Metagenome / Metatranscriptome Family F094204

Basic Information
Family ID	F094204
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	90 residues
Representative Sequence	MSYVWYESYKAVVLETDWTKMHDRIQSAECKIHDRQRELSEDHGGTPEERQAILNALNGMRSLRTEVADWQSRQAPQASEAKTTSVALSPGLSD
Number of Associated Samples	83
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.58 %
% of genes near scaffold ends (potentially truncated)	33.96 %
% of genes from short scaffolds (< 2000 bps)	70.75 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Most Common Taxonomy
Group	Bacteria (81.132 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil (23.585 % of family members)
Environment Ontology (ENVO)	Unclassified (23.585 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.321 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.64% β-sheet: 0.00% Coil/Unstructured: 48.36%
Feature Viewer

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Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00027	cNMP_binding	33.96
PF13545	HTH_Crp_2	13.21
PF00072	Response_reg	3.77
PF07730	HisKA_3	1.89
PF13450	NAD_binding_8	0.94
PF02239	Cytochrom_D1	0.94
PF00166	Cpn10	0.94
PF00271	Helicase_C	0.94
PF00682	HMGL-like	0.94
PF07992	Pyr_redox_2	0.94
PF13519	VWA_2	0.94
PF08238	Sel1	0.94
PF14332	DUF4388	0.94
PF05532	CsbD	0.94
PF08922	DUF1905	0.94
PF13620	CarboxypepD_reg	0.94
PF05569	Peptidase_M56	0.94
PF05170	AsmA	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	1.89
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.89
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.89
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	1.89
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG2982	Uncharacterized conserved protein AsmA involved in outer membrane biogenesis	Cell wall/membrane/envelope biogenesis [M]	0.94
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.94

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.13 %
Unclassified	root	N/A	18.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.13 %
Unclassified	root	N/A	18.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.13 %
Unclassified	root	N/A	18.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.87 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	17.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.87 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.66 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.77 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.66 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	3.77 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.83 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.77 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.83 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.77 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.94 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.77 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.94 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001131\|JGI12631J13338_1004234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2738	Open in IMG/M
3300004104\|Ga0058891_1505644	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300005336\|Ga0070680_100944001	Not Available	744	Open in IMG/M
3300005434\|Ga0070709_10433211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	987	Open in IMG/M
3300005435\|Ga0070714_100075600	All Organisms → cellular organisms → Bacteria	2922	Open in IMG/M
3300005435\|Ga0070714_100327202	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300005436\|Ga0070713_100689495	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300005454\|Ga0066687_10421346	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300005526\|Ga0073909_10329994	Not Available	701	Open in IMG/M
3300005529\|Ga0070741_10005807	All Organisms → cellular organisms → Bacteria	26982	Open in IMG/M
3300005533\|Ga0070734_10006828	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9403	Open in IMG/M
3300005533\|Ga0070734_10011521	All Organisms → cellular organisms → Bacteria → Acidobacteria	6435	Open in IMG/M
3300005533\|Ga0070734_10218103	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1098	Open in IMG/M
3300005534\|Ga0070735_10000681	All Organisms → cellular organisms → Bacteria	35304	Open in IMG/M
3300005534\|Ga0070735_10007648	All Organisms → cellular organisms → Bacteria → Acidobacteria	8591	Open in IMG/M
3300005534\|Ga0070735_10569699	Not Available	673	Open in IMG/M
3300005535\|Ga0070684_100973212	Not Available	796	Open in IMG/M
3300005537\|Ga0070730_10006112	All Organisms → cellular organisms → Bacteria	10319	Open in IMG/M
3300005538\|Ga0070731_10013213	All Organisms → cellular organisms → Bacteria	5969	Open in IMG/M
3300005541\|Ga0070733_10283676	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300005542\|Ga0070732_10043829	All Organisms → cellular organisms → Bacteria	2574	Open in IMG/M
3300005542\|Ga0070732_10048668	All Organisms → cellular organisms → Bacteria	2446	Open in IMG/M
3300005542\|Ga0070732_10162515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1331	Open in IMG/M
3300005563\|Ga0068855_100155228	All Organisms → cellular organisms → Bacteria	2601	Open in IMG/M
3300005568\|Ga0066703_10124398	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300005575\|Ga0066702_10240788	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300005591\|Ga0070761_10425540	All Organisms → cellular organisms → Bacteria → Acidobacteria	812	Open in IMG/M
3300005610\|Ga0070763_10716839	Not Available	587	Open in IMG/M
3300006028\|Ga0070717_10180109	All Organisms → cellular organisms → Bacteria	1842	Open in IMG/M
3300006032\|Ga0066696_10764211	Not Available	618	Open in IMG/M
3300006175\|Ga0070712_100597697	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300006800\|Ga0066660_10879195	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300006954\|Ga0079219_10174651	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300007982\|Ga0102924_1262397	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300007982\|Ga0102924_1283568	Not Available	666	Open in IMG/M
3300010152\|Ga0126318_10711090	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300010396\|Ga0134126_10334846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1768	Open in IMG/M
3300011120\|Ga0150983_10564298	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300012501\|Ga0157351_1006978	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300012984\|Ga0164309_11600135	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300012987\|Ga0164307_11233762	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300013306\|Ga0163162_12013022	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300013307\|Ga0157372_11641993	Not Available	740	Open in IMG/M
3300015261\|Ga0182006_1279433	Not Available	547	Open in IMG/M
3300015265\|Ga0182005_1053614	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300015357\|Ga0134072_10365519	Not Available	558	Open in IMG/M
3300015374\|Ga0132255_104471029	Not Available	593	Open in IMG/M
3300017924\|Ga0187820_1040135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1241	Open in IMG/M
3300017927\|Ga0187824_10217744	Not Available	654	Open in IMG/M
3300017930\|Ga0187825_10041581	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300017936\|Ga0187821_10276699	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300017948\|Ga0187847_10371992	Not Available	784	Open in IMG/M
3300018034\|Ga0187863_10018930	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4234	Open in IMG/M
3300018037\|Ga0187883_10161360	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300018047\|Ga0187859_10648945	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300018468\|Ga0066662_10559173	All Organisms → cellular organisms → Bacteria → Acidobacteria	1059	Open in IMG/M
3300020579\|Ga0210407_10393184	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300020582\|Ga0210395_10048847	All Organisms → cellular organisms → Bacteria	3098	Open in IMG/M
3300021170\|Ga0210400_10013023	All Organisms → cellular organisms → Bacteria → Proteobacteria	6627	Open in IMG/M
3300021170\|Ga0210400_10073791	All Organisms → cellular organisms → Bacteria	2675	Open in IMG/M
3300021170\|Ga0210400_10576210	All Organisms → cellular organisms → Bacteria → Acidobacteria	928	Open in IMG/M
3300021181\|Ga0210388_10969934	All Organisms → cellular organisms → Bacteria → Acidobacteria	730	Open in IMG/M
3300021403\|Ga0210397_10119825	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300021404\|Ga0210389_10034447	All Organisms → cellular organisms → Bacteria	3891	Open in IMG/M
3300021404\|Ga0210389_10034588	All Organisms → cellular organisms → Bacteria → Acidobacteria	3882	Open in IMG/M
3300021406\|Ga0210386_11705229	Not Available	520	Open in IMG/M
3300021407\|Ga0210383_10072247	All Organisms → cellular organisms → Bacteria	2884	Open in IMG/M
3300021445\|Ga0182009_10009864	All Organisms → cellular organisms → Bacteria	3270	Open in IMG/M
3300021445\|Ga0182009_10011952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3047	Open in IMG/M
3300021445\|Ga0182009_10282155	Not Available	832	Open in IMG/M
3300021474\|Ga0210390_10427166	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300021474\|Ga0210390_10597503	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300022557\|Ga0212123_10393738	Not Available	931	Open in IMG/M
3300025612\|Ga0208691_1028621	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1294	Open in IMG/M
3300025915\|Ga0207693_10491227	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300025915\|Ga0207693_10953858	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300025928\|Ga0207700_10605775	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300025929\|Ga0207664_10535703	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300025929\|Ga0207664_10888832	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300025929\|Ga0207664_11850121	Not Available	526	Open in IMG/M
3300025949\|Ga0207667_10428876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1345	Open in IMG/M
3300026078\|Ga0207702_12010613	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300026527\|Ga0209059_1001321	All Organisms → cellular organisms → Bacteria	11259	Open in IMG/M
3300027692\|Ga0209530_1001347	All Organisms → cellular organisms → Bacteria	11431	Open in IMG/M
3300027787\|Ga0209074_10351504	Not Available	604	Open in IMG/M
3300027821\|Ga0209811_10406637	Not Available	528	Open in IMG/M
3300027826\|Ga0209060_10006985	All Organisms → cellular organisms → Bacteria → Acidobacteria	7529	Open in IMG/M
3300027826\|Ga0209060_10017765	All Organisms → cellular organisms → Bacteria	3813	Open in IMG/M
3300027826\|Ga0209060_10300010	Not Available	734	Open in IMG/M
3300027842\|Ga0209580_10166739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1087	Open in IMG/M
3300027842\|Ga0209580_10315138	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300027857\|Ga0209166_10000048	All Organisms → cellular organisms → Bacteria	162624	Open in IMG/M
3300027857\|Ga0209166_10034444	All Organisms → cellular organisms → Bacteria	3054	Open in IMG/M
3300027867\|Ga0209167_10207670	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300027879\|Ga0209169_10025063	All Organisms → cellular organisms → Bacteria	3191	Open in IMG/M
3300027986\|Ga0209168_10008645	All Organisms → cellular organisms → Bacteria	6230	Open in IMG/M
3300027986\|Ga0209168_10011540	All Organisms → cellular organisms → Bacteria → Acidobacteria	5258	Open in IMG/M
3300031090\|Ga0265760_10221857	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300031249\|Ga0265339_10054010	All Organisms → cellular organisms → Bacteria	2183	Open in IMG/M
3300031708\|Ga0310686_106388977	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300031708\|Ga0310686_110331158	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300031716\|Ga0310813_11446297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300031871\|Ga0316036_102822	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300031874\|Ga0316047_105724	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300031955\|Ga0316035_100710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1806	Open in IMG/M
3300032515\|Ga0348332_14251362	All Organisms → cellular organisms → Bacteria	1893	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.51%
Host-Associated	Host-Associated	8.49%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.25%
Aquatic	Environmental → Aquatic	12.26%
Plants	Host-Associated → Plants	8.49%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.30%
Freshwater	Environmental → Aquatic → Freshwater	9.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.77%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.83%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.49%
Loam	Environmental → Terrestrial → Soil → Loam	19.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.49%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.77%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.77%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.77%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	23.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.49%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	4.72%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.77%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.77%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.89%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.94%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.94%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001131	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015261	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG	Host-Associated	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031871	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031874	Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLE5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031955	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE1 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12631J13338_10042345	3300001131	Forest Soil	MTYVWYESYESVVLETDWTKMHERIQSAESKINDRKRVLSQDHGGTPEERQAIANALNSMCTLRTEVADWQSHQAQPV*
Ga0058891_15056442	3300004104	Forest Soil	QIPAFGGMTMTYTWYESYKAVVLETDWTKMPERIQSAECKINDRQRVLALDHGGTPQERQAVASALKAMCTVRTEVADWQSRQTPRASDAEQK*
Ga0070680_1009440012	3300005336	Corn Rhizosphere	MGYVWYDSYKAVIVETDWTKMQDRIQSAKSKINDRKRVLSEDHGGTPEETQAIANALNAMGTLRTEVADWQSRQVPRVTDEKTDEKTTSEIALGPELRD*
Ga0070709_104332112	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MNYVWYDSYKAVVLETDWTKMHDRIQSAECKIHDRQRELSEDHGGTPEERQAILNALNGMRSLRTEVADWQSRQAPQASEAKTTSVALSPGLSD*
Ga0070714_1000756003	3300005435	Agricultural Soil	MAASLLLPLYQTTISLDGVNMGYVWYDSYKAVIVETDWTKMQDRIQSAKSKINDRKRVLSEDHGGTPEERQAIANALNAMGTLRTEVADWQSRQVPRVTDEKTDEKTTSEIALGPELRD*
Ga0070714_1003272022	3300005435	Agricultural Soil	MNYVWYDSYKAVVLETDWTKMHDRIQSAECKIHDRQRELSEDHGGTPEERQAILNALSGMRTLRTEVADWQSRQAPQASQAKTTSVTLSPGLSD*
Ga0070713_1006894951	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSYVWYEAYKAVVLETDWTKMHDRIQSAECKIHDRQRVLSEDHGGTPQERQEIANALSSMRSLRTEVADWQSRQALPVIDANASSEIALSPEVRD*
Ga0066687_104213461	3300005454	Soil	MSYVWYESYKAVVLETDWTTMHDRIQSAECEMHDRQRELSADHGGTPEERQAIANALNGMRTLREELAYWQSRQAEPSDAKSTSEIALSPEVSD*
Ga0073909_103299941	3300005526	Surface Soil	MTYTWYESYKAVVLETDWAKMPERIQSAESKINDRQLVLSLDHGGTPQERQAIANALKAMCTVRTEVA
Ga0070741_100058079	3300005529	Surface Soil	MSYVWYESYKAVALETDWAKMHDRIQSAECKIHDRQRELSEDHGGTPQERQAIANALNAMCTLRTEVADYQNREATARQIRGDPR*
Ga0070734_100068282	3300005533	Surface Soil	MSYVWFESYKAVVLETDWTRMHDRIQSAECKIHDRQRVLSEDYGGSAAGRQAIANGLNGIGILRTEVAEWQSRQAPRATQRWPL*
Ga0070734_100115213	3300005533	Surface Soil	MTYVWYESYKAVALETDWTKMHELIQSAESKINDRKRVLSLDHGGTPGERQAIANALNALNTLRTEVADWQSRQAAETERRSGDL*
Ga0070734_102181032	3300005533	Surface Soil	MTMTYVWYESYKAVALETDWTKMHDLIQSAESKISERKRVLSLDHGGTREERQAIANALNALGTLRTEVADWQSRQAP*
Ga0070735_100006814	3300005534	Surface Soil	MTYVWYESYRAVAVETDWAKMHQRIQSAESKINDRKRVLSLDHGGTPEERQAIANALNAMGTLRTEVDNWQSRQAAQAERRRGHL*
Ga0070735_100076486	3300005534	Surface Soil	MGYVWYESYRAVALETDWTKMHERIQSAERKIHDRQRVLSKDHVGRSQERQGITKALNAIRTLRTEVADWQGRQAPASE*
Ga0070735_105696991	3300005534	Surface Soil	MSYVWYESYKAVVLETDWTKMHDRIQLAECKIHDRQRELSEDHGGTKQERQAIANALNGMSTLRTEVADWQSRQSPQKSEVKTTSEIALSPELRD*
Ga0070684_1009732122	3300005535	Corn Rhizosphere	MNYVWYDSYKAVVLETDWTKMHDRIQSAECKIHDRQRELSEDHGGTPEERQAILNALSGMRTLRTEIADWQSRQAPQASEAKTTSVPLSPGLRD*
Ga0070730_1000611214	3300005537	Surface Soil	MIYLWYESYEAVVLETDWMKMHERIQSAESKINDRKRVLSQDHGGTPEERQAIANALNALGTLRTEVDDWHRWQAAESERCRNNL*
Ga0070731_100132131	3300005538	Surface Soil	LTYVWYESYESVVLETDWTKMHERIQSAESKINDRKRVLSQDHGGTPEERQAIANALNALGTLRTEVADWQSRQAPQAERRRDHF*
Ga0070733_102836761	3300005541	Surface Soil	MSYVWYESYKAVILETDWTKMYDRIQTAEREIHDRQRVLSEDHGGTPQERRAIANALNGVRTLRTEVADWQRRQAPAA*
Ga0070732_100438293	3300005542	Surface Soil	MSYVWYKSYKAVILETDWTKMHDRIQSAECKIHDRQRVLSEDHGGTPQERQAITKALNAMRTLRTEVADWQSRQAPQASDAKTTSEIRVHPELRD*
Ga0070732_100486684	3300005542	Surface Soil	MSYVWYESYKAVVLETDWTKMHDRIQSAECKIQDRQRELSQDHGGTPQERQAIAKALDGMRTLRTEIADWQSRQTPQKSEAKTTSEIAHSPELRD*
Ga0070732_101625152	3300005542	Surface Soil	MSYVWYESYKAVALETDWTKMYDRIQSAECKIHDRQRQLSQDHGGTLQERQAIANALNAMCALRTEVAHWHSRQSPQLGDAKATSEIALGPELGD*
Ga0068855_1001552283	3300005563	Corn Rhizosphere	MNYVWYDSYKAVVLETDWTTMHDRLQSAECKIHERQRVLSEDHGGTPQERQAIANALDGMRTLRTEVADWQRRQAPQGSEAKTTSEIAPQS*
Ga0066703_101243982	3300005568	Soil	MSYVWYESYKAVVLETDWTTMHDRIQSAECEMHDRQRELSADHGGTPEERQAIRQALEAMRTLQTEIADWQGRQAPASDAKSTSEIALSPELSD*
Ga0066702_102407882	3300005575	Soil	MSYVWYESYKAVVPETDWTTMHDRIQSAECEMHDRQRELSADHGGTPEERQAIANALNGMRTLREELAYWQSRQAEPSDAKSTSEIALSPELSD*
Ga0070761_104255403	3300005591	Soil	MTMTYVWYESYESVVLETDWTKMHERIQSAESKINDRKRVLSQDHGGTPEERQAIANALNSMCTLRTEVADWQSRQAQPA*
Ga0070763_107168391	3300005610	Soil	MSYVWYEYYEAVVLETDWTKMHERIQSAECKIHDRQRVLSEDHGGTPQERQAIANALNGMRTLQAEVADWQSRQALRASETSAKASIPEQGMRPNAI*
Ga0070717_101801092	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTYVWYGSYEAVILETDWTKMQDRIQSAESKINDRKRVLSEGHGGTPEERHAIANALNAMGTLRTEVADWQSRQAPQATDEKTTSEIALGAELRD*
Ga0066696_107642111	3300006032	Soil	MSYVWYESYKAVVPETDWTTMHDRIQSAECEMHDRQRELSADHGGTPEERQAIANALNGMRTLREELAYWQSRQAEPSDAKSTSEIALS
Ga0070712_1005976971	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	DSYKAVVLETDWTTMHDRLQSAECKIHERQRVLSEDHGGTPQERQAIANALDGMRTLRTEVADWQRRQAPQGSEAKTTSEIAPQS*
Ga0066660_108791952	3300006800	Soil	MSYVWYESYRAVVLETDWTKMHDRIQSAACEMHDRQRELSADHGGTPEERQAIRQALEAMRTLREELAYWQSRQAEPSDAKSTSEIALSPELSD*
Ga0079219_101746512	3300006954	Agricultural Soil	MNYVWYDSYKAVVLETDWTKMHDRIQSAECKIHDRQRELSEDHGGTPEERQAILNALSGMRTLRTEVADWQSRQAPRASQAKTTSVTLSPGLSD*
Ga0102924_12623972	3300007982	Iron-Sulfur Acid Spring	GLDGVIMSYVWYESYKAVVLETDWTKMHDRIQSAECKIHDRQRWLSEDHGGTPQERQAIANALNGIRTLRTEVADWQSRHARASEETSPPSPELGDSA*
Ga0102924_12835681	3300007982	Iron-Sulfur Acid Spring	MSYVWYESYKAVVLETDWTKMHDRIQSAESKINDRQRVLSADYGGTPQERQAIANALNGMRTLGTEVADWQSRQAARASEAEITSAIAPSPEAGDSA*
Ga0126318_107110902	3300010152	Soil	FSLDGGTMNYVWYDSYKAVVLETDWTKMHDRIQSAECKIHDRQRELSEDHGGTPEERQAILNALSGMRALRTEIADWKSRQAPQASEAKTTSVALSPGLSD*
Ga0134126_103348461	3300010396	Terrestrial Soil	TDWTKMHDRIQSAESKIHDRQRVLSEDHGGTPQERQAIANALSGMRTLRTEIADWQSRQAPQVIDANATSKIALSPEVRD*
Ga0150983_105642981	3300011120	Forest Soil	AVVLETDWTRMHDRIQSAECKIHGRQRVLSEDHGGTPQERQAIANALNGMRTLRTEVADWQSRQASQETDAKTTSEIALSPILRDSVRRD*
Ga0157351_10069781	3300012501	Unplanted Soil	MDGGTMSYVWYESYKAVVLETDWTKMHDRIQSAECKIHDRQRVLSEDHGGTLQERQAIANALNAMRALRTEVADWHSRQSPQLSDAKTAAEIALSPELRD*
Ga0164309_116001352	3300012984	Soil	YKAVVLETDWAKMPERIQSAESKINDRQLVLSLDHGGTPQERQAIANALDGMRTLRTEVADWQRRQARQGSEAKTTSEIAPQS*
Ga0164307_112337621	3300012987	Soil	MSYVWYDSYKAVVLETDWTKIHDRIQSAECKMQDRQRELSADHGGTPEERQAILNALKGMRTLRAEIADWQSRQAPASDPKSTSENALSPESSD*
Ga0163162_120130222	3300013306	Switchgrass Rhizosphere	LDGVIMNYVWYDSYKAVVLETDWTTMHDRLQSAECKIHERQRVLSEDHGGTPQERQAIANALDGMRTLRTEVADWQRRQAPQGSEAKTTSEIAPQS*
Ga0157372_116419932	3300013307	Corn Rhizosphere	MAASLLLPLYQTTISLDGVNMGYVWYDSYKAVIVETDWTKMQDRIQSAKSKINDRKRVLSEDHGGTPEETQAIANALNAMGTLRTEVADWQSRQAQQATDEKTTSEIVLGAELRD*
Ga0182006_12794332	3300015261	Rhizosphere	MAASLLLPFCSDNTFSLDGGTMNYVWYDSYKAVVLETDWTKMHDRIQSAECKIHDRQRGLSEDHGGTPEERQAILNALSGMRTLRTEVADWQSRQAPQASQAKTTSVALSPGLSD*
Ga0182005_10536142	3300015265	Rhizosphere	MTYVWFESYEAVALETDWLKMHERIQSAESKIEDRKRVLSQDHGGTPEERQAIANALNALGTLRTEVDDWQSRQAAEAVRCRDDH*
Ga0134072_103655192	3300015357	Grasslands Soil	MSYVWYESYKAVVLETDWTKMHDRIQSAACEMHDRQRELSADHGGTPEERQAIRQALEAIRTLQTEVADWQSRQAPASDAKSTSEIALSPELSD*
Ga0132255_1044710291	3300015374	Arabidopsis Rhizosphere	MTLTYVWYESYESVVLETDWTKMQERIQWAESKINARKRLLSKDHGGTPEERQAIANALNALGTLRTEVADW
Ga0187820_10401352	3300017924	Freshwater Sediment	MTYVWYESYEVVVLETDWMKMHERIQSAESKINDRKRALSQDHGGTPEEKQAIANALSALGTLRTEVADWQSRQAPQAQGRTDHL
Ga0187824_102177441	3300017927	Freshwater Sediment	MTYVWYESYEVVVLETDWMKMHERIQSAESKINDRKRALSQDHGGTPEEKQAIANALSALGTLRTEVADWQSRQAPQAVAT
Ga0187825_100415812	3300017930	Freshwater Sediment	MTYVWYESYEAVALETDWMKMHERIQLAESKINDRKRVLSQDHGGAWEERQAIANALNALGTLQTEVDDWQIRQSAEAERCKR
Ga0187821_102766992	3300017936	Freshwater Sediment	MTYVWYESYEVVVLETDWMKMHERIQSAESKINDRKRVLSLDHGGTPDERQAIANALNALSTLRTEVADWQSRQAPQAVAT
Ga0187847_103719921	3300017948	Peatland	MSYVWYESYKAVVLETDWTKMYDRIQSAECKIRDRQRELSEDHGGTKQERQAIANALNGMRTLRTEVADWQSRQSPQKSEVKTTSEIALSPELPD
Ga0187863_100189301	3300018034	Peatland	MSYVWYEYYEAVVLETDWTKMHERIQSAECKIHDRQRVLSEDHGGTPQERQAIANALNGMRTLQAEVADWQSRQAPRASDAKITPADPPIPEQGMRPNAI
Ga0187883_101613602	3300018037	Peatland	MSYVWYESYKAVVLETDWTKIHDRIQSAERKIRDRQRELSEDHGGTKQERQAIANALNGMRTLRTEVADWQSRQSPQKSEVKTTSEIALSPELRD
Ga0187859_106489452	3300018047	Peatland	MGASLLVPFCSVKTILSLDGGTMSYVWYESYKAVVLETDWTKMYDRIQSAECKIRDRQRELSEDHGGTKQERQAIAKALNGMRTLRTEVADWQSRQSPQKSEVKTTSEIALSPELPD
Ga0066662_105591733	3300018468	Grasslands Soil	MSYVWYESYKAVVLETDWTTMHDRIQSAECEMHDRQRELSADHGGTPEERQAIANALNGMRTLREELAYWQSRQAEPS
Ga0210407_103931841	3300020579	Soil	MTYTWYESYKAVVLETDWTKMPERIQSAESKINDRQRVLALDHGGTPQERQAVASALKAMCTVRTEVADWQSRQTPRASDAEQK
Ga0210395_100488475	3300020582	Soil	MSYVWYESYRAVVLETDWTRMHDRIQSAECKIHGRQRVLSEDHGGTPQERQAIANALNGMRTLRTEVADWQSRQASQETDAKTTSEIALSPILRDSVRRD
Ga0210400_100130232	3300021170	Soil	MTYTWYESYKAVVVETDWTKMPERIQSAESKINDRQRVLSEDHGGTPHERQAIANALEAMCTVRTEVADWQSRQTPRASDAEQK
Ga0210400_100737911	3300021170	Soil	MSYVWYESYRAVVLETDWTRMHDRIQSAECKIHGRQRVLSEDHGGTPQERQAIANALNGMRTLRTEVADWQSRQA
Ga0210400_105762102	3300021170	Soil	MTMTYVWYESYKAVVLETDWTKMHERIHSAESKIYDRQRVLSEDHGGTSQEMQAIANALNAMRTLRKEVVDWQSRQTPRASDAGMTSAHGPEHDNAP
Ga0210388_109699341	3300021181	Soil	MTMTYVWYESYKAVVLETDWTKMHERIHSAESKIYDRQRVLSEDHGGTSQEMQAIANALNAMRTLRKEVVDWQSRQTP
Ga0210397_101198253	3300021403	Soil	MTYTWYESYKAVVLETDWTKMPERIQSAESKINDRQRVLSEDHGGTPHERQAIANALEAMCTVRTEVADWQSRQTPRASDAEQK
Ga0210389_100344475	3300021404	Soil	MTYVWYESYKAVVLETDWTKMHERIHSAESKIYDRQRVLSEDHGGTSQEMQAIANALNAMRTLRKEVVDWQSRQTPRASDAGMTSAHGPEHDNAP
Ga0210389_100345881	3300021404	Soil	VWYEYYEAVVLETDWTKMHERIQSAECKIHDRQRVLSEDHGGTPQERQAIANALNGMRTLQAEVADWQSRQALRASETSAKASIPEQGMRPNAI
Ga0210386_117052291	3300021406	Soil	MTYVWYESYKAVVLETDWTKMHERIHSAESKIYDRQRVLSEDHGGTSQEMQAIANALNAMRTLRKEVVDWQSRQTPRASDAG
Ga0210383_100722472	3300021407	Soil	MTYVWYESYKAVVLETDWTKMHERIHWAESKIYDRQRVLSEDHGGTPQERQAIANALNAMRTLRTEVADWQSRQTPRASDAEMTSAIVPSPEPRSAA
Ga0182009_100098646	3300021445	Soil	MTYVWFESYEAVALETDWLKMHERIQSAESKIEDRKRVLSQDHGGTPEERQAIANALNALGTLRTEVDDWQSRQAAEAVRCRDDH
Ga0182009_100119522	3300021445	Soil	MGYVWYDCYRAAIVETDWTEMQDRIESAESKINDRKRVLSEDHGGTPEERQAIANALNAMGTLRTEVADWQSRQAPQATEEKTTSEVAILTVQ
Ga0182009_102821551	3300021445	Soil	MNYVWYDSYKAVVLETDWTKMHDRIQSAECKIHDRQRGLSEDHGGTPEERQAILNALSGMRTLRTEVADWQSRQAPQASQAKTTSVALSPGLSD
Ga0210390_104271661	3300021474	Soil	MSYVWYESYKAVVLETDWTKMHDRIQSAECKIRDRRRELSEDHGGTKQERQAIANALNGMRTLRTEVADWQSRQSPQKSEVKTSSEIVLSPELRD
Ga0210390_105975032	3300021474	Soil	WYESYRAVVLETDWTRMHDRIQSAECKIHGRQRVLSEDHGGTPQERQAIANALNGMRTLRTEVADWQSRQASQETDAKTTSEIALSPILRDSVRRD
Ga0212123_103937382	3300022557	Iron-Sulfur Acid Spring	MSYVWYESYKAVVLETDWTKMHDRIQSAESKINDRQRVLSADYGGTPQERQAIANALNGMRTLGTEVADWQSRQAARASEAEITSAIAPSPEAGDSA
Ga0208691_10286212	3300025612	Peatland	MTMTYVWYESYESVVLETDWTKMHERIQSAESKINDRKRVLSQDHGGTPEERQAIANALNSMCTLRTEVADWQSRQAQPA
Ga0207693_104912271	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	WYDSYKAVVLETDWTTMHDRLQSAECKIHERQRVLSEDHGGTPQERQAIANALDGMRTLRTEVADWQRRQAPQGSEAKTTSEIAPQS
Ga0207693_109538582	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSYVWYESYKAVVLETDWTKMHDRIQSAECKIHDRQRELSEDHGGTPEERQAILNALNGMRSLRTEVADWQSRQAPQASEAKTTSVALSPGLSD
Ga0207700_106057752	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSYVWYEAYKAVVLETDWTKMHDRIQSAECKIHDRQRVLSEDHGGTPQERQEIANALSSMRSLRTEVADWQSRQALPVIDANASSEIALSPEVRD
Ga0207664_105357032	3300025929	Agricultural Soil	FTASVLSTIISLDGMTMTYVWYESYEAVVLETDWKKMQDRIQSAESKINNRKRVLSEDHGGTPEERQAIANALNAMGTLRTEVADWQSGQAPQATDEKTTSDIALGPELRD
Ga0207664_108888321	3300025929	Agricultural Soil	FSLDGGTMNYVWYDSYKAVVLETDWTKMHDRIQSAECKIHDRQRELSEDHGGTPEERQAILNALSGMRTLRTEVADWQSRQAPQASQAKTTSVTLSPGLSD
Ga0207664_118501212	3300025929	Agricultural Soil	LLPLYQTTISLDGVNMGYVWYDSYKAVIVETDWTKMQDRIQSAKSKINDRKRVLSEDHGGTPEETQAIANALNAMGTLRTEVADWQSRQVPRVTDEKTDEKTTSEIALGPELRD
Ga0207667_104288763	3300025949	Corn Rhizosphere	MNYVWYDSYKAVVLETDWTTMHDRLQSAECKIHERQRVLSEDHGGTPQERQAIANALDGMRTLRTEVADWQRRQAPQGSEAK
Ga0207702_120106131	3300026078	Corn Rhizosphere	TFSLDGGMMNYVWYDSYKAVVLETDWTKMHDRIQSAECKIHDRQRELSDDHGGTPEERQAILNALSGMRTLRTEIADWQSRQAPQASEAKTTSVPLSPGLRD
Ga0209059_10013216	3300026527	Soil	MSYVWYESYRAVVLETDWTKMHDRIQSAACEMHDRQRELSADHGGTPEERQAIRQALEAMRTLQTEIADWQGRQAPASDAKSTSEIALSPELSD
Ga0209530_100134711	3300027692	Forest Soil	MTYVWYESYESVVLETDWTKMHERIQSAESKINDRKRVLSQDHGGTPEERQAIANALNSMCTLRTEVADWQSHQAQPV
Ga0209074_103515042	3300027787	Agricultural Soil	MNYVWYDSYKAVVLETDWTKMHDRIQSAECKIHDRQRELSEDHGGTPEERQAILNTLNGMRSLRTEVADWQSRQAPQASEAKTTSVALSPGLSD
Ga0209811_104066371	3300027821	Surface Soil	MSYVWYESYKAVVLETDWTKMHDRIQSAECKIHDRQRVLSEDHGGTLQERQAIANALNAMRALRTEVADWHSRQSPQLSDAKTTSENRAQS
Ga0209060_1000698510	3300027826	Surface Soil	MTYVWYESYKAVALETDWTKMHELIQSAESKINDRKRVLSLDHGGTPGERQAIANALNALNTLRTEVADWQSRQAAETERRSGDL
Ga0209060_100177652	3300027826	Surface Soil	MSYVWFESYKAVVLETDWTRMHDRIQSAECKIHDRQRVLSEDYGGSAAGRQAIANGLNGIGILRTEVAEWQSRQAPRATQRWPL
Ga0209060_103000101	3300027826	Surface Soil	MTYVWYESYKAVALETDWTKMHDLIQSAESKISERKRVLSLDHGGTREERQAIANALNALGTLRTEVADWQSRQAP
Ga0209580_101667392	3300027842	Surface Soil	MSYVWYKSYKAVILETDWTKMHDRIQSAECKIHDRQRVLSEDHGGTPQERQAITKALNAMRTLRTEVADWQSRQAPQASDAKTTSEIRVHPELRD
Ga0209580_103151382	3300027842	Surface Soil	LMTYVWYESYKAVALETDWTRMQERIQSAESKISDRKRVLSLDRGGTPEERQAIANALNAMGTLRTEVANWQSRQAAQTERDRGHL
Ga0209166_100000489	3300027857	Surface Soil	MIYLWYESYEAVVLETDWMKMHERIQSAESKINDRKRVLSQDHGGTPEERQAIANALNALGTLRTEVDDWHRWQAAESERCRNNL
Ga0209166_100344441	3300027857	Surface Soil	MSYVWYESYKAVVLETDWTKMHDRIQSAECKIRDRQRELSEDHGGTKQERQAIAKALDGMRTLLTEVADWQSRQS
Ga0209167_102076701	3300027867	Surface Soil	MSYVWYESYKAVILETDWTKMYDRIQTAEREIHDRQRVLSEDHGGTPQERRAIANALNGVRTLRTEVADWQRRQAPAA
Ga0209169_100250633	3300027879	Soil	MSYVWYEYYEAVVLETDWTKMHERIQSAECKIHDRQRVLSEDHGGTPQERQAIANALNGMRTLQAEVADWQSRQAPRASDAKITPADPHIPEQGMRPNAI
Ga0209168_100086459	3300027986	Surface Soil	MGYVWYESYRAVALETDWTKMHERIQSAERKIHDRQRVLSKDHVGRSQERQGITKALNAIRTLRTEVADWQGRQAPASE
Ga0209168_100115404	3300027986	Surface Soil	MTYVWYESYRAVAVETDWAKMHQRIQSAESKINDRKRVLSLDHGGTPEERQAIANALNAMGTLRTEVDNWQSRQAAQAERRRGHL
Ga0265760_102218572	3300031090	Soil	VLETDWTKMHERIHWAESKIYDRQRVLSEDHGGTPQERQAIANALNAMRTLRTEVADWQSRQTPRASDAEMTSAIVPSPEPRSAA
Ga0265339_100540101	3300031249	Rhizosphere	MTMTYVWYESYEFVVLETDWMKMHERIQSAEAKINDRKRVLSQDHGGTPEERQAIANATNSMCTLRTEV
Ga0310686_1063889772	3300031708	Soil	MTYVWYESYESVVLETDWTKMHERIQSAESKINDRKRVLSQDHGGTPEERQAIANALNSMCTLRTEVADWQSRQAQPA
Ga0310686_1103311583	3300031708	Soil	DWMKMHDRIQSAECKIHDRQRVLSADHGGTTQERQAIANALNGMRTLRTEVADWQSRQAARPSEAEITSAIAPTPELGDSA
Ga0310813_114462971	3300031716	Soil	MGYVWYDCYRAAIVETDWTEMQDRIQSAESKINDRKRVLSEDHGGTPEERHAIGNALNAMGTLRTEVADWRRRQ
Ga0316036_1028222	3300031871	Soil	WYESYKAVVLETDWMKMHDRIQSAECKIHYRQRVLSADHGGTTQERQAIANALNGMRTLRTEVADWQSRQAARPSEAEITSAIAPTPELGDSA
Ga0316047_1057241	3300031874	Soil	LETDWMKMHDRIQSAECKIHYRQRVLSADHGGTTQERQAIANALNGMRTLRTEVADWQSRQAARPSEAEITSAIAPTPELGDSA
Ga0316035_1007103	3300031955	Soil	AVVLETDWMKMHDRIQSAECKIHYRQRVLSADHGGTTQERQAIANALNGMRTLRTEVADWQSRQAARPSEAEITSAIAPTPELGDSA
Ga0348332_142513623	3300032515	Plant Litter	DNNLSLDGVTMSYVWYESYKAVVLETDWMKMHDRIQSAECKIHDRQRVLSADHGGTPQERQAIANALNGMRTLRTEVADWQSRQAARASEAEITSAIAPSPELR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094204

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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