Metagenome / Metatranscriptome Family F094585

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F094585
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	79 residues
Representative Sequence	MGSSRSISSHCDPKTLAAIDLAFDGAWNVLQTRDLLARFTNDSELQAELSQRLVVLASDGVTDAEELRRQALASFPLA
Number of Associated Samples	100
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.87 %
% of genes near scaffold ends (potentially truncated)	33.02 %
% of genes from short scaffolds (< 2000 bps)	89.62 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (96.226 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (12.264 % of family members)
Environment Ontology (ENVO)	Unclassified (30.189 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (28.302 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.11% β-sheet: 0.00% Coil/Unstructured: 51.89%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF11752	DUF3309	13.21
PF09361	Phasin_2	5.66
PF05532	CsbD	3.77
PF04389	Peptidase_M28	3.77
PF00487	FA_desaturase	1.89
PF07369	DUF1488	1.89
PF07883	Cupin_2	0.94
PF06620	DUF1150	0.94
PF03330	DPBB_1	0.94
PF10011	DUF2254	0.94
PF06289	FlbD	0.94
PF03631	Virul_fac_BrkB	0.94
PF09351	DUF1993	0.94
PF08534	Redoxin	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	3.77
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	1.89
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	1.89
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.94
COG1582	Swarming motility protein SwrD	Cell motility [N]	0.94
COG5568	Uncharacterized conserved protein, DUF1150 family	Function unknown [S]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.23 %
Unclassified	root	N/A	3.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.23 %
Unclassified	root	N/A	3.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.23 %
Unclassified	root	N/A	3.77 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	93.40 %
Unclassified	root	N/A	3.77 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	91.51 %
Unclassified	root	N/A	3.77 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.89 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	87.74 %
Unclassified	root	N/A	3.77 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.94 %

Name	Rank	Taxonomy	Distribution
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	70.75 %
Unclassified	root	N/A	3.77 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.83 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	1.89 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.94 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	70.75 %
Unclassified	root	N/A	3.77 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	2.83 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	1.89 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.94 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	70.75 %
Unclassified	root	N/A	3.77 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	2.83 %
Telmatocola	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola	1.89 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.94 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	70.75 %
Unclassified	root	N/A	3.77 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	2.83 %
Telmatocola sphagniphila	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	1.89 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.94 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10000243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	41075	Open in IMG/M
3300000878\|AL9A1W_1053183	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	2933	Open in IMG/M
3300001359\|A3035W6_1081467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1864	Open in IMG/M
3300002120\|C687J26616_10089148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1004	Open in IMG/M
3300002407\|C687J29651_10092235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1022	Open in IMG/M
3300004058\|Ga0055498_10060727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	691	Open in IMG/M
3300004092\|Ga0062389_101394028	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300005093\|Ga0062594_100685400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	921	Open in IMG/M
3300005205\|Ga0068999_10115455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	546	Open in IMG/M
3300005340\|Ga0070689_100549591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	995	Open in IMG/M
3300005434\|Ga0070709_11649383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	523	Open in IMG/M
3300005843\|Ga0068860_100529546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1179	Open in IMG/M
3300005844\|Ga0068862_101902572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	605	Open in IMG/M
3300006047\|Ga0075024_100352697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	736	Open in IMG/M
3300006047\|Ga0075024_100604113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	590	Open in IMG/M
3300006050\|Ga0075028_100169572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1163	Open in IMG/M
3300006052\|Ga0075029_101286676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	513	Open in IMG/M
3300006057\|Ga0075026_100156238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1174	Open in IMG/M
3300006059\|Ga0075017_100074285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2327	Open in IMG/M
3300006102\|Ga0075015_100065471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1757	Open in IMG/M
3300006172\|Ga0075018_10057498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1637	Open in IMG/M
3300006174\|Ga0075014_100076229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1510	Open in IMG/M
3300006354\|Ga0075021_10072058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2022	Open in IMG/M
3300009148\|Ga0105243_12805062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	528	Open in IMG/M
3300009157\|Ga0105092_10220342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1062	Open in IMG/M
3300009166\|Ga0105100_10784257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	590	Open in IMG/M
3300009523\|Ga0116221_1139943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1057	Open in IMG/M
3300009524\|Ga0116225_1207231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	885	Open in IMG/M
3300009811\|Ga0105084_1032166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	898	Open in IMG/M
3300009824\|Ga0116219_10352141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	825	Open in IMG/M
3300009837\|Ga0105058_1180388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	522	Open in IMG/M
3300009839\|Ga0116223_10355152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	868	Open in IMG/M
3300010371\|Ga0134125_10284390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1837	Open in IMG/M
3300010379\|Ga0136449_100395992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2454	Open in IMG/M
3300010396\|Ga0134126_10356375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1706	Open in IMG/M
3300010399\|Ga0134127_10531402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1193	Open in IMG/M
3300010401\|Ga0134121_11049710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	803	Open in IMG/M
3300012010\|Ga0120118_1047270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1093	Open in IMG/M
3300012157\|Ga0137353_1100456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	539	Open in IMG/M
3300012958\|Ga0164299_10176167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1211	Open in IMG/M
3300012984\|Ga0164309_10134647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1619	Open in IMG/M
3300012986\|Ga0164304_11682149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	530	Open in IMG/M
3300012987\|Ga0164307_10125004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1654	Open in IMG/M
3300013296\|Ga0157374_12282922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	568	Open in IMG/M
3300013306\|Ga0163162_11559531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	753	Open in IMG/M
3300013501\|Ga0120154_1004835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4107	Open in IMG/M
3300013764\|Ga0120111_1012161	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	2603	Open in IMG/M
3300014308\|Ga0075354_1024028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	995	Open in IMG/M
3300014321\|Ga0075353_1135217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	609	Open in IMG/M
3300014324\|Ga0075352_1181610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	611	Open in IMG/M
3300014326\|Ga0157380_13293840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	516	Open in IMG/M
3300015372\|Ga0132256_100628566	Not Available	1188	Open in IMG/M
3300017792\|Ga0163161_11832201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	540	Open in IMG/M
3300017822\|Ga0187802_10037415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1745	Open in IMG/M
3300017924\|Ga0187820_1025155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1519	Open in IMG/M
3300017928\|Ga0187806_1087737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	982	Open in IMG/M
3300017932\|Ga0187814_10248770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	674	Open in IMG/M
3300017934\|Ga0187803_10130375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	988	Open in IMG/M
3300017943\|Ga0187819_10082137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1923	Open in IMG/M
3300017955\|Ga0187817_10244822	Not Available	1142	Open in IMG/M
3300017955\|Ga0187817_10586288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	711	Open in IMG/M
3300017994\|Ga0187822_10033779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1375	Open in IMG/M
3300018007\|Ga0187805_10391141	Not Available	645	Open in IMG/M
3300018012\|Ga0187810_10147885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	942	Open in IMG/M
3300018022\|Ga0187864_10345077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	653	Open in IMG/M
3300018022\|Ga0187864_10438831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	556	Open in IMG/M
3300018084\|Ga0184629_10679774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	519	Open in IMG/M
3300018476\|Ga0190274_13757551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	513	Open in IMG/M
3300025167\|Ga0209642_10351988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	831	Open in IMG/M
3300025313\|Ga0209431_10119054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2083	Open in IMG/M
3300025313\|Ga0209431_10910554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	630	Open in IMG/M
3300025900\|Ga0207710_10616383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	567	Open in IMG/M
3300025949\|Ga0207667_10755927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	971	Open in IMG/M
3300025957\|Ga0210089_1055298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	513	Open in IMG/M
3300025972\|Ga0207668_10637366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	932	Open in IMG/M
3300025972\|Ga0207668_10874169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	799	Open in IMG/M
3300026041\|Ga0207639_10865750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	844	Open in IMG/M
3300027497\|Ga0208199_1079475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	685	Open in IMG/M
3300027568\|Ga0208042_1157332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	569	Open in IMG/M
3300027625\|Ga0208044_1157908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	626	Open in IMG/M
3300027638\|Ga0208612_1137132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	610	Open in IMG/M
3300027641\|Ga0208827_1097051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	883	Open in IMG/M
3300027870\|Ga0209023_10863799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	504	Open in IMG/M
3300027915\|Ga0209069_10485213	Not Available	693	Open in IMG/M
3300028380\|Ga0268265_11374793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	708	Open in IMG/M
3300028809\|Ga0247824_10263524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	960	Open in IMG/M
3300030659\|Ga0316363_10201872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	828	Open in IMG/M
3300031094\|Ga0308199_1118265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	601	Open in IMG/M
3300031170\|Ga0307498_10047101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1149	Open in IMG/M
3300031274\|Ga0307442_1053152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1267	Open in IMG/M
3300031277\|Ga0307425_1009015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4674	Open in IMG/M
3300031359\|Ga0307426_1161080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	786	Open in IMG/M
3300031360\|Ga0307444_1020916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2341	Open in IMG/M
3300031368\|Ga0307429_1166995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	579	Open in IMG/M
3300031537\|Ga0307419_10072235	All Organisms → cellular organisms → Bacteria → Proteobacteria	1399	Open in IMG/M
3300031620\|Ga0315552_1156768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	722	Open in IMG/M
3300031720\|Ga0307469_11902998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	576	Open in IMG/M
3300031740\|Ga0307468_101641955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	602	Open in IMG/M
3300031834\|Ga0315290_11140139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	650	Open in IMG/M
3300031949\|Ga0214473_11665922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	636	Open in IMG/M
3300032160\|Ga0311301_10299563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2577	Open in IMG/M
3300032160\|Ga0311301_11299356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	920	Open in IMG/M
3300032180\|Ga0307471_102321911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	677	Open in IMG/M
3300033433\|Ga0326726_11731915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	609	Open in IMG/M
3300033551\|Ga0247830_11206313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	604	Open in IMG/M
3300034090\|Ga0326723_0241677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	804	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.79%
Host-Associated	Host-Associated	13.21%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	47.17%
Aquatic	Environmental → Aquatic	39.62%
Plants	Host-Associated → Plants	13.21%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.28%
Freshwater	Environmental → Aquatic → Freshwater	17.92%
Sediment	Environmental → Aquatic → Sediment	12.26%
Marine	Environmental → Aquatic → Marine	9.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.60%
Peat	Environmental → Terrestrial → Peat	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.26%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.60%
Loam	Environmental → Terrestrial → Soil → Loam	6.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.77%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.83%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.89%
Sand	Environmental → Terrestrial → Soil → Sand	1.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.89%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.94%
Lake	Environmental → Aquatic → Freshwater → Lake	0.94%
Ice	Environmental → Aquatic → Freshwater → Ice	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.26%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	10.38%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	6.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.60%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.72%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	4.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.83%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.83%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.89%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.94%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.94%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.94%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	12.26%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	10.38%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	10.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.60%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	5.66%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.72%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	4.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.77%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.83%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.89%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.89%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.89%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.94%
Polar Desert	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert	0.94%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	0.94%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.94%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300000878	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-5 cm-9A)- 1 week illumina	Environmental	Open in IMG/M
3300001359	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-35cm)- 6 month illumina	Environmental	Open in IMG/M
3300002120	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2	Environmental	Open in IMG/M
3300002407	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005205	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012157	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT760_2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025957	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1 (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027638	Polar desert microbial communities from Antarctic Dry Valleys - UQ889 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031274	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-30	Environmental	Open in IMG/M
3300031277	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-30	Environmental	Open in IMG/M
3300031359	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-40	Environmental	Open in IMG/M
3300031360	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1603-40	Environmental	Open in IMG/M
3300031368	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-230	Environmental	Open in IMG/M
3300031537	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-30	Environmental	Open in IMG/M
3300031620	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-70	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100002434	3300000567	Peatlands Soil	MGSSRSISSHCDPRTLASIDLAFDSAWGVLAVHDLFARFTNACELRGELSQRLTVLASDGVTDPDELRRLVLASFPLA*
AL9A1W_10531832	3300000878	Permafrost	ARLRGGRFSQFSRGSLTRSIASHCDPKTLAAIDLAFDWAWNVLETRDLLARFANYSELKAEINQRLVILASDGVTNPDELRRQVLATFPLAAARCQQ*
A3035W6_10814672	3300001359	Permafrost	LPHAEARLRGGRFSQFSRGSLTRSIASHCDPKTLAAIDLAFDWAWNVLETRDLLARFANYSELKAEINQRLVILASDGVTNPDELRRQVLATFPLAAARCQQ*
C687J26616_100891481	3300002120	Soil	MGSSRSISSHCDPKTLAAIDFAFDGAWNVLETRDLLARFTNDSELKAEINQRLVILASDGVTNPDELRRQVLASFPLA*
C687J29651_100922353	3300002407	Soil	EGAMGSSRSISSHCDPKTLAAIDFAFDGAWNVLETRDLLARFTNDSELKAEINQRLVILASDGVTNPDELRRQVLASFPLA*
Ga0055498_100607271	3300004058	Natural And Restored Wetlands	MGSFRSISNHCDPKTLAAIDLAFDGAWDVLATRALFARFANDRELQSELSQRLVILASDGVTDPDEPRRQVLSSFPLA*
Ga0062389_1013940282	3300004092	Bog Forest Soil	MGSPRSISSHCDPKTLAAIDLAFDGAWNVLQTRHLLARFTNDSELQAELSQRLVVIASDGVTDAEELRRQALASFPLA*
Ga0062594_1006854002	3300005093	Soil	MGSSRSISSHCDPKTLTAIDFAFDAAWNVLETRDLLARFTNDSELKAELSQRLVVLASDGVTDAEELRRQALASFPLA*
Ga0068999_101154551	3300005205	Natural And Restored Wetlands	MGSFRSISNHCDPKTLAAIDLAFDGAWDVLATRALFARFANDRELQSELSQRLVILASDGVTDPDELRRQVLSSFPLA*
Ga0070689_1005495912	3300005340	Switchgrass Rhizosphere	MGSSRSISSHCDPKTLTAIDLAFDGAWNVLETRDLLARFTNDSELKAELSQRLVVLASDGMTDAEELRRQALASFPLA*
Ga0070709_116493831	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MGSPRAISNHCDPKTLAAIDLAFDGAWDVLASRALLARFANDRELQSELSQRLVILASDGVTDPDEL
Ga0068860_1005295461	3300005843	Switchgrass Rhizosphere	MGSSRSISSHCDPKTLTAIDLAFDGAWNVLETRDLLARFTNDSELKAELSQRLVVLASDGVTDAEELRRQALASFPLA*
Ga0068862_1019025721	3300005844	Switchgrass Rhizosphere	MGSSRSISSHCDPKTLTAIDLAFDGAWNVLETRDLLARFTNDSELKAELSQRLVVLASDGMTDAQELRRQALASFPLA*
Ga0075024_1003526972	3300006047	Watersheds	MGSFRSISSHCDPRTLASIDLAFDSACGVLAVHDLLARFTNDCELRAELSQRLTVLASDGVTDPDELRRLVLASFPLA*
Ga0075024_1006041132	3300006047	Watersheds	MGSSRSISSHCDPKTITAIDLAFDAAWNVLETRDLLARFTNDSELKAELSQRLVVLASDGVTDAEELRRQALASFPLA*
Ga0075028_1001695723	3300006050	Watersheds	MGSFRSISSHCDPRTLASIDLAFDSACGVLVVRDLLARFTNDCELQAELSQRLTVLASDGVTDPDELRRLVLASFPLA*
Ga0075029_1012866761	3300006052	Watersheds	MGSSRSISSHCDPKTLAAIDLAFDGAWSVLEKRDLLARFANDCELQEELGQRLVVLASDGVTDPEELRRQALASFP
Ga0075026_1001562382	3300006057	Watersheds	MGSSRSISSHCDPRTLASIDLAFDSACGVLAVRDLLARFTNDCELQAELSQRLTVLASDGVTDPDELQRLVLASFPLA*
Ga0075017_1000742853	3300006059	Watersheds	MGSSRSISSHCDPKTLAAIDLAFDGAWSVLQKRDLLARFANDCGLQEELGQRLVVLASDGVTDPEELRRQALASFPLADGRAIRSW*
Ga0075015_1000654714	3300006102	Watersheds	MGSSRSISSHCDPRTLASIDLAFDSACGVLAVHDLLARFTNDCELRAEVSQRLTVLASDGVTDPDELQRLVLASFPMA*
Ga0075018_100574983	3300006172	Watersheds	MGSSRSISSHCDPRTLASIDLAFDSACGVLAVHDLLGRFTNDCELRAELSQRLTVLASDGVTDPDELRRLVLASFPLA*
Ga0075014_1000762293	3300006174	Watersheds	MGSSRSISSHCDPKTLAAIDLAFDGAWSVLQKRDLLARFANDCELQEELGQRLVVLASDGVTDPEELRRQALASFPLADGRAIRSW*
Ga0075021_100720581	3300006354	Watersheds	MGSSRSISSHCDPRTLASIDVAFDSACGVLAVHDLLGRFTNDCELRAELSQRLTVLASDGVTDPDELRGLVLASFPLA*
Ga0105243_128050622	3300009148	Miscanthus Rhizosphere	LPPATMRRESMGSSRSISSHCDPKTLTAIDLAFDGAWNVLETRDLLARFTNDSELKAELSQRLVVLASDGVTDAEELRRQALASFPLA*
Ga0105092_102203421	3300009157	Freshwater Sediment	MGSSRSISSHCDPRTLTAIDLAFDGASKVLEARDLLARFMNDSELKAELSQRLVVLASDGVTDAEELRRQALASFPLA*
Ga0105100_107842572	3300009166	Freshwater Sediment	MGSSRSISSHCDPKTLASIDLAFDRAWSVLETRDLLVRFTNDSELKAEINQRLVILASDGVTNSDELRRQVI
Ga0116221_11399432	3300009523	Peatlands Soil	MGSSRSISSHCDPKTLAAIDLAFDDAWSVLEALNLLAGFTNDCELQAELSQRLVALASDGMTNPNELRQQVLASFPLGLRSDQSVK*
Ga0116225_12072312	3300009524	Peatlands Soil	SRSISSHCDPKTLAAIDLAFDDAWSVLEALNLLAGFTNDCELQAELSQRLVALASDGMTDPNELRQQVLASFPLGLRSDQSVK*
Ga0105084_10321661	3300009811	Groundwater Sand	MGSSRSISSHCDPKTLAAIDLAFDGAWNVLETRDLLARFTNDSELKAEINQRLVILASDGVTNPDELRRQVLASFLSAPFCRGPRLRAR
Ga0116219_103521411	3300009824	Peatlands Soil	MEGAMGSSRSISSHCDPKTLAAIDLAFDDAWSVLEALNLLAGFTNDCELQAELSQRLVALASDGMTDPNELRQQVLASFPLGLRSDQSVK*
Ga0105058_11803881	3300009837	Groundwater Sand	VGSSRSISSHCDPKTLAAIDLAFDGAWNVLETRDLLARFTNDSELKAEINQRLVILASDGVTNPDELRRQVLASFPLA*
Ga0116223_103551521	3300009839	Peatlands Soil	MEGAMGSSRSISSHCDPKTLAAIDLAFDDAWSVLEALNLLAGFTNDCELQAELSQRLVALASDGMTDPNELRQQVLASFPLGLRSDQSVK
Ga0134125_102843902	3300010371	Terrestrial Soil	MGSSRSISSHCDPKTLVAIDLAFDGAWDVLEARELLARFASDCELQAELGQRLAVLASDGVIDPDELRRQVLASFPLA*
Ga0136449_1003959923	3300010379	Peatlands Soil	MGSSRSISSHCDPKTLAAIDLAFDDAWSVLEALNLLAGFTNDCELQAELSQRLVALASDGMTDPNELRQQVLASFPLGLRSDQSVK*
Ga0134126_103563754	3300010396	Terrestrial Soil	MGSPRAISNHCDPKTLAAIDLAFDGAWDVLASRALLARFANDRELQSELSQRLVILASDGVTDPDELRRQVLSSFPLA*
Ga0134127_105314023	3300010399	Terrestrial Soil	CDPKTLVAIDLAFDGAWDVLEARELLARFASDCELQAELGQRLAVLASDGVIDPDELRRQVLASFPLA*
Ga0134121_110497101	3300010401	Terrestrial Soil	KRAEGVMGSSRSISSHCDPKTLVAIDLAFDGAWDVLEARELLARFASDCELQAELGQRLAVLASDGVIDPDELRRQVLASFPLA*
Ga0120118_10472701	3300012010	Permafrost	RFSQFSRGSLTRSIASHCDPKTLAAIDLAFDWAWNVLETRGLLARFANYSELKAEINQRLVILASDGVTNPDELRRQVLATFPLAAARCQQ*
Ga0137353_11004563	3300012157	Soil	MGSSRSISSHCDAKTLASIDLAFDRAWSVLETRDLLARFSNDSELKAEINQRLVILASDGVTNSDELRCQVLASFPLA*
Ga0164299_101761672	3300012958	Soil	MGSSRSISSHCDPKTLTAIDLAFDGAWNVLETRDLLARFTNDSELKAELSQRLVVLASDGVTDAEELRRQALASFPLPKWRRASMFG*
Ga0164309_101346472	3300012984	Soil	MGSSRSISSHYDPKTLVAIDRAFDGAWDVLETRELLARFASDCELQAELSQRLAVLASDGVIDPDELRRQVLASFPLA*
Ga0164304_116821491	3300012986	Soil	MGSSRSISSHCDPKTLTAIDLAFDGAWNVLETRDLLARFTNDSELKAELSQRLVVLASDGVTDAEELRRQALASFPLPKW
Ga0164307_101250042	3300012987	Soil	MGSSRSISSHCDPKTLTAIDFAFDAAWNVLETRDLLARFTNDSELKAELSQRLVVLASDGMTDAEELRRQALASFPLA*
Ga0157374_122829222	3300013296	Miscanthus Rhizosphere	MGSSRSISSHCDPKTLVAIDLAFDGAWDVLETRELLARFANDCELQAELGQRLAVLASDGVIDPDELRRQVLASFPLA*
Ga0163162_115595311	3300013306	Switchgrass Rhizosphere	MGSSRSISSHCDPKTLVAIDLAFDGAWDVLETRDLLARFANDRELQAELSQRLAVLASDGVIDPDELRRQVLASFPLA*
Ga0120154_10048353	3300013501	Permafrost	RFSQFSRGSLTRSIASHCDLKTLAAIDLAFDWAWNVLETRDLLARFANYSELKAEINQRLVILASDGVTNPDELRRQVLATFPLAAARCQQ*
Ga0120111_10121612	3300013764	Permafrost	LRGGRFSQFSRGSLTRSIASHCDPKTLAAIDLAFDGAWNVLETRDLLARFANYSELKAEINQRLVILASDGVTNPDELRRQVLATFPLAAARCQQ*
Ga0075354_10240281	3300014308	Natural And Restored Wetlands	MGSFRSISNHCDPKTLAAIDLAFDGAWDVLATRALLARFANDRELQSELSQRLVILASDGVTDPDELRRQVLSSFPLA*
Ga0075353_11352171	3300014321	Natural And Restored Wetlands	TLAAIDLAFDGAWDVLATRALFARFANDRELQSELSQRLVILASDGVTDPDELRRQVLSSFPLA*
Ga0075352_11816101	3300014324	Natural And Restored Wetlands	MGSSRSISNHCDPKTLAAIDLAFDGAWDVLATRALFARFANDRELQSELSQRLVILASDGVTDPDELRRQVLSSFPLA*
Ga0157380_132938401	3300014326	Switchgrass Rhizosphere	MGSSRSISSHCDPKTLVAIDLAFDGAWDVLEARELLARFASDCELQAELGQRLAVLASDGVIDPDEQRRQVLASFPLA*
Ga0132256_1006285661	3300015372	Arabidopsis Rhizosphere	MGSSRSISSHCDPKTLVAIDLAFDGAWDVLETRDLLARFANDCELQAELSQRLAVLASDGVIDSDELRRQVLASFPLA*
Ga0163161_118322011	3300017792	Switchgrass Rhizosphere	MGSSRSISSHCDPKTLVAIDLAFDGAWDVLEARELLARFASDCELQAELGQRLAVLASDGVIDPDELRRQVLASFPLA
Ga0187802_100374152	3300017822	Freshwater Sediment	MGSSRSISSHCDPKTLAAIDLAFEGAWNVLETRDLLARFANDCELQAELSQRLVVLASDGMSDPDELRRQVLASFPLA
Ga0187820_10251552	3300017924	Freshwater Sediment	MGSSRSISSHCDPKTLAAIDLAFEGAWNVLETRDLLARFANDCELQTELSQRLVVLASDGMSDPDELRRQVLASFPLA
Ga0187806_10877371	3300017928	Freshwater Sediment	MGSSRSISSHCDPKTLAAIDLAFEGAWNVLETRDLLARFANDCELQTELSQRLVVLASDGMTDPEELRRQVLASFPLA
Ga0187814_102487701	3300017932	Freshwater Sediment	MGSSRSISSHCDPKTLAAIDLAFEGAWNVLETRDLLARFANDCELQTELSQRLVVLASDGMSDPDELRRQVLAKLPRWLKWHGI
Ga0187803_101303751	3300017934	Freshwater Sediment	PAKAEGAMGSSRSISSHCDPKTLAAIDLAFEGAWNVLETRDLLARFANDCELQTELSQRLVVLASDGMSDPDELRRQVLASFPLA
Ga0187819_100821373	3300017943	Freshwater Sediment	MGSSRSISSHCDPKTLAAIDLAFEGAWNVLETRHLLARFTNDSELQAELSQRLVVLASDGVTDAEELRRQALA
Ga0187817_102448221	3300017955	Freshwater Sediment	MGSSRSISSHCDPKTLAAVDLAFDGAWNVLETRDLLARFANDCELQEELGQRLMVLASDGMTDPEELRRQVLASFPLA
Ga0187817_105862881	3300017955	Freshwater Sediment	MGSSRSISSHCDPKTLAAIDLAFEGAWNVLETRDLLARFTNDSELQAELSQRLVVLASDGVTDAEELRRQALASFPLA
Ga0187822_100337792	3300017994	Freshwater Sediment	MGSSRSISSHCDPKTLAAIDLAFEGAWNVLETRDLLARFANDCELQAELSQRLMVLASDGMTDPDELRRQVLASFPLA
Ga0187805_103911411	3300018007	Freshwater Sediment	GYPPVDPKTLAAIDHAFEGAWSVLATRHLLARFANEYELQEELSQRLAVLASNGVTDPEELRQQALASFPLS
Ga0187810_101478852	3300018012	Freshwater Sediment	MGSSRSISSHCDPKTLAAIDLAFDGAWNVLQTRDLLARFTNDSELQAELSQRLVVLASDGVTDAEELRRQALASFPLA
Ga0187864_103450771	3300018022	Peatland	MGSSRSISSHCDPKTLAAIDLAFDDAWSVLETRNLLAGFTNDCELQAELSQRLVALASDGMTDPNELRQQVLASFPLGLRSDQSVK
Ga0187864_104388312	3300018022	Peatland	MGSSRSISSHCDPRTLASIDLAFDSAWGVIAVHDLFARFTNACELRGELSQRLTVLASDGVTDPDELRRLVLASFPLA
Ga0184629_106797741	3300018084	Groundwater Sediment	MGSSRSISSHCDPKTITAIDLAFDAAWNVLETRDLLARFTNDSELKAELSQRLVVLASDGVTDAEELRRQALASFPLA
Ga0190274_137575511	3300018476	Soil	MGSSRSISSHCDPRTLTAIDLAFDGAWNVLETRDLLARFTNDSELKAELSQRLVVLASDGVTDAEELRRQALASFPLA
Ga0209642_103519882	3300025167	Soil	MGSSRSISSHCDSKTLAAINLAFEGAWNVLETRELLARFANNCELQAELSQRLVVLASDGMTDPDKLRRQGLASFPLA
Ga0209431_101190543	3300025313	Soil	MGSSRSISSHCDPKTLAAIDFAFDGAWNVLETRDLLARFTNDSELKAEINQRLVILASDGVTNPDELRRQVLASFPLA
Ga0209431_109105541	3300025313	Soil	MGSSRSISSHCDPKTLAAIELAFDGAWDVLETRALLARFANDCELQAELSQRLVVLASDGMTDPDKLRRQGLASFPLA
Ga0207710_106163832	3300025900	Switchgrass Rhizosphere	MGSSRSISSHCDPKTLTAIDLAFDGAWNVLETRDLLARFTNDSELKAELSQRLVVLASDGMTDAEELRRQALASFPLA
Ga0207667_107559272	3300025949	Corn Rhizosphere	MGSSRSISSHCDPKTLTAIDLAFDGAWNVLETRDLLARFTNDSELKAELSQRLVVLASDGMTDAEELR
Ga0210089_10552981	3300025957	Natural And Restored Wetlands	MGSFRSISNHCDPKTLAAIDLAFDGAWDVLATRALFALFANDRELQSELSQRLVILASDGVTDPDEPRRQVLSSFPLA
Ga0207668_106373663	3300025972	Switchgrass Rhizosphere	MGSSRSISSHCDPKTLTAIDLAFDAAWNVLETRDLLARFTNDSELKAELSQRLVVLASDGVTDAEE
Ga0207668_108741692	3300025972	Switchgrass Rhizosphere	MGSSRSISSHCDPKTLVAIDLAFDGAWDVLETRDLLARFANDCELQAELSQRLTVLASDGVIDPDELRRQVLASFPLA
Ga0207639_108657501	3300026041	Corn Rhizosphere	CDPKTLTAIDLAFDGAWNVLETRDLLARFTNDSELKAELSQRLVVLASDGMTDAEELRRQALASFPLA
Ga0208199_10794752	3300027497	Peatlands Soil	MSSSRSISSHCDPRTLASIDLAFDSAWGVLAVHDLFARFTNACELRGELSQRLTVLASDGVTDPDELRRLVLASFPLA
Ga0208042_11573321	3300027568	Peatlands Soil	QTTEGAMGSSRSISSHCDPRTLASIDLAFDSAWGVLAVHDLFARFTNACELRGELSQRLTVLASDGVTDPDELRRLVLASFPLA
Ga0208044_11579082	3300027625	Peatlands Soil	ISSHCDPKTLAAIDLAFDDAWSVLEALNLLAGFTNDCELQAELSQRLVALASDGMTDPNELRQQVLASFPLGLRSDQSVK
Ga0208612_11371321	3300027638	Polar Desert	MSSRSISSQCDPKTLAAIDVAFDGVWSVLERRDLLARFASDSELEAELSQRLTVLASDGVTNPEELRRQALASFPLA
Ga0208827_10970511	3300027641	Peatlands Soil	MGSSRSISSHCDPRTLASIDLAFDSAWGVLAVHDLFARFTNACELRGELSQRLTVLASDGVTDPDELRRLVLASFPLA
Ga0209023_108637991	3300027870	Freshwater And Sediment	MGSSRSISSHCDPRTVAAIDLAFDGAWSALETRDLFARFANDGELQAEISQRLVVLASDGMTDPDELRRQVLASFPLA
Ga0209069_104852132	3300027915	Watersheds	MGSSRSISSHCDPTTLASIDLAFDSACGVLAVHDLLARFTNDCELRAELSQRLTVLASDGVTDPDELQ
Ga0268265_113747933	3300028380	Switchgrass Rhizosphere	SHCDPKTLTAIDLAFDGAWNVLETRDLLARFTNDSELKAELIQRLVVLASDGVTDAEELRRQALASFPLA
Ga0247824_102635242	3300028809	Soil	MGSSRSISSHCDPKTLTAIDLAFDAAWNVLETRDLLACFTNDSELKAELSQRLVVLASDGVTDAEELRRQALASFPLA
Ga0316363_102018722	3300030659	Peatlands Soil	MGSSRSISSHCDPKTLAAIDLAFDDAWSVLEALNLLAGFTNDCELQAELSQRLVALASDGMTDPNELRQQVLA
Ga0308199_11182652	3300031094	Soil	MGSSRSISSHCDPKTLVAIDLAFDGAWGVLETRDLLARFTNDRELQVELSQRLAFLASDGVIDPDELRRQVLASFPVA
Ga0307498_100471012	3300031170	Soil	MGSSRSISSHCDPKTLTAIDLAFDGAWNVLETRDLLARFTNDSELKAELSQRLVVLASDGVTDAEELRRQALASFPLA
Ga0307442_10531522	3300031274	Salt Marsh	MGSSRSISSHCDPKTLNAIDLAFNGAWNVLETRDLLARFANHSELKAELGQRLVVLASDGLTDAEELRRQVLASFPLA
Ga0307425_10090158	3300031277	Salt Marsh	TLAAIDVAFDGVWSVLDRSDLLARFPSDSELEAELNQRLTVLASDGVTDPEELRCQALASFPLA
Ga0307426_11610802	3300031359	Salt Marsh	VHSQYSNTKTLAAIDVAFDGVWSVLDRSDLLARFPSDSELEAELNQRLTVLASDGVTDPEELRCQALASFPLA
Ga0307444_10209162	3300031360	Salt Marsh	MASSRSISSHCDPKTLAAIDLAFDGAWNVLATHALLARFANDRELQSELSQRLVILASDGITDPDDLRRQVLASFPLA
Ga0307429_11669951	3300031368	Salt Marsh	VHSQYSNTKTLAAIDVAFDGVWSVLDRRDLLARFPSDSELEAELNQRLTVLASDGVTDPEELRRQALASFPLA
Ga0307419_100722354	3300031537	Salt Marsh	AMGSSRSISSHCDPKTLNAIDLAFNGAWNVLETRDLLARFANHSELKAELGQRLVVLASDGLTDAEELRRQVLASFPLA
Ga0315552_11567681	3300031620	Salt Marsh Sediment	ALACKRVEGAMASSRSISSHCDPKTLAAIDLAFDGAWNVLATHALLARFANDRELQSELSQRLVILASDGITDPDDLRRQVLASFPLA
Ga0307469_119029981	3300031720	Hardwood Forest Soil	VGSSRSISSHCDPKTLVAIDLAFDGAWDVLETRDLLARFANDCELQAELSQRLTVLASDGVIDPDELRRQVLASFPLA
Ga0307468_1016419552	3300031740	Hardwood Forest Soil	MGSSRSISSHCDPKTLVAIDLAFDGAWDVLETRDLLARFANDRELQAELSQRLAVLASDGVIDPDELRRQVLASFPLA
Ga0315290_111401391	3300031834	Sediment	VLCAPACKRAEAAMGSSRSISSHCDPRTVAAIDLAFDGAWSALETRDLFARFANDGELQAEISQRLVVLASDGMTDPDELRRQVLASFPLA
Ga0214473_116659222	3300031949	Soil	MGSSRSISSHCDSKTLAAINLAFEGAWNVLETRELLARFANNCELQAELSQRLVVLASDGMTDADELRRQVLASFPLA
Ga0311301_102995633	3300032160	Peatlands Soil	MGSSRSISSHCDPKTLAAIDLAFDDAWSVLEALNLLAGFTNDCELQAELSQRLVALASDGMTDPNELRQQVLASFPLGLRSDQSVK
Ga0311301_112993561	3300032160	Peatlands Soil	MGSSRSISSHCDPKTLAAIDLAFDGAWSVLQKRDLLARFANDCELQEELGQRLVVLASDGVTDPGELRRQALASFHLA
Ga0307471_1023219112	3300032180	Hardwood Forest Soil	KSNNGHRVAESGRLPPATMRRESMGSSRSISSHCDPKTLTAIDLAFDGAWNVLETRDLLARFTNDSELKAELSQRLVVLASDGVTDAEELRRQALASFPLA
Ga0326726_117319151	3300033433	Peat Soil	MGSSRSISSHCDPKTLVAIDLAFDGAWDVLEARELLARFASDCELQAELSQRLAVLASDGVIDPDELRRQVLASFPLA
Ga0247830_112063131	3300033551	Soil	MGSSRSISSHCDPKTLVAIDLAFDGAWDVLETRDLLARFANDCELEAELSQRLAVLASDGVIDPDEL
Ga0326723_0241677_361_597	3300034090	Peat Soil	MGSSRSISSHCDPKTLVAIDLAFDGAWDVLEARELLARFASDCELQAELSQRLAVLASDGVIDPEELRRQVLASFPLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094585

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences