NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F094561

Metagenome Family F094561

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F094561
Family Type Metagenome
Number of Sequences 106
Average Sequence Length 122 residues
Representative Sequence LVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQRADHRPARLRPTGWVRPAILLAAGLGGRAPPSHWAR
Number of Associated Samples 74
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 6.60 %
% of genes from short scaffolds (< 2000 bps) 4.72 %
Associated GOLD sequencing projects 72
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (95.283 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(33.019 % of family members)
Environment Ontology (ENVO) Unclassified
(34.906 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(40.566 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186.188.190.
1F14TB_1003306061
2JGI25407J50210_101004682
3JGI25407J50210_101651261
4JGI25407J50210_101700311
5Ga0063356_1021765262
6Ga0081538_100090979
7Ga0081538_101706352
8Ga0081539_100330691
9Ga0081539_104360661
10Ga0075433_103796334
11Ga0075434_1004142441
12Ga0075424_1003256421
13Ga0114129_104797641
14Ga0126307_106249062
15Ga0105088_10003635
16Ga0105064_11184911
17Ga0126313_101621421
18Ga0126313_102482971
19Ga0126315_108321401
20Ga0126315_110712941
21Ga0126308_105567851
22Ga0126312_103589211
23Ga0126311_100113266
24Ga0126311_100173115
25Ga0126311_100711853
26Ga0137368_105252392
27Ga0157372_118006041
28Ga0182000_100276193
29Ga0182000_101768712
30Ga0190266_104763792
31Ga0184610_10365911
32Ga0184604_100364391
33Ga0184621_101139291
34Ga0184624_100297703
35Ga0184624_104830452
36Ga0184640_100540241
37Ga0190268_106386592
38Ga0190268_118922491
39Ga0190267_109070961
40Ga0193741_10603282
41Ga0193741_11036301
42Ga0210381_101423301
43Ga0210381_104054341
44Ga0224452_10031755
45Ga0222623_101625601
46Ga0208213_1017992
47Ga0208581_1018252
48Ga0209846_10180911
49Ga0209795_102061711
50Ga0209461_101810902
51Ga0209814_100110491
52Ga0209382_123432321
53Ga0268265_105190872
54Ga0247823_102158033
55Ga0247822_102421181
56Ga0307291_10310613
57Ga0307295_100896142
58Ga0307285_100021705
59Ga0307285_100487242
60Ga0307311_100055101
61Ga0307298_101085581
62Ga0307301_100878922
63Ga0307315_100923651
64Ga0307315_102315451
65Ga0307319_101216071
66Ga0307319_102022071
67Ga0307319_102034011
68Ga0307318_103123852
69Ga0307320_100692253
70Ga0307320_104171401
71Ga0307290_100113681
72Ga0307287_100146613
73Ga0307287_101495322
74Ga0307305_101508152
75Ga0307305_103286332
76Ga0307296_101144463
77Ga0307296_102860172
78Ga0307314_100807392
79Ga0307289_100075351
80Ga0307289_104590511
81Ga0307300_101156901
82Ga0307277_102218092
83Ga0307304_102399352
84Ga0268253_102884601
85Ga0268253_103236381
86Ga0268253_103743411
87Ga0307408_1002883971
88Ga0307408_1014791461
89Ga0307408_1022641932
90Ga0307405_100118465
91Ga0307413_100646921
92Ga0307406_116479471
93Ga0307407_103866292
94Ga0307412_101445421
95Ga0307409_1000934581
96Ga0307409_1016235762
97Ga0307416_1002581693
98Ga0307416_1011304921
99Ga0307416_1013128931
100Ga0307411_100973171
101Ga0307411_103007953
102Ga0326721_100427061
103Ga0307415_1000223041
104Ga0307415_1001055141
105Ga0307415_1003627531
106Ga0334913_035663_8_265
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 54.68%    β-sheet: 0.00%    Coil/Unstructured: 45.32%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100110LVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQRADHRPARLRPTGWVRPAILLAAGLGGRAPPSHWARExtracel.Cytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
4.7%95.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Groundwater Sediment
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Serpentine Soil
Sub-Biocrust Soil
Soil
Soil
Groundwater Sand
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Tabebuia Heterophylla Rhizosphere
Populus Rhizosphere
Rhizosphere
Corn Rhizosphere
Agave
Agave
5.7%33.0%9.4%2.8%2.8%4.7%5.7%17.0%3.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TB_10033060613300001431SoilVLGLVSLGATLARHFRAGLRTGDRPAGEPLGRLTIRLALLQVTIYLVQELIERAAAGYPMGGPVAGRLLLAGITVQLLVASLLALGLAWAGRVAEAAGRALRRVRPHRPDRRPARLRPTAWVRPAILLAAGLGGRAPPASAA*
JGI25407J50210_1010046823300003373Tabebuia Heterophylla RhizosphereLQLTIYLVQELIERAAAGVPLVGPVDGRLLLTGIAVQLLVAGALALGLAWAGRVAEVVGRALRRRRPHRPDPRPAQVHPAGWVRPAILLAAGLGERAPPVRASSA*
JGI25407J50210_1016512613300003373Tabebuia Heterophylla RhizosphereLVRHFRAGLRTGGRPAGEPPGRLTARLALLQVTIYLVQELIERAAAGVPLVGPVDGRLLLTGIAVQLLVAGALALGLAWAGRVAEVVGRALRRRRLLRPDPRPAGISSAGWVRPAILLAAGLGERGPPANWAR*
JGI25407J50210_1017003113300003373Tabebuia Heterophylla RhizosphereGLRTGSRPAGEPPGRLAARLAALQVTIYLVQELIERAAAGVPVVGPVDGRLLLAGIAVQLLVATGLALGLAWAGRVAEVAGRALRRRRPARPDSRPARLRRPTGWVRPAILLAAGLGGRAPPGLPA*
Ga0063356_10217652623300004463Arabidopsis Thaliana RhizosphereVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLGRPDPRPVRLRPTGWVRPAILLAAGMGGRAPPASGA*
Ga0081538_1000909793300005981Tabebuia Heterophylla RhizosphereAARLALLQLTIYLVQELIERAAAGVPLVGPVDGRLLLTGIAVQLLVAGALALGLAWAGRVAEVVGRALRRRRPHRPDPRPAQVHPAGWVRPAILLAAGLGERAPPVRASSA*
Ga0081538_1017063523300005981Tabebuia Heterophylla RhizosphereARSFRAGLRSGGRPAGEPPGRLAARLAVLQVTIYLVQELVERAAAGAPLGGPMDGRLLLTGIAVQLLVATGLALGLAWAGRVAEVAGRALRRRSRARPDPHPVRLRPTGWVRPAILLAAGLGGRAPPPVWAR*
Ga0081539_1003306913300005985Tabebuia Heterophylla RhizosphereGGSLGPTRAGGSGAGRRPRGRPPGEPLGRLAARLALLQVTIYLVQELIERLAAGFPLWGPVDARLLLAGVGVQLLVAAGLAVGLAWAGRVAEVAGRALCRRRAVRPEPRPARPRPTGWVRPGILLAAGLGGRAPPASWAR*
Ga0081539_1043606613300005985Tabebuia Heterophylla RhizosphereGPRGPPRPGAAGSGGGPGAARAGEPLGRLAARLALLQITIYLVQELIERLAAGFPLWGPVDARLLLVGVAVQLLVAAGLALGLAWAGRAAEVAGRALRRHRAAHPEPRPARPRPTGWVRPAILLAAGLGGRAPPTSWAR*
Ga0075433_1037963343300006852Populus RhizosphereLLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVASVLALGLAWAGRVAEVAGRALRRRRLRPLDPRPARLRPTGWVRPAILLAAGLGGRAPPVWAR*
Ga0075434_10041424413300006871Populus RhizosphereLLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVASVLALGLAWAGRVAEVAGRALRRRRLRSLDPRPARLRPTGWVRPAILLAAGLGGRAPPVWAR*
Ga0075424_10032564213300006904Populus RhizosphereLLQVTIYLVQELIERAAAGVPLGGPFNARLLLTGIAVQLLVASVLALGLAWAGRVAEVAGRALRRRLHRLDPRPARLRPVGWVRPAILLAAGMGGRAPPGPGA*
Ga0114129_1047976413300009147Populus RhizosphereVAGAVVGHGLAYALAVPEPGRRLAVLAGSGHAYWSSAIAAAIVLGLASLGATLTRSFRDGLHTGSRPAGEPLSRRAARLALLQVTIYLLQEVIERTAAGVPPVSPIDGRLLLTGVVVQLLVAAVLALGLTWAGRVAEVAGRALRRRLLHRRDPRPARPRPTGWVRPAILLAAGLGGRAPPSWAR*
Ga0126307_1062490623300009789Serpentine SoilSLGTTLARSFRAGLRPEGRPAGEPLGRLVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRPQRAGHRPARLRPAGWVRPAILLAAGLGGRAPPAHLAR*
Ga0105088_100036353300009810Groundwater SandGAVAGHTLAYALAAPEPGRRLALLLTSGHAYWSAAIAVGVVLGLGSLLATLTRHFRAGLHPERRPAGEPLGRLTVGLALLQITIYLVQELLERAAAGIPLGSPVDGRLLTTGLLSQVLVAAIIGAVLAWAGRVAEVAGRALGRRRPRRLASRRGLRLPRPIGWVRPAVLLAAGLGGRAPPTG*
Ga0105064_111849113300009821Groundwater SandERRPAGEPLGRLTVGLALLQITIYLVQELLERAAAGIPLGSPVDGRLLTTGLLSQVLVAAIIGAVLAWAGRVAEVAGRALGRRRPRRLASRRGLRLPRPIGWVRPAVLLAAGLGGRAPPTG*
Ga0126313_1016214213300009840Serpentine SoilELIERLAAGVPLWGPVDGRLLLAGVAVQLLVATGLALALAWAGRVAEVAGRALRRRQAGRLEPGPARPRPTGWVRPVVLLAAGLGGRAPPASWAR*
Ga0126313_1024829713300009840Serpentine SoilSGHQYWSAAIAAAIVLGLGSLGATLARSFRAGLRPGGRPAGEPLGRLAARLALLQVTIYLVQELIERLAAGVPLWGPVDGRLLLTGVAVQLLVAAGLALGLAWAGRVAEVAGRALRRRRVARPEPRSARPRPTGWVRPAILLAAGLGGRAPPTSWAR*
Ga0126315_1083214013300010038Serpentine SoilPPGRLAARLAVLQVTIYLVQELIERAAAGVPVVSPVDGRLLLAGIAVQLLVATGLAIGLAWAGRVAEVAGRALRRRLRVRPDSRPARLRPTGWVRPAILLAAGLGGRAPPPIWAR*
Ga0126315_1107129413300010038Serpentine SoilLQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAAVLALGLAWAALVAEVAGRALRRRRRHRPDPRPAPLRPSGRVRPAILLAAGMGGRAPPAIWAR*
Ga0126308_1055678513300010040Serpentine SoilLLQVTIYLLQELIERAAAGVPLGGPVDGRLLLTGIAVQLLVAVVLALGLAWAGRVAEVAGRALRRRRRQRPDPRPARLRPTGWVRPAILLAAGMGGRAPPGPAA*
Ga0126312_1035892113300010041Serpentine SoilPRLALLAGSGHQYWSAAIAAAIVLGLGSLGATLARSFRAGLRPEGRPAGEPPGRLAARLALLQVTIYLVQELIERLAAGVPLWGPVDGRLLLAGVAVQLLVATGLALALAWAGRVAEVAGRALRRRQAGRLEPGPARPRPTGWVRPVVLLAAGLGGRAPPASWAR*
Ga0126311_1001132663300010045Serpentine SoilVPQPGPRLALLAGSGHQYWSAAIAAAIVLGLGSLGATLARSFRAGLRPEGRPAGEPPGRLAARLALLQVTIYLVQELIERLAAGVPLWGPVDGRLLLAGVAVQLLVATGLALALAWAGRVAEVAGRALRRRQAGRLEPGPARPRPTGWVRPVVLLAAGLGGRAPPASWAR*
Ga0126311_1001731153300010045Serpentine SoilLGLGSLGATLARSFRAGLRPEGRPAGEPLGRLVARLALLQVTIYLVQELIERLAAGVALWGPVDGRLLLTGVTVQLLVAAGLALALAWAGRVAEVAGRALRRRRAARPERGHRRPRPTAWVRPAILLAAGLGGRAPPAPAA*
Ga0126311_1007118533300010045Serpentine SoilSAAIAAAIVLGLVSLGTTLARSFDAGLRPGDRPPGEPLGRLAGRLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRPQRADHRPARLRPAGWVRPAILLAAGLGGRAPPAHLAR*
Ga0137368_1052523923300012358Vadose Zone SoilSAAVAAAIVLGLTSLAATLAQHFRAGLDGGRHPAGERFGRLAGRLALLQVGIYLVQEVLERTAAGAPLGDATDGRLLLFGMTVQIAVAFGLAAVLAWVGLVAEVAGQALRRRRLPRPEPRSALPLPRPTGRVRQALLLAAGLGGRAPPIG*
Ga0157372_1180060413300013307Corn RhizosphereAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQRADHRPARLRPTGWVRPAILLAAGLGGRAPPSHWAR*
Ga0182000_1002761933300014487SoilELIERAAAGVPLGGPVDGRLLLTGIAVQLLVAGGLALGLAWAGRVAEVAGRALRRRLPRPADHRPARLRPTGWVRPAILLAAGLGGRAPPAHLAR*
Ga0182000_1017687123300014487SoilGSLAATLARSFRAGLTTSGRPAAEPPGRLTGRLALLQVTIYLVQELIERLAAGVPLWGPVDGRLLLTGVAVQLLVAAGLALGLAWAGRVAEVAGRALRHRLAARPERNHHRPRPTGWLRPAVLLAAGMGGRAPPTSWAR*
Ga0190266_1047637923300017965SoilAEPLGRLVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIVVQLLVAGLLALGLAWAGRVAEVAGRALRRRRLQRPDHRPAILRPAGWVRPAILLAAGLGGRAPPAHLAR
Ga0184610_103659113300017997Groundwater SedimentRPARRPAGEPLGRLAGRLALLQITIYLVQELIERAAAGVPLGGSVHGRLLLTGVAVQLLVAAFLAVGLAWAGRVAEVAGRALRRWRLQRPDARPARPRPPRWVRPARLLAAGLGGRAPPAFRVI
Ga0184604_1003643913300018000Groundwater SedimentPAAEPLGRLVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQWADHRPARLRPSGWVRPAILLAAGLGGRAPPAHLAR
Ga0184621_1011392913300018054Groundwater SedimentEPLERLVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGVAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQWADHRPARLRPTGWVRPAILLAAGLGGRAPPSHWAR
Ga0184624_1002977033300018073Groundwater SedimentRAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRPLQRADHRPARLRPTGWVRPAILLAAGLGGRAPPSHWAR
Ga0184624_1048304523300018073Groundwater SedimentVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRFLRRSDPRPARLRPAGWVRPASLLAAGQGGRAPPALGA
Ga0184640_1005402413300018074Groundwater SedimentTLARSFRAGLRPGGRPSAEPLGRLIARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQWADHRPARLRPTGWVRPAILLAAGLGGRAPPSHWAR
Ga0190268_1063865923300018466SoilLQVTIYLVQELIERAAAGVPLGGPVDGRLLLTGIAVQLLVAVVLALGLAWAGRVAEVAGRALRRRRLRRPDPRPARLRPTGRARPAILLAAGMGGRAPPGPAA
Ga0190268_1189224913300018466SoilRPPGEPVGRLAGRLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLHRPDSRPARLRPTGWVRPAILLAAGLGGRAPPASWAR
Ga0190267_1090709613300019767SoilAGSGHAYWSAAIAAAIVLGLASLGTTLARSFRAGLRPGGRPAPEPLERLVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALAVGLAWAGRVAEVAGRALRRRFLRRPDPRPARLRPAGWVRPASLLAAGLGGRAPPPIWAH
Ga0193741_106032823300019884SoilLIERAAAGVPLGGPVDGRLLFTGIAVQLLVAGVLALGLAWAGRVAEVAGRALRRRRLHRPDLRPARLRPTGWVRPAILLAAGLGGRAPPAPAA
Ga0193741_110363013300019884SoilLAGRLALLQVTIYLVQELIERAAAGVPLGGSVHGRLLLTGVAVQLLVAAFLAVGLAWAGRVAEVAGRALRRRRLQRPDARPARLRPTRWVRPARLLAAGLGGRAPPTFRVI
Ga0210381_1014233013300021078Groundwater SedimentRAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQWADHRPARLRPTGWVRPAILLAAGLGGRAPPSHWAR
Ga0210381_1040543413300021078Groundwater SedimentAGLRPGGRPAREPLERLVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGVAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQWADHRPARLRPAGWVRPAILLAAGLGGRAPPAHLAR
Ga0224452_100317553300022534Groundwater SedimentGGRPSAEPLGRLIARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQWADHRPARLRPTGWVRPAILLAAGLGGRAPPSHWAR
Ga0222623_1016256013300022694Groundwater SedimentRAGLRPARRPAGEPLGRLAGRLALLQVTIYLVQELIERAAAGVPLGGSVHGRLLLTGVAVQLLVAAFLAVGLAWAGRVAEVAGRALRRRRLQRPDARPARLRPTRWVRPARLLAAGLGGRAPPAFRVI
Ga0208213_10179923300026686SoilPAGEPVGRLAGRLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLGRPDPRPVRLRPTGRVRPAILLAAGMGGRAPPASGA
Ga0208581_10182523300026704SoilLAGRLALLQVTIYLLQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLGRPDPRPVRLRPTGRVRPAILLAAGMGGRAPPASGA
Ga0209846_101809113300027277Groundwater SandHFRAGLRPGRRQAREPFGRLAARLALLQVAIYLVQELLERVATGIPVGGPADGRLLLGGVLVQVLVAVAIAAGLAWVGQVAEVAGRAMCRRPPLRPAGLPARPRPTSWVRPAQLLAAGLGGRAPPIG
Ga0209795_1020617113300027718AgaveLAYALAVPEPGRRLAVLAGSGHAYWSAAIAAAIVLGLVSLGTTLARSFDAGLRPGDRPPGEPLGRLAGRLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLGRPDPRPVRLRPTGRVRPAILLAAGMGGRAPPASGA
Ga0209461_1018109023300027750AgaveLLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLGRPDPRPVRLRPTGRVRPAILLAAGMGGRAPPASGA
Ga0209814_1001104913300027873Populus RhizosphereIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQRADHRPARLRPTGWVRPAILLAAGLGGRAPPVWAR
Ga0209382_1234323213300027909Populus RhizosphereAAIVLGLASLGATLARSFRAGLRPGGRPSAEPLGRLVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQRADHRPARLRPTGWVRPAILLAAGLGGRAPPSHWAR
Ga0268265_1051908723300028380Switchgrass RhizosphereTLARSFRAGLRPGGRPSAEPLGRLVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQRADHRPARLRPTGWVRPAILLAAGLGGRAPPSHWAR
Ga0247823_1021580333300028590SoilPLGAGRPSAEPLGRLVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQRADHRPARLRPTGWVRPAILLAAGLGGRAPPSHWAR
Ga0247822_1024211813300028592SoilPSALTPGGRPSAEPLGRLVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQRADHRPARVRPTGWVRPAILLAAGLGGRAPPSHWAR
Ga0307291_103106133300028707SoilLVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQRADHRPARLRPTGWVRPAILLAAGLGGRAPPSHWAR
Ga0307295_1008961423300028708SoilPGGRTAAEPLGRLAGRLALLQVTIYLIQELIERAAAGVPLGGPVNGRLLLTGVAVQLLVAVVLALGLAWAGRVAEVAGRALRRRRLHRLDPRPARLRPSGWVRPAILLAAGLGGRAPPSTWAR
Ga0307285_1000217053300028712SoilGRLAGRLALLQVTIYLIQELIERAAAGVPLGGPVNGRLLLTGVAVQLLVAVVLALGLAWAGRVAEVAGRALRRRRLHRLDPRPARLRPSGWVRPAILLAAGLGGRAPPSTWAR
Ga0307285_1004872423300028712SoilPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQWADHRPARLRPTGWVRPAILLAAGLGGRAPPSHWAR
Ga0307311_1000551013300028716SoilFHAGLGPGGRTAAEPLGRLAGRLALLQVTIYLIQELIERAAAGVPLGGPVNGRLLLTGVAVQLLVAVVLALGLAWAGRVAEVAGRALRRRRLHRLDPRPARLRPSGWVRPAILLAAGLGGRAPPSTWAR
Ga0307298_1010855813300028717SoilGRPAPEPLERLVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGVAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQWADHRPARLRPPGWVRPAILLAAGLGGRAPPAHLA
Ga0307301_1008789223300028719SoilGLAYALAVPEPGRRLAVLAGSGHAYWSAAIAAAIVLGLVSLGATLARHFRAGLRTGDRPAGEPLGRLAIRLALLQVTIYLVQELIERAAAGVPLGGPVDGRLLLTGIAVQLLVAVVLALGLGWAGRVAEVAGRALRRRFLRRPDPRPARLRPTGWVRPASLLAAGQGGRAPPVLGA
Ga0307315_1009236513300028721SoilLLQVTIYLVQELIERVAAGVPLGGPVNGRLLLTGIAVQLVVAAALAVGLAWAGRVAEVAGRALGRRRRHGSEPRAARPRPTGWFRPSILLAAGLGGRAPPAPAA
Ga0307315_1023154513300028721SoilIAAAIVLGLASLGATLARSFRAGLRPGGRPSAEPLGRLVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQWADHRPARLRPTGWVRPAILLAAGLGGRAPPSHWAR
Ga0307319_1012160713300028722SoilPGGRPSAEPLGRLVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQRADHRPARLRPTGWVRPAILLAAGLGGRAPPSHWAR
Ga0307319_1020220713300028722SoilAARSFRAGLRPDARPAAEPLGRLVARLAVLQVTIYLVQELIERAAAGYPMGGPVAGRLLLGGITVQLLVASVLALGLAWAGRVAEAAGRAMRRARPHRPDRRPARLRPTAWFRPAILLAAGLGGRAPPAPAA
Ga0307319_1020340113300028722SoilGLRTGDRPAGEPLGRLAIRLALLQVTIYLVQELIERAAAGVPLGGPVDGRLLLTGIAVQLLVAVVLALGLGWAGRVAEVAGRALRRRFLRRPDPRPARLRPAGWVRPASLLAAGQGGRAPPVLGA
Ga0307318_1031238523300028744SoilLIERAAAGVPLGGPVNGRLLLTGIAVQLVVAAALAVGLAWAGRVAEVAGRALGRRRRHGSEPRAARPRPTGWFRPSILLAAGLGGRAPPAPAA
Ga0307320_1006922533300028771SoilLQVTIYLVQELIERAAAGVPLGGPVDGRLLLTGIAVQLLVAVVLALGLGWAGRVAEVAGRALRRRFLRRPDPRPARLRPAGWVRPASLLAAGQGGRAPPVLGA
Ga0307320_1041714013300028771SoilLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALAIGLAWTGRVAEVAGRALRRRGLQRADHRPARLRPAGWVRPAILLAAGLGGRAPPAHLAR
Ga0307290_1001136813300028791SoilIYLVQELVERAAAGVPLGGPVNGRLLVTGIAVQLVVAAALAVGLAWAGRAAEVAGRALRRHRRHDSEPRPARPRPTGWFRPSILLAAGLGGRAPPAPAA
Ga0307287_1001466133300028796SoilGLVSLGATLARSFHAGLGPGGRTAAEPLGRLAGRLALLQVTIYLIQELIERAAAGVPLGGPVNGRLLLTGVAVQLLVAVVLALGLAWAGRVAEVAGRALRRRRLHRLDPRPARLRPSGWVRPAILLAAGLGGRAPPSTWAR
Ga0307287_1014953223300028796SoilVQELIERVAAGVPLGGPVNGRLLLTGIAVQLVVAAALAVGLAWAGRVAEVAGRALRRRRRHGSEPRPARPRPTGWVRPSILLAAGLGGRAPPAPAA
Ga0307305_1015081523300028807SoilRLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQWADHRPARLRPTGWVRPAILLAAGLGGRAPPSHWAR
Ga0307305_1032863323300028807SoilVPLGGPVNGRLLLTGVAVQLLVAVVLALGLAWAGRVAEVAGRALRRRRLHRLDPRPARLRPSGWVRPAILLAAGLGGRAPPSTWAR
Ga0307296_1011444633300028819SoilLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGVAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQWADHRPARLRPAGWVRPAILLAAGLGGRAPPAHLAR
Ga0307296_1028601723300028819SoilLLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRPQRADHRPASLRPAGWVRPAILLAAGLGGRAPPAYLAR
Ga0307314_1008073923300028872SoilPLERLVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGVAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQWADHRPARLRPAGWVRPAILLAAGLGGRAPPAHLAR
Ga0307289_1000753513300028875SoilERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQWADHRPARLRPTGWVRPAILLAAGLGGRAPPSHWAR
Ga0307289_1045905113300028875SoilTIYLVQELIERAAAGVPLGGPVNGRLLLTGVAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQWADHRPARLRPAGWVRPAILLAAGLGGRAPPAHLAR
Ga0307300_1011569013300028880SoilELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQWADHRPARLRPTGWVRPAILLAAGLGGRAPPSHWAR
Ga0307277_1022180923300028881SoilQLGRLVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALAPGLAWAGRVAEVAGRALRRRRLQRADHRPARLRPTGWVRPAILLAAGLGGRAPPSHWAR
Ga0307304_1023993523300028885SoilGRPAAEPPGRLAGRLALLQVTIYLVQELVERAAAGVPLGGPVNGRLLVTGIAVQLVVAAALAVGLAWAGRAAEVAGRALRRRRRHDSEPRPARPWPTGWFRPSILLAAGLGGRAPPAPAA
Ga0268253_1028846013300030514AgaveGHAYWSAAIAAAIVLGLASLGATLTRSFDAGLRPGGRPAGEPLGRLAGRLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGVAVQLLIAGVLAVGLACAGRVAEVAGRALRRRRQPRHDPRPARLRPAGWARPAILLAAGLGGRAPPLLGA
Ga0268253_1032363813300030514AgaveTLARSFRAGLTSGGRPPGEPPGRLAGRLALLQVTIYLVQELIERAAAGVPLGGPVDGRLLFTGIAVQLLVAGVLALGLAWAGRVAEVAGRALRRRRLHRPDLRPARLRPIGWVRPAILLAAGLGGRAPPAPAA
Ga0268253_1037434113300030514AgaveGEPLGRLAARLALLQVTIYLVQELIERLAAGVPLWGPVDGRLLLTGVAVQLLVAAGLALGLAWAGRVAEVAGRALRRRHATRPEPRPARPRPTGWVRPAILLAAGLGGRAPPAPAA
Ga0307408_10028839713300031548RhizosphereGSGHAYWSAAIAAAIVLGLGSLGATLARDFRAGLRPGGRTAAEPLGRLAGRLALLQVTIYLLQELIERAAAGVPLGGPVDGRLLLTGIAVQLLVAVVLALGLAWAGRVAEVAGRALRRRRLRRPDPRPARLRPTGRARPAILLAAGMGGRAPPGPTA
Ga0307408_10147914613300031548RhizosphereEPLGRLAARLGLLQVTIYLVQELIERLAAGVPLWGPVDGRLLLTGVTVQLLVAAGLALALAWAGRVAEVAGRALRRRRAARPGRGHRRPRPIGWVRPAILLAAGLGGRAPPALAA
Ga0307408_10226419323300031548RhizosphereRLAAGVPLWGPVDGRLLLVGVAVQLLVATGLALALAWAGRVAEVAGRALRRRHAARPEPGPARPRPTGWVRPAILLAAGLGGRAPPTSWAR
Ga0307405_1001184653300031731RhizosphereEPLGRLAGRLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLGRPDPRPVRLRPTGRVRPAILLAAGMGGRAPPASGA
Ga0307413_1006469213300031824RhizosphereQELIERLAAGVPLWGPVDGRLLLTGVTVQLLVAAGRALALAWAGRVAEVAGRALRRRRAARPGRGHRRPRPIGWVRPAILLAAGLGGRAPPALAA
Ga0307406_1164794713300031901RhizosphereGSGHAYWSAAIAAAIVLGLASLGTTLARSFDAGLRPGDRPPGEPLGRLAGRLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLGRPDPRPVRLRPTGRVRPAILLAAGMGGRAPPASGA
Ga0307407_1038662923300031903RhizosphereLRAGGRAAGEPLGRLAARLAVLQVTIYLVQELIERAAAGIPLGGPVDERLLLAGIAVQLLVATGLALGLAWAGRVAEVAGRALRRRRPARPDPRPARFRPTGWVRPAILLAAGLGGRAPPALPA
Ga0307412_1014454213300031911RhizosphereGSGHAYWSAAIAAAIVLGLVSLGTTLARSFDAGLRPGDRPPGEPLGRLAGRLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLGRPDPRPVRLRPTGRVRPAILLAAGMGGRAPPASGA
Ga0307409_10009345813300031995RhizosphereIAAAIVLGLASLGATLARSFRAGLRPEGRPAREPLERLVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALAIGLAWAGRVAEVAGRALRRRGLQRADHRPARLRPAGWVRPAILLAAGLGGRAPPTHLAR
Ga0307409_10162357623300031995RhizosphereRPAGEPPGRLAARLALLQVTIYLVQELIERLAAGVPLWGPVDGRLLLVGVAVQLLVATGLALALAWAGRVAEVAGRALRRRRAARPERGHRRPRPTAWVRPAILLAAGLGGRAPPSWAR
Ga0307416_10025816933300032002RhizosphereLGLASLGATLARSFRAGLTTGSRPAGDPPGRLAARLAVLQVTLYRVQELIERAAAGVPVVSPVDGRLLLAGIAVQLLVATGLAIGLAWAGRVAEVAGRALRRRLRVRPDSRPARLRPTGWVRPAILLAAGLGGRAPPPIWAR
Ga0307416_10113049213300032002RhizosphereGSLGATLARSFRAGLRPGGRPAGEPLGRLAARLALLQVTIYLVQELIERLAAGVPLWPVDGRLLLTGVTVQLLVAAGLALALAWAGRVAEVAGRALRRRRAARPGRGHRRPRPIGWVRPAILLAAGLGGRAPPALAA
Ga0307416_10131289313300032002RhizosphereRLAVLAGSGHAYWSAAIAAAIVLGLASLGATLARSFRDGLRPEGRPAPEPLERLVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRLQRPDHRPARLRPAGWVRPAILLAAGLGGRAPPAHLAR
Ga0307411_1009731713300032005RhizosphereSGHAYWSAAIAAAIVLGLASLGATLARSFRAGLRPEGRPAPEPLERLVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRPQRADHRPARLRPAGWVRPAILLAAGLGGRAPPTHLAR
Ga0307411_1030079533300032005RhizosphereAGEPLGRLAARLALLQVTIYLVQELIERLAAGVPLWGPVDGRLLLTGVTVQLLVAAGLALALAWAGRVAEVAGRALRRRRAARPGRGHRRPRPIG
Ga0326721_1004270613300032080SoilRHFRAGLRAGGRPAAEPLGRLVARLALLQITIYLVQELIERAAAGVPLGGPVDGRLLFTGIAVQLLVAGVLALGLAWAGRVAEVAGRALRRRRLHRPDLRPARLRPTGWVRPAILLAAGLGGRAPPAPAA
Ga0307415_10002230413300032126RhizosphereRAGLRPEGRPAPEPLERLVARLALLQVTIYLVQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAGALALGLAWAGRVAEVAGRALRRRRPQRADHRPARLRPAGWVRPAILLAAGLGGRAPPTHLAR
Ga0307415_10010551413300032126RhizosphereELIERAAAGVPVVSPVDGRLLLAGIAVQLLVATGLAIGLAWAGRVAEVAGRALRRRLRVRPDSRPARLRPTGWVRPAILLAAGLGGRAPPPIWAR
Ga0307415_10036275313300032126RhizospherePLGRLAGRLALLQVTIYLLQELIERAAAGVPLGGPVNGRLLLTGIAVQLLVAAVLALGLAWAALVAEVAGRALRRRRRHRPDPRPAPLRPSGRVRPAILLAAGMGGRAPPAIWAR
Ga0334913_035663_8_2653300034172Sub-Biocrust SoilVPLGGPVNARLLLTGIGAQLVVAAALALVLASAGRVAEVAGRVLRRHLPRPHPRRPHLRPTGWVRPAILLAAGLGGRAPPAIWAR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.