Basic Information | |
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Family ID | F093905 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 106 |
Average Sequence Length | 56 residues |
Representative Sequence | MKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK |
Number of Associated Samples | 90 |
Number of Associated Scaffolds | 106 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 46.23 % |
% of genes from short scaffolds (< 2000 bps) | 88.68 % |
Associated GOLD sequencing projects | 77 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (81.132 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (25.472 % of family members) |
Environment Ontology (ENVO) | Unclassified (86.792 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (90.566 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 67.92% β-sheet: 0.00% Coil/Unstructured: 32.08% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Marine Seawater Marine Marine Seawater Aqueous Seawater Marine Surface Water Sea-Ice Brine Marine Seawater Marine Estuarine Water Pelagic Marine Seawater Pelagic Marine Freshwater And Marine Marine Seawater Pond Water Water Saline Water And Sediment |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSum2011_101153324 | 3300000115 | Marine | MKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIVLEANNLMPKELLTNKIK* |
DelMOSpr2010_101095482 | 3300000116 | Marine | MKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDXALEANNLMPKELLTNKIK* |
DelMOSpr2010_101995081 | 3300000116 | Marine | KHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNRIK* |
DelMOSpr2010_102673481 | 3300000116 | Marine | VKLKTMKHIPKKEFNRFYTIMKNNPGNSVIENHVLYQKELALEANNLMPKELLTNKIK* |
DelMOWin2010_100405905 | 3300000117 | Marine | MKHISKKEFNDFYTIMKNNSDKSVLEVYNLYKSLRANNLMPKELISNKIK* |
DelMOWin2010_101393862 | 3300000117 | Marine | MKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK* |
SI47jul10_120mDRAFT_100829310 | 3300000212 | Marine | MKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLIPKELITNKIK* |
LPfeb09P261000mDRAFT_10151155 | 3300000250 | Marine | INDNINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK* |
BpDRAFT_103381204 | 3300000930 | Freshwater And Marine | MKHIPKKEFNRFYTIMKNNPGNTVLENHELYKKELALEANNLMPKELITNKIK* |
JGI20151J14362_100382192 | 3300001346 | Pelagic Marine | MKHISKKEFNDFYTIMKNNSDKSVLEVYNLYKSLRANNLMPKELINNKIK* |
JGI20151J14362_101256091 | 3300001346 | Pelagic Marine | MKHIPKKEFNRFYTIMKNNPGKSVLEXHNLYKKDIALEANNLMXKELITNKIK* |
JGI24006J15134_101915071 | 3300001450 | Marine | FNRFYTIMKNNPKNTVIENHALYQKELAKATEALEANNLMSKELLTNKIK* |
JGI24003J15210_101050552 | 3300001460 | Marine | MKHIPKKEFNRFYTIMKNNPGNSVIENHVLYQKELALEANNLMPKELLTNKIK* |
JGI24004J15324_101384783 | 3300001472 | Marine | MKHIPKKEFNRFYTIMKNNPKNTVIENHALYQKELAKATEALEANNLMSKELLTNKIK* |
GOS2224_10262583 | 3300001952 | Marine | MKHISKKEFNDFYTIMKNNSDKSVLEVYNLYRSLKANNLMPKELISNKIK* |
JGI24927J35514_10207301 | 3300002524 | Marine | LNNDNINVKLKTMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK* |
JGI26238J51125_10022431 | 3300003478 | Marine | MKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK* |
JGI26381J51731_10254846 | 3300003618 | Marine | MKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK* |
Ga0074648_100258518 | 3300005512 | Saline Water And Sediment | MKHINKKEFNDFYTIMKNNSDKSVLEVYNLYKSLRANNLMPKELISNKIK* |
Ga0075511_16257211 | 3300006402 | Aqueous | KHISKKEFNDFYTIMKNNSDKSVLEVYNLYKSLRANNLMPKELISNKIK* |
Ga0075486_16754811 | 3300006425 | Aqueous | FNDFYTIMKNNSDKSVLEVYNLYKSLRANNLMPKELISNKIK* |
Ga0101443_13483510 | 3300006617 | Marine Surface Water | MKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKDIALEANNLMPKELLTNKIK* |
Ga0098038_10670144 | 3300006735 | Marine | MKHINKKEFNDFYTIMKNNSDKSVMEVYNLYKNLKANNLMPKELLTNKIK* |
Ga0098038_12237411 | 3300006735 | Marine | MKHISKKEFDRFFTIMKNNPGNTVLENHELYKKEVALEANNLMPKELLTNKIK* |
Ga0098037_12686301 | 3300006737 | Marine | RFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK* |
Ga0098042_10013965 | 3300006749 | Marine | MKHINKKEFNDFYTIMKNNSDKSVMEVYTLYKNLKANNLMPKELLTNKIK* |
Ga0098042_10245412 | 3300006749 | Marine | MKHISKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELITNKIK* |
Ga0070748_12815971 | 3300006920 | Aqueous | MKHINKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANSLMPKELLTNKIK* |
Ga0098060_11478921 | 3300006921 | Marine | TMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK* |
Ga0098060_11603741 | 3300006921 | Marine | EFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK* |
Ga0070747_13132731 | 3300007276 | Aqueous | MKHIPKKEFNRFYTIMKNNPGKSVIENHVLYQKELALEANNLMPKELLTNKIK* |
Ga0102951_11033121 | 3300007725 | Water | NDNINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELITNKIK* |
Ga0102957_13699661 | 3300009027 | Pond Water | IPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK* |
Ga0115566_101254093 | 3300009071 | Pelagic Marine | MKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELITNKIK* |
Ga0115551_15137621 | 3300009193 | Pelagic Marine | LRLINDNINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELITNKIK* |
Ga0114994_101003993 | 3300009420 | Marine | LIKDNINVKTITMKHINKKEFNRFYTIMKENPGNSVIENHVLYSKERALEANNLMPKELLTNKIK* |
Ga0114998_104638622 | 3300009422 | Marine | MKITNQKEFNRFYTIMKNNPGNSVIENHVLYSKELALETNNLMPKELLTNKIK* |
Ga0114997_100667964 | 3300009425 | Marine | LNNDNINVKTITMKHINKKEFNRFYTIMKENPGNSVIENHVLYSKERALEANNLMPKELLTNKIK* |
Ga0115546_12214891 | 3300009435 | Pelagic Marine | KKEFNDFYTIMKNNSDKSVLEVYNLYKSLRANNLMPKELINNKIK* |
Ga0115571_14174223 | 3300009495 | Pelagic Marine | DNINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKDIALEANNLMPKELITNKIK* |
Ga0115570_103435023 | 3300009496 | Pelagic Marine | MKITNQKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELITNKIK* |
Ga0115000_107065293 | 3300009705 | Marine | NDNNNVKLKTMKHINKKEFNRFYTIMKENPGNSVIENHVLYSKERALEANNLMPKELLTNKIK* |
Ga0115001_103319351 | 3300009785 | Marine | LNNDNINVKTITMKHINKKEFNRFYTIMKENPGNSVIENHVLYSKELALEANNLMPKELLTNKIK* |
Ga0115001_105906621 | 3300009785 | Marine | MKITNQKEFNRFYTIMKNNPGNSVIENHVLYSKELALEANNLMPKELLTNKIK* |
Ga0098056_11354191 | 3300010150 | Marine | KKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK |
Ga0163179_109030585 | 3300012953 | Seawater | NRFYTIMKNNPGKSVLEIHNLYKKDIALEANNLMPKELLTNKIK* |
Ga0181369_10949701 | 3300017708 | Marine | IDNINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK |
Ga0181403_11234333 | 3300017710 | Seawater | LRLINDNINVKLKTMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK |
Ga0181391_11219251 | 3300017713 | Seawater | MKHISKKEFNRFYTIMKNNPENTILENHELYKKELALEANNLMPKELLTNKIK |
Ga0181398_10329501 | 3300017725 | Seawater | LRSINDNINVKLKTMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK |
Ga0181419_10982671 | 3300017728 | Seawater | KEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELITNKIK |
Ga0181419_11508631 | 3300017728 | Seawater | KEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK |
Ga0181396_10307871 | 3300017729 | Seawater | TMKHIPKKEFNRFYTIMKNNPGNTVLENHELYKKDIALEANNLMPKELLTNKIK |
Ga0181417_11725632 | 3300017730 | Seawater | MKHISKKEFNRFYTIMKNNPGKSVLEVHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK |
Ga0187218_10479681 | 3300017737 | Seawater | MKHISKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK |
Ga0181418_10212221 | 3300017740 | Seawater | LRLINDNINVKLKTMKHIPKKEFNRFYTIMKNNPGNTVLENHELYKKDIALEANNLMPKELLTNKIK |
Ga0181389_11958371 | 3300017746 | Seawater | MKHIPKKEFNRFYTIMKNNPGNTVLENHELYKKDIALEANNLMPKEL |
Ga0181400_10311721 | 3300017752 | Seawater | NVKLKTMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK |
Ga0181414_11297014 | 3300017759 | Seawater | NDNINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELLTNKIK |
Ga0181414_11402801 | 3300017759 | Seawater | NINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKI |
Ga0181413_12012171 | 3300017765 | Seawater | TMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLKKKDIALEANNLMPKELLTNKIK |
Ga0181413_12687981 | 3300017765 | Seawater | MKHISKKEFNRFYTIMKNNPENTILENHELYKKELALEANNLMSKELLTNKIK |
Ga0187221_10738842 | 3300017769 | Seawater | MKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMP |
Ga0181425_11576933 | 3300017771 | Seawater | INVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELLTNKIK |
Ga0181425_12845381 | 3300017771 | Seawater | INVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKDMALEANNLMPKELITNKIK |
Ga0181394_11526223 | 3300017776 | Seawater | MKNNPGKSVLEVHNLYKKENKQIEKDMLNTAIALEANNLMPKELITNKIK |
Ga0181395_11649812 | 3300017779 | Seawater | MKHISKKEFNRFYTIMKNNPENTILENHELYKKELALEANNLMPKELITNKIK |
Ga0181423_12554541 | 3300017781 | Seawater | LRLNNDNINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK |
Ga0181380_11954973 | 3300017782 | Seawater | MKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKEL |
Ga0206125_103775301 | 3300020165 | Seawater | MKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK |
Ga0211653_100925944 | 3300020421 | Marine | MKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELITNKIK |
Ga0211521_104097574 | 3300020428 | Marine | KKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK |
Ga0211576_106075951 | 3300020438 | Marine | FNRFYTIMKNNPGKSVLEVHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK |
Ga0211545_103086274 | 3300020452 | Marine | LRLNNDNNNVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK |
Ga0206123_102645932 | 3300021365 | Seawater | MKHISKKEFNDFYTIMKNNSDKSVLEVYNLYKSLRANNLMPKELINNKIK |
Ga0213868_101583294 | 3300021389 | Seawater | MKHISKKEFNDFYTIMKNNSDKSVLEVYNLYKSLRANNLMPKELISNKIK |
Ga0222717_105868861 | 3300021957 | Estuarine Water | NINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKENEQIEKDMLNTAIALEANNLMPKELLTNKIK |
Ga0222718_105935752 | 3300021958 | Estuarine Water | MKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK |
Ga0222716_103628653 | 3300021959 | Estuarine Water | MKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKENEQIEKDMLNTAIALEANNLMPKELLTNKIK |
Ga0222716_106152073 | 3300021959 | Estuarine Water | MKHIPKKEFNRFYTIMKNNPGNTVLENHELYKKELALEANNLMPKELITNKIK |
Ga0222719_106772773 | 3300021964 | Estuarine Water | ITMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK |
Ga0212021_11118441 | 3300022068 | Aqueous | INVKLKTMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK |
Ga0212022_10706591 | 3300022164 | Aqueous | MKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNRIK |
Ga0212022_10716732 | 3300022164 | Aqueous | LRSINDNINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK |
Ga0208157_10349233 | 3300025086 | Marine | MKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIN |
Ga0208157_10564764 | 3300025086 | Marine | MKHINKKEFNDFYTIMKNNSDKSVMEVYNLYKNLKANNLMPKELLTNKIK |
Ga0208434_10983452 | 3300025098 | Marine | MKHINKKEFNDFYTIMKNNSDKSVMEVYTLYKNLKANNLMPKELLTNKIK |
Ga0208159_10106842 | 3300025101 | Marine | MKHISKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELITNKIK |
Ga0208666_10027292 | 3300025102 | Marine | MKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKDIALEANNLMPKELLTNKIK |
Ga0209535_10158082 | 3300025120 | Marine | MKHIPKKEFNRFYTIMKNNPGNTVIENHVLYQKELALEANNLMPKELLTNKIK |
Ga0209194_11050913 | 3300025632 | Pelagic Marine | MKHISKKEFNDFYTIMKDNSDKSVLEVYNLYKSLRANNLMPKELINNKIK |
Ga0208643_10380771 | 3300025645 | Aqueous | KLKTMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK |
Ga0208134_10417252 | 3300025652 | Aqueous | MKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIVLEANNLMPKELLTNKIK |
Ga0209140_11517091 | 3300025688 | Marine | MKHIPKKEFNRFYTIMKNNPGNTVLENHELYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK |
Ga0209308_102589703 | 3300025869 | Pelagic Marine | MKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLM |
Ga0209932_10803501 | 3300026183 | Pond Water | FNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK |
Ga0208970_100452810 | 3300027298 | Marine | NDNINVKLKTMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK |
Ga0209709_101573701 | 3300027779 | Marine | MKHINKKEFNRFYTIMKENPGNSVIENHVLYSKERALEANNLMPKELLTNKIK |
Ga0209830_102508892 | 3300027791 | Marine | MKHINKKEFNRFYTIMKENPGNSVIENHVLYSKELALEANNLMPKELLTNKIK |
(restricted) Ga0233415_103993223 | 3300027861 | Seawater | MKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEQDMLDTAIALEANNLMPKELINNKIK |
Ga0257121_11279073 | 3300028198 | Marine | MKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELI |
Ga0302121_101136633 | 3300031626 | Marine | MKITNQKEFNRFYTIMKNNPGNSVIENHVLYSKELALEANNLMPKELLTNKIK |
Ga0315322_108061791 | 3300031766 | Seawater | NRFYTIMKNNPGKSVLEVHNLYKKENEQIEKDMLNTAIALEANNLMPKELLTNKIK |
Ga0315322_109449651 | 3300031766 | Seawater | MKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKENEQIEKDMLNTAIALEANNLMPK |
Ga0315315_117904042 | 3300032073 | Seawater | MKHIPKKEFNRFYTIMKNNPGNTVLENHELYKKDIALEANNLMPKELLTNKIK |
Ga0314858_065156_692_889 | 3300033742 | Sea-Ice Brine | LNNDNNNVKLKTMKHINKKEFNRFYTIMKENPGNSVIENHVLYSKERALEANNLMPKELLINKIK |
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