NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F094359

Metagenome Family F094359

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F094359
Family Type Metagenome
Number of Sequences 106
Average Sequence Length 78 residues
Representative Sequence MSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELRYAYRGSPLVPTLFASGVAGLAALGGVLLLRGAIRGRIAVRDPRGRP
Number of Associated Samples 87
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 22.86 %
% of genes near scaffold ends (potentially truncated) 34.91 %
% of genes from short scaffolds (< 2000 bps) 68.87 %
Associated GOLD sequencing projects 76
AlphaFold2 3D model prediction Yes
3D model pTM-score0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (85.849 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(18.868 % of family members)
Environment Ontology (ENVO) Unclassified
(45.283 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(77.358 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110
1MBSR1b_0752.00001060
2F14TC_1083280031
3JGI10216J12902_1064379402
4soilH2_100318032
5Ga0062589_1005319262
6Ga0062595_1000056352
7Ga0062592_1023084021
8Ga0070683_1000239007
9Ga0070670_1007675311
10Ga0070680_1011987332
11Ga0070660_1009587142
12Ga0070660_1017132142
13Ga0070661_1013865621
14Ga0070668_1022299861
15Ga0070671_1001257914
16Ga0070671_1020965012
17Ga0070674_1003933793
18Ga0070674_1016192912
19Ga0070688_1000991134
20Ga0070659_1000132601
21Ga0070710_107077122
22Ga0070711_1000616313
23Ga0070663_1004616241
24Ga0070678_1017892031
25Ga0068867_1000638424
26Ga0074259_113542061
27Ga0070695_1012296342
28Ga0070664_1015782041
29Ga0068854_1010781992
30Ga0066903_1023603102
31Ga0066903_1048704952
32Ga0068870_114050781
33Ga0075417_106646221
34Ga0082029_16047541
35Ga0075422_101343082
36Ga0075428_1001071604
37Ga0075421_1000089123
38Ga0075421_1005403072
39Ga0075421_1019934932
40Ga0075430_1001135673
41Ga0075433_100942152
42Ga0075429_1000665223
43Ga0075429_1015386831
44Ga0111539_104112502
45Ga0105245_101171241
46Ga0075418_113105012
47Ga0114129_1000554914
48Ga0114129_102211122
49Ga0114129_109890112
50Ga0111538_100869702
51Ga0075423_102015651
52Ga0105242_100492743
53Ga0105242_109266912
54Ga0105248_101436911
55Ga0105248_103449364
56Ga0157330_10164462
57Ga0164299_114973972
58Ga0164302_104506602
59Ga0164308_109981042
60Ga0164304_101736412
61Ga0164307_116158402
62Ga0157378_104632172
63Ga0157378_117834391
64Ga0163162_100809105
65Ga0157380_108202401
66Ga0182007_100986232
67Ga0132258_1003763710
68Ga0132258_101955357
69Ga0132256_1000089042
70Ga0132256_1000475514
71Ga0132256_1035461551
72Ga0132257_1020425683
73Ga0163161_105534481
74Ga0173481_106147081
75Ga0207697_100108316
76Ga0207642_102236502
77Ga0207680_102869513
78Ga0207707_108998872
79Ga0207662_100062397
80Ga0207650_104921781
81Ga0207690_105617893
82Ga0207686_108665242
83Ga0207670_102982672
84Ga0207669_102735111
85Ga0207691_112483401
86Ga0207703_116247563
87Ga0207678_102338121
88Ga0207702_117883802
89Ga0207648_100152145
90Ga0207648_105387814
91Ga0207648_108852611
92Ga0207674_101493564
93Ga0207683_107516192
94Ga0207698_120279823
95Ga0207428_105404091
96Ga0209382_100221347
97Ga0209382_113421151
98Ga0247828_105053251
99Ga0307408_1000294005
100Ga0307468_1014493392
101Ga0307406_101119073
102Ga0308175_1000307961
103Ga0308175_1003210152
104Ga0310884_109129431
105Ga0310903_106661502
106Ga0307471_1011812182
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 51.82%    β-sheet: 7.27%    Coil/Unstructured: 40.91%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

1020304050607080MSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELRYAYRGSPLVPTLFASGVAGLAALGGVLLLRGAIRGRIAVRDPRGRPCytopl.Extracel.Cytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.69
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
85.8%14.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Termite Nest
Soil
Sugarcane Root And Bulk Soil
Soil
Hardwood Forest Soil
Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
6.6%2.8%4.7%2.8%2.8%2.8%3.8%3.8%5.7%18.9%3.8%5.7%3.8%7.5%2.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
MBSR1b_0752.000010602162886012Miscanthus RhizosphereMSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
F14TC_10832800313300000559SoilMSQRTANLGPGLRVLLGVIGGPALGSGVVVAATELSAASRGSPLLPTLLASVVAGLAVLGGVLLIRGAVLGRI
JGI10216J12902_10643794023300000956SoilVLLGIVGTAAVGSGVVVTATELRSAYLGSPLVPTLLASLVAGLAALGGGLILRGAIRGRIAVRDPRGRT*
soilH2_1003180323300003324Sugarcane Root And Bulk SoilMMERVLGPGLRGLFGIVGVAALIAGIVVAATEVRLLFVGSPPIPTLLAAIVAGVAALGGGLVLRGAVRGRVAVRSPRGRRN
Ga0062589_10053192623300004156SoilMAERVLPSGLRVLVGLIGAAALGAGFVVAATELRYAYLGSPLLPTLLASVVASVVALGGAVLLRGAVRGRIAVRSPRRHRR*
Ga0062595_10000563523300004479SoilMSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0062592_10230840213300004480SoilVAERVLPSGLRVLVGLIGAAALGAGFVVAATELRYAYLGSPLLPTLLASVVASVVALGGAVLLRGAVRGRIAVRSPRRHRS*
Ga0070683_10002390073300005329Corn RhizosphereMSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0070670_10076753113300005331Switchgrass RhizosphereLGPGLRVLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0070680_10119873323300005336Corn RhizosphereLSDEPHPPVPQRITSLGPGLRILLAIIGTAAVGSGIVVAATELRWAYLGSPVVPTLLASLVAGLAAVGGGLLIRGAIRGRIAVRDPRGRP*
Ga0070660_10095871423300005339Corn RhizosphereVPQRITSLGPGLRILLAIIGTAAVGSGIVVAATELRWAYLGSPVVPTLLASLVAGLAAVGGGLLIRGAIRGRIAVRDPRGRP*
Ga0070660_10171321423300005339Corn RhizosphereVPQRITSLGLGLRVLLAIIGAAALGSGVVVAATEIRYAYLGSPLVPTLLASGVAGLVTLGGVLLLRGAIRGRIPVRDPRGRR*
Ga0070661_10138656213300005344Corn RhizosphereARSSNADCFRLSDEPHPPVPQRITSLGPGLRILLAIIGTAAVGSGIVVAATELRWAYLGSPVVPTLLASLVAGLAAVGGGLLIRGAIRGRIAVRDPRGRP*
Ga0070668_10222998613300005347Switchgrass RhizosphereVVERDLGSGLRVLLGVVGAAALGAGLVVAGIELRYAYLGSPRVPTLIASLVAGLAALGGALLIRGAFRGRIAVRSPRRGRRQADGR*
Ga0070671_10012579143300005355Switchgrass RhizosphereMPQRITSLGPGLRALLAIIGLAALASGIVVAATELRYAYLGSPLMPTLLASGVAGLVTLGGVLLLRGAIRGRIAVRD
Ga0070671_10209650123300005355Switchgrass RhizosphereVPQRITSIGPGLRVILAVIGTAALGSGIVVAATELRYAYGGSPLVPTLLASGVASLAALGGVLLLRGAIRGR
Ga0070674_10039337933300005356Miscanthus RhizosphereVPQRITSLGPGLRVLLALTGTAALGSGIVVAATELRYAYRGSPLVPTLFASGVAGLAALGGVLLLRGAIRGRIAVRDPRGRP*
Ga0070674_10161929123300005356Miscanthus RhizosphereMPQRITSLGPGLRVLLAIIGLAALASGIVVAATELRYAYLGSPLMPTLLVSGVAGLVTLGGVLLLRGAIRGRIAVRDPRGRR*
Ga0070688_10009911343300005365Switchgrass RhizosphereMSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRV
Ga0070659_10001326013300005366Corn RhizosphereLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0070710_1070771223300005437Corn, Switchgrass And Miscanthus RhizosphereMPQRTVDLGPGLRIVLAMIGVAALVSGIVVAATGLRSAHLGSPLVPTLLAALVAGLAAVGGGLLLRGAILGRIAVRDPRGRT*
Ga0070711_10006163133300005439Corn, Switchgrass And Miscanthus RhizosphereMPQRTVDLGPGLRIVLAIIGVAALVSGIVVAATGLRSAHLGSPLVPTLLAALVAGLAAVGGGLLLRGAILGRIAVRDPRGRT*
Ga0070663_10046162413300005455Corn RhizosphereRVLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0070678_10178920313300005456Miscanthus RhizosphereVVERDLGFGLRVLLGVVGAAALGAGLVVAGIELRYAYLGSPRVPTLVASLVAGLAALGGALLIRGAFRGRIAVRSPRR
Ga0068867_10006384243300005459Miscanthus RhizosphereVPQRITSLGPGLRVLLALTGTAALGSGIVVAATELRYAYGGSPLVPTLLASGVASLAALGGVLLLRGAIRGRIAVRDPRGRP*
Ga0074259_1135420613300005507Arabidopsis RhizosphereRTANLGPGLRVLLGIIGTAALGSGVVVTATELRSAYGGAPLVPTVLAALVAGLAALGGGLILRGAIRGRIAVRDPRGRR*
Ga0070695_10122963423300005545Corn, Switchgrass And Miscanthus RhizosphereMSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVGGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0070664_10157820413300005564Corn RhizosphereGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0068854_10107819923300005578Corn RhizosphereSGVVVAATQIRSGSLSSAPLRTSLVVLVAGLAAVGGGLLLRGAIRGRIPVRDPRGRR*
Ga0066903_10236031023300005764Tropical Forest SoilMPPRATSLGPGLRVLLAIIGMAALGSGIIVAATELRYAHRGSPLVPTLLATGVAGLAAVGGVLLLRGAIRGRIPVRDPRGRT*
Ga0066903_10487049523300005764Tropical Forest SoilVPQRITSLGPGLRVLLAVIGTVALGSGIVVAATELRSAYLGSPLLPTLLASAVAGFAAVGGVLLLRGAIRGRIAVRDPTGRT*
Ga0068870_1140507813300005840Miscanthus RhizosphereSRVVERDLGSGLRVLLGVVGAAALGAGLVVAGIELRYAYLGSPLVPTLAASLVASLAALGGALLIRGAFRGRIAVRSPRRGRRQADER*
Ga0075417_1066462213300006049Populus RhizosphereVLLGVIGVAALGSGVVVAATELSAASRGSPLLPTLLASVVAGLAVLGGVLLIRGAVLG
Ga0082029_160475413300006169Termite NestMERPLSRGLRVLLAIVGAAALGSGLVVGATELRLAYLGSPVVPTLFVVVVAGLAAIGGSLLIRGAVRGRIAVRT
Ga0075422_1013430823300006196Populus RhizosphereVLLGIIGTAALGSGAVVTATELRSAYLGSPLVPTLLASLVASLAALGGGLILRGAIRGRIAVRDPRGRK*
Ga0075428_10010716043300006844Populus RhizosphereMSQRTANLGPGLRVLLGVIGVAALGSGVVVAATELSAASRGSPLLPTLLASVVAGVAVLGGVLLIRGAVLGRIAVRDPRGRR*
Ga0075421_10000891233300006845Populus RhizosphereMRERVLGSGLRVLIGVVGAAALGAGLIVGATELRYVYLGSPAVPAVLASLFAGVVALGGGVLLRGAIRGRIAVRSPRRDRA*
Ga0075421_10054030723300006845Populus RhizosphereVLLGVIGVAALGSGVVVAATELSAASRGSPLLPTLLASVVAGVAVLGGVLLIRGAVLGRIAVRDPRGRR*
Ga0075421_10199349323300006845Populus RhizosphereMPLRTANLGPGLRVLLGIIGTAALGSGAVVTATELRSAYLGSPLVPTLLASLVAAFAALGGGLILRGAIRGRIAVRDPRGRK*
Ga0075430_10011356733300006846Populus RhizosphereLIGVVGAAALGAGLIVGATELRYVYLGSPAVPAVLASLFAGVVALGGGVLLRGAIRGRIAVRSPRRDRA*
Ga0075433_1009421523300006852Populus RhizosphereVADRSLGPGLRLLIGIVGLSAIGAGLLVCVTELRLAYGGSPRVPTLIAAIVAGLAAVGGGLIVRGAIRGRIAVRDPRGKRHPTDSTTPRT*
Ga0075429_10006652233300006880Populus RhizosphereMSQRTANLGPGLRVLLGVIGVAALGSGVVVAATELSAASRGSPLLPTLLASVVAGLAVLGGVLLIRGAVLGRIAVRDPRGRR*
Ga0075429_10153868313300006880Populus RhizosphereMRERVLGSGLRVLVGVVGAAALGAGLIVGATELRYVYLGSPAVPAVLASLFAGVVALGGGVLLRGAIRGRIAVRSPRRDRA*
Ga0111539_1041125023300009094Populus RhizosphereVLLGIIGTAALGSGAVVTATELRSAYRGSPLVPTLLASLVAGLAALGGGLILRGAIRGRIAVRDPRGRK*
Ga0105245_1011712413300009098Miscanthus RhizosphereMSQRTANLGPGLRVLLGIIGTAALGSGFVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0075418_1131050123300009100Populus RhizosphereMPQHIANLGPGLRVLLGVIGTAALGSGAVVTATELRSAYRGSPLVPTLLASLVAGLAALGGGLILRGAIRGRIAVRDPRGRK*
Ga0114129_10005549143300009147Populus RhizosphereVADRSLGPGLRLLIGIVGLSAIGAGLLVCVTELRLAYLGSPRIPTLIAAMVAGMAAVGGGLIVRGAIRGRIAVRDPRGKRHPTDSTTPRT*
Ga0114129_1022111223300009147Populus RhizosphereVLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0114129_1098901123300009147Populus RhizosphereVLVGLIGAAALGAGLVVGATELRYAYLGLPLLPTLLASVVAAVVALGGGVLLRGAARGRITVRSPRRDRG*
Ga0111538_1008697023300009156Populus RhizosphereVLLGIIGTAALGSGAVVTATELRSAYLGSPLVPTLLASLVAAFAALGGGLILRGAIRGRIAVRDPRGRK*
Ga0075423_1020156513300009162Populus RhizosphereVLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPR
Ga0105242_1004927433300009176Miscanthus RhizosphereVPQRITSIGPGLRVILAVIGTAALGSGIVVAATELRYAYGGSPLVPTLLASGVASLAALGGVLLLRGAIRGRIAVRDPRGRP*
Ga0105242_1092669123300009176Miscanthus RhizosphereVLLAIIGLAALASGIVVAATELRYAYLGSPLMPTLLVSGVAGLVTLGGVLLLRGAIRGRIAVRDPRGRR*
Ga0105248_1014369113300009177Switchgrass RhizosphereMSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRITVRDPRGHRWDENA*
Ga0105248_1034493643300009177Switchgrass RhizosphereVLLAIIGAAALGSGVVVAATEIRYAYLGSPLVPTLLASGVAGLVTLGGVLLLRGAIRGRIPVRDPRGRR*
Ga0157330_101644623300012514SoilMSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGPRWDENA*
Ga0164299_1149739723300012958SoilVPQRITSLGPGLRVLLAVIGTAALGSGIIVAATELRYAYGGSPLVPTLLASGAAGLAALGGVLLLRGAIRGRIAVRDPRGRP*
Ga0164302_1045066023300012961SoilLLIGLIGAAALGAGLLVAATELRSAYHGSPPLPTVLAALVAGVVALGGGVLLRGAFRGRIAVRSPPGGGGHPHAH*
Ga0164308_1099810423300012985SoilVLLGIIGTAALGSGVVVSATELRSAYLGARLVPTLLASLVAGLAALGGGLILRGVIRGRIAVRDPRGRR*
Ga0164304_1017364123300012986SoilVPQRITSLGPGLRVLLAVIGTAALGSGIVVAATELRYAYGGSPLVPTLLASGAAGLAALGGVLLLRGAIRGRIAVRDPRGRT*
Ga0164307_1161584023300012987SoilVPQRITSLGPGLRVLLAVIGTAALGSGIIVAATELRYAYGGSPLVPTLLASGAAGLAALGGVLLLRGAIRGRIAVRDPRGRT*
Ga0157378_1046321723300013297Miscanthus RhizosphereVPQRITSIGPGLRVILAVIGTAALGSGIVVAATELRYAYGGSPLVPTLLASGVAGLAALGGVLLLRGAIRGRIAVRDPRGRP*
Ga0157378_1178343913300013297Miscanthus RhizosphereMPQRITSLGPGLRVLLAIIGLAALASGIVVAATELRYAYLGSPLMPTLLVSGVAGLVTLGGVLLLRGAIRGRI
Ga0163162_1008091053300013306Switchgrass RhizosphereMSQRTAYLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0157380_1082024013300014326Switchgrass RhizosphereVVERDLGSGLRVLLGVVGAAALGAGLVVAGIELRYAYLGSPRVPTLIASLVAGLAALGGALLIRGASRGRIAVRSPRRGRRQADGR*
Ga0182007_1009862323300015262RhizosphereVLIAIIGTAALGSGIVIAVTQIRSPYLGSAPVRTSLVLLVAGLAAFGGGLLVRGAIRGRILVRDPRGRT*
Ga0132258_10037637103300015371Arabidopsis RhizosphereVLLGIIGTAALGSGVVVTATELRSAYGGAPLVPTVLAALVAGLAALGGGLILRGAIRGRIAVRDPRGRR*
Ga0132258_1019553573300015371Arabidopsis RhizosphereVLLAVIGVAALGSGVVVVATELGAASRGSPLLPTLLASIVAGLAALGGVLLIRGAVRGRIAVRDPRGRR*
Ga0132256_10000890423300015372Arabidopsis RhizosphereMSPRTANLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0132256_10004755143300015372Arabidopsis RhizosphereVLIGVVGSAALGAGLIVGATELRDAYVGSAAVPTILASLVAGVVALGGAVLLRGAWRGRISVRSPRHDRR*
Ga0132256_10354615513300015372Arabidopsis RhizosphereVLLGVIGTAALGSGIIVAAMELRAASHGSPLAPTLLASIVAGLAALGGVLLIRGAVRGR
Ga0132257_10204256833300015373Arabidopsis RhizosphereMSQRTAILGPGLRVLLGVIGTAALGSGIIVAAMELRAASHGSPLAPTLLASIVAGLAALGGVLLIRGAV
Ga0163161_1055344813300017792Switchgrass RhizosphereMSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRD
Ga0173481_1061470813300019356SoilNLGPGLRVLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
Ga0207697_1001083163300025315Corn, Switchgrass And Miscanthus RhizosphereMSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
Ga0207642_1022365023300025899Miscanthus RhizosphereVPQRITSLGPGLRVLLALTGTAALGSGIVVAATELRYAYRGSPLVPTLFASGVAGLAALGGVLLLRGAIRGRIAVRDPRGRP
Ga0207680_1028695133300025903Switchgrass RhizosphereLGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
Ga0207707_1089988723300025912Corn RhizosphereVPQRITSLGPGLRILLAIIGTAAVGSGIVVAATELRWAYLGSPVVPTLLASLVAGLAAVGGGLLIRGAIRGRIAVRDPRGRP
Ga0207662_1000623973300025918Switchgrass RhizosphereMSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRITVRDPRGHRWDEN
Ga0207650_1049217813300025925Switchgrass RhizosphereLGPGLRVLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
Ga0207690_1056178933300025932Corn RhizosphereVLLAIIGAAALGSGVVVAATEIRYAYLGSPLVPTLLASGVAGLVTLGGVLLLRGAIRGRIPVRDPRGRR
Ga0207686_1086652423300025934Miscanthus RhizosphereVPQRITSIGPGLRVILAVIGTAALGSGIVVAATELRYAYGGSPLVPTLLASGVASLAALGGVLLLRGAIRGRIAVRDPRGRP
Ga0207670_1029826723300025936Switchgrass RhizosphereAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
Ga0207669_1027351113300025937Miscanthus RhizosphereMPQRITSLGPGLRVLLAIIGLAALASGIVVATTELRYAYLGSPLMPTLLVSGVAGLVTLGGVLLLRGAIRGRIAVRDPRGRR
Ga0207691_1124834013300025940Miscanthus RhizosphereVPQRITSLGLGLRVLLAIIGAAALGSGVVVAATEIRYAYLGSPLVPTLLASGVAGLVTLGGVLLLRGAIRGRIPVRDPRGRR
Ga0207703_1162475633300026035Switchgrass RhizosphereVLLAIIGAAALGSGVVVAATEIRYAYLGSPLVPTLLASGVAGLVTLGGVLLLRGAIRG
Ga0207678_1023381213300026067Corn RhizosphereLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
Ga0207702_1178838023300026078Corn RhizosphereMSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELRYAYRGSPLVPTLFASGVAGLAALGGVLLLRGAIRGRIAVRDPRGRP
Ga0207648_1001521453300026089Miscanthus RhizosphereVPQRITSLGPGLRVLLALTGTAALGSGIVVAATELRYAYGGSPLVPTLLASGVASLAALGGVLLLRGAIRGRIAVRDPRGRP
Ga0207648_1053878143300026089Miscanthus RhizosphereLGSGLRVLLGVVGAVALGAGLVVAGIELRYAYLGSPLVPTLAASLVASLAALGGALLIRGALRGRIAVRSPRRGRRAADGR
Ga0207648_1088526113300026089Miscanthus RhizosphereMSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRV
Ga0207674_1014935643300026116Corn RhizosphereGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
Ga0207683_1075161923300026121Miscanthus RhizosphereVVERDLGFGLRVLLGVVGAAALGAGLVVAGIELRYAYLGSPRVPTLIASLVAGLAALGGALLIRGASRGRIAVRSPRRGRRQADGR
Ga0207698_1202798233300026142Corn RhizosphereVLLAIIGAAALGSGVVVAATQIRSGSLSSAPLRTSLVVLVAGLAAVGGGLLLRGAIRGRIPVRDPRGRR
Ga0207428_1054040913300027907Populus RhizosphereMSQRTANLGPGLRVLLGVIGVAALGSGVVVAATELSAASRGSPLLPTLLASVVAGVAVLGGVLLIRGAVLGRIAVRDPRGRR
Ga0209382_1002213473300027909Populus RhizosphereVLLGVIGVAALGSGVVVAATELSAASRGSPLLPTLLASVVAGVAVLGGVLLIRGAVLGRIAVRDPRGRR
Ga0209382_1134211513300027909Populus RhizosphereMPLRTANLGPGLRVLLGIIGTAALGSGAVVTATELRSAYLGSPLVPTLLASLVAAFAALGGGLILRGAIRGRIAVRDPRGRK
Ga0247828_1050532513300028587SoilASMSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
Ga0307408_10002940053300031548RhizosphereMPQHIANLGPGLRVLLGVIGTAALGSGAVVTATELRSAYLGSPLVPTLLASLVAGFAALGGGLILRGAIRGRIAVRDPRGRR
Ga0307468_10144933923300031740Hardwood Forest SoilMPLRTANLGPGLRVLLGIIGTAALGSGVVVTATELRSAYVGAPLVPTLLAALVAGLAALGGGLILRGAIRGRIAVRDPRGRT
Ga0307406_1011190733300031901RhizosphereMPQHIANLGPGLRVLLGVIGTAALGSGAVVTATELRSAYLGSPLVPTLLASLVAGFAALGGGLILRGAIRGQIAV
Ga0308175_10003079613300031938SoilMPLRTTNLGPVLRVLLGVIGTAALGSGVVVTATELRLAYLGSPLLPTLLAALVAGLAALGGGLVLRGAIQGRIAVRDPRGRT
Ga0308175_10032101523300031938SoilMNEERVLGIGLRVLLAVIGIAALGAGLVVAATELRSAHLGSPPLPTMLASVVALVAAFGGALLIRGALRGRIAVRPIRRDR
Ga0310884_1091294313300031944SoilLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
Ga0310903_1066615023300032000SoilALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
Ga0307471_10118121823300032180Hardwood Forest SoilSSTFESSIEMPLRTANLGPGLRVLLGIIGTAALGSGVVVTATELRSAYVGAPLVPTLLAALVAGLAALGGGLILRGAIRGRIAVRDPRGGT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.