Metagenome Family F094479

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F094479
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	52 residues
Representative Sequence	LANRELDILRDALREHVNALAVDIGPRTPSIPDSLVRAANYIHSVFEDAG
Number of Associated Samples	103
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.23 %
% of genes near scaffold ends (potentially truncated)	94.34 %
% of genes from short scaffolds (< 2000 bps)	94.34 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (56.604 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.151 % of family members)
Environment Ontology (ENVO)	Unclassified (28.302 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.509 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94. 1INPgaii200_09474041 2INPhiseqgaiiFebDRAFT_1054378243 3JGI11643J12802_113243292 4JGI10216J12902_1102687561 5Ga0052254_11452521 6Ga0062593_1029725331 7Ga0062589_1003754541 8Ga0062595_1017683621 9Ga0069718_154113141 10Ga0070670_1022597491 11Ga0066388_1000989853 12Ga0068868_1007199641 13Ga0070709_112765661 14Ga0070705_1019072901 15Ga0070697_1012735032 16Ga0066905_1005810501 17Ga0068861_1019389831 18Ga0068870_107501021 19Ga0068862_1005933601 20Ga0075023_1001557422 21Ga0075029_1004547452 22Ga0075015_1001802341 23Ga0070715_101929471 24Ga0075014_1000226102 25Ga0075526_10013981 26Ga0075421_1022601811 27Ga0075425_1029962382 28Ga0075435_1015897091 29Ga0105250_102122572 30Ga0105245_110037942 31Ga0075418_110782661 32Ga0111538_103944223 33Ga0075423_125981931 34Ga0105085_10888561 35Ga0134128_126363162 36Ga0105239_130990861 37Ga0134127_132778981 38Ga0134122_124603162 39Ga0137374_101454491 40Ga0157329_10187402 41Ga0157308_102875761 42Ga0157306_100045026 43Ga0157306_101811292 44Ga0157298_103546691 45Ga0164298_109716561 46Ga0164301_110262092 47Ga0164309_109834302 48Ga0164309_114771311 49Ga0164307_116485611 50Ga0164305_102963062 51Ga0164305_105321541 52Ga0163162_117043171 53Ga0157375_123898822 54Ga0163163_133028682 55Ga0132256_1001176135 56Ga0182032_117133581 57Ga0187785_107626962 58Ga0187787_100412371 59Ga0184609_102915761 60Ga0190270_133287222 61Ga0190271_111338962 62Ga0247786_10548961 63Ga0247789_10786262 64Ga0209431_112294972 65Ga0207697_103764521 66Ga0207656_101607442 67Ga0209341_102873791 68Ga0207707_109511882 69Ga0207663_110108491 70Ga0207646_106488412 71Ga0207650_113469841 72Ga0207644_114679341 73Ga0207686_106318342 74Ga0207670_104764972 75Ga0207669_107416962 76Ga0207704_111623352 77Ga0207691_112470652 78Ga0207668_102591451 79Ga0207640_115224352 80Ga0207648_110338711 81Ga0207676_103214552 82Ga0257159_10804041 83Ga0257156_10193961 84Ga0208324_11279041 85Ga0209481_107356981 86Ga0209820_11959023 87Ga0268265_103628333 88Ga0247820_105667191 89Ga0247824_103319151 90Ga0299907_113071562 91Ga0268386_107188152 92Ga0310886_108563561 93Ga0307436_11231942 94Ga0318555_106742391 95Ga0315535_11185551 96Ga0306917_104881673 97Ga0310907_101306281 98Ga0310904_110029021 99Ga0310885_101634172 100Ga0310909_102940951 101Ga0214473_101285161 102Ga0310897_102383322 103Ga0310902_109972331 104Ga0310890_115224221 105Ga0310914_116820531 106Ga0373908_132186_3_188
Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94. 1INPgaii200_09474041 2JGI11643J12802_113243292 3JGI10216J12902_1102687561 4Ga0052254_11452521 5Ga0062589_1003754541 6Ga0062595_1017683621 7Ga0066388_1000989853 8Ga0068868_1007199641 9Ga0070709_112765661 10Ga0066905_1005810501 11Ga0068861_1019389831 12Ga0075023_1001557422 13Ga0075526_10013981 14Ga0075421_1022601811 15Ga0075425_1029962382 16Ga0105245_110037942 17Ga0134122_124603162 18Ga0157308_102875761 19Ga0164298_109716561 20Ga0164301_110262092 21Ga0187785_107626962 22Ga0187787_100412371 23Ga0190270_133287222 24Ga0209341_102873791 25Ga0207669_107416962 26Ga0207676_103214552 27Ga0209481_107356981 28Ga0247824_103319151 29Ga0299907_113071562 30Ga0307436_11231942 31Ga0306917_104881673 32Ga0310909_102940951 33Ga0214473_101285161 34Ga0310914_116820531
Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50 1Ga0070697_1012735032 2INPhiseqgaiiFebDRAFT_1054378243 3JGI11643J12802_113243292 4Ga0052254_11452521 5Ga0062589_1003754541 6Ga0062595_1017683621 7Ga0066388_1000989853 8Ga0068868_1007199641 9Ga0070709_112765661 10Ga0075023_1001557422 11Ga0075015_1001802341 12Ga0075526_10013981 13Ga0105250_102122572 14Ga0075423_125981931 15Ga0105085_10888561 16Ga0164298_109716561 17Ga0164301_110262092 18Ga0164307_116485611 19Ga0163163_133028682 20Ga0182032_117133581 21Ga0187785_107626962 22Ga0187787_100412371 23Ga0190270_133287222 24Ga0247786_10548961 25Ga0209431_112294972 26Ga0207669_107416962 27Ga0257159_10804041 28Ga0257156_10193961 29Ga0209481_107356981 30Ga0209820_11959023 31Ga0299907_113071562 32Ga0307436_11231942 33Ga0318555_106742391 34Ga0315535_11185551 35Ga0306917_104881673 36Ga0214473_101285161
Powered by MSAViewer

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.56% β-sheet: 0.00% Coil/Unstructured: 47.44%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
WebGL does not seem to be available. This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser. For a list of supported browsers, refer to http://caniuse.com/#feat=webgl. Load File(s)

Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00480	ROK	23.58
PF00484	Pro_CA	5.66
PF07681	DoxX	5.66
PF00248	Aldo_ket_red	4.72
PF02586	SRAP	2.83
PF04389	Peptidase_M28	2.83
PF00106	adh_short	1.89
PF04343	DUF488	1.89
PF13683	rve_3	0.94
PF01887	SAM_HAT_N	0.94

Showing 1 to 10 of 18 entries

Previous1 2Next

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	47.17
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	5.66
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	5.66
COG4270	Uncharacterized membrane protein	Function unknown [S]	5.66
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	2.83
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	1.89
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.94
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.94
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.94
COG1912	Stereoselective (R,S)-S-adenosylmethionine hydrolase (adenosine-forming)	Defense mechanisms [V]	0.94

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.60 %
Unclassified	root	N/A	43.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.60 %
Unclassified	root	N/A	43.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.60 %
Unclassified	root	N/A	43.40 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.47 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.77 %
Unclassified	root	N/A	43.40 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.26 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %
Unclassified	root	N/A	43.40 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.94 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.49 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.94 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.94 %
Unclassified	root	N/A	43.40 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.94 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.94 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.94 %
Unclassified	root	N/A	43.40 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	0.94 %

Name	Rank	Taxonomy	Distribution
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.94 %
Methylotuvimicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylotuvimicrobium	0.94 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.94 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.94 %
Unclassified	root	N/A	43.40 %
Variibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter	0.94 %

Name	Rank	Taxonomy	Distribution
Methyloceanibacter marginalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	0.94 %
Methylotuvimicrobium kenyense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylotuvimicrobium → Methylotuvimicrobium kenyense	0.94 %
Sandaracinaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae	0.94 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.94 %
Unclassified	root	N/A	43.40 %
Variibacter gotjawalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	0.94 %

Name	Rank	Taxonomy	Distribution
Methyloceanibacter marginalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	0.94 %
Methylotuvimicrobium kenyense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylotuvimicrobium → Methylotuvimicrobium kenyense	0.94 %
Sandaracinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus	0.94 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.94 %
Unclassified	root	N/A	43.40 %
Variibacter gotjawalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	0.94 %

Name	Rank	Taxonomy	Distribution
Methyloceanibacter marginalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	0.94 %
Methylotuvimicrobium kenyense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylotuvimicrobium → Methylotuvimicrobium kenyense	0.94 %
Sandaracinus amylolyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	0.94 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.94 %
Unclassified	root	N/A	43.40 %
Variibacter gotjawalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	0.94 %

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0947404	Not Available	549	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105437824	Not Available	560	Open in IMG/M
3300000890\|JGI11643J12802_11324329	All Organisms → cellular organisms → Bacteria → Proteobacteria	1690	Open in IMG/M
3300000956\|JGI10216J12902_110268756	Not Available	611	Open in IMG/M
3300003152\|Ga0052254_1145252	Not Available	618	Open in IMG/M
3300004114\|Ga0062593_102972533	Not Available	542	Open in IMG/M
3300004156\|Ga0062589_100375454	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300004479\|Ga0062595_101768362	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300004481\|Ga0069718_15411314	All Organisms → cellular organisms → Bacteria → Proteobacteria	917	Open in IMG/M
3300005331\|Ga0070670_102259749	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M

Showing 1 to 10 of 106 entries

Previous1 2 3 4 5…11Next

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	0.94%
Environmental	Environmental	67.92%
Host-Associated	Host-Associated	31.13%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	9.43%
Bioremediation	Engineered → Bioremediation	0.94%
Plants	Host-Associated → Plants	31.13%
Terrestrial	Environmental → Terrestrial	58.49%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	2.83%
Marine	Environmental → Aquatic → Marine	1.89%
Metal	Engineered → Bioremediation → Metal	0.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.92%
Roots	Host-Associated → Plants → Roots	0.94%
Sediment	Environmental → Aquatic → Sediment	4.72%
Soil	Environmental → Terrestrial → Soil	58.49%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.26%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.89%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.94%
Loam	Environmental → Terrestrial → Soil → Loam	11.32%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%
Sand	Environmental → Terrestrial → Soil → Sand	0.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.72%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.89%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.49%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.77%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.94%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.89%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.89%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.89%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.94%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.94%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.94%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.94%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.94%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.60%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.94%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	0.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.94%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.94%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.94%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.77%

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003152	Freshwater sediment microbial communities from Loktak Lake, India	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M

Showing 1 to 10 of 103 entries

Previous1 2 3 4 5…11Next

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_09474041	2228664022	Soil	MADSELEILREALREHVNALAVEIGPRTPSDPNSLVRAA
INPhiseqgaiiFebDRAFT_1054378243	3300000364	Soil	MADSELEILREALREHVNALAVEIGPRTPSDPNSLVRAANYIH
JGI11643J12802_113243292	3300000890	Soil	LADRELDILRDTLREHVGALTVDIGPRTPSTSNSLLRAANYIHSVFENAG
JGI10216J12902_1102687561	3300000956	Soil	LADRELELVRDALREHVNALAVDIGPRTPLNDDSLVRTANYI
Ga0052254_11452521	3300003152	Sediment	LADRELQVLKDALREHVNALAVDIGPRTPSSPDSLVRAANYIHSALEEAGL
Ga0062593_1029725331	3300004114	Soil	MADSELEILREALREHVNALAVDIGPRTSSDPNSLVRAANYIHSVF
Ga0062589_1003754541	3300004156	Soil	VGGRDLETIRDSLREHVNALAVDIGPRTPLNDNSLVRAANYIHSVFEDAGLSVTEQA
Ga0062595_1017683621	3300004479	Soil	VYSELYALQNTLREHVHAFAVDIGPRTLFNPSSLARAANYIRSVLECAGLSVSEQNYEYYGQQ
Ga0069718_154113141	3300004481	Sediment	LANRELDILGDALREHVNALAVDIGPRTPSIPDSLVRAANYIHSVFE
Ga0070670_1022597491	3300005331	Switchgrass Rhizosphere	LANRELDILGDALREHVNALAVDIGPRTPSIPDSLVRAANYIHS
Ga0066388_1000989853	3300005332	Tropical Forest Soil	LADRELKGLQAVLREHVDALAVHIGSRTPSKHGISVRAGNYVHSVFKDAGLSVREQNYQ*
Ga0068868_1007199641	3300005338	Miscanthus Rhizosphere	LIDNELEILRDALREHVSALAIDIGPRTTVDGNSLVLAADYIHSVFEEAGLSVTRQDYQY
Ga0070709_112765661	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LGLTAKSELEILREALREHVNALAVDVGPRAPSIPDSLVRAANYIHSVFEDAGLSVKEQNYKYHDQRVTNVLATAPGDTSASTY
Ga0070705_1019072901	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VGGRDLETIRDSLREHVNALAVDIGPRTPLNDNSLVRAANYIHSVFEDAGLSVTEQAYQILCPVGDE
Ga0070697_1012735032	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LANRELDILRDALREHVNALAVDIGPRTPSIPDSLVRAANYIHSVFEDAG
Ga0066905_1005810501	3300005713	Tropical Forest Soil	LADRELDILRDALREHVKALAADIGPRTPSNPDSLV
Ga0068861_1019389831	3300005719	Switchgrass Rhizosphere	VGGRDLETIRDSLREHVNALAVDIGPRTPLNDNSLVRA
Ga0068870_107501021	3300005840	Miscanthus Rhizosphere	LANRELDILGDALREHVNALAVDIGPRTPSLPDSLVRAANYIHSVFEDAGLTVSEED
Ga0068862_1005933601	3300005844	Switchgrass Rhizosphere	LANRELDILRDALRGHVNALAVDIGPRTPSIPDSLVR
Ga0075023_1001557422	3300006041	Watersheds	MANSELEILRQALQEHVHALAVDIGPRTPSIPDNLVRAANYIHSVLEDAGLS
Ga0075029_1004547452	3300006052	Watersheds	MANSELEILRQVLQEHVHALAVDIGPRTPSIPDSLVRAANYIHSVFEDAGLSVRGQM*
Ga0075015_1001802341	3300006102	Watersheds	LADRELEILRDTLREHVGALAADIGPRTPSSPDSLVRAANYIHSV
Ga0070715_101929471	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LGDRELEILQDALREHVNALAVDIGPRTPSIPDSLVRAANYIHSVFEDAGLTVSEQ
Ga0075014_1000226102	3300006174	Watersheds	MANSELEILRQALQEHVHALAVDIGPRTPSIPDSLVRAANYIHSVFEDAGLSVRGQM*
Ga0075526_10013981	3300006635	Arctic Peat Soil	LADRELEILRDALREHVNALAVDIGPRSPLNGDSLVRAANYIRSVLEQAGLSVREQDYQY
Ga0075421_1022601811	3300006845	Populus Rhizosphere	LIDRDLEILREALREHVSALAIDIGPRTPVNGNSLVIAANYIHSVFEDAGLSVTRQDYQYYGQRVTNVLGTLPVDT
Ga0075425_1029962382	3300006854	Populus Rhizosphere	LINNELEILRDALREHVSALAIDIGPRTTVNGNSLVLAADYI
Ga0075435_1015897091	3300007076	Populus Rhizosphere	LADHELELVRDALREHVNALAVDIGPRTPLNDDSLVRTAN
Ga0105250_102122572	3300009092	Switchgrass Rhizosphere	LADRELETLRDALREHVNALAVDIGPRAPLDPNSLVRAADYIHSVFEDAGLSVRE
Ga0105245_110037942	3300009098	Miscanthus Rhizosphere	LANRELDILRDALHEHVNALAVDIGPRAPSIPDSLVRAANYIH
Ga0075418_110782661	3300009100	Populus Rhizosphere	LANRELDILSDALREHVNALAVDIGPRTPSIPDSLVRAANYIHL
Ga0111538_103944223	3300009156	Populus Rhizosphere	LIDRDLEILREALREHVSALAIDIGPRTPVNGNNLVIAANYIHSVFEDAGLSVTRQDYQYYGQRVT
Ga0075423_125981931	3300009162	Populus Rhizosphere	LIDRDLEILREALREHVSALAIDIGPRTPVNGNSLVIAANYIHSVFENAGLSVTRQDYQYYGQRVT
Ga0105085_10888561	3300009820	Groundwater Sand	LADRELEILRNALREHVNALAVDIGPRTPLNRDSLVRAANYIHSVFEEAGLSVREQD
Ga0134128_126363162	3300010373	Terrestrial Soil	LADRELEILRDALREHVSALAVDIGPRTPSLPDSLVRAANYIHSVFEDAGLSV
Ga0105239_130990861	3300010375	Corn Rhizosphere	LADRELEILRDALREHVSALAVDIGPRTPSVPDSLVRAANYIHS
Ga0134127_132778981	3300010399	Terrestrial Soil	LANRELDILSDALREHVNALAVDIGPRTPSIPDSLVRAANYIHS
Ga0134122_124603162	3300010400	Terrestrial Soil	LADRELETLRNALREHVNALAVDIGPRTPLDPNSLVRAADYIHSVFE
Ga0137374_101454491	3300012204	Vadose Zone Soil	LAYRELEILRDALREHVNALAVDIGPRTPSSPDSLVRAANYIHSVFEDAGLSV
Ga0157329_10187402	3300012491	Arabidopsis Rhizosphere	LADRELEILRDALREHVSALAVDIGPRTPSSPDSLVRAANYIHSVFE
Ga0157308_102875761	3300012910	Soil	MADSELEILREALREHVNALAVDIGPRTSSDLNSYIHSVFE
Ga0157306_100045026	3300012912	Soil	LIDNELEILRDALREHVSALAIDIGPRTTVNGNSLVLAADYIHSVFEE
Ga0157306_101811292	3300012912	Soil	LADRELETLRNALREHVNALAVDIGPRTPLDPNSLVRAADYIHSVFEDAGLSVRE
Ga0157298_103546691	3300012913	Soil	LADREPETLRNALREHVNALAVDIGPRTPLDPNSLVRAADYIHSVFEDAGLSVREQ
Ga0164298_109716561	3300012955	Soil	LANRELDILRDALHEHISPLAVDIDPRAPSIPDSLVRAANYIHSVFEDAGLTVSEQNYDCYNQRVTNLLGTVPASA
Ga0164301_110262092	3300012960	Soil	MPRPLLERSELDILRDALREHINALAVDIGPRTPSSPGSLVRAANYIHSVFEDAGLSVR
Ga0164309_109834302	3300012984	Soil	LANRELDILRDALREHVNALAVDIGPRTPSIPDSLVRAANYIHSVFEEAGLTVCEQDYDYYDQ
Ga0164309_114771311	3300012984	Soil	LVNRELDILRDALREHVSALAVDIGPRTPVDGNNLVRAANYIHSIFEE
Ga0164307_116485611	3300012987	Soil	MADRELETLREALREHVNALAVDIGPRTPSDPNSLARAANYVHSVFEDAGFS
Ga0164305_102963062	3300012989	Soil	LADRELEILRDALREHVSALAVDIGPRTPSVPDSLVRAANYIHSVFEDAGLSVREQNYQY
Ga0164305_105321541	3300012989	Soil	LFDREPDILRGALREHVKALAVDIGPRTLSNPGSL
Ga0163162_117043171	3300013306	Switchgrass Rhizosphere	LAGRELDILRDALREHVKALAVDIGPRTPSTPDSLVRAANYITSVFEDAGLS
Ga0157375_123898822	3300013308	Miscanthus Rhizosphere	LANRELDILRDALREHVNALAVDIGPRTPSIPDSLVRAANYIQSVFEDAGLTVSEQDYDY
Ga0163163_133028682	3300014325	Switchgrass Rhizosphere	LADHELELVRDALREHVNALAVDIGPRTPLNDDSLVRTANYIHSVFEE
Ga0132256_1001176135	3300015372	Arabidopsis Rhizosphere	LANRELDILRDALREHVNALAVDIGPRTASIPDSLVRAANY
Ga0182032_117133581	3300016357	Soil	MPRTKLGPGELDILRDALYEHVKALAVDIGPRTPMSPGSLVRAANYIHSVFEDAG
Ga0187785_107626962	3300017947	Tropical Peatland	VADREIEVLRELLREHVNALAVDIGPRTPLNADSLVRAAK
Ga0187787_100412371	3300018029	Tropical Peatland	MANSELEILREALREHVNALAVDIGPRTTSIPGSLVRAANYIHSVFEDAGLAIREQNYQYRDQRV
Ga0184609_102915761	3300018076	Groundwater Sediment	LADRELDILRDALHEHVNALAVDIGPRAPSIPDSLVRAANYIHSVFEDAG
Ga0190270_133287222	3300018469	Soil	LTHRERAILRDALREHVKALAIDIGPRTPLNGDSLVRAANYIHSVFEEAGLPVRE
Ga0190271_111338962	3300018481	Soil	LANRELDILRDALREHVNALAVDIGPRTPSIPDSLVRAANYIHSVFEDAGLTVSEQ
Ga0247786_10548961	3300022883	Soil	VADRELETLRDSLREHVNALAVDIGPRTPLQRDSLVHAANYIYSVFEES
Ga0247789_10786262	3300023266	Soil	LIDNELEILRAALREHVSALAIDIGPRTTVDGNSLVL
Ga0209431_112294972	3300025313	Soil	LADSELEILRDALREHVKALAVDIGSRTPLNRDSLVRAADYIQSVFEEAGLSVREQDYQY
Ga0207697_103764521	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	LIDNELEILRDALREHVSALAIDIGPRTTVDGNSLVLAADYIHSVFEEAGLSVTRQDYQYYD
Ga0207656_101607442	3300025321	Corn Rhizosphere	LIDNELEILRDALREHVSALAIDIGPRTTVDGNSLVLAADYIHSV
Ga0209341_102873791	3300025325	Soil	LADREIKIVRDSLRGHVKALAVDIGPRTPFTGDSL
Ga0207707_109511882	3300025912	Corn Rhizosphere	LIDNELEILRDALREHVSALAIDIGPRTTVDGNSLVLAADYIHSVFEEAGLS
Ga0207663_110108491	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LGDRELEILQDALREHVNALAVDIGPRTPSIPDSLVRAANYIHSVFEDAG
Ga0207646_106488412	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LIDNELEILRAALREHVSALAIDIGPRTTVDGNSLVLAADYIHSVF
Ga0207650_113469841	3300025925	Switchgrass Rhizosphere	LADRELETLRNALREHVNALAVDIGPRTALDPNSLVRAADYIHSV
Ga0207644_114679341	3300025931	Switchgrass Rhizosphere	LADRELETLRNALREHVNALAVDIGPRTPLDPNSLVRAADYIHSVFEDA
Ga0207686_106318342	3300025934	Miscanthus Rhizosphere	LANRELDILRDALREHVNALAVDIGSRTPSIPDSLVRAGNYIHSVFEDAGLSV
Ga0207670_104764972	3300025936	Switchgrass Rhizosphere	LIDNELEILRDALREHVSALAIDIGPRTTVDGNSLVLAADYIHSVFEEAGLSVTRQDYQYYDHRVTNV
Ga0207669_107416962	3300025937	Miscanthus Rhizosphere	LRDHELEILREALREHVNALAVDIGPRTPLTSDSLVRTQ
Ga0207704_111623352	3300025938	Miscanthus Rhizosphere	LIDNELEILRAALREHVSALAIDIGPRTTVDGNSLVLAADYIHSVFEEAGLS
Ga0207691_112470652	3300025940	Miscanthus Rhizosphere	VGGRDLETIRDSLREHVNALAVDIGPRTPLNDNSLVRAANYIHSV
Ga0207668_102591451	3300025972	Switchgrass Rhizosphere	LANRELDILRDALREHVNALAVDIGPRTPSIPDSLVRAAN
Ga0207640_115224352	3300025981	Corn Rhizosphere	LANRELDILRDALHEHVNALAVDIGPRAPSIPDSLVRAANYIHSVFEDAGLTVSEQNYDCYNQRVTNLLGTV
Ga0207648_110338711	3300026089	Miscanthus Rhizosphere	LANRELDILRDALREHVNALAVDIGPRTPSIPDSLVRAANYIHSVFEDAGLTVS
Ga0207676_103214552	3300026095	Switchgrass Rhizosphere	LADRELETLRNALREHVNALAVDIGPRTPLDPNSLVRAADYIHSVFEDAGLSVREQTTNIMISA
Ga0257159_10804041	3300026494	Soil	MPRTLFGQSELDILPDALREHVNAFAVDIGPRTPSSPGSLVRAANYIHSVFEDAGLSVREQDYEYYASA
Ga0257156_10193961	3300026498	Soil	LVNRELDILRDALREHVSALAVDIGPRTPVDGNNLVRAANYIHSIFEEAGLSVREQDYQY
Ga0208324_11279041	3300027604	Peatlands Soil	LADRELEILGDALREHVNALAVDIGPRTPSIPDSLVRAANYIHSVFEDVGLSV
Ga0209481_107356981	3300027880	Populus Rhizosphere	MPGRLSLALGPQGPLVKRDLEILPDALREHVNALAVDIGPRTPLNSDSLVRAANYIRSVFEEAGLSVREQD
Ga0209820_11959023	3300027956	Freshwater Sediment	LDDRELEILRAALHEHVNALAVDIGPRTPLNSDSLVRAANYIRSVFEEAGLSV
Ga0268265_103628333	3300028380	Switchgrass Rhizosphere	LANRELDILRDALREHVNALAVDIGPRTPSIPDSLVRAANYIH
Ga0247820_105667191	3300028597	Soil	LANRELDILRDALREHVNALAVDIGPRTPSIPDSLVRAANYIHSVFEDAGLTVCEQDYDYYYQRVTNLLGTVPA
Ga0247824_103319151	3300028809	Soil	LANRELDILRDALREHVNALAVDIGPRAPSIPDSLVRAANYIHSVFEDAGLIVSEQNYDCYN
Ga0299907_113071562	3300030006	Soil	LGDRELENLRGALRGHVKALASDIGPRTPFIGDSLTRA
Ga0268386_107188152	3300030619	Soil	LAHREREILRDALREHVKALAVDIGPRTPLNGDSLVRAANYIHSVFD
Ga0310886_108563561	3300031562	Soil	LIDNELEILRDALREHVSALAIDIGPRTTVNGNSLVLAADYIHSVFEEAGLSVTRQDYQYYDHRVTNVLGTL
Ga0307436_11231942	3300031563	Salt Marsh	LGDGELEIVRNALRAHVEALAVDIGPRTPFSTNSLERAAT
Ga0318555_106742391	3300031640	Soil	LAKRELEILRTALREHVNALTVDIGSRTPLNGNSLVRAANYIHSVFEEASLSVREQDYAY
Ga0315535_11185551	3300031699	Salt Marsh Sediment	VDRELEILRDALHEHVNALAVDIGPRSPSDPNALVRAANYVHSVFEDAGLS
Ga0306917_104881673	3300031719	Soil	LADNELKVLRDALGEHVNALAVDIGPRTPASPDTLVRAGNYLHSVFEDAGLSVTEQDYQYYDQRV
Ga0310907_101306281	3300031847	Soil	LANRELDILRDALREHVNALAVDIGPRTPSIPDSLVRAA
Ga0310904_110029021	3300031854	Soil	LADRELETLRNALREHVNALAVDIGPRTPLDPNSLVRAADYI
Ga0310885_101634172	3300031943	Soil	LVNRELDILRDALREHVNALAVDIGPRTPSIPDSLVRAANYIHSVFEDAGLTV
Ga0310909_102940951	3300031947	Soil	MPRTKPGPSELDILRDALYEHVKALAVDIGPRTPTSPGSLVRAANYIH
Ga0214473_101285161	3300031949	Soil	MADSEVEILRDALREHVKALAVDIESRTPSNRDSLVRAANYIHS
Ga0310897_102383322	3300032003	Soil	LIDNELEILRDALREHVSALAIDIGPRTTVDGNSLVLAADYIHSVFEEAGLSV
Ga0310902_109972331	3300032012	Soil	LIDNELEILRDALREHVSALAIDIGPRTPVNGNSLVLAADYIHSVFEEAGLSVTRQD
Ga0310890_115224221	3300032075	Soil	LADRELETLRNALREHVNALAVDIGPRTPLDPNSLVRAA
Ga0310914_116820531	3300033289	Soil	MPRTKPGPSELDILRDALYEHVKALAVDIGPRTPTSPGSLVRAANYIHSVFEDAGLSVREQNYHYDDQRVR
Ga0373908_132186_3_188	3300034085	Sediment Slurry	MANRELDILRDALREHVNALAVDIGPRTPSIPDSLVRAANYIHSVFEDAGLTVSEQDYDYYD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters