Metagenome / Metatranscriptome Family F094058

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094058
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	65 residues
Representative Sequence	MQILLNVIFYAFLAWLFYDATVVEHDPWFAFVVGFVIVVAIVCQLMPSLHASKVSPGEFPYDTIGD
Number of Associated Samples	73
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.79 %
% of genes near scaffold ends (potentially truncated)	24.53 %
% of genes from short scaffolds (< 2000 bps)	86.79 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland (16.038 % of family members)
Environment Ontology (ENVO)	Unclassified (42.453 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (25.472 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.52% β-sheet: 0.00% Coil/Unstructured: 48.48%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF01925	TauE	28.30
PF01326	PPDK_N	4.72
PF09084	NMT1	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	28.30
COG0574	Phosphoenolpyruvate synthase/pyruvate phosphate dikinase	Carbohydrate transport and metabolism [G]	4.72
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.94
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	48.11 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	41.51 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	41.51 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	33.02 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	5.66 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	33.02 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	5.66 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	33.02 %
Syntrophobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter	5.66 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	33.02 %
Syntrophobacter fumaroxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	5.66 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000786\|WSSedA2C2DRAFT_1023712	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300002961\|JGI11641J44799_10019970	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	2004	Open in IMG/M
3300002961\|JGI11641J44799_10026527	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	1716	Open in IMG/M
3300002961\|JGI11641J44799_10102099	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300002961\|JGI11641J44799_10111748	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300002961\|JGI11641J44799_10170386	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300003432\|JGI20214J51088_10090539	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	2151	Open in IMG/M
3300003432\|JGI20214J51088_10103767	All Organisms → cellular organisms → Bacteria	2003	Open in IMG/M
3300003432\|JGI20214J51088_10162515	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	1577	Open in IMG/M
3300003432\|JGI20214J51088_10222894	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	1321	Open in IMG/M
3300003432\|JGI20214J51088_10359360	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300003432\|JGI20214J51088_10483741	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300003541\|JGI20214J51650_11054628	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	567	Open in IMG/M
3300004048\|Ga0055494_10052777	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	787	Open in IMG/M
3300004048\|Ga0055494_10101740	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300004049\|Ga0055493_10033715	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	902	Open in IMG/M
3300004062\|Ga0055500_10096425	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300004778\|Ga0062383_10422384	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300005204\|Ga0068997_10174447	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	505	Open in IMG/M
3300005830\|Ga0074473_10278298	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3861	Open in IMG/M
3300005830\|Ga0074473_11202710	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300005831\|Ga0074471_10696850	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2646	Open in IMG/M
3300005833\|Ga0074472_10137931	All Organisms → cellular organisms → Bacteria	3183	Open in IMG/M
3300005833\|Ga0074472_10735792	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	2350	Open in IMG/M
3300005833\|Ga0074472_11200448	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300006224\|Ga0079037_100251945	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300006224\|Ga0079037_100510394	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300006224\|Ga0079037_100524184	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1141	Open in IMG/M
3300006224\|Ga0079037_102380944	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	528	Open in IMG/M
3300006930\|Ga0079303_10036822	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300006930\|Ga0079303_10058961	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300009039\|Ga0105152_10414221	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	568	Open in IMG/M
3300009091\|Ga0102851_10284705	All Organisms → cellular organisms → Bacteria → Proteobacteria	1606	Open in IMG/M
3300009091\|Ga0102851_10555630	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1191	Open in IMG/M
3300009091\|Ga0102851_10637774	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300009091\|Ga0102851_12378733	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	605	Open in IMG/M
3300009111\|Ga0115026_10337642	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1069	Open in IMG/M
3300009131\|Ga0115027_11529038	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	548	Open in IMG/M
3300009157\|Ga0105092_10821671	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300009167\|Ga0113563_10617767	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1203	Open in IMG/M
3300009168\|Ga0105104_10125730	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300009179\|Ga0115028_11087339	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300010308\|Ga0136652_1018830	All Organisms → cellular organisms → Bacteria → Proteobacteria	1594	Open in IMG/M
3300011340\|Ga0151652_10193390	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300011340\|Ga0151652_12178292	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	749	Open in IMG/M
3300014261\|Ga0075360_1095390	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	579	Open in IMG/M
3300014313\|Ga0075347_1005277	All Organisms → cellular organisms → Bacteria → Proteobacteria	2058	Open in IMG/M
3300014316\|Ga0075339_1258048	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300014321\|Ga0075353_1011967	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1449	Open in IMG/M
3300014321\|Ga0075353_1045590	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	896	Open in IMG/M
3300014324\|Ga0075352_1057776	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300014324\|Ga0075352_1070332	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	866	Open in IMG/M
3300014324\|Ga0075352_1100514	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	759	Open in IMG/M
3300017944\|Ga0187786_10240698	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	711	Open in IMG/M
3300018059\|Ga0184615_10074033	All Organisms → cellular organisms → Bacteria → Proteobacteria	1905	Open in IMG/M
3300021269\|Ga0210356_106090	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300021332\|Ga0210339_1481315	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300021859\|Ga0210334_10804772	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	618	Open in IMG/M
3300022385\|Ga0210376_1033328	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300022548\|Ga0212092_1188359	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300024056\|Ga0124853_1000202	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300024056\|Ga0124853_1145505	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300024056\|Ga0124853_1310995	All Organisms → cellular organisms → Bacteria → Proteobacteria	2191	Open in IMG/M
3300025956\|Ga0210104_1031043	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300025964\|Ga0210127_1007255	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1238	Open in IMG/M
3300025967\|Ga0210136_1065774	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	562	Open in IMG/M
3300026048\|Ga0208915_1024048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	562	Open in IMG/M
3300026344\|Ga0256800_1014424	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300026349\|Ga0256811_1008115	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300026350\|Ga0256823_1005982	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300026375\|Ga0256803_1002931	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1297	Open in IMG/M
3300026463\|Ga0256815_1009291	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300026463\|Ga0256815_1050354	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	535	Open in IMG/M
3300026476\|Ga0256808_1001606	All Organisms → cellular organisms → Bacteria → Proteobacteria	2060	Open in IMG/M
3300026477\|Ga0256807_1019004	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300026485\|Ga0256805_1011108	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	946	Open in IMG/M
3300026486\|Ga0256820_1068189	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	567	Open in IMG/M
3300027716\|Ga0209682_10186233	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	540	Open in IMG/M
3300027722\|Ga0209819_10334660	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300027743\|Ga0209593_10261116	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300027843\|Ga0209798_10338792	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300027877\|Ga0209293_10605607	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300027887\|Ga0208980_10105949	All Organisms → cellular organisms → Bacteria	1649	Open in IMG/M
3300027887\|Ga0208980_10170135	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1275	Open in IMG/M
3300027887\|Ga0208980_10205891	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300027887\|Ga0208980_10217243	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300027900\|Ga0209253_10033746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4284	Open in IMG/M
3300031772\|Ga0315288_10305163	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300031834\|Ga0315290_10548653	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300031834\|Ga0315290_11086912	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300031997\|Ga0315278_10073722	All Organisms → cellular organisms → Bacteria → Proteobacteria	3387	Open in IMG/M
3300032143\|Ga0315292_10107097	All Organisms → cellular organisms → Bacteria	2191	Open in IMG/M
3300032256\|Ga0315271_10190576	All Organisms → cellular organisms → Bacteria	1636	Open in IMG/M
3300033004\|Ga0335084_10023434	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	6291	Open in IMG/M
3300033408\|Ga0316605_11628914	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300033413\|Ga0316603_10753311	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	912	Open in IMG/M
3300033414\|Ga0316619_10206497	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300033414\|Ga0316619_10873769	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	774	Open in IMG/M
3300033416\|Ga0316622_100644581	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300033433\|Ga0326726_10934385	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	842	Open in IMG/M
3300033482\|Ga0316627_101265027	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300033487\|Ga0316630_10481841	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300033513\|Ga0316628_101737422	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	831	Open in IMG/M
3300033521\|Ga0316616_103547493	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300033557\|Ga0316617_100180493	All Organisms → cellular organisms → Bacteria	1649	Open in IMG/M
3300033557\|Ga0316617_100422170	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1184	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	75.47%
Terrestrial	Environmental → Terrestrial	24.53%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	40.57%
Marine	Environmental → Aquatic → Marine	26.42%
Soil	Environmental → Terrestrial → Soil	21.70%
Sediment	Environmental → Aquatic → Sediment	6.60%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.89%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.89%
Peat	Environmental → Terrestrial → Peat	0.94%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	25.47%
Wetlands	Environmental → Aquatic → Marine → Wetlands	22.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	21.70%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.55%
Lake	Environmental → Aquatic → Freshwater → Lake	6.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.60%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.77%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.89%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.89%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	21.70%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	16.04%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	14.15%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	11.32%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.55%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	6.60%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	6.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.60%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.77%
Microbial Mats	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Microbial Mats	1.89%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.89%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	16.04%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	11.32%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	11.32%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	9.43%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	9.43%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	6.60%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	5.66%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	5.66%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.77%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	3.77%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	3.77%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	2.83%
Wetland	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland	1.89%
Hot Spring Microbial Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Microbial Mats → Hot Spring Microbial Mat	1.89%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.89%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.94%
Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment	0.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.94%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000786	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A2 Cattail	Environmental	Open in IMG/M
3300002961	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300004048	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D2	Environmental	Open in IMG/M
3300004049	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D2	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005204	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2	Environmental	Open in IMG/M
3300005830	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBM	Environmental	Open in IMG/M
3300005831	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.43_YBM	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009039	Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cm	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300010308	Hot spring microbial mat communities from California, USA to study Microbial Dark Matter (Phase II) - Cone Pool mat layer E metaG	Environmental	Open in IMG/M
3300011340	Combined Assembly of Wetland Metatranscriptomes	Environmental	Open in IMG/M
3300014261	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleC_D1	Environmental	Open in IMG/M
3300014313	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D1	Environmental	Open in IMG/M
3300014316	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D1	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300021269	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.499 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021332	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.384 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021859	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.306 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022385	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S771 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022548	Cone Pool_combined assembly	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025956	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025964	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025967	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026048	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026344	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 C5	Environmental	Open in IMG/M
3300026349	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PU6	Environmental	Open in IMG/M
3300026350	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU6	Environmental	Open in IMG/M
3300026375	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 CS6	Environmental	Open in IMG/M
3300026463	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 CS6	Environmental	Open in IMG/M
3300026476	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PR6	Environmental	Open in IMG/M
3300026477	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PR5	Environmental	Open in IMG/M
3300026485	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 F6	Environmental	Open in IMG/M
3300026486	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PR6	Environmental	Open in IMG/M
3300027716	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
WSSedA2C2DRAFT_10237122	3300000786	Wetland	MQILLNVVFYAFLAFLFYDATMIEHDPWFAFVVGFVITVAIICQLMPSLHASKVSPGEFPYDTIGD*
JGI11641J44799_100199702	3300002961	Wetland	MQILLNVIFYAFLAWLFYDATVVEHDPWFAFVVGFVILVAVIVQLMPALHTSKVSPGEFPYDTIGD*
JGI11641J44799_100265272	3300002961	Wetland	MQILLNVVFYAFLAWLFYDATVVEHDPWFAFVIGFVIVVAIVVQLMPSLHTSKVSPGEFPYDTIGD*
JGI11641J44799_101020992	3300002961	Wetland	MQILLNVIFYAFLAFLMYDATLVEHDPWFAFVVGFVIVVAIVCQLTPSLHASKLTPGEFPYDTIGD*
JGI11641J44799_101117482	3300002961	Wetland	MQILLNVIFYAFLAFLMYDATLVEHDPWFAFVVGFVIVVAIVCQLTPSLHASKLTPGEFPXDTIGD*
JGI11641J44799_101703862	3300002961	Wetland	MQILLNVIFYAFLAFLMYDATVVEHDPWFAFVVGFVIVVAIICQLMPSLHASKVSPGEFPYDTIGD*
JGI20214J51088_100905393	3300003432	Wetland	MQILLNVVFYAFLAWLFYDATVVEHDPWFAFVVGFVILVAIIVQLMPGLHASKVSPGEFPYDTIGD*
JGI20214J51088_101037673	3300003432	Wetland	MQILLNVIFYAFLAFLMYDATVVEHDPWFAFVVGXVIVVAIICQLMPSLHASKVSPGEFPYDTIGD*
JGI20214J51088_101625152	3300003432	Wetland	MQILLNVVFYAFLAWLFYDATVVEHDPWFAFVIGFVIVVAIVVQLMPSLHTDKVSPGEFPYDTIGD*
JGI20214J51088_102228942	3300003432	Wetland	MQILINVVFYAFLAWLFYDATVVEHDPWFAFVIGFVILVAGIVQFMPGLHASKVSPGEFPYDTIGD*
JGI20214J51088_103593602	3300003432	Wetland	MQILLNVVFYAFLAFLLYDATVIEHDPWFAFVIGFVIVVAIVCQLMPSLHASKVSPGEFPYDTIGD*
JGI20214J51088_104837412	3300003432	Wetland	MQILLNVVFXAFLAFLFYDATMIEHDPWFAFVVGFVITVAIICQLMPSLHASKVSPGEFPYDTIGD*
JGI20214J51650_110546282	3300003541	Wetland	MQILLNVIFYAFLAWLFFDATVVERDWWFAFVVGFVILIAIIVQLMPGLHASKVSPGEFPYDTIGD*
Ga0055494_100527772	3300004048	Natural And Restored Wetlands	MQILLNVIFYSFLAWLMYDATVVEHDPWFAFVVGFVIVVAIVCQLMPSLHASKVSPGEFPYDTIGD*
Ga0055494_101017402	3300004048	Natural And Restored Wetlands	MQILLNVIFYAFLAWLFYDATAVEHDPWFAFVVGFVIVVAIVCQLMPSLHASKVSPGEFPYDTIGD*
Ga0055493_100337151	3300004049	Natural And Restored Wetlands	IFYSFLAWLMYDATVVEHDPWFAFVVGFVIVVAIVCQLMPSLHASKVSPGEFPYDTIGD*
Ga0055500_100964252	3300004062	Natural And Restored Wetlands	MQILLNVIFYAFLAWLFYDATVVEHDPWFAFVVGFVIVVAIICQLTPSMHASKVSPGEFPYDTIGD*
Ga0062383_104223842	3300004778	Wetland Sediment	MQILLNIIFYSFLVWLMYDATIIEKDYWFAFVVGFVICVAVVCQLMPSLHASKVSPGEFPYDTIGD*
Ga0068997_101744472	3300005204	Natural And Restored Wetlands	ILLNVIFYAFLAWLFYDATMVEHDPWFAFVVGFVIVVAIICQLTPSMHASKVSPGEFPYDTIGD*
Ga0074473_102782983	3300005830	Sediment (Intertidal)	MQILLNVIFYAFLAWLFYDATVVEHDPWFAFVVGFVIVVAIICQLMPSLHASKVSPGEFPYDTIGD*
Ga0074473_112027103	3300005830	Sediment (Intertidal)	MQILLNVIFYSFLAWLMYDATVVEHDPWFAFVVGFVIVVAIVCQLMPSLHASKGSPGEVPYDTIGD*
Ga0074471_106968502	3300005831	Sediment (Intertidal)	MQILLNVVFYAFLAFLFYDATIIEHDPWFAFVVGFVIVVAIICQLMPSLHASKVSPGEFPYDTIGD*
Ga0074472_101379316	3300005833	Sediment (Intertidal)	MQILLNVIFYAFLAWLFYDATVVEHDPWFAFVVGFVIVVAIVCQLMPSLHASKVSPGEFPYDTIGD*
Ga0074472_107357923	3300005833	Sediment (Intertidal)	MQILLNVIFYAFLAWLFYDATVGEHDPWFAFVVGFVILIAIVVQLMPSLHTSKVSPGEFPYDTIGD*
Ga0074472_112004482	3300005833	Sediment (Intertidal)	MQILLNVIFYSFLAFLMYDATVIEHDPWFAFVVGFVISVAVVCQLMPSLHASKVSPGEFPYDTIGD*
Ga0079037_1002519452	3300006224	Freshwater Wetlands	MQILLNVIFYAFLAWLFYDATVIEHDPWFAFVVGFVIVVAIVCQLMPSLHASKVSPGEFPYDTIGD*
Ga0079037_1005103943	3300006224	Freshwater Wetlands	MQILLNVIFYAFLAWLFYDSTVVEHDPWFAFVVGFVIVVAIIVQLMPALHASKVSPGEFPYDTIGD*
Ga0079037_1005241843	3300006224	Freshwater Wetlands	MQIALNIIFYAFLAWLFYDATVVEHDPWFAFVVGFVILVAIVVQLMPGLHASKVSPGEFPYDTIGD*
Ga0079037_1023809442	3300006224	Freshwater Wetlands	MQILLNIIFYSFLFWLMYDATIIEKDYWFAFVVGFVISVAVVCQLMPSLHASKVSPGEFPYDTIGD*
Ga0079303_100368223	3300006930	Deep Subsurface	MQILLNVIFYAFLAWLMYDATVVEHDPWFAFVVGFVITVAVVCQLMPSLHASKVSPGEFPYDTIGD*
Ga0079303_100589612	3300006930	Deep Subsurface	MQILLNVIFYAFLAYLMYDATVVEHDPWFAFVVGFVIVVAIVCQLMPSLHASKVSPGEFPYDTIGD*
Ga0105152_104142212	3300009039	Lake Sediment	MKILLNVVFYAFLAFLMYDATVIEQDWWFAFVVGFVIVVAVVCQLMPSLHASKVSPGEFPYDTIGD*
Ga0102851_102847053	3300009091	Freshwater Wetlands	PMQILLNIIFYSFLVWLMYDATIIEKDYWFAFVVGFVISVAIVCQLMPSLHASKVSPGEFPYDTIGD*
Ga0102851_105556303	3300009091	Freshwater Wetlands	PMQILLNIIFYSFLVWLMYDATIIEKDYWFAFVVGFVISVAVVCQLMPSLHASKVSPGEFPYDTIGD*
Ga0102851_106377743	3300009091	Freshwater Wetlands	MQILLNVIFYAFLAWLMYDATVVEHDPWFAFVVGFVITVAIVCQLMPSLHASKVSPGEFPYDTIGD*
Ga0102851_123787332	3300009091	Freshwater Wetlands	MQILLNVIFYAFLAWLFYDATVIEHDPWFAFVVGFVIVVAIVCQLMPSLHASKLSPGEFPYDTIGD*
Ga0115026_103376422	3300009111	Wetland	MQILLNIIFYSFLVWLMYDATIIEKDYWFAFVVGFVISVAVVCQLMPSLHASKVSPGEFPYDTIGD*
Ga0115027_115290382	3300009131	Wetland	LAWLFYDATVVEHDPWFAFVVGFVILVAVIVQLMPALHTSKVSPGEFPYDTIGD*
Ga0105092_108216711	3300009157	Freshwater Sediment	MQILLNVIFYAFLAFLFYDATVIEHDPWFAFVVGFVILVAGIVQFMPGLHANKVSPGEFPYKTIGD*
Ga0113563_106177673	3300009167	Freshwater Wetlands	MQILLNIIFYSFLAFLMYDATIIEKDYWFAFVVGFVISVAIVCQLMPSLHASKVSPGEFPYDTIGD*
Ga0105104_101257302	3300009168	Freshwater Sediment	MQILLNVIFYAFLAWLFYDATVIEHDPWFAFVVGFVILVAGVVQFMPGLHANKVTPGEFPYTTIGD*
Ga0115028_110873391	3300009179	Wetland	MQILLNIIFYSFLFWLMYDATIIEKDYWFAFVVGFVICVAVVCQLMPSLHASKVSPGEFPYD
Ga0136652_10188303	3300010308	Hot Spring Microbial Mat	MGKLGQIIANLILYGFLVWLLYDALVVEHDPWFAFCVGFVIAVAILVQLMPGLHARALSPGRFPDAESHG*
Ga0151652_101933903	3300011340	Wetland	MQILLNVIFYAFLAWLFYDATMVEHDPWFAFVVGFVIVVAIICQLVPSLHASKVSPGEFPYDTIGD*
Ga0151652_121782922	3300011340	Wetland	MQILLNVIFYAFLAWLFYDATVVEHDWWFAFVVGFVILVAIVVQLMPSLHTDKVSPGEFPYDTIGD*
Ga0075360_10953901	3300014261	Natural And Restored Wetlands	MQILLNVVFYAFLFWLFYDSTVVEHDPWFAFVVGFVILVAGIVQFMPGLHANKVSPGEFPYDTIGD*
Ga0075347_10052773	3300014313	Natural And Restored Wetlands	AFLAFLFYDATIIEHDPWFAFVVGFVIVVAIICQLTPSLHASKVSPGEFPYDTIGD*
Ga0075339_12580481	3300014316	Natural And Restored Wetlands	MQILLNVVFYAFLAFLFYDATIIEHDPWFAFVVGFVIVVAIICQLMPSLHASKVSPGEFPYDTI
Ga0075353_10119673	3300014321	Natural And Restored Wetlands	MQILLNVIFYAFLAFLFYDATVVEHDPWFAFVVGFVIVVAIVCQLMPSMHANKVSPGEFPYDTIGD*
Ga0075353_10455902	3300014321	Natural And Restored Wetlands	MQILLNVIFYAFLVWLFYDSAIVEHDPWFAFVVGFVIVVAIIVQLMPALHASKVSPGEFPYDTIGD*
Ga0075352_10577763	3300014324	Natural And Restored Wetlands	MQILLNVIFYAFLAWLFYDATMVEHDPWFAFVVGFVIVVAIICQLTPSMHASKVSPGEFPYDTIGD*
Ga0075352_10703322	3300014324	Natural And Restored Wetlands	MQILLNVIFYAFLAWLFYDATMIEHDPWFAFVVGFVIVVAIIVQLMPALHASKVSPGEFPYDTIGD*
Ga0075352_11005143	3300014324	Natural And Restored Wetlands	MQLAINLIFYAFLAWLLYDGIFVEHDWWFVFVVGFVVLVAVIVQLMPGLHASKVSPGEFPYEV*
Ga0187786_102406981	3300017944	Tropical Peatland	MQLAINVIFYAFLAWLLYDGIFVEHDWWFVFVVGFVVLVAVIVQLMPGLHASKVSPGEFPYEV
Ga0184615_100740332	3300018059	Groundwater Sediment	MQILLNVIFYAFLAFLMYDATVIEHDPWFAFVVGFVIVVAIICQLMPSLHASKVSPGEFPYDTIGD
Ga0210356_1060901	3300021269	Estuarine	MQILLNVIFYAFLAWLFYDATVVEHDPWFAFVVGFVILVAIVVQLMPSLHTSKVSPGEFPYDT
Ga0210339_14813151	3300021332	Estuarine	MQILLNVIFYSFLAWLMYDATVVEHDPWFAFVVGFVIVVAIVCQLMPSLHASKVSPGEFP
Ga0210334_108047721	3300021859	Estuarine	QILLNVVFYAFLAFLFYDATIIEHDPWFAFVVGFVIVVAIICQLMPSLHASKVSPGEFPYDTIDD
Ga0210376_10333283	3300022385	Estuarine	MQILLNVVFYAFLAFLFYDATIIEHDPWFAFVVGFVIVVAIVCQLMPSLHASKVSPGEFPYETIGD
Ga0212092_11883593	3300022548	Hot Spring Microbial Mat	MGKLGQIIANLILYGFLVWLLYDALVVEHDPWFAFCVGFVIAVAILVQLMPGLHARALSPGRFPDAESHG
Ga0124853_10002023	3300024056	Freshwater Wetlands	MQILLNVIFYAFLAWLMYDATVVEHDPWFAFVVGFVITVAIVCQLMPSLHASKVS
Ga0124853_11455052	3300024056	Freshwater Wetlands	MQILLNVIFYAFLAWLMYDATVVEHDPWFAFVVGFVITVAIVCQLMPSLHASKVSPGEFPYDTIGD
Ga0124853_13109953	3300024056	Freshwater Wetlands	MQILLNVIFYAFLAWLFYDATVIEHDPWFAFVVGFVIVVAIVCQLMPSLHASKVSPGEFPYDTIGD
Ga0210104_10310432	3300025956	Natural And Restored Wetlands	MQILLNVIFYAFLAWLFYDATAVEHDPWFAFVVGFVIVVAIVCQLMPSLHASKVSPGEFPYDTIGD
Ga0210127_10072551	3300025964	Natural And Restored Wetlands	ILAWLMYDATVVEHDPWFAFVVGFVIVVAIVCQLMPSLHASKVSPGEFPYDTIGD
Ga0210136_10657742	3300025967	Natural And Restored Wetlands	MQILLNVIFYAFLAFLMYDATVVEHDPWFAFVVGFVIVVAIICQLMPSLHASKVSPGEFPYDTIGD
Ga0208915_10240482	3300026048	Natural And Restored Wetlands	MQILLNVIFYAFLAFLMYDATVVEHDPWFAFVVGFVIVVAIVCQLMPSMHANKVSPGEFPYDTIGD
Ga0256800_10144242	3300026344	Sediment	MQILLNIIFYAFLAWLFYDSTVVEHDPWFAFVVGFVIVVAIIVQLMPGLHASKVSPGEFPYDTIGD
Ga0256811_10081153	3300026349	Sediment	MQILLNVIFYAFLAWLFYDSTVVEHDWWFAFVVGFVILVAIIVQLMPNLHASKVSPGEFPYDTIGD
Ga0256823_10059821	3300026350	Sediment	MQILLNIIFYAFLAWLFYDSTVVEHDPWFAFVVGFVIVVAIIVQLMPGLHASK
Ga0256803_10029313	3300026375	Sediment	MQILLNVIFYSFLALLMYDATVVEHDPWFAFVVGFVIVVAIVCQLMPSLHASKVSPGEFPYDTIGD
Ga0256815_10092911	3300026463	Sediment	MQILLNIIFYAFLAWLFYDSTVVEHDPWFAFVVGFVIVVAIICQLMPSLHASKVSPGEFPYDTIG
Ga0256815_10503542	3300026463	Sediment	MQILINVVFYAFLAWLMYDATVVEHDPWFAFVVGFVIVVAIVCQLMPSLHASKVSPGEFPYETIGD
Ga0256808_10016063	3300026476	Sediment	MQILLNVIFYSFLAWLMYDATVVEHDPWFAFVVGFVIVVAIVCQLMPSLHASKVSPGEFPYETIGD
Ga0256807_10190042	3300026477	Sediment	MQILLNVIFYAFLAWLFYDATAVEHDPWFAFVVGFVIVVAIICQLMPSLHASKVSPGEFPYDTIGD
Ga0256805_10111082	3300026485	Sediment	MQILLNVIFYAFLAWLFYDATMVEHDPWFAFVVGFVIVVAIICQLMPSLHASKVSPGEFPYDTIGD
Ga0256820_10681892	3300026486	Sediment	FLAWLMYDATVVEHDPWFAFVVGFVIVVAIACQLTPSLHASHVSPGEFPYEHD
Ga0209682_101862332	3300027716	Wetland Sediment	MQILLNVIFYAFLAWLFYDATMVEHDPWFAFVVGFVILVAVIVQLMPALHTSKVSPGEFPYDTIGD
Ga0209819_103346603	3300027722	Freshwater Sediment	MQILLNVIFYAFLAFLFYDATVIEHDPWFAFVVGFVILVAGIVQFMPGLHANKVSPGEFPYKTIGD
Ga0209593_102611161	3300027743	Freshwater Sediment	MQILLNVIFYAFLAWLFYDATVIEHDPWFAFVVGFVILVAGVVQFMPGLHANKVTPGEFPYTTIG
Ga0209798_103387923	3300027843	Wetland Sediment	MQILLNIIFYSFLVWLMYDATIIEKDYWFAFVVGFVICVAVVCQLMPSLHASKVSPGEFPYDTIGD
Ga0209293_106056072	3300027877	Wetland	MQILLNVIFYAFLAWLFYDATVIEHDPWFAFVVGFVIVVAIVCQLMPSLHASKLSPGEFPYDTIGD
Ga0208980_101059492	3300027887	Wetland	MQILLNVVFYAFLAWLFYDATVVEHDPWFAFVIGFVIVVAIVVQLMPSLHTSKVSPGEFPYDTIGD
Ga0208980_101701352	3300027887	Wetland	MQILLNVIFYAFLAWLFYDATVVEHDPWFAFVVGFVILVAVIVQLMPALHTSKVSPGEFPYDTIGD
Ga0208980_102058912	3300027887	Wetland	MQILLNVIFYAFLAFLMYDATLVEHDPWFAFVVGFVIVVAIVCQLTPSLHASKLTPGEFPHDTIGD
Ga0208980_102172433	3300027887	Wetland	MQILLNVIFYAFLAWLFYDATMVEHDPWFAFVVGFVITVAIVCQLMPSLHASKVSPGEFPYDTIGD
Ga0209253_100337463	3300027900	Freshwater Lake Sediment	MQILLNVIFYAFLAWLMYDATVVEHDPWFAFVVGFVIVVAIVCQLMPSLHASKVSPGEFPYDTIGD
Ga0315288_103051632	3300031772	Sediment	MQILLNVIFYAFLAFLMYDATVIEQDWWFAFVVGFVIVVAVICQLMPSLHASKVSPGEFPYDTIGD
Ga0315290_105486533	3300031834	Sediment	MQILLNVIFYAFLAWLMYDATVIEQDWWFAFVVGFVIVVAIIVQLMPSLHASKVS
Ga0315290_110869123	3300031834	Sediment	MQILLNVVFYAFLAWLFYDATIVEHDPWFAFVVGFVIVVAIIVQLMPSLHTSKVSPGEFPYDTIGD
Ga0315278_100737223	3300031997	Sediment	MQILLNVIFYAFLAWLMYDATVVEQDWWFAFVVGFVIVVAIVVQLMPSLHASKVSPGEFPYDTIGD
Ga0315292_101070974	3300032143	Sediment	MQILLNVIFYAFLAWLMYDATVIEQDWWFAFVVGFVIVVAIVVQLMPSLHASKVSPGEFPYDTIGD
Ga0315271_101905763	3300032256	Sediment	MQILLNVVFYAFLAWLFYDATIVEHDPWFAFVVGFVIVVAIIVLLLPSLHTSKVSPGEFPYDTIGD
Ga0335084_100234343	3300033004	Soil	MQLAINLIFYAFLAWLLYDGIFVEHDWWFVFVVGFVVLVAIIVQLMPGLHASKVSPGEWPYET
Ga0316605_116289143	3300033408	Soil	MQILLNIIFYSFLVWLMYDATIIEKDYWFAFVVGFVISVAVVCQLMPSLHASKVS
Ga0316603_107533112	3300033413	Soil	MQILLNIIFYSFLAFLMYDATIIEKDYWFAFVVGFVISVAVVCQLMPSLHASKVSPGEFPYDTIGD
Ga0316619_102064972	3300033414	Soil	MQILLNIIFYSFLFWLMYDATIIEKDYWFAFVVGFVISVAVVCQLMPSLHASKVSPGEFPYDTIGD
Ga0316619_108737692	3300033414	Soil	MQILLNIIFYSFLAFLMYDATIIEKDYWFAFVVGFVISVAIVCQLMPSLHASKVSPGEFPYDTIGD
Ga0316622_1006445813	3300033416	Soil	MQILLNIIFYSFLVWLMYDATIIEKDYWFAFVVGFVISVAIVCQLMPSLHASKVSP
Ga0326726_109343852	3300033433	Peat Soil	MQILLNVVFYAFLAWLFYDATVVERDWWFAFVVGFVIVVAIIVQLMPALHASKVSPGEFPYDTIGD
Ga0316627_1012650273	3300033482	Soil	MQILLNVIFYAFLAWLMYDATVVEHDPWFAFVVGFVITVAIVCQLMPSLHASKVSPGEF
Ga0316630_104818413	3300033487	Soil	MQILLNIIFYSFLVWLMYDATIIEKDYWFAFVVGFVISVAVVCQLMPSLHASKVSPGEFPYDTIGD
Ga0316628_1017374221	3300033513	Soil	EPMQILLNIIFYSFLFWLMYDATIIEKDYWFAFVVGFVISVAIVCQLMPSLHASKVSPGEFPYDTIGD
Ga0316616_1035474933	3300033521	Soil	MQILLNVIFYAFLAWLFYDSTVVEHDPWFAFVVGFVIVVAIIVQLMPALHASKVSPGEFPYDTIGD
Ga0316617_1001804934	3300033557	Soil	MQILLNIIFYSFLVWLMYDATIIEKDYWFAFVVGFVISVAIVCQLMPSLHASKVSPGEFPYDTIGD
Ga0316617_1004221701	3300033557	Soil	FLAWLFYDATVIEHDPWFAFVVGFVIVVAIVCQLMPSLHASKVSPGEFPYDTIGD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094058

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences