Metagenome / Metatranscriptome Family F094983

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F094983
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	64 residues
Representative Sequence	MVTQEFWEPADLVLVSSPPGFCVQGSVVYCKKLPSDDYIVGIRLDAPVEHWTEALGLRES
Number of Associated Samples	68
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	25.00 %
% of genes near scaffold ends (potentially truncated)	81.90 %
% of genes from short scaffolds (< 2000 bps)	79.05 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.095 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (66.667 % of family members)
Environment Ontology (ENVO)	Unclassified (58.095 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.476 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94 1JGI25385J37094_100272691 2JGI25383J37093_101561202 3JGI25382J43887_103330811 4JGI25615J43890_11006741 5Ga0066672_100474713 6Ga0066673_108147351 7Ga0066685_100155871 8Ga0066678_109196132 9Ga0070708_1005366391 10Ga0070707_1002774683 11Ga0070699_1014176201 12Ga0066692_104979663 13Ga0066651_100963754 14Ga0099791_103728651 15Ga0099791_103900382 16Ga0099793_101760431 17Ga0099793_104435901 18Ga0099793_106609611 19Ga0099794_101794881 20Ga0099794_102765951 21Ga0066710_1000794645 22Ga0099829_110276851 23Ga0099830_100739494 24Ga0099830_106114572 25Ga0099830_106481152 26Ga0099828_112562791 27Ga0066709_1000979892 28Ga0127477_1604602 29Ga0137392_102156311 30Ga0137391_101617451 31Ga0137391_104670854 32Ga0137393_102240911 33Ga0137399_102298242 34Ga0137399_106290491 35Ga0137362_102279031 36Ga0137362_107030561 37Ga0137362_107754731 38Ga0137362_109303181 39Ga0137362_112099421 40Ga0137377_103324834 41Ga0137377_108620013 42Ga0137386_103704051 43Ga0137360_101134751 44Ga0137360_105053731 45Ga0137360_115170682 46Ga0137361_100252891 47Ga0137361_108842171 48Ga0137361_115673891 49Ga0134052_12099571 50Ga0137358_100159531 51Ga0137358_102942411 52Ga0137358_107055481 53Ga0137398_105152522 54Ga0137394_101966241 55Ga0137394_102094824 56Ga0137394_114341821 57Ga0137359_100038347 58Ga0137359_102098415 59Ga0137359_109003691 60Ga0137359_109346852 61Ga0137419_100261986 62Ga0137419_119472461 63Ga0137416_106022471 64Ga0137404_106206152 65Ga0137404_106809392 66Ga0137404_110416701 67Ga0137404_115813241 68Ga0137407_114261641 69Ga0137410_111716571 70Ga0137410_112338821 71Ga0137420_12220103 72Ga0137418_105517263 73Ga0137418_109115151 74Ga0179594_102326703 75Ga0179592_104650522 76Ga0210400_109912441 77Ga0210396_1000076322 78Ga0210402_118186771 79Ga0137417_13659885 80Ga0207646_102354153 81Ga0209802_11271801 82Ga0209158_10610393 83Ga0209690_10197873 84Ga0209160_10473874 85Ga0179593_10188974 86Ga0179587_107835561 87Ga0209076_10082342 88Ga0209076_11616551 89Ga0209180_104670191 90Ga0209180_105530531 91Ga0209180_106027992 92Ga0209180_107264691 93Ga0209701_106173711 94Ga0209488_110994141 95Ga0137415_108233551 96Ga0222749_107277022 97Ga0307468_1007026842 98Ga0307475_100094021 99Ga0307475_102722241 100Ga0307475_107252352 101Ga0316044_1273321 102Ga0307473_100298131 103Ga0307479_100190418 104Ga0307479_101820972 105Ga0307471_1027536121
Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94 1JGI25385J37094_100272691 2JGI25383J37093_101561202 3JGI25382J43887_103330811 4JGI25615J43890_11006741 5Ga0066672_100474713 6Ga0066685_100155871 7Ga0066678_109196132 8Ga0070708_1005366391 9Ga0070707_1002774683 10Ga0066692_104979663 11Ga0099791_103728651 12Ga0099793_101760431 13Ga0099829_110276851 14Ga0099830_106481152 15Ga0137392_102156311 16Ga0137391_101617451 17Ga0137391_104670854 18Ga0137362_112099421 19Ga0137386_103704051 20Ga0137361_108842171 21Ga0137358_102942411 22Ga0137394_101966241 23Ga0137404_106206152 24Ga0137407_114261641 25Ga0137410_111716571 26Ga0179594_102326703 27Ga0210396_1000076322 28Ga0210402_118186771 29Ga0307475_107252352 30Ga0316044_1273321 31Ga0307473_100298131 32Ga0307479_100190418 33Ga0307479_101820972 34Ga0307471_1027536121
Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60 1Ga0137419_100261986 2JGI25385J37094_100272691 3JGI25383J37093_101561202 4JGI25382J43887_103330811 5JGI25615J43890_11006741 6Ga0066685_100155871 7Ga0070708_1005366391 8Ga0070707_1002774683 9Ga0099791_103900382 10Ga0066710_1000794645 11Ga0099830_100739494 12Ga0099830_106481152 13Ga0137392_102156311 14Ga0137391_101617451 15Ga0137362_102279031 16Ga0137362_109303181 17Ga0137362_112099421 18Ga0137377_103324834 19Ga0137386_103704051 20Ga0137360_105053731 21Ga0134052_12099571 22Ga0137358_100159531 23Ga0137358_102942411 24Ga0137358_107055481 25Ga0137398_105152522 26Ga0137394_101966241 27Ga0137394_114341821 28Ga0137404_106206152 29Ga0137404_106809392 30Ga0137404_110416701 31Ga0137407_114261641 32Ga0137410_111716571 33Ga0137418_105517263 34Ga0179594_102326703 35Ga0210396_1000076322 36Ga0210402_118186771 37Ga0209802_11271801 38Ga0209076_10082342 39Ga0209180_105530531 40Ga0209180_107264691 41Ga0307475_100094021 42Ga0307475_107252352 43Ga0316044_1273321 44Ga0307473_100298131 45Ga0307479_100190418 46Ga0307471_1027536121
Powered by MSAViewer

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.23% β-sheet: 31.82% Coil/Unstructured: 57.95%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
WebGL does not seem to be available. This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser. For a list of supported browsers, refer to http://caniuse.com/#feat=webgl. Load File(s)

Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF07238	PilZ	29.52
PF13030	DUF3891	2.86
PF01103	Omp85	1.90
PF03743	TrbI	1.90
PF01555	N6_N4_Mtase	1.90
PF01734	Patatin	1.90
PF13031	DUF3892	1.90
PF00375	SDF	0.95
PF00578	AhpC-TSA	0.95
PF03793	PASTA	0.95

Showing 1 to 10 of 18 entries

Previous1 2Next

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	1.90
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	1.90
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	1.90
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	1.90
COG2948	Type IV secretory pathway, VirB10 component	Intracellular trafficking, secretion, and vesicular transport [U]	1.90
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	1.90
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	1.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	79.05 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.90 %
Unclassified	root	N/A	1.90 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	27.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.62 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.90 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.62 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.90 %
Unclassified	root	N/A	1.90 %

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10027269	All Organisms → cellular organisms → Bacteria → Acidobacteria	2025	Open in IMG/M
3300002560\|JGI25383J37093_10156120	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300002908\|JGI25382J43887_10333081	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300002910\|JGI25615J43890_1100674	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300005167\|Ga0066672_10047471	All Organisms → cellular organisms → Bacteria → Acidobacteria	2446	Open in IMG/M
3300005175\|Ga0066673_10814735	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300005180\|Ga0066685_10015587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4423	Open in IMG/M
3300005181\|Ga0066678_10919613	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005445\|Ga0070708_100536639	All Organisms → cellular organisms → Bacteria → Acidobacteria	1104	Open in IMG/M
3300005468\|Ga0070707_100277468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1629	Open in IMG/M

Showing 1 to 10 of 104 entries

Previous1 2 3 4 5…11Next

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	4.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.24%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.29%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	69.52%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.95%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	66.67%

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 68 entries

Previous1 2 3 4 5 6 7Next

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100272691	3300002558	Grasslands Soil	NVSRFGVQVVTQEFWKPAERVLVSSPPGFCAQGSVVYCKKLPSDDYSVGIRLDAAVEHWMEGSDSESPDEP*
JGI25383J37093_101561202	3300002560	Grasslands Soil	LVSSPLGFCVQGSVVYCMKLPSNDYLLGIWLDAPVEHWTKALRFGES*
JGI25382J43887_103330811	3300002908	Grasslands Soil	EPAEKVLVSSPPGFCLQGSVVYCRKLPSDDYLLGIRLNAPVEDWIEALGLMAS*
JGI25615J43890_11006741	3300002910	Grasslands Soil	KMVTQKLWESAELVLVSSPPGFLVQGSVVYCKKLPSDDYIVGIRLDAPVKHWIEALGLGEA*
Ga0066672_100474713	3300005167	Soil	MKIVTQEFWEPAEMVLLSSPPGFCVQGSVVYCKKLPSDDFVLGISLDVPIENWAETLAFGES*
Ga0066673_108147351	3300005175	Soil	WEPAEMVLLSSPPGFCVQGSVVYCKKLPSDDFVLGISLDVPIENWAETLAFGES*
Ga0066685_100155871	3300005180	Soil	VVPTENVSRFGIQMVTQKFWEPTELVLVSSPPEFCAQGSVVYCKKLPSDDYIVGIRLEAPVEHWNEALGLGSPDKP*
Ga0066678_109196132	3300005181	Soil	KFWEPDEMVLVSSPPGFFVQGSVVYCKKLPSDNHLLGIRLDAPVDHWSETLGPAAS*
Ga0070708_1005366391	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	NVSRFGIQMVTQEFWEPAELVLVSSPPGFCVQGSVAYCNKLPSDDYILGIRLDAPVEHWIEALGFRGS*
Ga0070707_1002774683	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	ENISRAGIQMLTQKFWEPDELVLVSSPPGFFVQGSVVYCRKLPSDDHLLGIRLDAPVEPWSETLAPAAS*
Ga0070699_1014176201	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	RFGIQMVTQEFWEPAELVLVSSPPGFCVQGSVAYCNKLPSDDYILGIRLDAPVEHWIEALGFRGS*
Ga0066692_104979663	3300005555	Soil	VPTENISRTGIRLVTREFWEPAEPVLVSSPPGFCVQGSVVYCRKLPSDDYVLGLLLDAPVEDWTEACGGFRGSWRALT*
Ga0066651_100963754	3300006031	Soil	TQKFWEPTELVLVSSPPEFCAQGSVVYCKKLPSDDYIVGIRLEAPVEHWNEALGLGSPDKP*
Ga0099791_103728651	3300007255	Vadose Zone Soil	MVAQEFWEPADLVLVSSPPGFCIQGSVVYCKKLPSEDYILGIRLDAPVEKWM
Ga0099791_103900382	3300007255	Vadose Zone Soil	PTENISRVGIQMVTQKFWEPDELVLVSSPPGFFVQGSVVYCKKLPSDDHLLGIRFDAPIEHWSETLGPGVS*
Ga0099793_101760431	3300007258	Vadose Zone Soil	PADLVLVSSPPGFCVQGSVVYCKNLPSEDYILGIRLDAPVEEWMEQLGLGESSQTLA*
Ga0099793_104435901	3300007258	Vadose Zone Soil	MVTQEFWEPADLVLVSSPPGFCVQGSVVYCKKLPSEDYILGIRLDAPVEEWMEQLGLGE
Ga0099793_106609611	3300007258	Vadose Zone Soil	MVTQKFWEPAELVLVSSPPGFCVQGSVVYCKKLPSDDYIVGIRLDAPVEHWTEALGSRES
Ga0099794_101794881	3300007265	Vadose Zone Soil	MKMVTQEFWKPDELVLVSSPPGFCAQGSVVYCKKLPSDDYILGIRLDASVEHWMEALRLG
Ga0099794_102765951	3300007265	Vadose Zone Soil	MVTQEFWEPAELVLVSSPPGFCVQGSVVYCKKLPSDDYILGIRLDASVEHWMEALRLG
Ga0066710_1000794645	3300009012	Grasslands Soil	EVVPVENVSRSGMKIVTQEFWEPAEMVLLSSPPGFCVQGSVVYCKKLPSDDFVLGISLDVPIENWAETLAFGES
Ga0099829_110276851	3300009038	Vadose Zone Soil	MQMVTQTFWEPAERVLVSSPPGFWLEGSVVYCKKLPSEDYLLGIWLDAPVEHWTEALGCEES*
Ga0099830_100739494	3300009088	Vadose Zone Soil	MQMVTQTFREPAERVLVSSPPGFWLEGSVVYCKKLPSEDYLLGIWLDAPVEHWTEALGCEES*
Ga0099830_106114572	3300009088	Vadose Zone Soil	MVTQEFWEPADLVLVSSPPGFCVQGSVVYCRKLPSEDYILGIRLDAPVEEWMEQLGLGESFQTLA*
Ga0099830_106481152	3300009088	Vadose Zone Soil	VPTKNVSRFGIQMVTQEFWEPAGLVLVSSPPGFCVQGSVVYCKKLPSEDYIVGIRLDAPVEEWMEQRGLGESCQTLA*
Ga0099828_112562791	3300009089	Vadose Zone Soil	PDELVLVSSPPGFCVQGSVVYCKKLPSDDHVLGIRLDAPVEHWNETLGFGES*
Ga0066709_1000979892	3300009137	Grasslands Soil	VENVSRSGMKIVTQEFWEPAEMVLLSSPPGFCVQGSVVYCKKLPSDDFVLGISLDVPIENWAETLAFGES*
Ga0127477_1604602	3300010071	Grasslands Soil	GIQMVTQKFWEPTELVLVSSPPEFCAQGSVVYCKKLPSDDYIVGIRLEAPVEHWNEALGLGSPDKP*
Ga0137392_102156311	3300011269	Vadose Zone Soil	MIAQRFWEPSELVLVSSPPGFFVQGSIVYCKKLPSDDHVLGIRLDTAVENWMETLGFQDS
Ga0137391_101617451	3300011270	Vadose Zone Soil	MVTQKSWEPAELVLVSFPPGFYLQGLVIYCKKLPSEDYLLGIRLHAPVEDWSETLGLRVSW*
Ga0137391_104670854	3300011270	Vadose Zone Soil	GIRLVTREFWEPAEPVLVSSPPGFCVQGSVVYCKKLPSDDYVLGLSLDAPVEDWTEAMRDSGA*
Ga0137393_102240911	3300011271	Vadose Zone Soil	NVSRFGIQMVTQEFWEPADLVLVSSPPGFCVQGSVVYCKKLPSEDYMLGIRLDAPVEEWMEQLGLGESSQTLA*
Ga0137399_102298242	3300012203	Vadose Zone Soil	MKMVTQEFWKPDELVLVSSPPGFCAQGSVVYCKKLPSDDYVLGISLDAPVEDWTETLGFGES*
Ga0137399_106290491	3300012203	Vadose Zone Soil	KNVSRFGIQMVTQEFWEPADLVLVSSPPGFCVQGSVVYCNKLPSEDYILGIRLDAPVEEWMEQLGLGSPFRP*
Ga0137362_102279031	3300012205	Vadose Zone Soil	KFWEPAELVLVSSPPGFCVQGSVVYCKKLPSEDHILGIRLGTPVEHWIEALGLGES*
Ga0137362_107030561	3300012205	Vadose Zone Soil	MVAQEFWEPADTVLVSSPPGFCVQGSVVYCRKLPSEDYILGIRLDAPVEEWMEQLGLGESFQTLA*
Ga0137362_107754731	3300012205	Vadose Zone Soil	MVTQEFWEPAGLVLVSSPPGFCVQGSVVYCKKLPSEDYILGIRLDAPVEEWMEQLGL
Ga0137362_109303181	3300012205	Vadose Zone Soil	LVTREFWEPAEPVLVSSPPGFCVQGSVVYCRKLPSDDYVLGLSLDAPVEDWIEKLGLRCPDES*
Ga0137362_112099421	3300012205	Vadose Zone Soil	QEFWKPDEQVLVSSPPGFCVQGSVVYCNKLPSDDYVVGLSFNGPVEDWTETLACGES*
Ga0137377_103324834	3300012211	Vadose Zone Soil	EVVPTKNVSRFGIQIVAQEFWEPADLVLVSSPPGFCVQGSVVYCNKLPSEDYILGIRLDAPVEEWMEQLGLGSPFRP*
Ga0137377_108620013	3300012211	Vadose Zone Soil	EVVPTKNVSRFGIQIVAQEFWEPADLVLVSSPPGFCVQGSVVYCKKLPSEDYILGIRLDAPVEEWMEQLGLGSPFRPEPKAGG*
Ga0137386_103704051	3300012351	Vadose Zone Soil	IVSTENVSSLGIQTIAQKFWEPSEFVLVSSPPGFFVQGSIVYCKKLPSDDHVLGIRFDSAVEHWTEILGLRD*
Ga0137360_101134751	3300012361	Vadose Zone Soil	IQMVTQEFWEPADLVLVSSPPGFCVQGSVVYCRKLPSEDYILGIRLDAPVEEWMEQLGLGESFQTLA*
Ga0137360_105053731	3300012361	Vadose Zone Soil	WEPAELVLVSCPPGFCVQGSVVYCKKLPSEDYMLGIRLDAPVEEWMEELGLAESCGTLT*
Ga0137360_115170682	3300012361	Vadose Zone Soil	QMVTQEFWEPADLVLVSSPPGFCVQGSVVYCKKLPSEDYILGIRLDAPVEEWMEQLGLGESCQTLA*
Ga0137361_100252891	3300012362	Vadose Zone Soil	MVTREFWKPAELVLVSSPPGFCVQGSVVYCRKLPSDDYVLGLSLDAPVEDWTEACGIRGA
Ga0137361_108842171	3300012362	Vadose Zone Soil	SPPGFCVQGSVVYCKKLPSDDYMLGIRLDASVEHWIEALGFGASG*
Ga0137361_115673891	3300012362	Vadose Zone Soil	SRFGIQMVTQEFWEPADLVLVSSPPGFCVQGSVVYCKKLPSEDYMLGIRLDAPVEEWMEQLGLGESSQTLA*
Ga0134052_12099571	3300012393	Grasslands Soil	SRFGIQMVTQEFWEPAELVLVSSPPGFCVQGSVVYCKKLPSDDYILGIRLDASVEHWMEALRLGEA*
Ga0137358_100159531	3300012582	Vadose Zone Soil	NISRTGIRLVTREFWEPAEPVLVSSPPEFCVQGSVVYCKKLPSDDYVLGLSLDAPVEDWTEACGIRGA*
Ga0137358_102942411	3300012582	Vadose Zone Soil	MVSQKFWEPDELVLVSSPPRFFVQGSVVYCKKLPSDDHLLGVRFDASVEHWIETLGLREARVPQPSV*
Ga0137358_107055481	3300012582	Vadose Zone Soil	AGIQMLTQKFWEPDEMVLVSSPPGFFVRGSVVYCKKLPSDNHLLGIRLDAPVDHWSETLGPAAS*
Ga0137398_105152522	3300012683	Vadose Zone Soil	MVTQEFWEPTDLVLVSSPPGFCVQGSVVYCKKRPSEDYVLGIRLDAPVEEWMEQLGLGESCQTLA*
Ga0137394_101966241	3300012922	Vadose Zone Soil	KNVSRLGIQMVTQEFWKPADLVLVSSPPGFCVQGSVVYCMKLPSEDYILGIRLDAPLGEWMEQLGLGSPFRPEPKAGG*
Ga0137394_102094824	3300012922	Vadose Zone Soil	LVSSPPGFCIQGSVVYCKKLPSEDYILGIRLDAPVEEWMEQLGLGESSQTLA*
Ga0137394_114341821	3300012922	Vadose Zone Soil	NISGAGMQMVTQGFWKPDELVLVSSPPGFCVQGSVVYCKKLPSDDHVLGIRLDAPVEHWNETLGFGES*
Ga0137359_100038347	3300012923	Vadose Zone Soil	MVTQKLWESAELVLVSSPPGFLVQGSVVYCKKLPSDDYIVGIRLDAPVKHWIEALGLGEA
Ga0137359_102098415	3300012923	Vadose Zone Soil	EPAEPVLVSSPPGFCVQGSVVYCRKLPSDDYVLGLSLDAPVEDWIEKLGLRCPDES*
Ga0137359_109003691	3300012923	Vadose Zone Soil	PTENVSRAGIQMVTQKFWEPDELVLVSSPPGFFVQGSVVYCRKLPSDDHLLGIRLDAPVEHWIETLGPGVS*
Ga0137359_109346852	3300012923	Vadose Zone Soil	EIVPTENISKAGIQMVSQKFWEPDELVLVSSPPRFFVQGSVVYCKKLPSDDHLLGVRFDASVEHWIETLGLREARVPQPSV*
Ga0137419_100261986	3300012925	Vadose Zone Soil	MVTQEFWEPADLVLVSSPPGFCVQGSVVYCKKLPSDDYIVGIRLDAPVEHWTEALGLRES
Ga0137419_119472461	3300012925	Vadose Zone Soil	MVAQEFWEPADLVLVSSPPGFCIQGSVVYCKKLPSEDYILGIRLDAPVEEWM
Ga0137416_106022471	3300012927	Vadose Zone Soil	KNVSRFGIQMVTQEFWEPADLVLVSSPPGFCVQGSVVYCKKLPSEDYILGIRLDAPVEEWMEQLGLGESFQTLA*
Ga0137404_106206152	3300012929	Vadose Zone Soil	KPAVFEIVPTENISRVGIQMVTQKFWEPDETVLVSSPPGFFVHGSVVYCKKLPSDDHLLGIRFDASVEHWIDALRPSAS*
Ga0137404_106809392	3300012929	Vadose Zone Soil	MVAQEFWEPADLVLVSSPPGFCIQGSVVYCKKLPSEDYILGIRLDAPVEKWMEQLGLGESFQT
Ga0137404_110416701	3300012929	Vadose Zone Soil	MVTQEFWKPDEQVLVSSPPGFCVQGSVVYCKKLPSNDYVLGISLDAPVEDWTETLGFGES
Ga0137404_115813241	3300012929	Vadose Zone Soil	KPAVFEIVPTENISRVGIQMVTQKFWEPDELVLVSSPPGFFVQGSVVYCRKLPSDDHLLGIRLDTPIEHWSETLGPSVS*
Ga0137407_114261641	3300012930	Vadose Zone Soil	QEFWEPADLVLVSSPPGICVRGSVVYCRKLPSEDYILGIRLDAPVKHWIETPGLAEF*
Ga0137410_111716571	3300012944	Vadose Zone Soil	MLTQRFWDPAEMVLVSSPPGFCLQGSVVYCNKLPSDDYVLGIRLNAPVEHWMDTLGLGES
Ga0137410_112338821	3300012944	Vadose Zone Soil	GIQMVTQKFWEPDELVLVSSPPGFFVQGSVVYCRKLPSDDHLLGIRLDAPVEHWIETLGPGVS*
Ga0137420_12220103	3300015054	Vadose Zone Soil	MKMVTQEFWKPDELVLVSSPPGFCAQGSVVYCKKLPSDDYVLGISLDAPVE
Ga0137418_105517263	3300015241	Vadose Zone Soil	PTENVSRFGIQMVTQEFWEAAELVLVSSPPGFCVQGSVVYCKKLPSDDYMLGIRLDASVEHWIEALGFGASC*
Ga0137418_109115151	3300015241	Vadose Zone Soil	MVSQKFWEPDELVLVSSPPGFFVQGAVVYCKKLPSDDHLLGIRFDASVEHWIETLGLRESRLPPPV*
Ga0179594_102326703	3300020170	Vadose Zone Soil	NISRSGMQMVTQEFWKPDEQVLVSSPPGFCVQGSVVYCKKLPSDDYFLGISLDAPVENWTDTLGLGD
Ga0179592_104650522	3300020199	Vadose Zone Soil	RFGIQMVTQEFWEPADLVLVSSPPGFCVQGSVVYCKKLPSDDHIVGIRLDAPVEHWIEALGLRES
Ga0210400_109912441	3300021170	Soil	EPAELVLVSSPPGFCVQGSAVYCKKLPSEDYILGIRLDAPVEHWRIEALGFGES
Ga0210396_1000076322	3300021180	Soil	MKIVTREFWEPEEPVLLSSPPGFCIHGSVVYCKKLPSDNYFVGISLDAPLEDWTETLGLVES
Ga0210402_118186771	3300021478	Soil	MQMVTQELWKPDEQVLVSSPPGFCVQGSVVYCKKLPSDNYFLGISLDAPLELGLVDWDSGND
Ga0137417_13659885	3300024330	Vadose Zone Soil	MVTQEFWEPTDLVLVSSPPGFCVQGSVVYCKKLPSEDYILGIRLDAPVEEWMEQLGLGESCQTLA
Ga0207646_102354153	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	TENISRAGIQMLTQKFWEPDELVLVSSPPGFFVQGSVVYCRKLPSDDHLLGIRLDAPVEPWSETLAPAAS
Ga0209802_11271801	3300026328	Soil	LEVVPTENISRNGIQMVTREFWKPAELVLVSSPPGFCVQGSVVYCKKFPSDDYILGIRLDAPVEHGIEALGFRGS
Ga0209158_10610393	3300026333	Soil	NVSRSGMKIVTQEFWEPAEMVLLSSPPGFCVQGSVVYCKKLPSDDFVLGISLDVPIENWAETLAFGES
Ga0209690_10197873	3300026524	Soil	VENVSRSGMKIVTQEFWEPAEMVLLSSPPGFCVQGSVVYCKKLPSDDFVLGISLDVPIENWAETLAFGES
Ga0209160_10473874	3300026532	Soil	TREFWKPAELVLVSSPPGFCVQGSVVYCKKFPSDDYILGIRLDAPVEHGIEALGFRGS
Ga0179593_10188974	3300026555	Vadose Zone Soil	STKNVSRFGIQMVTQEFWEPTDLVLVSSPPGFCVQGSVVYCKKLPSEDYILGIRLDAPVEEWMEQLGLGESCQTLA
Ga0179587_107835561	3300026557	Vadose Zone Soil	ENISRTGIRLVTREFWEPAEPVLVSSPPEFCVHGSVVYCKKLPSDDYVLGLSLDAPVEHWTEACGDSGA
Ga0209076_10082342	3300027643	Vadose Zone Soil	MVCRRFWERAEMVLVSSPPGFYVQGSVVYCKKLPSEDYILGIRLDAPVEHWIEVLGLGES
Ga0209076_11616551	3300027643	Vadose Zone Soil	PTENISRTGIRLVTREFWEPAEPVLVSSPPEFCVQGSVVYCKKLPSDDYVLGLSLDAPVEDWTEAMRDSGA
Ga0209180_104670191	3300027846	Vadose Zone Soil	VTRKSWEPAELVLVSFPPGFYLQGLVIYCKKLPSEDYLLGIRLHAPVEDWSETLGLRVSW
Ga0209180_105530531	3300027846	Vadose Zone Soil	VGIQMVTQKFWGPDELVLVSSPPGFFVQGSVVYCRKLPSDDYLLGIRLDAPVEHWSETFGLGEPRVPQPSV
Ga0209180_106027992	3300027846	Vadose Zone Soil	AGLVLVSSPPGFCVQGSVVYCKKLPSEDYIVGIRLDAPVEEWMEQRGLGESCQTLA
Ga0209180_107264691	3300027846	Vadose Zone Soil	WDRAEMVLVSSPPGFCVQGSVVYCKKLPSDDYVLGIRLDAPVEHWIEALGLVES
Ga0209701_106173711	3300027862	Vadose Zone Soil	VPTKNVSRFGIQMVTQEFWEPAGLVLVSSPPGFCVQGSVVYCKKLPSEDYIVGIRLDAPVEEWMEQRGLGESCQTLA
Ga0209488_110994141	3300027903	Vadose Zone Soil	VSRFGIQMVSRRFWERAEMVLVSSPPGFYVQGSVVYCKKLPSEDYILGIRLDAPVEHWIEVLGLGES
Ga0137415_108233551	3300028536	Vadose Zone Soil	PAELVLVSCPPGFCVQGSVVYCKKLPSEDYMLGIRLDAPVEEWIEELGLAESCGTLT
Ga0222749_107277022	3300029636	Soil	KNVSRQGIKMVAQKLWEPAELVLVSSPPGFLVQGSVVYCKKLPSDDYILGIRLDAPVKHWIEALGLGEA
Ga0307468_1007026842	3300031740	Hardwood Forest Soil	ISRAGIQMVTQKFWEPDELVLVSSPPGFFVQGSVVYCRKLPSDDHLLGIRLDAPVEHWSETLGPGES
Ga0307475_100094021	3300031754	Hardwood Forest Soil	RSGMQMLTRELWKPDELVLVSSPPGFCVQGSVIYCKKLPSDDYFVGISLDAPVEDWTETLGFGEP
Ga0307475_102722241	3300031754	Hardwood Forest Soil	MVLVSSPPGFYAQGSVVYCKKLPSEDYILGIRLDAPVEHWIEVLGLGESSEP
Ga0307475_107252352	3300031754	Hardwood Forest Soil	GMQIVTQEFWEPGELVLVSSPPGFCVQGSVAYCKKLPSDDYVLGIRLNAPVDDWIKAIGVEESRRI
Ga0316044_1273321	3300031810	Soil	AETVLVSSPLGLCVQGSVVYCNKLPSDDHIVGIRLDAPIERWMEALEFRES
Ga0307473_100298131	3300031820	Hardwood Forest Soil	QELWEPAEVVLVSCPPGFCVQGSVVYCKKLPSDDYVLGISLEAPVADWTEVLGFEES
Ga0307479_100190418	3300031962	Hardwood Forest Soil	PGVFEVVPTENVSRLGIRLVTQNCWEPAETVLVSSPPGLCVQGSVVYCKKLPSDDHILGIRLDAPVEQWSETLGLVDS
Ga0307479_101820972	3300031962	Hardwood Forest Soil	MVLVSSPPEFYVQGSVVYCKKLPSEDYILGVRLDAPVEHWIEVLGLGES
Ga0307471_1027536121	3300032180	Hardwood Forest Soil	TLGIRLVTRQFWESAETVLISSPPGLCVQGSVVYCKKLPSDDHLLGIRLDAPIERWIEALEDRES

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters