Basic Information | |
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Family ID | F093851 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 106 |
Average Sequence Length | 52 residues |
Representative Sequence | MLGYISTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLQGLQVEGYFD |
Number of Associated Samples | 81 |
Number of Associated Scaffolds | 106 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Viruses |
% of genes with valid RBS motifs | 76.42 % |
% of genes near scaffold ends (potentially truncated) | 25.47 % |
% of genes from short scaffolds (< 2000 bps) | 58.49 % |
Associated GOLD sequencing projects | 74 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Duplodnaviria (36.792 % of family members) |
NCBI Taxonomy ID | 2731341 |
Taxonomy | All Organisms → Viruses → Duplodnaviria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (18.868 % of family members) |
Environment Ontology (ENVO) | Unclassified (61.321 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (66.038 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 55.77% β-sheet: 0.00% Coil/Unstructured: 44.23% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Freshwater Freshwater Lake Freshwater And Sediment Freshwater Freshwater, Plankton Anoxic Zone Freshwater Freshwater Lake Freshwater Lake Lake Water Freshwater Freshwater Lake Sediment Aquatic Freshwater Freshwater Freshwater Pond Fresh Water Aqueous Freshwater To Marine Saline Gradient Estuarine Deep Subsurface Deep Subsurface Sediment |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
B570J14230_101857852 | 3300001282 | Freshwater | MLGYATTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLQGLQVEGYFD* |
B570J29606_100114510 | 3300002304 | Freshwater | MSDYKYLDTDLDDMIYALDSVLTTINSDDDPWLYNNTWRAMELLKGLKVKGFGND* |
B570J29606_10048932 | 3300002304 | Freshwater | MLGYIKEDLDDMINALDSVLTTINSDDDPWLYNNTERAKELLEGLWAEGYFD* |
B570J29032_1090442891 | 3300002408 | Freshwater | VDDMVYALDSVLTTINSDDDPWLYNNTWRAMDFLKGLQIEGYFD* |
B570J40625_100000109170 | 3300002835 | Freshwater | MLGYISTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAMDFLKGLQIEGYFD* |
B570J40625_1002126974 | 3300002835 | Freshwater | MQDYKYLDTDLDDMIYALDSVLTTINSDDDPWLYNNTWRAMELLKGLK |
JGI25914J50564_100692112 | 3300003429 | Freshwater Lake | MAILGYEVSDVDDMIYALDSVLTTINSDDDPWLYNNTWRAMECLKGLCAEGYFD* |
JGI25923J51411_10722873 | 3300003493 | Freshwater Lake | MAILGYEVSDVDDMIYALDSVLTTINSXDDPWLYNNTWRAMECLKGLCAEGYF |
Ga0063232_102035771 | 3300004054 | Freshwater Lake | MAILGYEVSDVDDMIYALDSVLTTINSDDDPWLYNNTWRAMECLKGLLTEGYFD* |
Ga0007797_11854982 | 3300004771 | Freshwater | MLGYTKEDLDDMINALDSVLTTINSDDDPWLYNNTERAKEFLQGLWAEGYFD* |
Ga0068876_103223913 | 3300005527 | Freshwater Lake | MLGYIETDVTDMIDALDSVLTTINSDDDPWLYNNTWRAKNLLEGLLAEGHIE* |
Ga0068872_102021572 | 3300005528 | Freshwater Lake | MLGYIETDVTDMIDALDSVLTTINSDDDPWLYNNTFRAKNLLEGLLAEGHIQ* |
Ga0068872_105618732 | 3300005528 | Freshwater Lake | MLGYIETDITDMIDALDSVLTTINSDDDPWLYNNTWRAKDLLEGLLAEGHVS* |
Ga0078117_10361053 | 3300005758 | Lake Water | MLGYKDTDVTDMIDALDSVLTTINSDDDPWLYNNTWRAKDLLEGLLAEGYVAE* |
Ga0070744_100767074 | 3300006484 | Estuarine | MAILGYEVSDVDDMIYALDSVLTTINSDDDPWLYNNTWRAKELLQGLQVEGYFD* |
Ga0103274_11928812 | 3300007202 | Freshwater Lake | MLGYKDTDVTDMIDALDSVLTTINSDDDPWLYNNTFRAKDLLEGLLAEGHINA* |
Ga0103958_105054513 | 3300007212 | Freshwater Lake | MLGYKYTDVTDMIDALDSVLTTINSDDDPWLYNNTWRAKDFLEGVLAEGRVQ* |
Ga0099848_12531603 | 3300007541 | Aqueous | MIMLGYATTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLKGLQVEGYFD* |
Ga0114340_10639502 | 3300008107 | Freshwater, Plankton | MQDYKYLDTDLDDMIYALDSVLTTINSDDDPWLYNNTWRAMELLKGLKVKGFGND* |
Ga0114341_103795843 | 3300008108 | Freshwater, Plankton | MQEYKYLDTDLDDMIYALDSVLTTINSDDDPWLYNNTWRAMELLKGLKVKGFGND* |
Ga0114346_10560619 | 3300008113 | Freshwater, Plankton | MLGYKDTDVTDMIDALDSVLTTINSDDDPWLYNNTFRAKDLLEGLLAEGHMNA* |
Ga0114346_12840942 | 3300008113 | Freshwater, Plankton | MLGYIETDVTDMIDALDSVLTTINSDDDPWLYNNTFRAKNLLEGLLAEGHIE* |
Ga0114350_1000048140 | 3300008116 | Freshwater, Plankton | MLGYIETDVRDMIDALDSVLTTINSDDDPWLYNNTFRAKDLLEGLLAEGHI* |
Ga0114350_10131122 | 3300008116 | Freshwater, Plankton | MLGYIETDVTDMIDALDSVLTTINSDDDPWLYNNTFRAKNLLEGLLAEGHVQ* |
Ga0114351_10419833 | 3300008117 | Freshwater, Plankton | MLGYASTDVTDMTNALDSVLSIINSDDDPWLYNNLWRAKNLLEGLVAQGHIQ* |
Ga0114355_10335344 | 3300008120 | Freshwater, Plankton | MLGYIETDITDMIDALDSVLTTINSDDDPWLYNNTWRAKDLLEGLLAEGHIQ* |
Ga0114355_10446145 | 3300008120 | Freshwater, Plankton | MLGYIETDVTDMIDALDSVLTTINSDDDPWLYNNTWRAKDLLEGLLAEGHLQ* |
Ga0114355_11224652 | 3300008120 | Freshwater, Plankton | MQEYKYLDTDLDDMIYALDSVLTTINSDDDPWLYNNTWRAMELLKGLKVKGFVND* |
Ga0114363_10248726 | 3300008266 | Freshwater, Plankton | MQEYKYLDTDLDDMIYALDSVLTTINSDDDPWLYNNT |
Ga0114363_11393252 | 3300008266 | Freshwater, Plankton | MLGYIETDVTDMIDALDSVLTTINSDDDPWLYNNTWRAKDLLEGLLAEGHVS* |
Ga0104242_10179302 | 3300008962 | Freshwater | MLGYTREDLDDMVYALDSVLTTINSDDDPWLYNNTWRAKEFLQGLWAEGYFD* |
Ga0114980_102996412 | 3300009152 | Freshwater Lake | MLGYIKEDLDDMINALDSVLTTINSDDDPWLYNNTERAKEFLEGLWAEGYFD* |
Ga0114980_106891452 | 3300009152 | Freshwater Lake | MLGYISTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLQGLQVEGYFD* |
Ga0129333_110680641 | 3300010354 | Freshwater To Marine Saline Gradient | MYRGEEMLGYKDTDVTDMIDALDSVLTTINSDDDPWLYNNTWRAMDLLQGLLAEGHVQ* |
Ga0136551_10087074 | 3300010388 | Pond Fresh Water | MLGYEMSDVDDMIYALDSVLTTINSDDDPWLYNNTWRAMDFLKGLQAEGYFNG* |
Ga0136709_10656831 | 3300011184 | Freshwater | KVLGRVMLGYISTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLQGLQVEGYFD* |
Ga0153801_10110255 | 3300012017 | Freshwater | MLGYATTDLDDMIYALDSVLTTINSDDDPWLYNNTWRAMDFLKGLQIEGYFD* |
Ga0157593_10425442 | 3300012699 | Freshwater | ETGIHLNHSLTIWKRLLTIMGSMLGYEATDLDDMINALDSVLTTINSDDDPWLYNNTWRALNFLQGLWAEGYFD* |
Ga0164293_109130591 | 3300013004 | Freshwater | MGGIMLDYATTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLQGLQVEGYFG* |
Ga0164293_110648782 | 3300013004 | Freshwater | MSDYKYLDTDLDDMIYALDSVLTTINSDDDPWLYNNTWRAMELLKGLKVKGVGND* |
Ga0164294_1000018126 | 3300013006 | Freshwater | MLGYISTDVDDMVYALDSVLTTINSNDDPWLYNNTWRAKELLQGLQVEGYFDNVD* |
Ga0181359_10222855 | 3300019784 | Freshwater Lake | MAILGYEVSDVDDMIYALDSVLTTINSDDDPWLYNNTWRAMECLKGLCAEGYFD |
Ga0207193_18157301 | 3300020048 | Freshwater Lake Sediment | YSKILGRAMLGYISTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLQGLQVEGYFD |
Ga0211732_14315245 | 3300020141 | Freshwater | MLGYVSTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKDLLQGLQVEGYFD |
Ga0208091_10034634 | 3300020506 | Freshwater | MLGYISTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAMDFLKGLQIEGYFD |
Ga0208091_10106054 | 3300020506 | Freshwater | MQDYKYLDTDLDDMIYALDSVLTTINSDDDPWLYNNTWRAMELLKGLKVKGVGND |
Ga0208090_10078503 | 3300020513 | Freshwater | MSDYKYLDTDLDDMIYALDSVLTTINSDDDPWLYNNTWRAMELLKGLKVKGFGND |
Ga0208858_10482823 | 3300020524 | Freshwater | AMLGYISTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLQGLQVEGYFD |
Ga0208232_10403182 | 3300020527 | Freshwater | MQDYKYIDTDLDDMIYALDSVLTTINSDDDPWLYNNTWRAMELLKGLKVKGVGND |
Ga0208233_10057469 | 3300020529 | Freshwater | TDVDDMVYALDSVLTTINSDDDPWLYNNTWRAMDFLKGLQIEGYFD |
Ga0208235_10174534 | 3300020530 | Freshwater | MLGYATTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLQGLQVEGYFD |
Ga0208364_10415033 | 3300020533 | Freshwater | MLGYISTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLQG |
Ga0207942_10240542 | 3300020549 | Freshwater | MQDYKYIDTDLDDMIYALDSVLTTINSDDDPWLYNNTWRAMELLKGLKVKGFGND |
Ga0208231_100101022 | 3300020557 | Freshwater | STDVDDMVYALDSVLTTINSDDDPWLYNNTWRAMDFLKGLQIEGYFD |
Ga0208231_10073772 | 3300020557 | Freshwater | MQDYKYLYTDLDDMIYALDSVLTTINSDDDPWLYNNTWRAMELLKGLKVKGFGND |
Ga0208231_10495371 | 3300020557 | Freshwater | STDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLQGLQVEGYFD |
Ga0214170_10324362 | 3300020731 | Freshwater | MLGYESTDLDDMISALDSVLTTINSDDDPWLYNNTWRALDFLKGLLAENRI |
Ga0214170_10562582 | 3300020731 | Freshwater | RLLTIMGSMLGYESTDLDDMINALDSVLTTINSDDDPWLYNNTWRALNFLQGLWAEGYFD |
Ga0214172_10230792 | 3300020733 | Freshwater | MGSMLGYESTDLDDMINALDSVLTTINSDDDPWLYNNTWRALNFLQGLWAEGYFD |
Ga0214168_100878111 | 3300021140 | Freshwater | IKEDLDDMINALDSVLTTINSDDDPWLYNNTERAKELLEGLWAEGYFD |
Ga0194047_100213662 | 3300021354 | Anoxic Zone Freshwater | MLGYISTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLQGLQVEGYFD |
Ga0194048_100161064 | 3300021519 | Anoxic Zone Freshwater | MAILGYEVSDVDDMIYALDSVLTTINSDDDPWLYNNTWRAMECLKGLLTEGYFD |
Ga0196905_11458621 | 3300022198 | Aqueous | DVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLKGLQVEGYFD |
Ga0214917_100095427 | 3300022752 | Freshwater | MLGYRDTDVIDMVNALDSALLMINSDDDPWLYNNVWRAKDFLEGLLAEGRI |
Ga0214921_1000665234 | 3300023174 | Freshwater | MPLVGYESVDADDMIIALDSVLTTINSDDDPWLYNNTWRAMDLLKGLQAEGYFD |
Ga0255147_10180312 | 3300024289 | Freshwater | MLGYKDTDVTDMVDALDSALLMINSDDDPWLYNNVWRAKDFLEGLLAEGRI |
Ga0244775_100225847 | 3300024346 | Estuarine | MAILGYEVSDVDDMIYALDSVLTTINSDDDPWLYNNTWRAKELLQGLQVEGYFD |
Ga0207954_10458665 | 3300025606 | Freshwater | MLGYTKEDLDDMINALDSVLTTINSDDDPWLYNNTERAKEFLQGLWAEGYFD |
Ga0208161_11656364 | 3300025646 | Aqueous | MLGYATTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLKGLQVEGYFD |
Ga0208388_10164974 | 3300025778 | Freshwater | MLGYEVSDVDDMIYALDSVLTTINSDDDPWLYNNTWRAMECLKGLCAEGYFD |
Ga0255116_10006371 | 3300027124 | Freshwater | MAILGYEVSDVDDMIYALDSVLTTINSDDDPWLYNNTWRAMECLKGLLTEGY |
Ga0209599_1000369713 | 3300027710 | Deep Subsurface | MLGYIKEDLDDMINALDSVLTTINSDDDPWLYNNTERAKELLEGLWAEGYFD |
Ga0209596_12945843 | 3300027754 | Freshwater Lake | MLGYTREDLDDMVYALDSVLTTINSDDDPWLYNNTWRAKEFLQGLWAEGYFD |
Ga0209972_101759862 | 3300027793 | Freshwater Lake | MLGYIETDVTDMIDALDSVLTTINSDDDPWLYNNTFRAKNLLEGLLAEGHIQ |
Ga0209229_102862313 | 3300027805 | Freshwater And Sediment | MLGYISTDVDDMVYALDSLLTTINSDDDPWLYNNTWRAKELLKGLQVEGYFD |
Ga0209229_103871431 | 3300027805 | Freshwater And Sediment | MLGYAATDVEDMIYALDSVLTTINSDDDPWLYNNTWRAMELLRGLQAEGYFD |
Ga0209990_101684303 | 3300027816 | Freshwater Lake | MLGYIETDVTDMIDALDSVLTTINSDDDPWLYNNTWRAKNLLEGLLAEGHIE |
Ga0209990_105105741 | 3300027816 | Freshwater Lake | MLGYIETDVRDMIDALDSVLTTINSDDDPWLYNNTFRAK |
Ga0209550_104945013 | 3300027892 | Freshwater Lake | MIAGYISTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLQGLQVEGYFD |
Ga0209298_100037493 | 3300027973 | Freshwater Lake | MLGYIKEDLDDMINALDSVLTTINSDDDPWLYNNTERAKEFLEGLWAEGYFD |
Ga0247723_100171720 | 3300028025 | Deep Subsurface Sediment | MLGYAATDVDDMIYALDSVLTTINSDDDPWLYNNTWRAMELLRGLQAEGYFDND |
Ga0247723_10211924 | 3300028025 | Deep Subsurface Sediment | MQESKYLDTDLDDMIYALDSVLTTINSDDDPWLYNNTWRAMELLKGLKVKGVGND |
Ga0119944_10032884 | 3300029930 | Aquatic | MLGYQVSDVTDMTSALDSVLTTINSDDDPWLYNNVWRAKDLLDGLIATGHIQ |
Ga0315907_100316033 | 3300031758 | Freshwater | MQDYKYLDTDLDDMIYALDSVLTTINSDDDPWLYNNTWRAMELLKGLKVKGFGND |
Ga0315907_100773191 | 3300031758 | Freshwater | MLGYASTDVTDMTNALDSVLSIINSDDDPWLYNNLWRAKNLLEGLVAQGHIQ |
Ga0315900_1000197652 | 3300031787 | Freshwater | MLGYIETDVRDMIDALDSVLTTINSDDDPWLYNNTFRAKDLLEGLLAEGHI |
Ga0315900_100854003 | 3300031787 | Freshwater | MLGYIETDITDMIDALDSVLTTINSDDDPWLYNNTWRAKDLLEGLLAEGHVS |
Ga0315909_100101137 | 3300031857 | Freshwater | MLGYIETDVTDMIDALDSVLTTINSDDDPWLYNNTFRAKNLLEGLLAEGHVQ |
Ga0315909_101241195 | 3300031857 | Freshwater | MLGYIETDVTDMIDALDSVLTTINSDDDPWLYNNTWRAKDLLEGLLAEGHLQ |
Ga0315909_109505271 | 3300031857 | Freshwater | MQEYKYLDTDLDDMIYALDSVLTTINSDDDPWLYNNTWRAMELLK |
Ga0315904_112573752 | 3300031951 | Freshwater | MQEYKYLDTDLDDMIYALDSVLTTINSDDDPWLYNNTWRAMELLKGLKVKGFGND |
Ga0315902_103004631 | 3300032093 | Freshwater | VTDMIDALDSVLTTINSDDDPWLYNNTFRAKNLLEGLLAEGHIQ |
Ga0334980_0005537_5505_5648 | 3300033816 | Freshwater | MLGYISTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLQGLQVE |
Ga0334996_0389431_230_397 | 3300033994 | Freshwater | MQEYKYLDTDLDDMIYALDSVLTTINSDDDPWLYNNTWRAIELLKGLKVKGFGND |
Ga0334995_0524256_213_380 | 3300034062 | Freshwater | MSDYKYLDTDLDDMIYALDSVLTTINSDDDPWLYNNTWRAMELLKGLKVKGVGND |
Ga0335019_0028026_3745_3891 | 3300034066 | Freshwater | ISTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLQGLQAEGYFD |
Ga0335019_0238947_1022_1159 | 3300034066 | Freshwater | MLGYISTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLQGLQ |
Ga0335019_0594679_1_147 | 3300034066 | Freshwater | ISTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLQGLQVEGYFD |
Ga0335027_0117369_180_338 | 3300034101 | Freshwater | MLGYIKEDLDDMINALDSVLTTINSDDDPWLYNNTWRAMDFLKGLQIEGYFD |
Ga0335027_0354247_325_483 | 3300034101 | Freshwater | MLGYATTDLDDMIYALDSVLTTINSDDDPWLYNNTWRAMDFLKGLQIEGYFD |
Ga0335031_0024606_4286_4408 | 3300034104 | Freshwater | MQDYKYLDTDLDDMIYALDSVLTTINSDDDPWLYNNTWRAM |
Ga0335066_0495821_510_647 | 3300034112 | Freshwater | MLGYATTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLQGLQ |
Ga0335017_0010671_4194_4352 | 3300034167 | Freshwater | MLGYIRTDVDDMVYALDSVLTTINSDDDPWLYNNTWRAKELLQGLQVEGYFD |
Ga0335049_0005321_4056_4223 | 3300034272 | Freshwater | MSDYKYLDTDLDDMIYALDSVITTINSDDDPWLYNNTWRAMELLKGLKVKGFGND |
Ga0335049_0397091_2_130 | 3300034272 | Freshwater | DMVYALDSVLTTINSDDDPWLYNNTWRAKELLQGLQAEGYFD |
Ga0335007_0079735_3_122 | 3300034283 | Freshwater | MQDYKYLDTDLDDMIYALDSVLTTINSDDDPWLYNNTWRA |
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