Metagenome / Metatranscriptome Family F094026

Basic Information
Family ID	F094026
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	89 residues
Representative Sequence	PMSCAVQISTFDVDDIADARGVHRIATAEDIERVGTADQQPFDSYWVGFTNGAFVYTVDVHGPPGSVSEEQALDIASAYYDRLTGN
Number of Associated Samples	90
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.94 %
% of genes from short scaffolds (< 2000 bps)	0.94 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Most Common Taxonomy
Group	Unclassified (99.057 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (24.528 % of family members)
Environment Ontology (ENVO)	Unclassified (30.189 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.943 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.05% β-sheet: 28.07% Coil/Unstructured: 50.88%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
d.107.1.1: Mog1p/PsbP-like	d1jhsa_	1jhs	0.62
d.283.1.0: Putative modulator of DNA gyrase, PmbA/TldD	d5njcb_	5njc	0.62
d.107.1.1: Mog1p/PsbP-like	d1jhsa_	1jhs	0.62
d.283.1.0: Putative modulator of DNA gyrase, PmbA/TldD	d5njcb_	5njc	0.62
d.107.1.3: Mog1p/PsbP-like	d1tu1a1	1tu1	0.61
e.3.1.0: beta-lactamase/transpeptidase-like	d4ovda2	4ovd	0.61
d.107.1.3: Mog1p/PsbP-like	d1tu1a1	1tu1	0.61
e.3.1.0: beta-lactamase/transpeptidase-like	d4ovda2	4ovd	0.61
d.107.1.2: Mog1p/PsbP-like	d1v2ba_	1v2b	0.6
d.107.1.2: Mog1p/PsbP-like	d1v2ba_	1v2b	0.6

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00578	AhpC-TSA	2.83
PF01872	RibD_C	2.83
PF11303	DUF3105	2.83
PF14213	DUF4325	0.94
PF12681	Glyoxalase_2	0.94
PF13641	Glyco_tranf_2_3	0.94
PF01594	AI-2E_transport	0.94
PF07731	Cu-oxidase_2	0.94
PF00749	tRNA-synt_1c	0.94
PF04978	DUF664	0.94
PF00211	Guanylate_cyc	0.94
PF04655	APH_6_hur	0.94
PF07992	Pyr_redox_2	0.94
PF04542	Sigma70_r2	0.94
PF10944	DUF2630	0.94
PF02608	Bmp	0.94
PF00196	GerE	0.94
PF13458	Peripla_BP_6	0.94
PF13191	AAA_16	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	2.83
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	2.83
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.94
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.94
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.94
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.94
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.94
COG1744	Lipoprotein Med, regulator of KinD/Spo0A, PBP1-ABC superfamily, includes NupN	Signal transduction mechanisms [T]	0.94
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.94
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.94
COG3570	Streptomycin 6-kinase	Defense mechanisms [V]	0.94
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.94

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.06 %
All Organisms	root	All Organisms	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.06 %
cellular organisms	root	All Organisms → cellular organisms	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.06 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.06 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.06 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.06 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.06 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.06 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.94 %

Scaffold	Taxonomy	Length	IMG/M Link
3300011119\|Ga0105246_11169673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.81%
Host-Associated	Host-Associated	30.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.66%
Plants	Host-Associated → Plants	30.19%
Aquatic	Environmental → Aquatic	14.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.04%
Freshwater	Environmental → Aquatic → Freshwater	12.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.26%
Sediment	Environmental → Aquatic → Sediment	1.89%
Roots	Host-Associated → Plants → Roots	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.21%
Ice	Environmental → Aquatic → Freshwater → Ice	10.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.43%
Loam	Environmental → Terrestrial → Soil → Loam	5.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.89%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.94%
Lake	Environmental → Aquatic → Freshwater → Lake	0.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.94%
Sand	Environmental → Terrestrial → Soil → Sand	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.21%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	11.32%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	10.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.66%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	24.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	11.32%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	10.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.89%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.89%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.94%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.94%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012046	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ833 (21.06)	Environmental	Open in IMG/M
3300012091	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ483 (23.06)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012185	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ353 (21.06)	Environmental	Open in IMG/M
3300012186	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027443	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G05K4-12 (SPAdes)	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_01806790	2199352025	Soil	WLETDAMKPCPNSCATRVSSFGVDGIPDARGVHRIATAEDIEAAGTESEQPSDSYWVGFTVGSVVYVMELHGPPGGSVSEEQSQEIAGAYYDRLTGN
JGI10213J12805_118439881	3300000858	Soil	VQISDFDVDDIPDGRGVHRLSTAQLIKTSGTPDQHPFDSYWIGFTDGSIVYAVDLHGRPGSVSEEQAQEI
JGI10216J12902_1082916331	3300000956	Soil	ATSAVEWLATDVSKPCPGSCAVRHDTFDVDDLPDGRGVHSLATAEDIERVGTSDQQPFEAFWIGFSEGGMAYTVELFGRPGSVSEEQAQEIASAYYDRLTDD*
JGI10216J12902_1200378801	3300000956	Soil	ELASEDGATSALDWLETDVQKPCPGSCAVRHSTFDVDDLPGGRGVHSIATAEDIERVGTADQEPFESYWVGFTSGAIAYTVDLFGRPGSVSEEQALEIASAYHDRVTG*
Ga0062589_1021674311	3300004156	Soil	ARVSSFDVDGIPDARGVHRIATAEDIEAAGTADEDPSESYWVGFTAGSIVYTIDLHGTPGSVSEEQVQSIASAYHDRLTST*
Ga0063356_1005791061	3300004463	Arabidopsis Thaliana Rhizosphere	CPMSCAAKISSFDVDGIADARGVHRVATAEDIERIGTADQGPFDSYWIGFANDGIVYTVDLHGQPGTVSEEQAQQIARAYYARLAGS*
Ga0063356_1028819262	3300004463	Arabidopsis Thaliana Rhizosphere	ATVISTFDVDGIPDARGVHRIATAEDIEAAGTPAQVPSDSYWVGFTDGSTVYSVNLMGPPGSVSEEQALSIAGAYHDRLIAG*
Ga0070676_101735961	3300005328	Miscanthus Rhizosphere	GVHASATAEDIKRVGTSDQQPFESYWVGFTNGDIAYTVDLFGRPGSVSEEQALEIASAYHDRLTGG*
Ga0070682_1003924381	3300005337	Corn Rhizosphere	DDLPGGRGVHASATAEDIKRVGTSDQKPFESYWVGFTNGDIAYTFDLFGRPGSVSEEQALEIASAYHDRLTGG*
Ga0070703_100978063	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	HASATAEDIERVGTSDQRPFESYWVGFTNGDIAYTVDLFGRPGSVSEEQALEIASAYHDRLTGG*
Ga0070699_1005084462	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LDWLQADSKKPCPHSCATRVNSFAVDGIPDARGTHRIATAEDIEAAGNADEHPFESYWVGFTVGSIVYGIDLHGPPGSVSEEQVQKIVSAFYERLTGD*
Ga0070672_1004936711	3300005543	Miscanthus Rhizosphere	WLETDQKKACRMSCAVQRSEFDVSDIPQARGVHRSATAEDVERLGNEHEQPFDGYWIGFNVGPIVYTVNLQGPPGSVSEEQAVEIASAYHDRLTGS*
Ga0070693_1008575042	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	KPCPGSCAVRTSTFDVDDLPGGRGVHASATAEDIERVGTSDQRPFESYWVGFTNGDIAYTVDLFGRPGSVSEEQALEIASAYHDRLTGG*
Ga0070704_1018679301	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	AGNADEHPFESYWVGFTVGSIVYGIDLHGPPGSVSEEQVQKIVSAFYERLTGD*
Ga0070664_1011799672	3300005564	Corn Rhizosphere	VQRSSFDVADIPDARGVHRVATAEDIERVGTEDERPEDEYWIGFTIGPVVYTVALHGPPGSVSEDQAEDIASAYYERLTAD*
Ga0068856_1014994102	3300005614	Corn Rhizosphere	MKPCPNSCATRVSSFGVDGIPDARGVHRIATAEDIEAAGTESEQPSDSYWVGFTVGSVVYVMELHGPPGGSVSEEQSQEIASAYYDRLKGN*
Ga0068852_1010943032	3300005616	Corn Rhizosphere	DGATSALDWLETDLRKPCPGSCAVRTSTFDVDDLPGGRGVHASATAEDIERVGTSDQRPFESYWVGFTNGDIAYTVDLFGRPGSVSEEQALEIASAYHDRLTGG*
Ga0068859_1004126593	3300005617	Switchgrass Rhizosphere	IELESEDGATSALGWLETDAMKPCPNSCATRISSFGVDGIPDARGVHRIATAEDIEAAGTESEQPSDSYWVGFTVGSVVYVMELHGPPGGSVSEEQSQEIASAYYDRLKGN*
Ga0075432_100261301	3300006058	Populus Rhizosphere	ESQDGATSALDWLETDLRKPCPGSCAVRTSTFDVDDLPGGRGVHASATAEDIERVGTSDQRPFESYWVGFTNGDIAYTVDLFGRPGSVSEEQALEIASAYHDRLTGG*
Ga0097621_1008347231	3300006237	Miscanthus Rhizosphere	CAVRTSTFDVDDLPGGRGVHASATAEDIERVGTSDQRPFESYWVGFTNGDIAYTVDLFGRPGSVSEEQALEIASAYHDRLTGG*
Ga0074048_133890381	3300006581	Soil	RGVRRLTTAEDIERVGTEDQKPADSYWVGFTDGAVVYTVELFGPPGSVSEEQALEIANAYHDRLTG*
Ga0075420_1019280191	3300006853	Populus Rhizosphere	GRGVHASATAEDIERVGTSDQRPFESYWVGFTNGDIAYTVDLFGRPGSVSEEQAVEIASAYHDRLTGG*
Ga0068865_1006937121	3300006881	Miscanthus Rhizosphere	RTNTFAVDDLPGGRGVHASATAEDIERVGTSDQRPFESYWVGFTNGDIAYTVDLFGRPGSVSEEQALEIASAYHDRLTGG*
Ga0075419_106597832	3300006969	Populus Rhizosphere	MPGSCAVRTSTFDVDDLPGGRGVHASATAEDIERVGTSDQQPFESYWVGFTSGDIAYTVDLFGRPGSVSEEQALEIASAYHDRLTGG*
Ga0079218_138710461	3300007004	Agricultural Soil	RIATAEDIEAAGTEDQQPSDDYWVGFTVGPVVYTVALQGPPGSVSEEQAQQIVRVYYDRLTSN*
Ga0105245_103961853	3300009098	Miscanthus Rhizosphere	DSEDGATSALDWLETDQKKACRMSCAVQRSEFDVSDIPQARGVHRSATAEDVERLGNEHEQPFDGYWIGFNVGPIVYTVNLQGPPGSVSKEQAVEIASAYHDRLTGS*
Ga0105243_104626582	3300009148	Miscanthus Rhizosphere	EDIEEFGTTEQVPLDSYWVAFTDAGVVYIMELHGPPGSVSEKQALDIARAYHDRLTGT*
Ga0111538_102625282	3300009156	Populus Rhizosphere	RIATAEDIEAAGNENEVPSESYWVGFTVDSIVYTVDLHGQPGSVTEEQAQSIANAFYERLTG*
Ga0111538_108317611	3300009156	Populus Rhizosphere	RIATAEDIEAAGNENEVPSESYWVGFTVDSIVYTVDLHGQPGSVTEEQAQSIASAFYERLTG*
Ga0105242_126504701	3300009176	Miscanthus Rhizosphere	ETDQKKACRMSCAVQRSEFDVSDIPQARGVHRSATPDDVKRLGNEHEQPFDGYWIGFNVGPIVYTVNLQGPPGSVSEEQAQEIASAYYERVAGN*
Ga0105248_117580463	3300009177	Switchgrass Rhizosphere	IEAVGATEQRPLDSYWVGFTDGDVVYTVDLQGPPGSVSEKQAKEIANAYHQRLTGGG*
Ga0105248_125044422	3300009177	Switchgrass Rhizosphere	GATSALDWLETDQKKACRMSCAVQRSEFDVSDIPQARGVHRSATAEDVERLGNEHEQPFDGYWIGFNVGPIVYTVNLQGPPGSVSEEQAVEIASAYHDRLTGS*
Ga0105084_11046752	3300009811	Groundwater Sand	RIATAEDIEAAGTEAEDPSESYWVGFTDGSIVYTVDLHGTPGSVSEEQVQSIASAYHDRLTGS*
Ga0126312_104627561	3300010041	Serpentine Soil	SCAAQVSSFDVNDIPDARGVHRIATAEAIERLGTTDQHPFDSYWVGFTEGPSVYTVDLRGPPGSVSEEEAQKIARAYHDRLTGD*
Ga0126312_108056881	3300010041	Serpentine Soil	SFIELESEDGATSALDWLETDSQKPCPESCAAQVSSFDVNDIPDARGVHRIATAEAIERLGTGDQHPFDSYWVGFTEGPSVYTVDLQGPPGSVSEEEAQKIARAYHDRLTGD*
Ga0134125_104878583	3300010371	Terrestrial Soil	DLPGGRGVHASATAEDIERVGTSDQRPFESYWVGFTNGDIAYTVDLFGRPGSVSEEQALEIASAYHDRLTGG*
Ga0134127_131368012	3300010399	Terrestrial Soil	HRVATAEDIEAAGTGDEHPSESFWVGFTVGSIVYSIDVHGAPGSVSEEQAQKIASAYYDRLNGD*
Ga0105246_111696732	3300011119	Miscanthus Rhizosphere	TSALDWLEADKLKPCPRSCAVQRSSFDVADIPDARGVHRVATAEDIERVGTEDERPEDEYWIGFTIGPVVYTVALHGPPGSVSEDQAEDIASAYYERLTAD*
Ga0136623_102510082	3300012045	Polar Desert Sand	SRHIFSSVIQLQSEEGATSALDWLEADRKKPCPKTCAVQIGEFDVDDIPDARGVHPSASAEDIEAVGNDDERPFDAYWIGFTDGSSVYTVDLHGPPGSVSEEQALKIASAYYERIAVS*
Ga0136634_103251762	3300012046	Polar Desert Sand	DDIADARGVHRIATAEDIERVGTEDQQPFDSYLVGFTNGAFVYTVDLRGPPGSVSENQALDIASAYYDRLTAG*
Ga0136625_10070831	3300012091	Polar Desert Sand	MKPCPESCAVQIGEFDVDDIPDARGVHPSASAEDIEAVGNDDERPFDAYWIGFTDGSFVYTVDLNGPPGSVSEEQAEDIAGALYERIVDLSS*
Ga0136625_12640781	3300012091	Polar Desert Sand	MKPCPESCAVQIGEFDVDDIPDARGVHPSASAEDIEAVGNDDERPFDAYWIGFTDGSSVYTVDLHGPPGSVSEEQALKIASAYYERIAVS*
Ga0136632_103306801	3300012093	Polar Desert Sand	GFEAAIVDTRFFGETHSPSSPHTSSSVIQLQSEEGATSALDWLEADRKKPCPKTCAVQIGEFDVDDIPDARGVHPSASAEDIEAVGNDDERPFDAYWIGFTDGSSVYTVDLHGPPGSVSEEQALKIASAYYERIAVS*
Ga0136619_103884322	3300012185	Polar Desert Sand	EDGATSALDWLETDSKKPCPRSCAVKISTFEVDDVADARGVHRSATADDIERLGLEDDRPFDSYWVGFTNGAFVYTVDLHGPPGSVSEEQALDIASAYYNRLTGN*
Ga0136620_103454922	3300012186	Polar Desert Sand	VDGIPDARGVHPSASAEDIEAVGNDDERPFDAYWIGFTDGSSVYTVDLHGPPGSVSEEQALKIASAYYERIAVS*
Ga0136635_102018261	3300012530	Polar Desert Sand	MDAGFEAAIIDTRFFGDTHSPTSRHIFSSVIQLQSEEGATSALDWLEADIMKPCPESCAVQIGEFDVDDIPDARGVHPSASAEDIEAVGNDDERPFDAYWIGFTDGSSVYTVDLHGPPGSVSEEQAEDIAGALYERIVDLSS*
Ga0137373_102154382	3300012532	Vadose Zone Soil	MSCAVQISSFDVDDIADERGVHRTATAEDIARFGFKDQQPFDSYWVGFTNGAFVYTVELRGPPGSVSEEQAQKIASAYYDRLTGN*
Ga0136612_106928981	3300012680	Polar Desert Sand	ETHNPDAPHITSSVIQLQSEQGAKDALEWIVADDRKPCPKTCAVRISEFDVNGVPNAQGVHRSASAEDIEALGTEEDRPFDSYRIGFTVGSFVYTVDLHGPPGSVTEDQATDIAHALHGRVSELSS*
Ga0157375_104416653	3300013308	Miscanthus Rhizosphere	HVFSSFIELESEDGATSALGWLETDAMKPCPNSCATRVSSFGVDGIPDARGVHRIATAEDIEAAGTESEQPSDSYWVGFTVGSVVYVMELHGPPGGSVSEEQSQEIASAYYDRLKGN*
Ga0075309_11813602	3300014268	Natural And Restored Wetlands	ETDVMKPCPMSCAVDRSRFDVDGIADARGVHTSATAEDIERVGTEDQKPFDGYWIGFTNGAFVYTVDLFGPPGSVSEEQALDIVSAYYDRLTDS*
Ga0163163_108384762	3300014325	Switchgrass Rhizosphere	LDAADGAKRALDWIEADSRKPCPNSCATRTSSFDVDGIPDARGTHRLATAADIEAAGTENERPSDSYWVGFTDGSIVYSVELQGLPGAVSEEQAQRIARAYHDRLTGG*
Ga0157380_119020542	3300014326	Switchgrass Rhizosphere	VDDLPGGRGVHASATAEDIERVGTSDQRPFESYWVGFTNGDIAYTVDLFGRPGSVSEEQALEIASAYHDRLTGG*
Ga0173483_105269992	3300015077	Soil	MSCAVQRSTFDVDDIPGARGVHRSATADDIARVGTADERPFDSYWVGFTDSSFVYTVDLHGPPGSVTEEQAQTIANAYYERLKG
Ga0173478_102777652	3300015201	Soil	LDWLEADSMKPCPMSCAVQWSSFDVDDIPDGRGVHRLATAQMIKTAGTADEHPFDSYWVGFTEGSTVYSVDVHGPPGSVTEDQALKIASAYYERLAGM*
Ga0132258_110811674	3300015371	Arabidopsis Rhizosphere	VDGIPDARGVHRIATAEDIEEAGTESEQPSDSYWVGFTVGSVVYVMELHGPPGGSVSEEQSQEIASAYYDRLKGN*
Ga0132257_1025064112	3300015373	Arabidopsis Rhizosphere	HVFSSFIELESEDGATSALGWLETDAMKPCPNSCATRVSSFGVDGIPDARGVHRIATAEDIEEAGTESEQPSDSYWVGFTVGSVVYVMELHGPPGGSVSEEQSQEIASAYYDRLKGN*
Ga0132255_1025681632	3300015374	Arabidopsis Rhizosphere	LDWLETDQKKACRMSCAVQRSEFDVSDIPQARGVHRSATAEDVERLGNEHEQPFDGYWIGFNVGPIVYTVNLQGPPGSASEEQAVEIASAYHDRLTGS*
Ga0183260_109878381	3300017787	Polar Desert Sand	VIQLQSEEGATSALDWLEADSKKPCPETCAVQISEFDVDGIPDARGVHPSASAEDIEAVGNDDERPFDAYWIGFTDGSSVYTVDLHGPPGSVSEEQAEDIAGALYERIVDLSS
Ga0136617_107247671	3300017789	Polar Desert Sand	IQLQSEEGATSALDWLEADSKKPCPETCAVQISEFDVDGIPDARGVHPSASAEDIEAVGNDDERPFDAYWIGFTDGSSVYTVDLHGPPGSVSEEQAEDIAGALYERIVDLSS
Ga0163161_107321822	3300017792	Switchgrass Rhizosphere	CDVDDIPDARGVHRLATAQMIKTAGTADEHPFDSYWVGFTEGSSVYSVDVHGPPGSVTEQQALTIASAYYERLAGM
Ga0190266_108339961	3300017965	Soil	SSFIELDSEDGATSVLDWLEADSKKPCPMSCAVQISDFDVNDIPDARGVHRIATAEDIEKVGTEDQVPSDSYWVVFTDGALVYTVDLHGPPGSVSEEQALDIASAYYDRLAGN
Ga0184624_104030361	3300018073	Groundwater Sediment	ATAQAIEAAGTVDEHPFDSYWVGFTEGSTVYTVDVHGPPGSVSEEQALKIASAYYERLTG
Ga0190265_110995691	3300018422	Soil	QISTFDVDDIADARGLHRIATAEDIERVGTEDQQPFDSYWVGFTEGSLVYTVELRGPPGSVSEEQAQEIASAYFDRLTGS
Ga0190272_130563301	3300018429	Soil	IELDSGDGAATALDWLEADSMKPCPHSCAAVISSFDVDGIPDARGVHRVATAEDIEAAGTEAEDPSESYWVGFTEGSIVYTVDLHGIPGSVSEEQAQSIASAYHDRLTGG
Ga0190268_123590991	3300018466	Soil	ATSALDWLETDVRKPYPMSCAVQISDFDVSDIPNARGVRRLTTAEDIARVGTPHQRPLDSYWVGFVNGALAYTVDLRGPPGSVSEEQALEIATAYYARLTAG
Ga0190270_101268663	3300018469	Soil	FIELESEDGATSALDWLETDVKKPCPMSCAVDRSSFDVDDIADARGVHLIATAEDIERVGTQEQRPFESYWVGFTNGALVYTVDLFGRPGSVSEEQALEIASAYHDRLTGG
Ga0190270_103104833	3300018469	Soil	VDDLPDGRGVHSSATAEDIERVGNADQQPFEGYWVGFTNGGIAYTVDLFGRPGSVSEEQALEIASAYYDRLTGG
Ga0190270_118467982	3300018469	Soil	GIPDARGVHRIATAEDIEAAGTENEVPSDSYWVGFTVGSIIYSVDLHGPPGSVSEEQAQEIASAYYERLTGG
Ga0190270_133406581	3300018469	Soil	MKPCPLSCAVQISDFDVDDIPDGRGVHRLSTAQLIKTAGTANQVPSDSYWVGFTEGSIVYMVDVQGRPGSVSEEQAQKIASDYYERLTGI
Ga0190274_100522601	3300018476	Soil	LESEDGATSALDWLEADSRKPCPMSCAVQISDLDVPDIPNARGVRRLTTAEDIARVGTPDQRPLDSYWVGFVNGEFVYTVDLRGPPGSVSQEQALDIASAYYDRLTAG
Ga0190274_129322832	3300018476	Soil	ALDWLETDVQKPCPGSCAVRHSTFDVGDIPGGRGVRSIATAEDIERVGTSDQVPFESYWVGFTNGALAYTVELFGRPGSVSEEQAQEIASAYHDRLTEG
Ga0190271_108724583	3300018481	Soil	EISTFDVDDIPDARGVQRISTAEGIERVGNPDERPNEEYRIGFSNGAFVYAVTLFGPPGSVSEEQAQEIASAYYDRLTGS
Ga0190271_108790143	3300018481	Soil	MSCAAQISTFDVDDLPDARGVHRVATAEDIERVGTADEQPFESYWAGFTNGAFVYTVDLFGRPGSVSEEQALEIVSAYGDRLTGG
Ga0190271_111816882	3300018481	Soil	GSCAVRTSTFDVDDLPGGRGVHSSATAEDIERVGNPDQQPFEGYWVGFTNGGIAYTVDLFGRPGSVSEEQALEIANAYYDRLTAA
Ga0190271_137756062	3300018481	Soil	EDGATSALDWLESDIKKPCPMSCAVQRSEFDVDDIPDARGIHRSATAEDIERVGTADERPFDSYWVGFTDGAYVYTVDLHGPPGSVSEEEALEIVSAYYDRLLGNN
Ga0190273_117601531	3300018920	Soil	EADSMKPCPMSCAVQISDFDVDDIPDGRGVHRLSTAQLIKTSGTPDQHPFDSYWIGFTDGSIVYAVDLHGRPGSVSEEQAQEIAADYYDRLAGS
Ga0184646_10686851	3300019259	Groundwater Sediment	EEIEKVGAEDLVPFDSYWVGFTEGPFVYTLDLHGPPGSVSDEQAQEIASAYHDRLTGG
Ga0193696_11432171	3300020016	Soil	SALDWLETDTLKPCPMSCAVQRSQFDVDDIPGARGVHRSATAEDIARVGTGDEQPFDGYWVGFTDGSFVYTVELHGPPGSVTEEQALKIAQAHYERLKGN
Ga0193696_11682461	3300020016	Soil	PMSCAVQISTFDVDDIADARGVHRIATAEDIERVGTADQQPFDSYWVGFTNGAFVYTVDVHGPPGSVSEEQALDIASAYYDRLTGN
Ga0222622_104062193	3300022756	Groundwater Sediment	VQISDFDVDISDARGVHRIQTAEEIEKVGAEDLVPFDSYWVGFTEGPFVYTLDLHGPPGSVSDEQAQEIASAYHDRVTGD
Ga0207643_101422031	3300025908	Miscanthus Rhizosphere	SFGVDGIPDARGVHRIATAQDIEVAGTESEQPSDSYWVGFTVGSVVYVMELHGPPGGSVSEEQSQEIASAYYDRLKGN
Ga0207704_107515051	3300025938	Miscanthus Rhizosphere	TDQKKACRMSCAVQRSEFDVSDIPQARGVHRSATAEDVERLGNEHEQPFDGYWIGFNVGPIVYTVNLQGPPGSVSEEQAVEIASAYHDRLTGS
Ga0207711_119972282	3300025941	Switchgrass Rhizosphere	IATAEDIEAVGATEQRPLDSYWVGFTDGGIVYTVDLHGPPGSVSEKQAKEIANAYHQRLTGGG
Ga0207661_112369382	3300025944	Corn Rhizosphere	TFAVDDLPGGRGVHASATAEDIKRVGTSDQQPFESYWVGFTNGDIAYTVDLFGRPGSVSEEQALEIASAYHDRLTGG
Ga0207676_121849352	3300026095	Switchgrass Rhizosphere	DARGVHRLATAQMIKTAGTADEHPFDSYWVGFTEGSSVYSVDVHGPPGSVTEQQALTIASAYYERLAGM
Ga0207477_1030621	3300027443	Soil	TDAMKPCPNSCATRVSSFGVDGIPDARGVHRIATAQDIEVAGTESEQPSDSYWVGFTVGSVVYVMELHGPPGGSVSEEQSQEIASAYYDRLKGN
Ga0247818_113973502	3300028589	Soil	MSCAVQISEFDVDQIPGARGIHRSATAEDIERVGTADERPFDSYWVGFTDGSFVYTVDLHGPPGSVSEEEALEIANAYYERLASD
Ga0247822_111841931	3300028592	Soil	DWLETDSLKPCPMSCATQISEFDVDGIPDARGVHRIATAEDIEEFGTTEQVPLDSYWVAFTDAGVVYVMELHGPPGSVSEKQALDIARAYHDRLTGT
Ga0247820_103630431	3300028597	Soil	VRHSTFDVDDPPGARGVHSIATAEDIERLGTSDQMPFESYWVGFTNGDIAYTVDLFGRPGSVSEEQALEIASAYHDRLTGG
Ga0247820_112766532	3300028597	Soil	DAATGALDWLESDSRKPCPMSCAVQISTFDVDGIADARGVHRIATAEDIERVGTEEERPSDSYWVGFTNGAIVYTVDLFGPPGSVSEEQALDIASAYYDRLTDG
Ga0307307_101105982	3300028718	Soil	GVHRIATAEDIEAAGTESEDPSDSYWVGFAVGSIVYTVDLHGPPGSVSEEQAQKIVSAFYERLTSG
Ga0307301_102234353	3300028719	Soil	IPDARGVRRLTTAEEIEAAGTEEQIPSDQYLVGFTDGSFVYTVELMGPPGSVSEEQVQEIARAYYDRLTGD
Ga0307297_102768142	3300028754	Soil	WSKFDVDDIPDGRGVHRIATAQAIETAGTDNEIPFDSYWVGFIEGSTVYTVDVHGPPGSVSEEQALEIASAYYDRLTAM
Ga0247825_108014821	3300028812	Soil	DWLESDARKPCPMSCAVQISTFDVDDIADARGVHRIATAEDIERVGTENERPSDSYWVGFTDGAIVYTVDLFGPPGSVSEEQALDIARAYSDRLTDG
Ga0307302_101322393	3300028814	Soil	ATAEDIEAAGFEGERPSESYWVGFTVGSIVYTVDLSGPPGSVSEGQAQSVASAYHDRLAG
Ga0307286_103441751	3300028876	Soil	VFSSLIELDSEASAKGALDWLEADSMKPCPMSCAAQWSKFDVNSIPDARGVHRLATAQAIETAGTDNEIPFDSYWVGFTEGSTVYTVDVHGPPGSVSEEQALKIASAYYDRLSAM
Ga0307501_102389231	3300031152	Soil	KPCPMSCAVQRSQFDVDDIPGARGVHRSATADDIARVGTPDERPFDSYWVGFTDGSFVYTVELHGPPGSVTEEQVLKIAHAHYERLKGY
Ga0307498_100908591	3300031170	Soil	FYGETHTRSAPHLFNYVIQLQSEDGATSALDWLEADTMKPCPMDCAVQRSKFDVDDIPGARGVHRSATAEDIARVGTKDERPIDLYWVGFTDGPSVYSVTLQGQPGTVSEEQALKIASAYYERIAGN
Ga0310892_106142252	3300031858	Soil	TDLRKPCPGSCAVRTSTFDVDDLPGGRGVHASATAEDIERVGTSDQRPFESYWVGFTNGDIAYTVDLFGRPGSVSEEQALEIASAYHDRLTGG
Ga0310892_111893301	3300031858	Soil	GIPDARGVHRIATAEDIEEFGTTEQVPLDSYWVAFTDAGVVYVMELHGPPGSVSEKQALDIARAYHDRLTGT
Ga0310884_105372401	3300031944	Soil	IATAEDIEPAGTESEQPSDSYWVGFTVGSFVYVMELHGPPGGSVSEEQSQEIASPITTDSKGN
Ga0310902_104035852	3300032012	Soil	LKPCPMSCATQISEFDVDGIPDARGVHRIATAEDIEEFGTTEQVPLDSYWVAFTDAGVVYVMELHGPPGSVSEKQALDIARAYHDRLTGT
Ga0310906_109948162	3300032013	Soil	MKPCPNSCATRVSSFGVDGIPDARGVHRIATAEDIEPAGTESEQPSDSYWVGFTVGSFVYVMELHGPPGGSVSEEQSQEIASPITTDSKGN
Ga0334722_102308142	3300033233	Sediment	HTRTEPHVSSSVIRLQSEEGASSALDWLEADTMKPCPKSCAVQRSTFDVNDIPGARGIRRSANAADIERVRNKDERPFDGYWVGFTDGPFVYTVDLHGAPGSVFEEQALKIASAYYERLVGN
Ga0247829_111589251	3300033550	Soil	DAATGALDWLESDSRKPCPMSCAVQISTFDVDDIADARGVHRIATAEDIERVGTENERPSDSYWVGFTDGAIVYTVDLFGPPGSVSEEQALDIARAYSDRLTDG
Ga0247830_110906631	3300033551	Soil	GALDWLESDSRKPCPMSCAVQISTFDVDGIADARGVHRIATAEDIERVGTENERPSDSYWVGFTDGAIVYTVDLFGPPGSVSEEQALDIARAYSDRLTDG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094026

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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