Metagenome / Metatranscriptome Family F094583

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094583
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	69 residues
Representative Sequence	STLKRWVNVKRVALKANTTGVAPTVISSATFRSGLRAKLRVRVVLGQAQVGTCYLAGRSNTIRS
Number of Associated Samples	93
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.97 %
% of genes near scaffold ends (potentially truncated)	95.28 %
% of genes from short scaffolds (< 2000 bps)	86.79 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.075 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost (11.321 % of family members)
Environment Ontology (ENVO)	Unclassified (18.868 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.264 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.61% β-sheet: 21.74% Coil/Unstructured: 70.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF04185	Phosphoesterase	8.49
PF00171	Aldedh	5.66
PF00571	CBS	2.83
PF13549	ATP-grasp_5	1.89
PF12728	HTH_17	1.89
PF01894	UPF0047	1.89
PF10041	DUF2277	0.94
PF09285	Elong-fact-P_C	0.94
PF01987	AIM24	0.94
PF07690	MFS_1	0.94
PF00694	Aconitase_C	0.94
PF04828	GFA	0.94
PF13671	AAA_33	0.94
PF13400	Tad	0.94
PF04140	ICMT	0.94
PF13302	Acetyltransf_3	0.94
PF06831	H2TH	0.94
PF00027	cNMP_binding	0.94
PF05977	MFS_3	0.94
PF09852	DUF2079	0.94
PF08666	SAF	0.94
PF09678	Caa3_CtaG	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	8.49
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	5.66
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	5.66
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	5.66
COG0432	Thiamin phosphate synthase YjbQ, UPF0047 family	Coenzyme transport and metabolism [H]	1.89
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	0.94
COG2013	AIM24 protein, required for mitochondrial respiration	Energy production and conversion [C]	0.94
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.94
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.08 %
Unclassified	root	N/A	17.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.08 %
Unclassified	root	N/A	17.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.08 %
Unclassified	root	N/A	17.92 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	55.66 %
Unclassified	root	N/A	17.92 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	28.30 %
Unclassified	root	N/A	17.92 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.04 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.94 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.92 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	15.09 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.94 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	0.94 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.09 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.94 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.94 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.09 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.94 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.94 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001361\|A30PFW6_1009920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1466	Open in IMG/M
3300001535\|A3PFW1_10460932	Not Available	511	Open in IMG/M
3300001535\|A3PFW1_10779869	All Organisms → cellular organisms → Bacteria → Terrabacteria group	503	Open in IMG/M
3300002547\|JGI24973J35851_1015176	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1111	Open in IMG/M
3300002547\|JGI24973J35851_1050633	All Organisms → cellular organisms → Bacteria → Terrabacteria group	539	Open in IMG/M
3300004081\|Ga0063454_101698476	All Organisms → cellular organisms → Bacteria → Terrabacteria group	549	Open in IMG/M
3300004153\|Ga0063455_101287735	All Organisms → cellular organisms → Bacteria → Terrabacteria group	556	Open in IMG/M
3300005175\|Ga0066673_10486384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	727	Open in IMG/M
3300005176\|Ga0066679_10884957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300005184\|Ga0066671_11059227	All Organisms → cellular organisms → Bacteria → Terrabacteria group	508	Open in IMG/M
3300005332\|Ga0066388_106393643	Not Available	594	Open in IMG/M
3300005339\|Ga0070660_101752456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300005340\|Ga0070689_100953925	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300005436\|Ga0070713_100356842	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300005445\|Ga0070708_101088028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	749	Open in IMG/M
3300005535\|Ga0070684_101189967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	717	Open in IMG/M
3300005548\|Ga0070665_101592791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300005558\|Ga0066698_10792807	All Organisms → cellular organisms → Bacteria → Terrabacteria group	614	Open in IMG/M
3300005560\|Ga0066670_10671905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	628	Open in IMG/M
3300005764\|Ga0066903_100431966	Not Available	2188	Open in IMG/M
3300005764\|Ga0066903_102702705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	963	Open in IMG/M
3300005764\|Ga0066903_104865117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	714	Open in IMG/M
3300005842\|Ga0068858_100962078	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300006028\|Ga0070717_12076344	Not Available	511	Open in IMG/M
3300006032\|Ga0066696_10410021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	885	Open in IMG/M
3300006791\|Ga0066653_10593043	Not Available	562	Open in IMG/M
3300006797\|Ga0066659_10854875	All Organisms → cellular organisms → Bacteria → Proteobacteria	757	Open in IMG/M
3300006804\|Ga0079221_10562903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	758	Open in IMG/M
3300006806\|Ga0079220_10091675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1553	Open in IMG/M
3300009148\|Ga0105243_13124575	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300009177\|Ga0105248_11846127	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300009551\|Ga0105238_11805746	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300010335\|Ga0134063_10192884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	957	Open in IMG/M
3300010361\|Ga0126378_12855029	Not Available	551	Open in IMG/M
3300010364\|Ga0134066_10189925	Not Available	674	Open in IMG/M
3300010366\|Ga0126379_12268510	Not Available	643	Open in IMG/M
3300010375\|Ga0105239_12246605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300010376\|Ga0126381_101340131	Not Available	1034	Open in IMG/M
3300010376\|Ga0126381_101505371	Not Available	972	Open in IMG/M
3300011997\|Ga0120162_1106586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300012010\|Ga0120118_1054619	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1001	Open in IMG/M
3300012014\|Ga0120159_1214828	All Organisms → cellular organisms → Bacteria → Terrabacteria group	508	Open in IMG/M
3300012019\|Ga0120139_1162574	All Organisms → cellular organisms → Bacteria → Terrabacteria group	585	Open in IMG/M
3300012045\|Ga0136623_10052766	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1774	Open in IMG/M
3300012185\|Ga0136619_10389065	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300012186\|Ga0136620_10171867	All Organisms → cellular organisms → Bacteria → Terrabacteria group	972	Open in IMG/M
3300012186\|Ga0136620_10264499	All Organisms → cellular organisms → Bacteria → Terrabacteria group	750	Open in IMG/M
3300012186\|Ga0136620_10318982	All Organisms → cellular organisms → Bacteria → Terrabacteria group	671	Open in IMG/M
3300012210\|Ga0137378_10379834	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300012211\|Ga0137377_11240275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
3300012212\|Ga0150985_104658854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300012212\|Ga0150985_104925114	Not Available	622	Open in IMG/M
3300012353\|Ga0137367_10095867	All Organisms → cellular organisms → Bacteria	2189	Open in IMG/M
3300012360\|Ga0137375_10298554	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300012469\|Ga0150984_100327381	All Organisms → cellular organisms → Bacteria → Terrabacteria group	532	Open in IMG/M
3300012527\|Ga0136633_1108147	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1112	Open in IMG/M
3300012530\|Ga0136635_10012260	Not Available	2566	Open in IMG/M
3300012669\|Ga0136626_105725	All Organisms → cellular organisms → Bacteria → Terrabacteria group	645	Open in IMG/M
3300012680\|Ga0136612_10018294	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3485	Open in IMG/M
3300012684\|Ga0136614_11084132	All Organisms → cellular organisms → Bacteria → Terrabacteria group	549	Open in IMG/M
3300012902\|Ga0157291_10241159	All Organisms → cellular organisms → Bacteria → Terrabacteria group	596	Open in IMG/M
3300012911\|Ga0157301_10388401	All Organisms → cellular organisms → Bacteria → Terrabacteria group	537	Open in IMG/M
3300012957\|Ga0164303_11091312	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300012958\|Ga0164299_11697865	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300012989\|Ga0164305_11082824	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300012989\|Ga0164305_11728970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300013105\|Ga0157369_10427280	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300013307\|Ga0157372_10303453	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300013758\|Ga0120147_1050371	All Organisms → cellular organisms → Bacteria → Terrabacteria group	730	Open in IMG/M
3300013764\|Ga0120111_1146181	All Organisms → cellular organisms → Bacteria → Terrabacteria group	542	Open in IMG/M
3300013768\|Ga0120155_1019927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2219	Open in IMG/M
3300013772\|Ga0120158_10075097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2158	Open in IMG/M
3300013772\|Ga0120158_10234057	All Organisms → cellular organisms → Bacteria → Terrabacteria group	931	Open in IMG/M
3300014157\|Ga0134078_10269834	Not Available	721	Open in IMG/M
3300014497\|Ga0182008_10710353	All Organisms → cellular organisms → Bacteria → Terrabacteria group	575	Open in IMG/M
3300015077\|Ga0173483_10172418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	974	Open in IMG/M
3300015189\|Ga0167667_1011115	All Organisms → cellular organisms → Bacteria	2691	Open in IMG/M
3300015374\|Ga0132255_102320635	All Organisms → cellular organisms → Bacteria → Terrabacteria group	819	Open in IMG/M
3300017695\|Ga0180121_10007660	All Organisms → cellular organisms → Bacteria	4058	Open in IMG/M
3300017695\|Ga0180121_10131388	All Organisms → cellular organisms → Bacteria → Terrabacteria group	910	Open in IMG/M
3300017936\|Ga0187821_10112926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1008	Open in IMG/M
3300018431\|Ga0066655_11263492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300018468\|Ga0066662_10348193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1273	Open in IMG/M
3300021344\|Ga0193719_10104566	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300021560\|Ga0126371_13007212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300024331\|Ga0247668_1010885	All Organisms → cellular organisms → Bacteria	1896	Open in IMG/M
3300025581\|Ga0208355_1061090	All Organisms → cellular organisms → Bacteria → Terrabacteria group	887	Open in IMG/M
3300025898\|Ga0207692_10053838	All Organisms → cellular organisms → Bacteria	2051	Open in IMG/M
3300025898\|Ga0207692_10858663	Not Available	596	Open in IMG/M
3300025919\|Ga0207657_11193480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300025924\|Ga0207694_11405460	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300025927\|Ga0207687_11694918	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300025929\|Ga0207664_10715978	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300025939\|Ga0207665_10987929	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300025949\|Ga0207667_11840370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300028755\|Ga0307316_10168554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	784	Open in IMG/M
3300028828\|Ga0307312_10797379	Not Available	626	Open in IMG/M
3300030785\|Ga0102757_11430590	All Organisms → cellular organisms → Bacteria → Terrabacteria group	628	Open in IMG/M
3300031231\|Ga0170824_105071436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	615	Open in IMG/M
3300031939\|Ga0308174_11590436	Not Available	561	Open in IMG/M
3300031996\|Ga0308176_10122398	All Organisms → cellular organisms → Bacteria	2332	Open in IMG/M
3300032017\|Ga0310899_10553025	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300032261\|Ga0306920_100113217	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4024	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.08%
Host-Associated	Host-Associated	17.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.92%
Plants	Host-Associated → Plants	17.92%
Aquatic	Environmental → Aquatic	14.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.92%
Freshwater	Environmental → Aquatic → Freshwater	14.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.83%
Loam	Environmental → Terrestrial → Soil → Loam	15.09%
Ice	Environmental → Aquatic → Freshwater → Ice	13.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.89%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.70%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	13.21%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	12.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.77%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.89%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.94%

Habitat	Taxonomy	Distribution
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	11.32%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	11.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.83%
Polar Desert	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.94%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.94%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.94%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001361	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-PF)- 6 month illumina	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300002547	Polar desert microbial communities from Antarctic Dry Valleys - UQ889	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011997	Permafrost microbial communities from Nunavut, Canada - A15_80cm_18M	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012185	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ353 (21.06)	Environmental	Open in IMG/M
3300012186	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012527	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012669	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ487 (21.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013758	Permafrost microbial communities from Nunavut, Canada - A24_65cm_12M	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015189	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb2a, glacial moraine)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030785	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A30PFW6_10099201	3300001361	Permafrost	FQRYSAALGRWVLVRRVVLRANASGVAPTVISSVRFRSSIRAHLRVRAVLGRTQVGSCYLAGRSNLIHS*
A3PFW1_104609322	3300001535	Permafrost	QRYNGTRWVAVKSVLLRANTTGVAPTVLSTATFRSAIKARLRVRVVLGTAQVGTCYLPGTSNTILS*
A3PFW1_107798692	3300001535	Permafrost	TRWVAVKSVLLRANTTGVAPTVVSTGTFRSAVKAGVRVRVVLGQAQVGTCYLPGTSNTILS*
JGI24973J35851_10151763	3300002547	Polar Desert	TLGRWVTVKRVLLRANSTGVAPTVISSVAFRSTIRPLLKVRVVLPQLQVGSCYRPGRSNVIRS*
JGI24973J35851_10506331	3300002547	Polar Desert	GRWVTVKRVLVRANSTGVAPTVISSVTFRSTIRPLLKVRVVLPQLQVGSCYRPGLSNVIRS*
Ga0063454_1016984762	3300004081	Soil	SAAQSFAGKLATFQRYRSTTKLWVKVKRVLLKANTTGVAPTVVTSAKFGARIKAKLRVRVTFGSKQVGPCYAAGRSNTIRS*
Ga0063455_1012877351	3300004153	Soil	QRYNGTRWIAVKSVLLGANATGQAPTVISSSTFRSAAKAGLRMRVVIGQAQVGTCYLPGISNTILS*
Ga0066673_104863842	3300005175	Soil	AKKRWVKVKRVLLQADTTGVAPTVITSATFRSGIKAKQRVRVTLGAKQVGACYLAGRSNTIRS*
Ga0066679_108849571	3300005176	Soil	SATFQRYRPATKRWGSVKPVVLKANASGVAPTVITSAKFRSSLKARQRVRVVLGQKQVGSCYLAGTSNTVRS*
Ga0066671_110592271	3300005184	Soil	VLPLLHLGKAGRHRYTVRVSAAQSFAGKSATFQRRAGKRWVLVKRVTLRASTTGVAPTVISSATFRSGIKARLRVRVVLGQKQVGACYLAGRSNTIRS*
Ga0066388_1063936432	3300005332	Tropical Forest Soil	GKLATFQRYRSATRRWVKVKRVLLKANTTGVAPTVITSATFRSRAKGKVRVSLGSKQVGLCYAAGHSNTIRS*
Ga0070660_1017524561	3300005339	Corn Rhizosphere	KVATFQRYSTAKKRWVKVKRVLLQANTTGVAPTVITSATFRSGIKAKQRVRVTLGAKQVGSCYLAGRSNTIRS*
Ga0070689_1009539252	3300005340	Switchgrass Rhizosphere	STLKRWVNVKRVALKANTTGVAPTVISSATFRSGLRAKLRVRVVLGQAQVGTCYLAGRSNTIRS*
Ga0070713_1003568422	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	HRYALRVSAAQSFAGKSATFQRYRSTIKRWVNVKRVVLKANTTGVAPTVISSATFRSGLRAKLRVRVVLGQAQVGTCYLAGRSNTIRS*
Ga0070708_1010880281	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VGHWRAVRRVLLQANSTGVAPTVVTSAKFRSGLKAGIRVRVVLGQKQVGACYLVGRSNTIRSR*
Ga0070684_1011899671	3300005535	Corn Rhizosphere	VGRHRFALHVSAAESFAGKVATFQRYSTAKKRWVKVKRVLLQANTTGVAPTVITSATFRSGIKAKQRVRVTLGAKQVGSCYLAGRSNTIRS*
Ga0070665_1015927911	3300005548	Switchgrass Rhizosphere	GTLQRYNGVLARWVNVKRVVLRASSTGVFPTVISTSSFRSTVQARRKIRVVMPQLQVGSCYLPGRSNTILS*
Ga0066698_107928072	3300005558	Soil	TFQRYNGTLGRWIKVKRVLLRANATGVAPTVISSVSFRSAIRPRFKVRAVLPQLQVGSCYRPGRSNVIRS*
Ga0066670_106719051	3300005560	Soil	AKKRWVKVKRVLLQANTTGVAPTVITSATFRSGIKAKQRVRVTLGAKQVGACYLAGRSNTIRS*
Ga0066903_1004319661	3300005764	Tropical Forest Soil	SVNVSAAESFAGKLATFQRYRSATKRWVKVKRVLLKANTTGVAPTVISSATFGALVRAGVKVRVTLGSKQVGLCYAAGHSNAIRS*
Ga0066903_1027027051	3300005764	Tropical Forest Soil	TKRWRTVKRVLLKADATGVAPTVISSAKFRSSISARVKVRVVLGQTQVGACYLAGRSNSIRS*
Ga0066903_1048651172	3300005764	Tropical Forest Soil	YATFQRYRSSTKRWVKVKRVLLQANATGIAPTVITSAAFRSGIRSGVRVRVTLGKAQVGSCYVAGTSNTIRS*
Ga0068858_1009620782	3300005842	Switchgrass Rhizosphere	VVLKANTTGVAPTVISSATFRSGLRAKLRVRVVLGQAQVGTCYLAGRSNTIRS*
Ga0070717_120763442	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	KQWVKVKRVPLTASAAGTAPTVITSAKFRSTIKARTRVRVTLGTKQVGACYLAGRSNTIRS*
Ga0066696_104100211	3300006032	Soil	SKAKKRWVKVKRVLLQADTTGVAPTVITSATFRSGIKAKQRVRVTLGAKQVGACYLAGRSNTIRS*
Ga0066653_105930432	3300006791	Soil	ALRRWITVKRVLLRANSTGVAPTVITTARFRSRIRAGLKVRVVLPGTQVGTCYLAGRSNTIRS*
Ga0066659_108548751	3300006797	Soil	TTKRWVKVKLVLLKANTTGVAPTVVTAATFRSGIKANVRVRVTLGARQVGSCYLAGRSNTIRS*
Ga0079221_105629031	3300006804	Agricultural Soil	SSTKRWVNVKRVLLRADTTGVAPTVITSAAFRSAIRSGVKVRATLGAKQVGSCYLAGRSNTIRS*
Ga0079220_100916751	3300006806	Agricultural Soil	KRWRGVKRVLLQANSTGVAPTVFTTATFRSSLKRGIRVRVVLTQKQAGICYLAGTSNTLRTR*
Ga0105243_131245752	3300009148	Miscanthus Rhizosphere	SFAGKSATFQRYRSTIKRWVNVKRVVLKANTTGVAPTVISSATFRSGLRAKLRVRVVLGQAQVGTCYLAGRSNTIRS*
Ga0105248_118133491	3300009177	Switchgrass Rhizosphere	RYNGTLGRWVVVRRVVLKANTTGVAPTVITSRSFRSSVRGGLRVRTTLGQAQVGACHAPGLSNTVRS*
Ga0105248_118461272	3300009177	Switchgrass Rhizosphere	ATFQRYRSTIKRWVNVKRVVLKANTTGVAPTVISSATFRSGLRAKLRVRVVLGQAQVGTCYLAGRSNTIRS*
Ga0105238_118057461	3300009551	Corn Rhizosphere	QTFAGKFATFQRYRSATKRWVTVERVLLKANTTGVAPTVVTSAKFRARIKAKLRVRVILGSKQVGSCYAAGRSNTIRS*
Ga0134063_101928841	3300010335	Grasslands Soil	QSFAGKSATFERYRPALKRWRAVQRVLLHANSSGVAPTVITSAKFRSSLKARQRVRVVLGQKQVGSCYLAGTSNTVRS*
Ga0126378_128550292	3300010361	Tropical Forest Soil	FAADTFAGKLATFQRYRSTTKRWVKVKRVLLKANTTGAAPTVITAAKFRASIKSKVRVRVTLGATQVGLCYAAGHSNTIRS*
Ga0134066_101899252	3300010364	Grasslands Soil	RPALRRWVTVKHVLLRANSTGVAPTVITTARFRSRIRAGLNVRVVLPGTQVGTCYLAGRSNTIRS*
Ga0126379_122685101	3300010366	Tropical Forest Soil	ATFQRYRSATKRWVKVKRVLLKANTTGVAPTVISSATFGALVRAGVKVRVTLGSKQVGLCYAAGHSNTIRS*
Ga0105239_122466052	3300010375	Corn Rhizosphere	ATFQRYSTAKKRWVKVKRVLLQANTTGVAPTVITSATFRSGIKAKQRVRVTLGAKQVGSCYLAGRSNTIRS*
Ga0126381_1013401312	3300010376	Tropical Forest Soil	WVKVKRVLLKSNTTGVAPTVITSAKFSSRVRAKHVRVTLGLKQVGLCYAAGRSNSIHS*
Ga0126381_1015053712	3300010376	Tropical Forest Soil	WVKVKRVLLKSNTTGVAPTVITSAKFSSRVRAKHVRVTLGPKQVGGCYAAGRSNTIHS*
Ga0120162_11065862	3300011997	Permafrost	AVKSVLLRANTTGVGPTVISSATFRSAIKARLRVRVVLGTAQVGTCYLPGTSNTILS*
Ga0120118_10546191	3300012010	Permafrost	FQRYSATLRRWLVVRRVVLRANTSGVAPTVISSVRFRSSIRARLRVRAVLGQTQVGSCYLTGRSNIIHS*
Ga0120159_12148281	3300012014	Permafrost	SAALRRWLVVRRVVLRANTSGVAPTVISSVTFRSSVRARLRVRAVLGQTQVGSCYIAGRSNIIYS*
Ga0120139_11625741	3300012019	Permafrost	RYSAALRRWVVVRRVVLRANTSGVAPTVISSVTFRSSVRARLRVRAVLGQTQVGSCYITGRSNIIYS*
Ga0136623_100527661	3300012045	Polar Desert Sand	YGTFQRFNGTLGRWVTVKRVLLRANSTGVAPTVISSVAFRLTIRPLLKVRVVLPQLQVGSCYRPGRSNVIRS*
Ga0136619_103890651	3300012185	Polar Desert Sand	VKRVLLRANSTGVAPTVITAVSFRSTIPSRLKVRVVLPQLQAGSCYLPGLSNTILS*
Ga0136620_101718671	3300012186	Polar Desert Sand	TLGRWVKVKRVLLRANSTGVAPTVISSVTFRSTIRPLLKVRVVLPQLQVGSCYRPGRSNVIRS*
Ga0136620_102644991	3300012186	Polar Desert Sand	RWVTVKRVLLRANSTGVAPTVISSVTFRSTIRPRLKVRVVLPQLQVGSCYRPGRSNVIRS
Ga0136620_103189821	3300012186	Polar Desert Sand	SFAGKYGTFQRFNGTLGRWVTVKRVLLRANSTGVAPTVISSVAFRSTIRPLLKVRVVLPQLQVGSCYRPGRSNVIRS*
Ga0137378_103798341	3300012210	Vadose Zone Soil	KSATFERYRPALKRWRAVQRVLLHANSSGVAPTVITSAKFRSSLKARQRVRVVLGQKQVGSCYLAGTSNTVRS*
Ga0137377_112402752	3300012211	Vadose Zone Soil	RPALKRWRAVQRVLLHANSSGVAPTVITSAKFRSSLKARQRVRVVLGQKQVGSCYLAGTSNTVRS*
Ga0150985_1046588542	3300012212	Avena Fatua Rhizosphere	KSVLLGANATGQTPTVISSSTFRSAVKAGLRVRVVIGQAQVGTCYLPGISNTILS*
Ga0150985_1049251142	3300012212	Avena Fatua Rhizosphere	VRVSAAQSFGGKLATFQRYRSTTKLWVKVKRVLLKANTTGVAPTVVTSAKFGARIKAKLRVRVTFGSKQVGPCYAAGRSNTIRS*
Ga0137367_100958675	3300012353	Vadose Zone Soil	AVKIVLLRPNTTGLAPTVISTATFRSSIKARLRVRAVLGPAQVGTCYLPGISNTVLS*
Ga0137375_102985541	3300012360	Vadose Zone Soil	VKVKRVLLRANRTGVAPTVITSAKFRSRIKAGLRVRVVLGQTQVGSCYLAGRSNTIRS*
Ga0150984_1003273812	3300012469	Avena Fatua Rhizosphere	LLGANATGQAPTVISSSTFRSAVKAGLRVRVVIGQAQVGTCYLPGISNTILS*
Ga0136633_11081471	3300012527	Polar Desert Sand	KRVLLRANSTGVAPTVISSVAFRSTIRPLLKVRVVLPQLQVGSCYRPGRSNVIRS*
Ga0136635_100122601	3300012530	Polar Desert Sand	KRVVLKANASGVAPTVVSSVTFRSTVARRLKVRVVLPQAQVGTCYLAGTSNTILT*
Ga0136626_1057251	3300012669	Polar Desert Sand	SFAGKYGAFQRFNGTLGRWVTVKRVLVRANSTGVAPTVISSVTFRSTIRPLLKVRVVLPQLQVGSCYRPGLSNVIRS*
Ga0136612_100182941	3300012680	Polar Desert Sand	YGTFQRFNGTLGRWVTVKRVLLRANSTGVAPTVISSVSFRSTIRPLLKVRVVLSQVQVGSCYRPGRSNVIRS*
Ga0136614_110841321	3300012684	Polar Desert Sand	YGTFQRFNGTLGRWVKVKRVLLRANSTGVAPTVISSVTFRSTIRPLLKVRVVLPQLQVGSCYRPGRSNVIRS*
Ga0157291_102411591	3300012902	Soil	GKYGIFQRFNGTLGRWVTVKRVLLRANSTGVAPTVISSVTFRSAIRPFLKVRAVLPQLQVGSCYRPGRSNVIRS*
Ga0157301_103884011	3300012911	Soil	VKRVLLRGNSTGVSPTVISSVTFGSTVPSRLKVRVILAQLQVGSCHAPGRSNTILA*
Ga0164303_110913122	3300012957	Soil	RVVLKANTTGVAPTVISSATFRSGLRVKLRVRVVLGQAQVGTCYLAGRSNTIRS*
Ga0164299_116978651	3300012958	Soil	LKANTTGVAPTLISSATFRSGLRAKLRVRVVLAQAQVGTCYLAGRSNTIRS*
Ga0164305_110828242	3300012989	Soil	YALRVTAAQSFAGTSATFQRYRSTIKRWVNVKRVVLKANTTGVAPTVISSATFRSGLRAKLRVRVVLGQAQVGTCYLAGRSNTIRS*
Ga0164305_117289703	3300012989	Soil	SSTGVAPAVASTASFRSAVKVGLKVRVLINQAQVGTCYLAGVSNTVRS*
Ga0157369_104272802	3300013105	Corn Rhizosphere	GRHRYALRVSAAQSFAGKSATFQRYRSTLKRWVNVKRVVLKANTTGVAPTVISSATFRSGLRAKLRVRVVLGQAQVGTCYLAGRSNTIRS*
Ga0157372_103034532	3300013307	Corn Rhizosphere	LSVSAAQTFAGKFATFQRYRIATKRWVKVKRVLLKADTTGVAPTVVTSATFRARIKAKLRVRVILGSKQVGSCYAAGRSNTIRS*
Ga0120147_10503712	3300013758	Permafrost	FQRYSAALRRWVVVRRVVLRANTSGVAPTVISSVTFRSSVRARLRVRAVLGQTQVGSCYLAGRSNIIYS*
Ga0120111_11461811	3300013764	Permafrost	RWVVIRRVVLRANASGIAPTLISSVTFRSGVRARLRVRAVLGQTQVGSCYLAGRSNIIYS
Ga0120155_10199275	3300013768	Permafrost	VKVKRVLLRANSTGIAPTVISSVSFRSTIKPRLKVRVILPQLQVGSCYLSGRSNVILS*
Ga0120158_100750974	3300013772	Permafrost	QSFAGKSASFQRYSAALGRWVLVRRVVLRANTSGVAPTVISSVRFRSSIRARLRVRAVLGQTQVGSCYLTGRSNIIHS*
Ga0120158_102340572	3300013772	Permafrost	ASFQRYSAALRRWVLVRRVALRANASGVAPTMISSVTFRSSIRARLRVRAVLGQTQVGSCYIAGRSNIIYS*
Ga0134078_102698341	3300014157	Grasslands Soil	SVPLKASTAGVAPTVLSTVSFRSTVKARLRVRVALGQAQVGGCYAPGLSNTIYS*
Ga0182008_107103531	3300014497	Rhizosphere	LHADSSGKAPTVVSSVKFRSSVKARVRVVLVQKQVGSCYAAGTSNTIRAR*
Ga0173483_101724181	3300015077	Soil	LQRYIGTRHRWVNVKRVLLRANMTGVAPTVISSVTFRSSIRALLKIRVVLPKLQVGTCYVAGRSNVILS*
Ga0167667_10111154	3300015189	Glacier Forefield Soil	NTTLARWVNVKRVLLRPNSTGVAPTVISTASFRSTVPSRLKIRVVLPQLQVGSCYTAGRSNTILS*
Ga0132255_1023206353	3300015374	Arabidopsis Rhizosphere	SATFQRYNSALKRWVKVKRVLLKANTTGVAPTVISSTNFRSGLRAKLRVRAVLGQAQVGTCYLAGRSNTIRS*
Ga0180121_100076606	3300017695	Polar Desert Sand	KRVVLKANASGVAPTVVSSVTFRSTVARRLKVRVVLPQAQVGTCYLAGTSNTILT
Ga0180121_101313881	3300017695	Polar Desert Sand	TVKRVLLRANSTGVAPTVISSVAFRSTIRPLLKVRVVLPQLQVGSCYRPGRSNVIRS
Ga0187821_101129261	3300017936	Freshwater Sediment	KTKKRWVKVKRVVLHADTTGVAPTVVTSATFRSGIKARQRVRVTLGAKQVGSCYLAGRSNTIRS
Ga0066655_112634921	3300018431	Grasslands Soil	RYRPTTKRWVKVKLVLLKANTTGVAPTVVTAATFRSSITAGVRVRVTLGARQVGSCYLAGRSNTIRS
Ga0066667_114656232	3300018433	Grasslands Soil	TKAAKHQYSLKVFAAQTFAGTFATFQRYRKATRRWVKVKRVLLKANTTGTAPTVITSAKFRSSIRARLRVRAILGSKQVGPCYAAGRSNTIRS
Ga0066662_103481934	3300018468	Grasslands Soil	LRVPAAQSFTRKYKTLQRYRATTKRRVNVKLVLPKANTTGVAPTGVNAATYRSGIKANVRVRVTLGARQVGSCYLAGRSNTIRS
Ga0193719_101045663	3300021344	Soil	VRRWLKVRSVLMRPNATGVAPTVISSATFRSKVKLRLRVRVVLGQAQVGSCYLAGRSNVIRS
Ga0126371_130072121	3300021560	Tropical Forest Soil	SFAGKYATFQRYRAATKRWSTVKRVLLKADTSGKAPTVVTSAKFRANLKARTRVRVLLGQKQVGSCYLAGRSNTIRS
Ga0247668_10108853	3300024331	Soil	TVKRVLLKANTTGVAPTVVTSAKFRARIKAKLRVRVILGSKQVGSCYAAGRSNTIRS
Ga0208355_10610902	3300025581	Arctic Peat Soil	VKSVLLRANTTGVAPTVLSTATFRSAIKARLRVRVVLGTAQVGTCYLPGTSNTILS
Ga0207692_100538381	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	AAQTFAGKFATFQRYRSATKRWVKVKRVLLKADTTGVAPTVVTSAKFRARIKAKLRVRVILGSKQVGSCYAAGRSNTIRS
Ga0207692_108586631	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	FAGKLATFQRYGSTTKRWVKVKRVLLKPNTSGAAPTVITSARFRSSIRAKLRVRVTLGSKQVGPCYAAGHSNTIRS
Ga0207657_111934801	3300025919	Corn Rhizosphere	MAGTLREWIAKTGKRGKVATFQRYSTAKKRWVKVKRVLLQANTTGVAPTVITSATFRSGIKAKQRVRVTLGAKQVGSCYLAGRSNTIRS
Ga0207694_114054601	3300025924	Corn Rhizosphere	QRYRSATKRWVKVKRVLLKADTTGVAPTVVTSAKFRARIKAKLRVRVILGSKQVGSCYAAGRSNTIRS
Ga0207687_116949181	3300025927	Miscanthus Rhizosphere	ATFQRYRSTIKRWVNVKRVVLKANTTGVAPTVISSATFRSGLRAKLRVRVVLGQAQVGTCYLAGRSNTIRS
Ga0207664_107159781	3300025929	Agricultural Soil	KTAKRHYALSVSAAQTFAGKFATFQRYRSATKRWVKVKRVLLKADTTGVAPTVVTSAKFRARIKAKLRVRVILGSKQVGSCYAAGRSNTIRS
Ga0207665_109879291	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	KGVKRVLLKANTTGTAPTVLTTAKFRSSLKAKLRVRVVLKQTQVGACYAAGTSNTIRS
Ga0207667_118403702	3300025949	Corn Rhizosphere	SAAQSYVGKYVLFQRYRPALSRWVTVKRVVLRRAVPATAPTVVSSATFRSGIKAKQRVRVTLGAKQVGSCYLAGRSNTIRS
Ga0307316_101685542	3300028755	Soil	WVTVKRVLLRANSTGVAPTVISSVTFRSSIRARLKIRVVMPQLQVGACYVAGRSNVILS
Ga0307312_107973791	3300028828	Soil	KRVLLKANSTGVAPTVVTSRRFRSSVRRGLRVRVTLGQTQVGSCYAPGLSNTILS
Ga0102757_114305902	3300030785	Soil	SFQRYRLALRRWVTVKRVLLRANATGVAPTVITSAKFRSRINAGLRVRVVLGQTQVGSCYLAGRSNTIRS
Ga0170824_1050714361	3300031231	Forest Soil	LKRWVSVKRVLLLANNTGVVPTVITSAKFRSALRANLRVRVVLGQKQVGSCYLAGRSNTIRS
Ga0306923_124593342	3300031910	Soil	PKLQLKKVSRHHYSLQVLAAESFAGKLATFQRLTATKKWVKVKRVLLKANTTGVAPTVITAAKFGARVNAKHVRVSLGSKQVGLCYAAGHSNSIHS
Ga0308174_115904362	3300031939	Soil	RQATRRWVKVKRVTLKANATGVAPTVITSAKFRSRIKAKLRVRVSLGSKQVGLCYVAGRSNTIRS
Ga0308176_101223984	3300031996	Soil	VSAAQSFAGKQATFQRYKKATKRWVKVKRVKLKANTTGVAPTVVTSAKFRSKIKSRLKVRIVLGPKQVGACYAAGRSNTIRS
Ga0310899_105530251	3300032017	Soil	YNGTLRRWIRVKRILLRANGTGVAPTVISSVAFRSAIKPRLKVRVILPQLQVGSCYRPGRSNVILS
Ga0306920_1001132175	3300032261	Soil	SRHHYSLQVLAAESFAGKLATFQRLTATKKWVKVKRVLLKANTTGVAPTVITAAKFGARVNAKHVRVSLGSKQVGLCYAAGHSNSIHS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094583

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences