Metagenome / Metatranscriptome Family F094019

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094019
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	67 residues
Representative Sequence	VPPFVGVAVNVTLVPEQIVLPGLAAMLTDGVNVVAPTLIVIPGDVAVVGLAQPSDEVITTVITSPLANALFE
Number of Associated Samples	66
Number of Associated Scaffolds	78

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	23.23 %
% of genes near scaffold ends (potentially truncated)	29.25 %
% of genes from short scaffolds (< 2000 bps)	93.40 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.755 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.472 % of family members)
Environment Ontology (ENVO)	Unclassified (37.736 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.340 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.00% β-sheet: 8.00% Coil/Unstructured: 89.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.16
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.16
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 78 Family Scaffolds
PF02368	Big_2	1.28
PF11617	Cu-binding_MopE	1.28

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.75 %
All Organisms	root	All Organisms	29.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.75 %
cellular organisms	root	All Organisms → cellular organisms	29.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.75 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.75 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	28.30 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.75 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	28.30 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.75 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	28.30 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.75 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	16.98 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	6.60 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.94 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.94 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.75 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	16.98 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	6.60 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.94 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.94 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.75 %
Cyclobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae	16.98 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	6.60 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.94 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	0.94 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.75 %
Algoriphagus	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus	16.98 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	6.60 %
unclassified Chitinophagaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae	0.94 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	0.94 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.75 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	6.60 %
Algoriphagus aquaeductus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus → Algoriphagus aquaeductus	3.77 %
Chitinophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	0.94 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	0.94 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_108833653	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	500	Open in IMG/M
3300005617\|Ga0068859_101364938	Not Available	781	Open in IMG/M
3300005617\|Ga0068859_101364938	Not Available	781	Open in IMG/M
3300005719\|Ga0068861_101633124	Not Available	636	Open in IMG/M
3300006032\|Ga0066696_10600740	Not Available	715	Open in IMG/M
3300006058\|Ga0075432_10539547	Not Available	525	Open in IMG/M
3300006237\|Ga0097621_101243854	Not Available	702	Open in IMG/M
3300006797\|Ga0066659_11425516	Not Available	579	Open in IMG/M
3300006800\|Ga0066660_11072466	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	641	Open in IMG/M
3300006844\|Ga0075428_102515023	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus → Algoriphagus aquaeductus	527	Open in IMG/M
3300006844\|Ga0075428_102515023	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus → Algoriphagus aquaeductus	527	Open in IMG/M
3300006853\|Ga0075420_101775521	Not Available	528	Open in IMG/M
3300006853\|Ga0075420_101775521	Not Available	528	Open in IMG/M
3300006894\|Ga0079215_10584442	Not Available	723	Open in IMG/M
3300006894\|Ga0079215_10584442	Not Available	723	Open in IMG/M
3300006918\|Ga0079216_11153732	Not Available	617	Open in IMG/M
3300006918\|Ga0079216_11153732	Not Available	617	Open in IMG/M
3300007004\|Ga0079218_11748245	Not Available	693	Open in IMG/M
3300007004\|Ga0079218_12120165	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus	649	Open in IMG/M
3300007004\|Ga0079218_13294435	Not Available	547	Open in IMG/M
3300007004\|Ga0079218_13294435	Not Available	547	Open in IMG/M
3300009094\|Ga0111539_11082544	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus	931	Open in IMG/M
3300009094\|Ga0111539_11978483	Not Available	676	Open in IMG/M
3300009094\|Ga0111539_11978483	Not Available	676	Open in IMG/M
3300009100\|Ga0075418_11914367	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus	645	Open in IMG/M
3300009100\|Ga0075418_12819871	Not Available	531	Open in IMG/M
3300009162\|Ga0075423_12016882	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus → Algoriphagus aquaeductus	625	Open in IMG/M
3300009537\|Ga0129283_10072887	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1384	Open in IMG/M
3300009553\|Ga0105249_13073071	Not Available	536	Open in IMG/M
3300012883\|Ga0157281_1026953	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	768	Open in IMG/M
3300012908\|Ga0157286_10429293	Not Available	520	Open in IMG/M
3300012908\|Ga0157286_10429293	Not Available	520	Open in IMG/M
3300012909\|Ga0157290_10212212	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus → Algoriphagus aquaeductus	665	Open in IMG/M
3300012912\|Ga0157306_10232603	Not Available	639	Open in IMG/M
3300012913\|Ga0157298_10209026	Not Available	632	Open in IMG/M
3300012913\|Ga0157298_10209026	Not Available	632	Open in IMG/M
3300012913\|Ga0157298_10424849	Not Available	513	Open in IMG/M
3300012914\|Ga0157297_10533458	Not Available	500	Open in IMG/M
3300013297\|Ga0157378_11191351	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	801	Open in IMG/M
3300013297\|Ga0157378_11191351	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	801	Open in IMG/M
3300015200\|Ga0173480_10635041	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	660	Open in IMG/M
3300015200\|Ga0173480_10955821	Not Available	561	Open in IMG/M
3300015200\|Ga0173480_11157045	Not Available	520	Open in IMG/M
3300015200\|Ga0173480_11157045	Not Available	520	Open in IMG/M
3300015201\|Ga0173478_10070323	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus	1208	Open in IMG/M
3300015201\|Ga0173478_10070323	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus	1208	Open in IMG/M
3300018083\|Ga0184628_10544475	Not Available	594	Open in IMG/M
3300018469\|Ga0190270_10981951	Not Available	869	Open in IMG/M
3300018469\|Ga0190270_11830664	Not Available	663	Open in IMG/M
3300018481\|Ga0190271_13448861	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus	530	Open in IMG/M
3300019361\|Ga0173482_10725280	Not Available	517	Open in IMG/M
3300019362\|Ga0173479_10279156	Not Available	750	Open in IMG/M
3300021339\|Ga0193706_1145538	Not Available	645	Open in IMG/M
3300021339\|Ga0193706_1145538	Not Available	645	Open in IMG/M
3300022737\|Ga0247747_1045711	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus	541	Open in IMG/M
3300022880\|Ga0247792_1079503	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	651	Open in IMG/M
3300022880\|Ga0247792_1109005	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus	574	Open in IMG/M
3300022880\|Ga0247792_1109005	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus	574	Open in IMG/M
3300022886\|Ga0247746_1103659	Not Available	697	Open in IMG/M
3300022899\|Ga0247795_1015281	Not Available	1227	Open in IMG/M
3300022899\|Ga0247795_1015281	Not Available	1227	Open in IMG/M
3300023057\|Ga0247797_1032799	Not Available	708	Open in IMG/M
3300023057\|Ga0247797_1032799	Not Available	708	Open in IMG/M
3300023062\|Ga0247791_1074850	Not Available	555	Open in IMG/M
3300023064\|Ga0247801_1034137	Not Available	736	Open in IMG/M
3300023067\|Ga0247743_1080767	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus	502	Open in IMG/M
3300025907\|Ga0207645_10934022	Not Available	589	Open in IMG/M
3300025907\|Ga0207645_10934022	Not Available	589	Open in IMG/M
3300025934\|Ga0207686_11277724	Not Available	602	Open in IMG/M
3300025981\|Ga0207640_11843939	Not Available	547	Open in IMG/M
3300025985\|Ga0210117_1052920	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	677	Open in IMG/M
3300026035\|Ga0207703_11770061	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	594	Open in IMG/M
3300026088\|Ga0207641_11539404	Not Available	667	Open in IMG/M
3300026088\|Ga0207641_11539404	Not Available	667	Open in IMG/M
3300026088\|Ga0207641_12391522	Not Available	527	Open in IMG/M
3300026116\|Ga0207674_12305515	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus	500	Open in IMG/M
3300026118\|Ga0207675_101832008	Not Available	626	Open in IMG/M
3300026550\|Ga0209474_10363320	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	796	Open in IMG/M
3300027691\|Ga0209485_1330353	Not Available	512	Open in IMG/M
3300027886\|Ga0209486_10288441	Not Available	962	Open in IMG/M
3300027886\|Ga0209486_10288441	Not Available	962	Open in IMG/M
3300027886\|Ga0209486_10288441	Not Available	962	Open in IMG/M
3300027992\|Ga0247750_1022083	Not Available	650	Open in IMG/M
3300028380\|Ga0268265_10791201	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus	924	Open in IMG/M
3300028380\|Ga0268265_10791201	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus	924	Open in IMG/M
3300028380\|Ga0268265_10791201	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus	924	Open in IMG/M
3300028380\|Ga0268265_11692042	Not Available	638	Open in IMG/M
3300028380\|Ga0268265_11692042	Not Available	638	Open in IMG/M
3300028381\|Ga0268264_10464112	Not Available	1229	Open in IMG/M
3300028381\|Ga0268264_10464112	Not Available	1229	Open in IMG/M
3300031093\|Ga0308197_10347232	Not Available	563	Open in IMG/M
3300031226\|Ga0307497_10540109	Not Available	581	Open in IMG/M
3300031226\|Ga0307497_10540109	Not Available	581	Open in IMG/M
3300031908\|Ga0310900_10621035	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	857	Open in IMG/M
3300031944\|Ga0310884_10707504	Not Available	610	Open in IMG/M
3300031944\|Ga0310884_10707504	Not Available	610	Open in IMG/M
3300032012\|Ga0310902_10637156	Not Available	712	Open in IMG/M
3300032012\|Ga0310902_10637156	Not Available	712	Open in IMG/M
3300032122\|Ga0310895_10673910	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	536	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.21%
Host-Associated	Host-Associated	36.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.43%
Plants	Host-Associated → Plants	36.79%
Aquatic	Environmental → Aquatic	3.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.98%
Freshwater	Environmental → Aquatic → Freshwater	0.94%
Marine	Environmental → Aquatic → Marine	0.94%
Sediment	Environmental → Aquatic → Sediment	0.94%
Unclassified	Environmental → Aquatic → Unclassified	0.94%
Roots	Host-Associated → Plants → Roots	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.49%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.89%
Lake	Environmental → Aquatic → Freshwater → Lake	0.94%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.94%
Loam	Environmental → Terrestrial → Soil → Loam	0.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.47%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	23.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.98%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.66%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.94%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	15.09%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	12.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	11.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.94%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.94%
Beach Aquifer Porewater	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009537	Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - D-2W	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300020009	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s1	Environmental	Open in IMG/M
3300021339	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1	Environmental	Open in IMG/M
3300022737	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S094-311B-5	Environmental	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental	Open in IMG/M
3300023062	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S081-202R-4	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300023067	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025985	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027992	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S125-311R-5	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1088336532	3300005332	Tropical Forest Soil	VKVTLVPEQIVLPGDAAILTDGTRFAFTVMVIALEVTGLGLAQLIDDVITQVITSPFTKEEF*
Ga0068859_1013649382	3300005617	Switchgrass Rhizosphere	VPPFVGVAVNETLVPAQIVLPGLAAMLTEGVTDPVTTIVIAFDIAVVGLAQASDEVITTVTTSPFTNPEL*
Ga0068859_1013649383	3300005617	Switchgrass Rhizosphere	VPPLVGVAVNVTFVPAQIVLLGLAAMLTDGVTDPVTIIVIAFDVAVVGLAQASDDVITTVITSPFTKPAFR*
Ga0068864_1025265621	3300005618	Switchgrass Rhizosphere	VPPLAGVAVKMTLVPEQIVLPGLAAMLTDGATAAVTVIVISLEEAVIGLAQVRDEVITQ
Ga0068861_1016331242	3300005719	Switchgrass Rhizosphere	LVGAAVNVTLVPEQIVLPGLALILTDGATDPVTIIVIPDDVAVVEFTQVSDDVITTVITSPFTKPLFE*
Ga0066696_106007403	3300006032	Soil	VPPLVGVAVKVTLVPVHIELPGAAAMLTDGATVPVTAMVIEFDVAVVGLAHAS
Ga0075432_105395472	3300006058	Populus Rhizosphere	VNVTLIPEQIVLPGLALMLTDGATDPVTIIMIPVDVAVAEVTQVREDVITTLTTSPFIKPLFE*
Ga0097621_1012438541	3300006237	Miscanthus Rhizosphere	VPPLVGEAVNTTFVPVQIVLSGLAAMLTDGVTVAVTVISIVFEVAVVGLAQASDEVITT
Ga0066659_114255163	3300006797	Soil	LVGVAVKVTLVPVHIALPGAAAMLTDGATVPVTAMVIEFDVAIDGLAHASDDVITTVTTS
Ga0066660_110724661	3300006800	Soil	VPPLVGIAVNVTLVPVHIVLPGAAAMLTDGATAPVTAMVIEFDVAVVGLEHASDDVITTATTSPLA
Ga0075428_1025150231	3300006844	Populus Rhizosphere	VPPLVGVAVNVTLVPVQIVLPGFAAILTDGVTVGFTVIVMALDVAAAGLAHANEDVIITVTTSPFTNEAF*
Ga0075428_1025150232	3300006844	Populus Rhizosphere	AAVNVTFVPVHIVFPGFALMLTDGATVDVTTIVIPDDVAVVGLAHASVDVITTVVTSPLTNEAF*
Ga0075420_1017755211	3300006853	Populus Rhizosphere	VNTTFVPVQIVLPGLAAMLTDGTTVAVTAIVIVLEVAVAGFAHASDEVITTLTWSPFTNVAFE*
Ga0075420_1017755212	3300006853	Populus Rhizosphere	VNTTFVPVQIVFPGLAAMLTDGATVAVTVIVIVLEVAVVGLAQANDEVITTLTWSPFTNAAFE*
Ga0079215_105844421	3300006894	Agricultural Soil	VGVAVNVTLVPAQIVLPGLATILTDGVTVDVTTIVIALDVAVEGLAHASDDVITTVTISPFTNPAF*
Ga0079215_105844422	3300006894	Agricultural Soil	VGVAVNVTLVPAQIVLPGLAAMLTNGVTVDVTTIVIAFDVAVVGFAQASDDVITTVTISPFTNPAF*
Ga0079216_111537321	3300006918	Agricultural Soil	VPPFVGIAVNMTLVPEQIVLPGLAAMLTDGVTADPTIIVIPVDVAVVGLAQASDEFIVTVITSPSANALFEYELLFVPTLFPFSFH*
Ga0079216_111537322	3300006918	Agricultural Soil	GIAVNMTLVPEQIVLPGLAAMLTDGVTVDPTVIVIPLEVTVAGLAQPSVEVITTVTTSPFINALFE*
Ga0079218_117482451	3300007004	Agricultural Soil	LVGVAVNVTLVPAQIVLPGLAAMLTDGVTVDVTTIVSALDVAVEGLAQASDDVITTVTISPLTNPAF*
Ga0079218_121201653	3300007004	Agricultural Soil	VPPFVGVAVKVTLLPEQIALPGLAVMLTDGVTVAPTIIVIPGDVAVVGLAQPNDDVITTVIISPLTNAAFE*
Ga0079218_132944351	3300007004	Agricultural Soil	VPPFVGDAVNVTFVPAQIVLPGLALTFTDGATVSVTVIVIPFDVAVVGLAHPSDDVITTVTTSPFTIVLFE*
Ga0079218_132944352	3300007004	Agricultural Soil	FVGVAVNVTLVPAQIVLPGLALILTAGTTVAPTVIVIAFDVALAGLAQPSEDVITTVTTSPFTNVLFE*
Ga0111539_110825442	3300009094	Populus Rhizosphere	VPPFVGVAVNVTLVPEQIVLPGLAAMLTDGVNVVAPTLIVIPGDVAVVGLAQPSDEVITTVITSPLANALFE*
Ga0111539_119784831	3300009094	Populus Rhizosphere	VPPFVGVAVNRTLVPEQIVLPGLAVTLTDGTIVDPTVIVIPVAVAVTGIAQVNDEVITTVTTSPLANALFECELLFVPTLLPFRFH*
Ga0111539_119784832	3300009094	Populus Rhizosphere	VNVTLVPEQIVLPGLAVMLTDGTAVDATVIVIGDDVAVVGLAHAIDEVITTVTISPLANALFE*
Ga0075418_112658981	3300009100	Populus Rhizosphere	LVGVAVNVTLVPAQIVPDGDAAIVTDGVIFAFTVIVIVLDVAVAGLAHGAFDVITQLTWSPF
Ga0075418_119143671	3300009100	Populus Rhizosphere	VPPLVGVAVNVTLVPEQIVFPGLAAILTDGVTVDVTIIVIPVDVAFAGEAQANDEVITTVTI
Ga0075418_128198712	3300009100	Populus Rhizosphere	VVLVPAQIVLPGFAAMLTDGVTADPTIIVIPAAVAVAGLAQANDEFITTVTISPFANALFE*
Ga0114129_112072032	3300009147	Populus Rhizosphere	VGVAVNVTDVPAQIVLPGAAAIVTDGVTLEETTIVIVLDVAVADVAQAAFDVITQLTWSPFTNVALV*
Ga0114129_112072033	3300009147	Populus Rhizosphere	LVGVAVNVTLVPAQIVPDGDAAIVTDGVTFAFTVIVVALDVTDAGLAHGAFDVITHVTTLPLAKAALV*
Ga0075423_120168823	3300009162	Populus Rhizosphere	VPPFVGVAVNTTFVPVQIVLPGLAAMLTDGTTVAVTVIVIVFEDAVAGLAQANDEVITTLTWSP
Ga0129283_100728874	3300009537	Beach Aquifer Porewater	VLPPFVGVAVKVTLFPAQMVFPGVAAIDTEGVTVPVTDMVIVLDIAVVGLTQFALEVNTTET*
Ga0105249_130730711	3300009553	Switchgrass Rhizosphere	VPPFVGVAVNVTLVPGHIVLPGLAAMFTDGATVDTTLVVIPVAVAVVGFAQLNEEVMTTVITSPFANALYE*
Ga0157281_10269532	3300012883	Soil	VKVTLVPAQIVLPGLAVTLTDGTIVDPTVIVIPVAVAVTGLAQVNDEVITTVTTSPLANALFE*
Ga0157286_104292931	3300012908	Soil	VPPLVGVAVNVTLVPEQIELPGLAAMLTDGDRVAPTIIVIPVDVAVVGLAQPSEEVITTVITSPLVNALFE*
Ga0157286_104292932	3300012908	Soil	VNVTLVPEQIVLPGLAAMLTDGVNVVDPTLIVIPGDVAVVGLAQPIEEVIT
Ga0157290_102122121	3300012909	Soil	VVPPFTGIAVNMTLVPGQIVVPGLAAMLTDGTNVDPTIIVIPVDVAVAGLTQASEEVITTVTTSPLANA
Ga0157306_102326032	3300012912	Soil	LVGFVENVTPVPAQIVLPGLAPILTDGTTDPVIIIVISFDVAVVGLAQARDDVITTVTISPFSHVAF*
Ga0157298_102090262	3300012913	Soil	VPPFVGVAVNKTLVTEQTELPGFAAMLTDGVPADPTLIVIPVDVAEVGLAQAIEEVITTVTTSPLANALFE*
Ga0157298_102090263	3300012913	Soil	VPPLVGVAVNVTLVPEQIELPGLAAMLTDGVRVAPTIIVIPVDVAVVGLAQPSEEVITTVITSPL
Ga0157298_104248492	3300012913	Soil	VNVTLVPEQIVLPGLAAMLTDGVNVVDPTLIVIPGDVAVVGLAQPIEEVITTVITSPLTKALFE*
Ga0157297_105334581	3300012914	Soil	VPPFVGVAVNKTLVPEQTELPGFAAMLTDGVPADPTLIVIPVDVAEVGLAQAIEEVITTVTTSPLANALFE*
Ga0157378_111913511	3300013297	Miscanthus Rhizosphere	VPPFVGVAVKVTFVPVQIVLPGDAAMLTDGITFAVTIIVIAFDVTGFGLAQVSDDVITQVTISPFDNDEF*
Ga0157378_111913512	3300013297	Miscanthus Rhizosphere	VPPFVGVAVKVTFVPAQIVLPGDAIILTDGVTNGFTTIVIELDVTGLGFAHVSDDVITQVTTSPFTNVEF*
Ga0173480_106350412	3300015200	Soil	VPPFVGIAVKVTLEPAQIGFPGLAATLTDGIIVDPTVIVIPVAVAVTGLAQVNDEVITTVTTSPLANPLFE*
Ga0173480_109558211	3300015200	Soil	VPPFVGVAVKVTLVPAQIALPELAPMLTDGTTVDPTVIIIPVEVAVVGLAQASDDVITTVTASPFASALFE*
Ga0173480_111570451	3300015200	Soil	LLFVPTLFPFSFHWYDGVPPFVGVAVKVTLVPEQIVLPGLELMLTDGTVVGATVIIIPADVAVVGLAQASDDVIITVITSPFANELFE*
Ga0173480_111570452	3300015200	Soil	TLVPVQIVLPGFALMLTDGTTVDPTIIVIPVDVVVVGLAHTSDEVIITVTTSPFANELFE
Ga0173478_100703233	3300015201	Soil	VNVTLVPEQIVLPGLAAMLTDGVNVVDPTLIVIPGDVAVVGLAQPIEEVITTVIASPLTKALFE*
Ga0173478_100703234	3300015201	Soil	VPPLVGVAVNVTLVPEQIELPGLAAMLTDGVRVAPTIIVIPVDVAVVGLAQPSEEVITTVITSPLVNALFE*
Ga0184628_105444752	3300018083	Groundwater Sediment	VPPFVGVAVNVTLVPVQIVIPGSALMITDGATVDETVIVIPFEVAVVGLAQASDDVITTVTTSPFANALFE
Ga0190270_109819512	3300018469	Soil	VPPFVGVAVKVTLVPAQIVFPGFAAILTDGATDPVIAIVIALDVAVVGLAQASDEVMTTVTTSPFAKALFE
Ga0190270_118306642	3300018469	Soil	VPPFVGVAVNVTFVPVQIVLPGFALMLTDGATVPVTTIAIKFDVAVVGLAQASDEVITTVTISPFINALFE
Ga0190271_134488612	3300018481	Soil	LVGVAVKFTLVPAQIDPSGFAAMLTDGATAAVTVIVIPVEVAVVGLAQARDDVITTVTTSPLANVLFEYVLLLVPTLLPFNFH
Ga0173482_107252801	3300019361	Soil	VPPFVGVAVNVTLVPAQIVLPGLATMLTDGTAVDATVIVIPVDVAVAGLAQASEEVNTTVTTVPFANALFE
Ga0173479_102791561	3300019362	Soil	VNTTFVPSQIVLPGLAAMLTDGTTVAVTAIIIVLEVAVAGFAHASDEVITTLTWSPFTSAAFE
Ga0193722_10949642	3300019877	Soil	VGVAVNVTLVPAQIVVADAEMLTDGATGEVTVIVMALEVAVEGLAQPDEEVMTTVTTLLLARLAF
Ga0193740_10642722	3300020009	Soil	VPPFNGCAVNITFVPAQMVLPVFTAILTVGATVEVTTMLMPVDVAVVGLAQARDDVITTVTTSPFSN
Ga0193706_11455381	3300021339	Soil	VEVKVTLLPAQIVLPGFAAMLTDGATVDVTTIVIELEVTGFGFVQLSDDVISTDTIFPFANELF
Ga0193706_11455382	3300021339	Soil	LVGVAVNVTLVPEQIVLPGFAAILTDGITVDVTVIVIEFDVTGFGLAQPMDEVISTVIIFPFVNELFW
Ga0247747_10457111	3300022737	Soil	VPAQIVLPGLAVTLTDGTIVDPTVIVIPVAVAVTGLAQVNDEVITTVTTSPLVNALFE
Ga0247792_10795032	3300022880	Soil	VPPFVGAAVNVTLVPEQIVLPGLAVILTDGTTVDTTSIVIPGDVAVVGLAQASDEVITTVIR
Ga0247792_11090051	3300022880	Soil	VPPFVGVAVNKTLVPEQMELPGFAAMLTDGVPADPTLIVIPVDVAEVGLAQAIEEVITTV
Ga0247792_11090052	3300022880	Soil	VVPPFTGIAVNVTLVPAQIVVPGLAAMLTDGTIVDPTIIVIPGDVAVAGLTQASEEVITTVTTSPLVNALFE
Ga0247746_11036593	3300022886	Soil	VPPLVGVAVNVTLVPVQIVLPGFALMLTDGTTVAETVIVMPVDVALVGLAQAREDVITTVTISPFANALRE
Ga0247795_10152811	3300022899	Soil	VPPLVGVAVNVTLVPEQIELPGLAAMLTDGDRVAPTIIVIPVDVAVVGLAQPSEEVITTVITSPLVNAL
Ga0247795_10152812	3300022899	Soil	VPPFVGVAVNKTLVPEQMELPGFAAMLTDGVPADPTLIVIPVDVAEVGLAQAIEEVITTVTTSPLANALFE
Ga0247797_10327992	3300023057	Soil	LLGVAVNVTLVPAQIVLPGLAPILTDGTTGPVTIIVISFDVAVVGLAQASDDVITTVTISPFCNVAF
Ga0247797_10327993	3300023057	Soil	LVGVAVNVTNVPVQMVLPGLAAMLTDGVTAAVTTIVISFDVAVVGLAQASDDVTTTVTISPFCSVAF
Ga0247791_10748502	3300023062	Soil	VPPFVGVAVNKTLVPEQTELPGFAAMLTDGVPADPTLIVIPVDVAEVGLAQAIEEVITTVTTSPLANALFE
Ga0247801_10341373	3300023064	Soil	VVPPFTGIAVNVTLVPAQIVVPGFAAMLTDGTIVDPTIIVIPGDVAVAGLTQASEEVITTVTTSP
Ga0247743_10807671	3300023067	Soil	GVPPFVGVAVNVTLVPEQIVLPGLAVMPTDGTTVDTISIVIPGDVAVVGLAQASDEVITTVIRLPFVSVLFE
Ga0207645_109340221	3300025907	Miscanthus Rhizosphere	VPPLVDVAVNVTFVPEQIVLPGFALMLTDGITDPVTIIVIALDVAVVGLAQASDDVITTVTTSPFTNPEF
Ga0207645_109340222	3300025907	Miscanthus Rhizosphere	VGVAVNETLVPAQIVLPGLAAMLTEGVTDPVTTIVIAFDIAVVGLAQASDEVITTVTTSPFTNPEL
Ga0207686_112777241	3300025934	Miscanthus Rhizosphere	VNATLVPVQIVLPGLAPILTDGVTVDVTNIVIPVDVAFAGEAQANDEVITTVTISPFAKELFE
Ga0207640_118439392	3300025981	Corn Rhizosphere	VNTTLVPVQIVLPGLAPILTDGVTVDVTIIVIPVDVAFAGEAQANDEVITTVTISPFAKELFE
Ga0210117_10529203	3300025985	Natural And Restored Wetlands	VAPPLVGIAVNVTLIPAQIVLPGPALMLTDGVTLPVTVIVIAFDVAVLTVTQLSEEVITQLTTSPFTNDEF
Ga0207703_117700611	3300026035	Switchgrass Rhizosphere	LVGAAVNVTLVPEHIVLPGLALMLTDGAIDPVITIVIPVDVAVVGFAQASDDVITTVITSPFTKALFE
Ga0207641_115394041	3300026088	Switchgrass Rhizosphere	VPPFVGVAVNKTLVPEQMELPRFAAMLTDGVPADPTLIVIPVDVAEVGLAQAIEEVITTVTTSPLANALFE
Ga0207641_115394042	3300026088	Switchgrass Rhizosphere	VVPPFTGIAVNVTLVPAQIVVPGFAAMLTDGTIVDPTIIVIPGDVAVAGLTQASEEVITTVTTSPLVNALFE
Ga0207641_123915221	3300026088	Switchgrass Rhizosphere	VNTTFVPVQLVLPGLAPILTDGVTVDVTIIVISVDVAFAGEAQAKDEVITTVTISPFAKELFE
Ga0207674_123055151	3300026116	Corn Rhizosphere	VPPFVCVAVNVTLAPAQIVLPGFAATLTDGVTVDPTIIVIRGDVAVIGLAHVALLVITTATESPLANVLFE
Ga0207675_1018320082	3300026118	Switchgrass Rhizosphere	LVGVVVNVTLVPEQMVLPGLALMLTDGATDPVMIIVIPADVAVVGFAQASDEVITTVITSPLTKALFEYVLLFVPTLFPFSFH
Ga0209474_103633203	3300026550	Soil	VPPLVGVAVNVTLVAMHIVLPGAAAMLTDGATVPVTAIVIEFDVAVIGLEHASDDVI
Ga0209485_13303532	3300027691	Agricultural Soil	MPPFVGVAVNVTLVPAQIVLPGLALMVTDGTTVGVTVIVIPFDAAVVGLAQPREDVITTVITSPFTNALFE
Ga0209486_102884411	3300027886	Agricultural Soil	VPPFVGVAVNVTFVPAQVVLPGLALILTPGTTVDPTVIVIAFDVALAGFAQPSDEVITTVTTSPFTNA
Ga0209486_102884412	3300027886	Agricultural Soil	MPPFVGVAVNVTFVPEQIVLPGLALILTAGTTVDPTVIVIAFDVALAGFAQPSDEVIMTVTTSPFTNALFE
Ga0209486_102884413	3300027886	Agricultural Soil	VPPFVGVAVNVTLVPVQIVLPGLALILTAGTTVDPTVIVIAFDVALAGFAQPSDEVIMTVTTSPFTNALFE
Ga0247750_10220833	3300027992	Soil	VPPFVGVAVNVTLVPVQIVLPGFALMLTDGTTVAETVIVMPVDVAIVGLAQARDDVITTVTTSPFANALFE
Ga0268265_107912012	3300028380	Switchgrass Rhizosphere	VPPFVGVAVNVTLVPEQIELPGFAAMLTDGVPADPTLSVIPVDVAEVGLAQAIEEVITTVTTSPLANALFE
Ga0268265_107912013	3300028380	Switchgrass Rhizosphere	VPPFVGVAVNVTLVPEQIVLPGLAAMLTDGVNVVDPTLIVIPGDVAVVGLAQPIEEVITTVITSPLTKALFE
Ga0268265_107912014	3300028380	Switchgrass Rhizosphere	DGVPPLVGVAVKMTLVPGQIVLPGLAVIVTDGVTVDPTLIVIPGEVAVGGLAQPSEEVIVTVTTSPFANALFE
Ga0268265_116920421	3300028380	Switchgrass Rhizosphere	AVNVTLVPVQIVLPGFALMVTDGTTVAETVIVMPVDVAIVGLAQARDDVITTVTTSPFANALFE
Ga0268265_116920422	3300028380	Switchgrass Rhizosphere	VPPLVGVAVNITLVPVQIVLPGFALMLTDGTTVAETVIVMPVDVAIAGLAQAREDVITTVTISPFANALLE
Ga0268264_104641121	3300028381	Switchgrass Rhizosphere	VPPFVGVAVNMTLVPEQIVLPGLALMFTDGVTDPVMIIVILFEVAVFGFAHPNDEVITTLTTSPFTNPAF
Ga0268264_104641122	3300028381	Switchgrass Rhizosphere	VNVTLVPEQIVLPGSAAILTDGVTVPATTIVILFEVAVAGFAQPSDDVITTLTTSPFTSPAF
Ga0308197_103472321	3300031093	Soil	LVGVAVKVTLVPVHIVLPGAAAILTDGATVPVTTMVIAFELAVVGFAQASDDVITTVTTSPLTSVEL
Ga0307497_105401091	3300031226	Soil	VPPLVGVAVNVTLVPAQIVLPGLATILTDGVTDPVTIIVIAFDVAVVGLAQASDEVITTVTTSPFNKPAF
Ga0307497_105401092	3300031226	Soil	VPPFDGDAVNVTNVPAQIVLPGLATILTDGVTDPVTIIVIAFDVAVVGLAQASDEVITTVTTSPFNKPAF
Ga0310900_106210351	3300031908	Soil	VPPFVAVAVNMTLVPEQMELPGLAAMLTDGAPADPTLIVMAVDVAEVGLAQAIEEVITTV
Ga0310884_107075041	3300031944	Soil	LVGVAVKVTLVPAQIVLPGFAAMLTEGATAPVITIVIELDVAVVGLAQASDEVITTVITSPFAKALFE
Ga0310884_107075042	3300031944	Soil	LVGVAVKVTLVPAQIVLPGLAAMLTEGATAPVITIVIAFDVAVVGLAQASDDVITTVITSPFAKAL
Ga0310902_106371561	3300032012	Soil	TTFVPVQITLPGLAAMLTDGATVAVTNIVIVFEVAVAGLAQASDEVITTLTWSPFTNAAF
Ga0310902_106371563	3300032012	Soil	VPPFVGVAVNTTFVPVQIVLPGLAAMLTDGTTVAVTVIVIVFDVAVAGLAQASDEVITALTWSPFTN
Ga0310895_106739101	3300032122	Soil	VPPFVGVAVNVTLVPAQIVLPGFAAMLTDGTTEPVIAIVIPFEVAVVGLAQANEDVIT
Ga0315287_128211011	3300032397	Sediment	VPPPLVGVAVKVTLVPAQIAPAGLAAMLTDGATAAVTDIAISLEVAVAGLAQASDDVITQVILSPFTKAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094019

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences