Metagenome Family F094911

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094911
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	42 residues
Representative Sequence	MPEFFEKSPLSGAGKHPDFQVTSCHHFVTTNVDFAYIESE
Number of Associated Samples	35
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	26.47 %
% of genes near scaffold ends (potentially truncated)	59.05 %
% of genes from short scaffolds (< 2000 bps)	67.62 %
Associated GOLD sequencing projects	30
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (61.905 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface (37.143 % of family members)
Environment Ontology (ENVO)	Unclassified (44.762 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (42.857 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74 1JGI2172J19969_100620651 2JGI2172J19969_101173291 3JGI2172J19969_101772202 4JGI2173J19968_100690611 5JGI2173J19968_101949521 6JGI2171J19970_100164712 7JGI2171J19970_103052972 8JGI24422J19971_100997713 9JGI24422J19971_101650851 10JGI24422J19971_103746142 11JGI24422J19971_103834472 12KH04A_12789281 13Ga0070723_103120031 14Ga0078746_10045614 15Ga0074469_100229131 16Ga0074469_106633121 17Ga0070725_105062812 18Ga0111032_10533133 19Ga0115371_112093022 20Ga0115863_10299251 21Ga0115863_10341183 22Ga0115863_10741932 23Ga0115863_10836922 24Ga0115863_10892583 25Ga0115863_11780164 26Ga0115863_11999831 27Ga0115863_13055312 28Ga0115863_13800401 29Ga0115863_16218032 30Ga0115863_17457771 31Ga0118736_101061612 32Ga0118736_101297612 33Ga0118736_101462922 34Ga0114921_100495001 35Ga0114921_100976174 36Ga0114921_101108311 37Ga0114921_101261182 38Ga0114921_101270163 39Ga0114921_102413781 40Ga0114921_103049781 41Ga0114921_104191723 42Ga0114921_105088771 43Ga0114921_105588631 44Ga0114921_105690541 45Ga0114921_106268232 46Ga0114921_106554342 47Ga0114921_106854002 48Ga0114921_106896221 49Ga0114921_107927941 50Ga0114921_108554051 51Ga0114921_111837511 52Ga0114925_100224743 53Ga0114925_103720421 54Ga0114925_106761251 55Ga0114925_114104531 56Ga0114930_100022864 57Ga0114920_100609451 58Ga0114920_101327491 59Ga0114920_108245601 60Ga0114920_109024411 61Ga0118733_1002576321 62Ga0118733_1010519691 63Ga0118733_1010967031 64Ga0118733_1030823603 65Ga0118733_1086096271 66Ga0118733_1095378501 67Ga0164321_100082392 68Ga0164321_100250441 69Ga0164321_100280002 70Ga0164321_101102322 71Ga0164321_104777321 72Ga0164321_107036841 73Ga0224506_104830301 74Ga0209978_100093483 75Ga0209978_100290781 76Ga0209978_100317983 77Ga0209978_100969942 78Ga0209978_101733152 79Ga0209978_103963591 80Ga0209978_104898361 81Ga0209978_105434841 82Ga0209979_10058043 83Ga0209977_100120764 84Ga0209977_100786291 85Ga0209977_105537121 86Ga0233415_102284421 87Ga0255052_105557782 88Ga0209635_100668711 89Ga0209635_100776521 90Ga0209635_102726542 91Ga0209635_105676761 92Ga0209427_101981862 93Ga0209427_104915491 94Ga0209427_105323432 95Ga0209536_1021563531 96Ga0307427_10205243 97Ga0307439_10116382 98Ga0307380_100116069 99Ga0307380_100170333 100Ga0307380_100501004 101Ga0315548_10529822 102Ga0315548_12604881 103Ga0307379_100720393 104Ga0315539_10107641 105Ga0316193_115159221
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74 1JGI2172J19969_100620651 2JGI2172J19969_101173291 3JGI2173J19968_100690611 4JGI2171J19970_100164712 5JGI2171J19970_103052972 6JGI24422J19971_100997713 7JGI24422J19971_101650851 8Ga0070723_103120031 9Ga0078746_10045614 10Ga0074469_100229131 11Ga0074469_106633121 12Ga0111032_10533133 13Ga0115371_112093022 14Ga0115863_10299251 15Ga0115863_10741932 16Ga0115863_10892583 17Ga0115863_11780164 18Ga0115863_11999831 19Ga0115863_13055312 20Ga0115863_16218032 21Ga0115863_17457771 22Ga0118736_101297612 23Ga0118736_101462922 24Ga0114921_100495001 25Ga0114921_101261182 26Ga0114921_102413781 27Ga0114921_105588631 28Ga0114921_105690541 29Ga0114921_106268232 30Ga0114921_106554342 31Ga0114921_106854002 32Ga0114921_106896221 33Ga0114921_107927941 34Ga0114925_103720421 35Ga0114925_106761251 36Ga0114920_100609451 37Ga0114920_101327491 38Ga0114920_109024411 39Ga0118733_1002576321 40Ga0118733_1010967031 41Ga0118733_1030823603 42Ga0118733_1086096271 43Ga0118733_1095378501 44Ga0164321_100082392 45Ga0164321_101102322 46Ga0164321_107036841 47Ga0209978_100290781 48Ga0209978_101733152 49Ga0209978_104898361 50Ga0209977_100786291 51Ga0233415_102284421 52Ga0255052_105557782 53Ga0209635_100668711 54Ga0209427_101981862 55Ga0209427_104915491 56Ga0209427_105323432 57Ga0209536_1021563531 58Ga0307380_100116069 59Ga0307380_100501004 60Ga0315548_12604881 61Ga0316193_115159221
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40 1Ga0209978_100317983 2JGI2172J19969_100620651 3JGI2172J19969_101173291 4JGI2173J19968_100690611 5JGI2173J19968_101949521 6JGI2171J19970_100164712 7JGI2171J19970_103052972 8JGI24422J19971_100997713 9JGI24422J19971_101650851 10JGI24422J19971_103746142 11KH04A_12789281 12Ga0070723_103120031 13Ga0078746_10045614 14Ga0074469_100229131 15Ga0074469_106633121 16Ga0070725_105062812 17Ga0115371_112093022 18Ga0115863_10299251 19Ga0115863_10341183 20Ga0115863_10741932 21Ga0115863_10836922 22Ga0115863_10892583 23Ga0115863_11780164 24Ga0115863_13055312 25Ga0115863_13800401 26Ga0115863_16218032 27Ga0115863_17457771 28Ga0118736_101297612 29Ga0118736_101462922 30Ga0114921_100495001 31Ga0114921_101261182 32Ga0114921_101270163 33Ga0114921_102413781 34Ga0114921_104191723 35Ga0114921_105588631 36Ga0114921_105690541 37Ga0114921_106554342 38Ga0114921_106854002 39Ga0114921_106896221 40Ga0114921_107927941 41Ga0114921_108554051 42Ga0114921_111837511 43Ga0114925_100224743 44Ga0114925_106761251 45Ga0114930_100022864 46Ga0114920_100609451 47Ga0114920_101327491 48Ga0114920_109024411 49Ga0118733_1002576321 50Ga0118733_1010519691 51Ga0118733_1030823603 52Ga0118733_1086096271 53Ga0118733_1095378501 54Ga0164321_100082392 55Ga0164321_100250441 56Ga0164321_100280002 57Ga0164321_101102322 58Ga0164321_104777321 59Ga0164321_107036841 60Ga0224506_104830301 61Ga0209978_100093483 62Ga0209978_100290781 63Ga0209978_100969942 64Ga0209978_101733152 65Ga0209978_103963591 66Ga0209978_104898361 67Ga0209978_105434841 68Ga0209977_100120764 69Ga0209977_100786291 70Ga0209977_105537121 71Ga0233415_102284421 72Ga0255052_105557782 73Ga0209635_100668711 74Ga0209427_101981862 75Ga0209427_104915491 76Ga0209427_105323432 77Ga0209536_1021563531 78Ga0307427_10205243 79Ga0307439_10116382 80Ga0307380_100116069 81Ga0307380_100501004 82Ga0315548_10529822 83Ga0315548_12604881 84Ga0307379_100720393 85Ga0315539_10107641 86Ga0316193_115159221
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.15
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.15
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13385	Laminin_G_3	8.57
PF07676	PD40	4.76
PF01408	GFO_IDH_MocA	2.86
PF07900	DUF1670	1.90
PF04542	Sigma70_r2	1.90
PF13360	PQQ_2	1.90
PF02517	Rce1-like	1.90
PF00932	LTD	1.90
PF13495	Phage_int_SAM_4	1.90
PF14871	GHL6	0.95

Showing 1 to 10 of 44 entries

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COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.90
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.90
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	1.90
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.90
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	1.90
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.90
COG1312	D-mannonate dehydratase	Carbohydrate transport and metabolism [G]	0.95
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.95
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG2006	Uncharacterized conserved protein, DUF362 family	Function unknown [S]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.86 %
Unclassified	root	N/A	37.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.86 %
Unclassified	root	N/A	37.14 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.95 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.90 %
Unclassified	root	N/A	37.14 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.95 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.86 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.90 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	23.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.86 %
Unclassified	root	N/A	37.14 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.95 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.95 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.86 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.90 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.95 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.90 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	0.95 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	20.95 %
Unclassified	root	N/A	37.14 %

Name	Rank	Taxonomy	Distribution
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.95 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.95 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.90 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.95 %
candidate division TA06	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06	0.95 %
Candidatus Aminicenantes	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes	1.90 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.95 %
Lentisphaeria	class	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria	0.95 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	5.71 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.95 %
Unclassified	root	N/A	37.14 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	4.76 %

Name	Rank	Taxonomy	Distribution
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.95 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.95 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.90 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.95 %
candidate division TA06 bacterium DG_26	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium DG_26	0.95 %
Halanaerobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales	0.95 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.95 %
Lentisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Lentisphaerales	0.95 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	3.81 %
Planctomycetes bacterium B3_Pla	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium B3_Pla	3.81 %
Planctomycetes bacterium RBG_13_44_8b	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_44_8b	0.95 %
Unclassified	root	N/A	37.14 %
unclassified Aminicenantes	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes	1.90 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	1.90 %

Name	Rank	Taxonomy	Distribution
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.95 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.95 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.90 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.95 %
candidate division TA06 bacterium DG_26	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium DG_26	0.95 %
Candidatus Aminicenantes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	1.90 %
Halobacteroidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales → Halobacteroidaceae	0.95 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.95 %
Lentisphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Lentisphaerales → Lentisphaeraceae	0.95 %
Phycisphaerae bacterium SG8_4	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium SG8_4	1.90 %
Planctomycetes bacterium B3_Pla	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium B3_Pla	3.81 %
Planctomycetes bacterium RBG_13_44_8b	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_44_8b	0.95 %
Unclassified	root	N/A	37.14 %
unclassified Phycisphaerales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales	3.81 %

Name	Rank	Taxonomy	Distribution
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.95 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.95 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.90 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.95 %
candidate division TA06 bacterium DG_26	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium DG_26	0.95 %
Candidatus Aminicenantes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	1.90 %
Lentisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Lentisphaerales → Lentisphaeraceae → Lentisphaera	0.95 %
Orenia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales → Halobacteroidaceae → Orenia	0.95 %
Paludisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera	0.95 %
Phycisphaerae bacterium SG8_4	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium SG8_4	1.90 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	3.81 %
Planctomycetes bacterium B3_Pla	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium B3_Pla	3.81 %
Planctomycetes bacterium RBG_13_44_8b	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_44_8b	0.95 %
Unclassified	root	N/A	37.14 %

Name	Rank	Taxonomy	Distribution
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.95 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.95 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.90 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.95 %
candidate division TA06 bacterium DG_26	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium DG_26	0.95 %
Candidatus Aminicenantes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	1.90 %
Lentisphaera araneosa	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Lentisphaerales → Lentisphaeraceae → Lentisphaera → Lentisphaera araneosa	0.95 %
Orenia metallireducens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales → Halobacteroidaceae → Orenia → Orenia metallireducens	0.95 %
Paludisphaera rhizosphaereae	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera rhizosphaereae	0.95 %
Phycisphaerae bacterium SG8_4	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium SG8_4	1.90 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	3.81 %
Planctomycetes bacterium B3_Pla	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium B3_Pla	3.81 %
Planctomycetes bacterium RBG_13_44_8b	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_44_8b	0.95 %
Unclassified	root	N/A	37.14 %

Name	Rank	Taxonomy	Distribution
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.95 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.95 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.90 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.95 %
candidate division TA06 bacterium DG_26	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium DG_26	0.95 %
Candidatus Aminicenantes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	1.90 %
Lentisphaera araneosa HTCC2155	strain	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Lentisphaerales → Lentisphaeraceae → Lentisphaera → Lentisphaera araneosa → Lentisphaera araneosa HTCC2155	0.95 %
Orenia metallireducens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales → Halobacteroidaceae → Orenia → Orenia metallireducens	0.95 %
Paludisphaera rhizosphaereae	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera rhizosphaereae	0.95 %
Phycisphaerae bacterium SG8_4	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium SG8_4	1.90 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	3.81 %
Planctomycetes bacterium B3_Pla	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium B3_Pla	3.81 %
Planctomycetes bacterium RBG_13_44_8b	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_44_8b	0.95 %
Unclassified	root	N/A	37.14 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300027861\|Ga0233415_10228442	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
(restricted) 3300027865\|Ga0255052_10555778	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium B3_Pla	563	Open in IMG/M
3300001751\|JGI2172J19969_10062065	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1185	Open in IMG/M
3300001751\|JGI2172J19969_10117329	Not Available	764	Open in IMG/M
3300001751\|JGI2172J19969_10177220	Not Available	589	Open in IMG/M
3300001752\|JGI2173J19968_10069061	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300001752\|JGI2173J19968_10194952	Not Available	563	Open in IMG/M
3300001753\|JGI2171J19970_10016471	All Organisms → cellular organisms → Bacteria	3333	Open in IMG/M
3300001753\|JGI2171J19970_10305297	Not Available	502	Open in IMG/M
3300001854\|JGI24422J19971_10099771	All Organisms → cellular organisms → Bacteria	1488	Open in IMG/M

Showing 1 to 10 of 102 entries

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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.19%
Terrestrial	Environmental → Terrestrial	3.81%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	90.48%
Sediment	Environmental → Aquatic → Sediment	5.71%
Soil	Environmental → Terrestrial → Soil	3.81%

Habitat	Taxonomy	Distribution
Clay	Environmental → Terrestrial → Soil → Clay	3.81%
Coastal	Environmental → Aquatic → Marine → Coastal	10.48%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	5.71%
Inlet	Environmental → Aquatic → Marine → Inlet	1.90%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	15.24%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.95%
Oceanic	Environmental → Aquatic → Marine → Oceanic	55.24%
Sediment	Environmental → Aquatic → Marine → Sediment	0.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.71%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	4.76%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	55.24%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	10.48%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	10.48%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	5.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.71%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	3.81%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	37.14%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	18.10%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	9.52%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	5.71%
Marine Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Sediment	2.86%
Marine Sediment	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Sediment	0.95%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.90%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	2.86%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	1.90%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Sediment	0.95%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.95%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.95%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.90%
Sediment, Intertidal	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Sediment, Intertidal	10.48%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	3.81%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001751	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32	Environmental	Open in IMG/M
3300001752	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30	Environmental	Open in IMG/M
3300001753	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-3-24_28	Environmental	Open in IMG/M
3300001854	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-52-54	Environmental	Open in IMG/M
3300003455	Marine sediment microbial communities from Douglas Channel, Canada, that are oil-degrading - Sample S16-KH04A	Environmental	Open in IMG/M
3300005612	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2	Environmental	Open in IMG/M
3300005821	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 25 cmbsf, PM1	Environmental	Open in IMG/M
3300005832	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.41_BBB	Environmental	Open in IMG/M
3300005920	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd00.2	Environmental	Open in IMG/M
3300007871	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 75 cmbsf. Combined Assembly of MM2PM2	Environmental	Open in IMG/M

Showing 1 to 10 of 35 entries

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI2172J19969_100620651	3300001751	Marine Sediment	SCKTSEFFEMSPLSGAGKHPDFQVTLCLHFVTTDVDFAYIESE*
JGI2172J19969_101173291	3300001751	Marine Sediment	MIEFFEKSPLSGAGKRPDFQVTSCHRFDTTNVNFAYVESE*
JGI2172J19969_101772202	3300001751	Marine Sediment	MPEFFEKSPLSGAEKQPDFQVTSCHHFVTTNVDFAYIEFE*
JGI2173J19968_100690611	3300001752	Marine Sediment	MPEFFKKAPLSEAKKHPDFQVTQCFHFVTTNANFAYVQSE*
JGI2173J19968_101949521	3300001752	Marine Sediment	MPEFFEKSPLSEAEKHPDFQVTSCLRFVTTNVDFAYTESE*
JGI2171J19970_100164712	3300001753	Marine Sediment	MPEFYEKSLLSGAGKQPDFQVTFYHHFVTTNIKFAYIESE*
JGI2171J19970_103052972	3300001753	Marine Sediment	MSESFEKSPFSGTGKHPDFHVTSCHHFVFTNVNFAYIKSE*
JGI24422J19971_100997713	3300001854	Marine Sediment	MNGKTPEFFKKPPLPGAEKHPDFQVTSCHQNVSTSVDFVYIESE*
JGI24422J19971_101650851	3300001854	Marine Sediment	MSPLSGAGKHPDFQVTLCRQNVYKNVDFAYIESE*
JGI24422J19971_103746142	3300001854	Marine Sediment	LFFLSCKIPEFFEKLPLSGAGKHPDFQVTLCLQNVTTDVDFAYIESE*
JGI24422J19971_103834472	3300001854	Marine Sediment	MSESFEKSPFSGTGKHPDFHVTSCHHFVFTNVNFAYIKFE*
KH04A_12789281	3300003455	Marine Sediment	CKTSEFFEKSPLSAAKKHPDFQVTSCHHFDTTNINFAYIESE*
Ga0070723_103120031	3300005612	Marine Sediment	MPEFFEKSPLSGAEKHHNFQVTSCHHFVTTNINFAYI
Ga0078746_10045614	3300005821	Marine Sediment	MSCKISELFEKSPLSGAEKHHNFQVTSYIHFDTTNVDFAYIESE*
Ga0074469_100229131	3300005832	Sediment (Intertidal)	KDLVFMTHKTPEIFEKSPLSGAGKHPDFQVTLCHHFDTTNTDFAYIESE*
Ga0074469_106633121	3300005832	Sediment (Intertidal)	TIKISEYFEKSPISGVEKHVNFHVTSCHQNDTTNTNFAYTGSE*
Ga0070725_105062812	3300005920	Marine Sediment	MSESFEMPPLSEAEKHPDFQVTSCHHFVTTNVDFAYI
Ga0111032_10533133	3300007871	Marine Sediment	MALNGGKPPLSGAEKHPDFQVTSCLRFVTTNVDFAYVESE*
Ga0115371_112093022	3300008470	Sediment	MSFGMDPPAHRTKSTLPTSFKTPEFFEKSPLSGAGKHPDFMVTSCHHFDTTNADFAYIESE*
Ga0115863_10299251	3300009034	Sediment, Intertidal	MSELFKKSPPPEAEKHPDFQVTVCHHFDTTNVDFAYIESE*
Ga0115863_10341183	3300009034	Sediment, Intertidal	MTEFFEKSSLSGAGKHSDFQVTSCHHFDTTNVNFAYIESE*
Ga0115863_10741932	3300009034	Sediment, Intertidal	MLQFIEKSPLSGAGKHPDIQVTLCLQNVSTDVNFAYIESE*
Ga0115863_10836922	3300009034	Sediment, Intertidal	MPEFFEKTPLSGAEKHPDFQVTSCHQNDTTNVNFAYIKSE*
Ga0115863_10892583	3300009034	Sediment, Intertidal	MPEFFEKSPLSAAEKHPDFQVTVFLQNVTTNVDFAYIESE*
Ga0115863_11780164	3300009034	Sediment, Intertidal	MAVESCKKTPEFLKKSHLSGAGKHPDFQVTLCLQNVSTNADFAYIESE*
Ga0115863_11999831	3300009034	Sediment, Intertidal	KSPLSGAEKHHNFQVTSCHQNVSTNVDFAYIKSE*
Ga0115863_13055312	3300009034	Sediment, Intertidal	MKLSRLENCKMPEFFEMSLLSEARKHHNFQVTVCLQNVSTNVDFAYIESE*
Ga0115863_13800401	3300009034	Sediment, Intertidal	MSCKIPEFFENSPLSEAEKHPDFQVTLCIQNVTTNTDFAYIESE*
Ga0115863_16218032	3300009034	Sediment, Intertidal	MNCKIPQFFEKSPLSGAEKHPDLQVTSCLRFVTTNIKFNVLW
Ga0115863_17457771	3300009034	Sediment, Intertidal	TANKCPQNNPIFTSCKMPEFLEKSLLSEAKKHPDFQVTLCLHFVTTNVDFAYIGSE*
Ga0118736_101061612	3300009135	Marine Sediment	FMHCKIPEFFEISPLSGAGKHPDFQVTSCHHFDTTNADFAYIESE*
Ga0118736_101297612	3300009135	Marine Sediment	METLKIVTMHHENDPIFMHRKMLEFFEKTPLSETEKHPDFQETSCHQNFSTNIDFAYIKS
Ga0118736_101462922	3300009135	Marine Sediment	MPDFFKMSPLSGAKKHPDFQVTACLHFDTTIINFAYIESE*
Ga0114921_100495001	3300009150	Deep Subsurface	IFTSYKMPKFSEKLPLSGAEKHADFQVTSCLQNVSTNVDFAYIKSE*
Ga0114921_100976174	3300009150	Deep Subsurface	FEMSPLSGAGKHPDFLVTSCHHFVTTDVDFAYIESE*
Ga0114921_101108311	3300009150	Deep Subsurface	FEKSHLSGAGKHPDFQVTSCHQNVSTNVDFAYIESE*
Ga0114921_101261182	3300009150	Deep Subsurface	ESLKKAHLSGAGKHPDFQVTSCLHFVTTNVDFAYIESE*
Ga0114921_101270163	3300009150	Deep Subsurface	MPEFFEKSLLSGAGKHHNFQVTSCLHFVTTNVDFA
Ga0114921_102413781	3300009150	Deep Subsurface	QTKGTIPTNCKIPEFFEKSPLSGAGKHPDFQVTSCHHFVSTNVNFAYIKSE*
Ga0114921_103049781	3300009150	Deep Subsurface	EFFEKSPLSGTGKHPDFQVTLCLHFVTTNVDFAYIKSE*
Ga0114921_104191723	3300009150	Deep Subsurface	IFMICKTPEFFEKSPLSGAGKHPDFQVTLCHQNVSTDVDFAYIESE*
Ga0114921_105088771	3300009150	Deep Subsurface	KMPEFFEKSPLSGAGKHPDFQVTLCLHFDTTNVDFAYIESE*
Ga0114921_105588631	3300009150	Deep Subsurface	RESYKIPEFFENSPFSGVEKYPDFQVTSCHQNDTTNINFAYIESE*
Ga0114921_105690541	3300009150	Deep Subsurface	NIPLSCKMPEFFKKSPLSGAGKHPDFQVTFCLQNVSTNVNFAYSESE*
Ga0114921_106268232	3300009150	Deep Subsurface	MNCKIPEFLEKSPLSEAAKQPDFQVTSCHHFDTTNVDFAHIESE*
Ga0114921_106554342	3300009150	Deep Subsurface	YPVDMAVESCKKTPEFFEKSPLSGAEKHHNFQVTSYHHFDTANVDFAYIESE*
Ga0114921_106854002	3300009150	Deep Subsurface	EKPPLSGAKKHPDFQVTSCLHFDSTNIDFAYIESE*
Ga0114921_106896221	3300009150	Deep Subsurface	SEFFEMSPLSGAEKYHDSTVTSCLRFVTKDINFEDL*
Ga0114921_107927941	3300009150	Deep Subsurface	VSVKTSEFFEKSPLSEAGKHHNFQVTLCLQNVSTNADFAYIE
Ga0114921_108554051	3300009150	Deep Subsurface	EKSPLSRAKKHPDFQVTLCLHFVTTNVDFVYIESE*
Ga0114921_111837511	3300009150	Deep Subsurface	KSEITDKKSPLSGAEKHPYFQVTLCLHFVTTDVDFAYIESE*
Ga0114925_100224743	3300009488	Deep Subsurface	MSDITDAKSPLSGAEKHTDFQVTLCLQNVTTNVDFAYIESE*
Ga0114925_103720421	3300009488	Deep Subsurface	KSPLSGAEKHPDFQVTSCHHFVTTYANFAYIESE*
Ga0114925_106761251	3300009488	Deep Subsurface	KRQFSKAEKHPDFQVTSCHHFVTTNPKFTYIKSE*
Ga0114925_114104531	3300009488	Deep Subsurface	KSPLSEAEKHPDFQVTSCLHFVTTNVDFAYIESK*
Ga0114930_100022864	3300009499	Deep Subsurface	MPEFFKKSPFSGAEKHPDFQVTSCHHFDTTNADFAYIESE*
Ga0114920_100609451	3300009528	Deep Subsurface	KSPLSVSGKHPDLQVTFCHQNVTTNGNFAYIESE*
Ga0114920_101327491	3300009528	Deep Subsurface	IFYGCKMPGFFEKSHLSGAGKHPDFRVTSCHHFDTTNVDFAYIESE*
Ga0114920_108245601	3300009528	Deep Subsurface	DEIVDVRESCKTSEFFEKSPLSGAGKHPDFQVTLCLHFVTTDVDFAYIESE*
Ga0114920_109024411	3300009528	Deep Subsurface	MNCKTPEFFKNPPHSRAEKHPDFQVTSCHHFVTTYAIF
Ga0118733_1002576321	3300010430	Marine Sediment	LICNKIPEFLENSPLSEAGKHPDFQVTSCHHFDTTNANFA
Ga0118733_1010519691	3300010430	Marine Sediment	EKPPLSEAEKHPDFQVTSCHQNDTTNADFAYIESE*
Ga0118733_1010967031	3300010430	Marine Sediment	RATKHYNFQVTSCLQNDTTSVDFAYIESEFEGLI*
Ga0118733_1030823603	3300010430	Marine Sediment	FTSLKIPESFERSSHSETEKHPDFRVTLCLQNDTTSVDFAYIESE*
Ga0118733_1086096271	3300010430	Marine Sediment	MSFKIPELLEKSPLSEAEKHPNFQVTSCHQNDSTNI
Ga0118733_1095378501	3300010430	Marine Sediment	MAPFSGAVKHPDFQVTSCHQNDTTNVNFAYIESE*
Ga0164321_100082392	3300014903	Marine Sediment	MPEFFEKSSLSGAEKHRQNKVTSCHQNDTTNVDFAYIE
Ga0164321_100250441	3300014903	Marine Sediment	EKSPLSETGKHLDFQVTSCHHFVTTNAEFAYIESE*
Ga0164321_100280002	3300014903	Marine Sediment	MSESIKKPPFSGTEKHPDFQVTSCHHFDTTNVDFAYIESE*
Ga0164321_101102322	3300014903	Marine Sediment	GVIDSFALNCKMPEFFEKSPFSGTKKYPDFQVTSCLHFVTTNVNFAYIESE*
Ga0164321_104777321	3300014903	Marine Sediment	KSPLSGAEKHPDFQVTLCLQNDTTNPNFAYIESE*
Ga0164321_107036841	3300014903	Marine Sediment	EFFEKTPLSARKHPDFKVTLCHQNISTNVDFAYTESE
Ga0224506_104830301	3300022221	Sediment	GPIFIHCKMPKFLEKSPLSEAGKHPDFQVTVCLHFVTTNVDFAYIESE
Ga0209978_100093483	3300024263	Deep Subsurface	MRSKKSEFFEKSPLSGAEKHPDFQVTSCLHFVTTDAIFAYIESE
Ga0209978_100290781	3300024263	Deep Subsurface	MKLSMSESCKMPEFFEMSPRSGAGKYPDLQVTSCHHFDTTNVNFAYIEFE
Ga0209978_100317983	3300024263	Deep Subsurface	MPEFFEKSPLSGAGKHPDFQVTSCHHFVTTNVDFAYIESE
Ga0209978_100969942	3300024263	Deep Subsurface	ENDPIFMHRKMPEFFAKSPLSGAGKHPDFQVTLCLQNVSTNVDFAYIESE
Ga0209978_101733152	3300024263	Deep Subsurface	FEKLFLSEAGKHPDFQVTSCHQNDSITIDFAYIESE
Ga0209978_103963591	3300024263	Deep Subsurface	MNCKIPEFLEKSPLSEAAKQPDFQVTSCHHFDTTNVDFAHIESE
Ga0209978_104898361	3300024263	Deep Subsurface	MAPFSRAVKMPEFFEMSPLSGSKKHPDFQVTSCHQNVSTNVDFAYL
Ga0209978_105434841	3300024263	Deep Subsurface	TNSTLSGAGKHPDFQVTSCHHFVTTNVVFAYIESE
Ga0209979_10058043	3300024353	Deep Subsurface	MPEFFKKSPFSGAEKHPDFQVTSCHHFDTTNADFAYIESE
Ga0209977_100120764	3300024432	Deep Subsurface	PEFFEKPPLSGAGKHHNFQVTSCHQNVSTNADFAYIESE
Ga0209977_100786291	3300024432	Deep Subsurface	SFTLSCKMSEFFEKPPFSGAEKHPDFQVTACLRFVSTDVNSYEL
Ga0209977_105537121	3300024432	Deep Subsurface	MPEFFNKSPLSGAEKHPDFQVTSCHQNVSTNVDFAYIKS
(restricted) Ga0233415_102284421	3300027861	Seawater	VREAQRGISEFFEKPSLSGAEKHPDFRVTSCLHFDTTNVDFAYIKSE
(restricted) Ga0255052_105557782	3300027865	Seawater	QEQMLTRITQFFLSCQTPAFFENSPLSGAGKHPDFQVTSCHHFDTTNVNFTDIESE
Ga0209635_100668711	3300027888	Marine Sediment	VTSNVSEYLKNSTLSAAKKHPDFQVTLCIHFVTTNVKFKG
Ga0209635_100776521	3300027888	Marine Sediment	MPEFYEKSLLSGAGKQPDFQVTFYHHFVTTNIKFAYIESE
Ga0209635_102726542	3300027888	Marine Sediment	MPEFFEKSPLSGAEKQPDFQVTSCHHFVTTNVDFAYIEFE
Ga0209635_105676761	3300027888	Marine Sediment	MNGKTPEFFKKPPLPGAEKHPDFQVTSCHQNVSTSVDFVYIEAE
Ga0209427_101981862	3300027901	Marine Sediment	MAVESCKKTPEFFKKPPLSRAEKHPDFQVTSCHHFDTTNVDFA
Ga0209427_104915491	3300027901	Marine Sediment	LSKIAEFFSKSPISRAEKHPDLQVTLCLQNVTTNVDFAYIKSEKMLFFAKI
Ga0209427_105323432	3300027901	Marine Sediment	MPEFFEKLPFSEAKKHPDFQVTSCRHFDTTDVDFAYI
Ga0209536_1021563531	3300027917	Marine Sediment	KKSPLSLAAKHPNFRVTLCSQNDTTNIDFAYIESE
Ga0307427_10205243	3300031351	Salt Marsh	MPEFFEKSLLLRAEKHPDFQVTLCLRFVTTDVDFAYIKSE
Ga0307439_10116382	3300031356	Salt Marsh	MPEFFEKSPLLGAEKYPDFQVTLCLRNDTTNVDFAYIESE
Ga0307380_100116069	3300031539	Soil	MSKFFAKSTFSGAEKHPDFQVTSCLRNVSTDVNFTYIESE
Ga0307380_100170333	3300031539	Soil	MSEFFEKSLLSGAGKHPDFQVTLCLHFVTTNVDFAYIKSE
Ga0307380_100501004	3300031539	Soil	MPEFLEKSRLSVAGKHLDFQVTSCHHFVSTDVDFAYIESE
Ga0315548_10529822	3300031551	Salt Marsh Sediment	MPEFFEKLPLSGAEKHLDFQVTSCHRFISTNVDFAYIESE
Ga0315548_12604881	3300031551	Salt Marsh Sediment	MSDITDEKSHFQGAQKHTDFKVTLXLHFVTTNVNLAYI
Ga0307379_100720393	3300031565	Soil	MSIRENCKMSEFFEKSLLSGAGKHPDFQVTLCLHFVTTNVDFAYIKSE
Ga0315539_10107641	3300031650	Salt Marsh Sediment	MPEFIEKSPLLEAEKHPDFQVTSCHRFVSTNVDFAYIESE
Ga0316193_115159221	3300033429	Sediment	LPTSCKMPEAFEVSPLSEAKKHPDFQVTPCYQNDTTKLNFAYIES

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters