL*
Ga0066708_101207601	3300005576	Soil	PLTGAFTGSLRVSGILSGSVFDAGDTPAGVERRATRRVGVAVGLRYRL*
Ga0066691_107253182	3300005586	Soil	RVAAQTAAALEWPLAGSLTGSLRVSGVLSGSIFNADEPPPEVERRATRRLGVAIGARYRL
Ga0066654_100559162	3300005587	Soil	AHALTGSLRVSGMLSGSVFDAADTPSGVERRATRRVGVAVGLRYRL*
Ga0066654_109251312	3300005587	Soil	LAGSLTGSLRVSGALSGSIFNADEPPPEVERRATRRFGVAVGLRYRL*
Ga0066651_101275423	3300006031	Soil	GVLSGSIFNADEPPPEVERRATRRLGVAIGARYRL*
Ga0066651_104309802	3300006031	Soil	QTAAALEWPLAGSLTGSLRVSGALSGSIFNADEPPPEVERRATRRFGVAVGLRYRL*
Ga0066659_103476161	3300006797	Soil	TAAALEWPLAGSLTGSLRVSGVLSGSIFNADEPPPEVERRATRRLGVAIGVRYRL*
Ga0079221_105025771	3300006804	Agricultural Soil	AVEWPIARALTGSLRVSGVLTGSVFDATEVPDGVERVATRRVAVVIGLRYRL*
Ga0079220_106007362	3300006806	Agricultural Soil	AATLEWPLARALTGSLRVGGVLSGSIFDAGETPAGVERRATRRFGVAMGLRYQP*
Ga0099793_102069643	3300007258	Vadose Zone Soil	ERRNRVGGRAAAVVEWPLARALTGSLRVSGVMSGSVFDAADTPSGVERRATRRFGVAVGLRYQL*
Ga0099793_103152013	3300007258	Vadose Zone Soil	GGRAAAIVEWPLARAFTGSLRVSGVVSESVFDPADAPSGVERRATRRLGVALGLRYQP*
Ga0099793_103522103	3300007258	Vadose Zone Soil	EWPLARALMGSLRVSGVLSGSVFDAADAPSGVERRATRRFGVAVGLRYQL*
Ga0099794_100771291	3300007265	Vadose Zone Soil	SGVVSESVFDAADAPSGVERRATRRLGVALGLRYQL*
Ga0099828_109243383	3300009089	Vadose Zone Soil	WPLARALMGSLRVSGVLSGSVFDAPDTPSGVERRATRRFGVAVGVRYQL*
Ga0066709_1026239051	3300009137	Grasslands Soil	GSLTGSLRVSGVLSGSIFNADEPPPEVERRATRRLGVAIGARYRL*
Ga0099792_111859401	3300009143	Vadose Zone Soil	RVSGVVSESVFDAADAPSGVERRATRRFGVALGLRYQP*
Ga0134088_101330523	3300010304	Grasslands Soil	EWPLARALMGSLRVTGVWSGSVLDPGDTPSGVERRATRRFGVALGLRYQL*
Ga0134088_103231422	3300010304	Grasslands Soil	VEWPLARALMGSLRVTGVWSGSVFDPGDTPSGVERRATRRFGVALGLRYRL*
Ga0134088_105437141	3300010304	Grasslands Soil	AVVEWPLARALMGSFRVTGVWSGSVFDPGDTPSGVERRATRRFGVALGLRYQL*
Ga0134086_101281713	3300010323	Grasslands Soil	ARALMGSLRVSGVWSGSVFDPGDTPSGVERRATRRFGVALGLRYQL*
Ga0134065_100277231	3300010326	Grasslands Soil	ATAVVEWPLARALMGSLRVSGVWSGSVFDPGDTPSGVERRATRRLGVALGLRYQL*
Ga0134111_101659003	3300010329	Grasslands Soil	AVVEWPLARALMGSLRVTGVWSGSVFDPGDTPSGVERRATRRFGVALGLRYRL*
Ga0134063_101782952	3300010335	Grasslands Soil	RALMGSLRVSGVWSDSVFDPGDTPSGVERRATRRLGVALGLRYQL*
Ga0134063_102362431	3300010335	Grasslands Soil	TAVVEWPLARALMGSLRVSGVWSGSVLDPGDAPSGVERRATRRFGVALGLRYQL*
Ga0134071_100885681	3300010336	Grasslands Soil	RNRVGGRATAVVEWPLARALMGSLRVTGVWSGSVFDPGDTPSGVERRATRRFGVALGLRYRL*
Ga0134071_107494771	3300010336	Grasslands Soil	AEWPLARALAGSLQVSGMLSGSVFDAADTPSGVERRATRRFGVAVGLRYRL*
Ga0134066_104246851	3300010364	Grasslands Soil	MGSLRVTGVWSGSVFDPGDTPSGVERRATRRFGVALGLRYQL*
Ga0134127_126032482	3300010399	Terrestrial Soil	WPLARALMGSLRVSGVVSESVFDAADAPSGVERRATRRFGVAVGLRYRL*
Ga0137391_113555032	3300011270	Vadose Zone Soil	LTGSLRVSGVWSGSVFDPGDTPSGVERRATRRFGVALGLRYQL*
Ga0137393_112609822	3300011271	Vadose Zone Soil	WPLARAFTGSLRVSGVVSESVFDPADAPSGVERHTTRRFGVALGLRYQQ*
Ga0137364_106888582	3300012198	Vadose Zone Soil	RVTGVWSGSVFDPGDTPSGVERRATRRFGVALGLRYQL*
Ga0137362_113030951	3300012205	Vadose Zone Soil	TGSLRVSGVSSGSVFDAADTPSGVERRATRRFGVAVGLRYQL*
Ga0137380_102152471	3300012206	Vadose Zone Soil	TVAALEWPLARSLTGSLRVSGVLSGSIFNADEPPPEVERRATRRFGVALGLRYRL*
Ga0137377_113666311	3300012211	Vadose Zone Soil	LWTVDGASRTRVAAQTAAALEWPLAGSLTGSLRVSGVLSGSIFNADEPPPEVERRATRRLGVAIGARYRL*
Ga0137372_101708121	3300012350	Vadose Zone Soil	QTVAALEWPLARSLTGSLRVSGVLSGSIFNADEPPPEVERRPTRRFGVAVGVRYRL*
Ga0137386_112982452	3300012351	Vadose Zone Soil	GRAAAAVEWPIARALTGSLRVSGVLTGSVFDPAEVPAGVERLATRRVAVAIGLRYGL*
Ga0137371_101267733	3300012356	Vadose Zone Soil	SLRVTGVWSGSVLDPGDTPSGVERHATRRLGVALVLRYQL*
Ga0137398_108266151	3300012683	Vadose Zone Soil	QRNRVGGRAAAVLEWPLAPAFMGSLRVSGVLSGSVFDAADAPSGVERRATRRFGVAVGLRYQL*
Ga0137395_107710061	3300012917	Vadose Zone Soil	MGSLRVSGVLSGSVFDAADAPGGVERRATRRFGVAVGLRYQL*
Ga0137419_119745482	3300012925	Vadose Zone Soil	GVVSESVFDAADAPSGVERRATRRFGVALALRYQP*
Ga0137416_116094732	3300012927	Vadose Zone Soil	GRAAAIVEWPLARAFTGSLRVSGVVSESVFDPADAPSGVERRATRRLGVALGLRYQP*
Ga0137416_119016922	3300012927	Vadose Zone Soil	AAAIVEWPLARAFRGSLRVSGVVSESVFDAADAPSGVERRATRRFGVALGLRYQP*
Ga0134110_100061789	3300012975	Grasslands Soil	LTGSLRVSGVLSGSIFNADEPPPEVERRATRRLGVAIGVRYRL*
Ga0134076_102744532	3300012976	Grasslands Soil	ATAVVEWPLARALMGSFRVTGVWSGSVFDPGDTPSGVERRATRRFGVALGLRYRL*
Ga0134081_100372164	3300014150	Grasslands Soil	LRVSGALSGSIFNADEPPPEVERRATRRFGVAIGVRYRL*
Ga0134075_104496561	3300014154	Grasslands Soil	AAAVMEWPLTGALTGSLRVSGVLSRSVFDAADTPSGVERRATRRFGVAVGLRYRL*
Ga0137411_10012883	3300015052	Vadose Zone Soil	VEWPLARALMGSLRVNGVVSESVFDAADAPSGVERRATRRFGVAVGLRYRL*
Ga0134069_10294921	3300017654	Grasslands Soil	DSRRRVATGRALMGSFRVTSVWSGSVFDPGDTPSGVERRATRRFGVALGFRYQL
Ga0134112_102991611	3300017656	Grasslands Soil	AVAEWPLAHALTGSLRVSGMLSGSVFDAGDTPSGVERRATRRVGVAVGLRYRL
Ga0134074_10975863	3300017657	Grasslands Soil	LMGSFRVTGVWSGSVFDPGDTPSGVERRATRRFGVALGLRHQL
Ga0066655_105894641	3300018431	Grasslands Soil	PLAGSLSGSLRVSGALSGSIFNADEPPPEVERRATRRFGVAIGVRYRL
Ga0066655_111307411	3300018431	Grasslands Soil	PLAGSLSGSLRVSGALSGSIFNADEPPPEVERRATRRFGVAVGLRYRL
Ga0066667_112159341	3300018433	Grasslands Soil	SLTGSLRVSGVLSGSIFNADEPPPEVERRATRRLGVAIGARYRL
Ga0066662_120222942	3300018468	Grasslands Soil	EWPLAGSLTGSLRVSGVLSGSIFNADEPPPEVERRATRRFGVAVGVRYRP
Ga0207684_102855481	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	GVVSESVFDAADAPSGVERRATRRFGVAVGLRYQL
Ga0207646_100858991	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LMGSLRVSGVVSESVFDAADAPSGVERRATRRFGVAVGLRYQL
Ga0209238_10189386	3300026301	Grasslands Soil	RRTRLAGRTAAALEWPLARALTGSLRVSGVLSGSVFNPGETPAGVERRATRRLGVAIGLRYRL
Ga0209469_10968132	3300026307	Soil	RALMGSFRVTGVWSGSVFDPGDTPSGVERRATRRFGVALGLRHQL
Ga0209469_11515631	3300026307	Soil	RVSGVWSGSVLDPGDAPSGVERRATRRFGVALGLRYQL
Ga0209239_11564652	3300026310	Grasslands Soil	WTVDGDSRTRVAAQTAAALEWPLAGSLTGSLRVSGVLSGSIFNADEPPPEVERRATRRLGVAVGLRYRL
Ga0209761_12743111	3300026313	Grasslands Soil	GSLRAGGVSSRSMVDPADVPTGVERVATRRFDVAVGLRYQL
Ga0209801_10037001	3300026326	Soil	GGRATAVVEWPLARALMGSLRVSGVWSGSVFDPGDTPSGVERRATRRFGVALGLRYQL
Ga0209267_10329794	3300026331	Soil	TRLGGRAATVVEWPLARDLTGSLRVSGVSSASVFDAADTPTGVERRATRRFGVALGLRYK
Ga0209057_100090025	3300026342	Soil	WTVDGDSRTRVAAQTAAALEWPLAGSLTGSLRVSGALSGSIFNADEPPPEVERRATRRFGVAVGLRYRL
Ga0209159_10530023	3300026343	Soil	DGESRTRLGGRAATVVEWPLARDLTGSLRVSGVSSESVFDAADTPSGVERRATRRFGVAVGLRYQL
Ga0209059_11055703	3300026527	Soil	NRVGGRATAVVEWPLARALMGSLRVSGVWSGSVLDPGDAPSGVERRATRRFGVALGLRYQ
Ga0209378_11167481	3300026528	Soil	GSLRVSGVWSGSVFDPGDTPSGVERRATRRFGVALGLRYQR
Ga0209076_10402844	3300027643	Vadose Zone Soil	LARALMGSLRVSGVLSGSVFDAADAPGGVERRATRRFGVAVGLRYQL
Ga0209073_100863311	3300027765	Agricultural Soil	RSRVGGRVAGAVEWPIARTLTGSLRVSGVMTGSVFDGEEVPPGVELLATRRLAVAIGLRYGL
Ga0209073_104245382	3300027765	Agricultural Soil	LARALTGSLRVGGVLSGSIFDAGETPAGVERRATRRFGVAMGLRYQP
Ga0209074_100848382	3300027787	Agricultural Soil	DMWKVEGDTRTRVGGRAAAAVEWPIARALTGSLRVSGVLTGSVFDAAEVPDGVERVATRRVAVAIGLRYGL
Ga0209180_103129701	3300027846	Vadose Zone Soil	PLARAIKGSLRVSGVVSESVFDAADAPSGVERRTTRRFGVALGLRYQP
Ga0209590_107481801	3300027882	Vadose Zone Soil	ATGVVEWPLARALTGSLRVSGVWSGSVFDPGDTPSGVERRATRRLGVALGLRYQL
Ga0307469_113143541	3300031720	Hardwood Forest Soil	AAALEWPLARALSGSLRVSGLVSGSVFDAGETPAGVERRATRRLGVAVGLRSRL
Ga0307477_110694131	3300031753	Hardwood Forest Soil	AAAALEWPLARALSGSLRVSGLVSGSVFDAGETPPDVERRATRRFGVAVGLRYGL
Ga0307471_1014557671	3300032180	Hardwood Forest Soil	RVAARAAAALEWPLARALSGSLRVSGLVSGSVFDAGETPPDVERRATRRFGVAVGGRYRL
Ga0307472_1015221822	3300032205	Hardwood Forest Soil	AAVVEWPLARALSGAVRVSGVLSPSVFDAADTPSGVERRATRRLGVALGLRYQL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters