Metagenome / Metatranscriptome Family F093644

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093644
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	58 residues
Representative Sequence	MGANPTQAVGVTAFLLAFTALAGAIYAGSILLYVVAAAFLAGSVAIFRKVKPLEQAEN
Number of Associated Samples	77
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.13 %
% of genes near scaffold ends (potentially truncated)	20.75 %
% of genes from short scaffolds (< 2000 bps)	65.09 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.509 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (41.509 % of family members)
Environment Ontology (ENVO)	Unclassified (34.906 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.509 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 82.76% β-sheet: 0.00% Coil/Unstructured: 17.24%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00909	Ammonium_transp	33.96
PF07642	BBP2	21.70
PF00543	P-II	10.38
PF02837	Glyco_hydro_2_N	1.89
PF08531	Bac_rhamnosid_N	1.89
PF00072	Response_reg	0.94
PF01408	GFO_IDH_MocA	0.94
PF09969	DUF2203	0.94
PF13307	Helicase_C_2	0.94
PF01261	AP_endonuc_2	0.94
PF12969	DUF3857	0.94
PF06463	Mob_synth_C	0.94
PF00999	Na_H_Exchanger	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	33.96
COG0347	Nitrogen regulatory protein PII	Signal transduction mechanisms [T]	10.38
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	1.89
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.94
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.94
COG2896	GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)	Coenzyme transport and metabolism [H]	0.94
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.94
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.94
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.51 %
Unclassified	root	N/A	8.49 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.51 %
Unclassified	root	N/A	8.49 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.51 %
Unclassified	root	N/A	8.49 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	77.36 %
Unclassified	root	N/A	8.49 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	46.23 %
Unclassified	root	N/A	8.49 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	33.96 %
Unclassified	root	N/A	8.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.77 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	33.96 %
Unclassified	root	N/A	8.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.77 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	2.83 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	13.21 %
Unclassified	root	N/A	8.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.77 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	2.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	13.21 %
Unclassified	root	N/A	8.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.77 %
unclassified Candidatus Solibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter	1.89 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	13.21 %
Unclassified	root	N/A	8.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.77 %
Candidatus Solibacter sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	1.89 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10002601	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	13199	Open in IMG/M
3300000567\|JGI12270J11330_10006392	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8206	Open in IMG/M
3300002557\|JGI25381J37097_1044202	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300002557\|JGI25381J37097_1085296	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300003218\|JGI26339J46600_10002684	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5372	Open in IMG/M
3300004152\|Ga0062386_100351811	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1181	Open in IMG/M
3300004470\|Ga0068967_1258549	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300005167\|Ga0066672_10196136	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1285	Open in IMG/M
3300005175\|Ga0066673_10498826	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300005180\|Ga0066685_10829464	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	624	Open in IMG/M
3300005186\|Ga0066676_10259760	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300005446\|Ga0066686_10196885	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1349	Open in IMG/M
3300005554\|Ga0066661_10823897	Not Available	543	Open in IMG/M
3300005557\|Ga0066704_10734051	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300005559\|Ga0066700_10163503	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1517	Open in IMG/M
3300006791\|Ga0066653_10410387	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300006796\|Ga0066665_10245048	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1415	Open in IMG/M
3300007258\|Ga0099793_10213079	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	928	Open in IMG/M
3300007258\|Ga0099793_10312765	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	764	Open in IMG/M
3300007258\|Ga0099793_10345635	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	726	Open in IMG/M
3300007265\|Ga0099794_10047551	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2057	Open in IMG/M
3300007265\|Ga0099794_10092623	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1501	Open in IMG/M
3300009012\|Ga0066710_101022881	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1276	Open in IMG/M
3300009038\|Ga0099829_10163019	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1786	Open in IMG/M
3300009088\|Ga0099830_10103548	All Organisms → cellular organisms → Bacteria → Acidobacteria	2128	Open in IMG/M
3300009088\|Ga0099830_11719226	Not Available	524	Open in IMG/M
3300009518\|Ga0116128_1000016	All Organisms → cellular organisms → Bacteria	162475	Open in IMG/M
3300009518\|Ga0116128_1013430	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2880	Open in IMG/M
3300009521\|Ga0116222_1177710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	916	Open in IMG/M
3300009523\|Ga0116221_1257370	All Organisms → cellular organisms → Bacteria → Acidobacteria	754	Open in IMG/M
3300009839\|Ga0116223_10128454	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1586	Open in IMG/M
3300010339\|Ga0074046_10005595	All Organisms → cellular organisms → Bacteria	10024	Open in IMG/M
3300010339\|Ga0074046_10051508	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2734	Open in IMG/M
3300010339\|Ga0074046_10245374	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1113	Open in IMG/M
3300010343\|Ga0074044_10607183	Not Available	714	Open in IMG/M
3300011269\|Ga0137392_10566733	All Organisms → cellular organisms → Bacteria → Acidobacteria	943	Open in IMG/M
3300011270\|Ga0137391_11495293	Not Available	520	Open in IMG/M
3300011271\|Ga0137393_10049680	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3276	Open in IMG/M
3300012189\|Ga0137388_10628650	All Organisms → cellular organisms → Bacteria → Acidobacteria	998	Open in IMG/M
3300012200\|Ga0137382_10530988	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300012200\|Ga0137382_10577324	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	802	Open in IMG/M
3300012203\|Ga0137399_10398969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1147	Open in IMG/M
3300012203\|Ga0137399_10998091	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	705	Open in IMG/M
3300012203\|Ga0137399_11046464	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	687	Open in IMG/M
3300012203\|Ga0137399_11473645	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	567	Open in IMG/M
3300012203\|Ga0137399_11519230	Not Available	557	Open in IMG/M
3300012205\|Ga0137362_10095673	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2494	Open in IMG/M
3300012205\|Ga0137362_10128054	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2158	Open in IMG/M
3300012211\|Ga0137377_10010374	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7800	Open in IMG/M
3300012351\|Ga0137386_10904376	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	632	Open in IMG/M
3300012362\|Ga0137361_10313128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1437	Open in IMG/M
3300012362\|Ga0137361_10523050	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300012685\|Ga0137397_10001361	All Organisms → cellular organisms → Bacteria → Acidobacteria	17084	Open in IMG/M
3300012918\|Ga0137396_10530683	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300012918\|Ga0137396_10965705	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300012922\|Ga0137394_10109100	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2336	Open in IMG/M
3300012925\|Ga0137419_10203255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1468	Open in IMG/M
3300012927\|Ga0137416_10185681	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1658	Open in IMG/M
3300012927\|Ga0137416_10883267	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300012927\|Ga0137416_11799654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300014151\|Ga0181539_1044800	All Organisms → cellular organisms → Bacteria → Acidobacteria	2134	Open in IMG/M
3300014151\|Ga0181539_1097829	All Organisms → cellular organisms → Bacteria → Acidobacteria	1242	Open in IMG/M
3300014152\|Ga0181533_1027515	All Organisms → cellular organisms → Bacteria	3398	Open in IMG/M
3300014494\|Ga0182017_10000076	All Organisms → cellular organisms → Bacteria → Acidobacteria	71322	Open in IMG/M
3300015054\|Ga0137420_1040109	All Organisms → cellular organisms → Bacteria → Acidobacteria	1951	Open in IMG/M
3300015054\|Ga0137420_1359149	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	551	Open in IMG/M
3300015245\|Ga0137409_10001747	All Organisms → cellular organisms → Bacteria	23503	Open in IMG/M
3300017823\|Ga0187818_10048792	All Organisms → cellular organisms → Bacteria → Acidobacteria	1819	Open in IMG/M
3300017925\|Ga0187856_1000017	All Organisms → cellular organisms → Bacteria → Acidobacteria	162475	Open in IMG/M
3300017929\|Ga0187849_1018531	All Organisms → cellular organisms → Bacteria → Acidobacteria	4023	Open in IMG/M
3300017933\|Ga0187801_10392200	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300018005\|Ga0187878_1038461	All Organisms → cellular organisms → Bacteria → Acidobacteria	2254	Open in IMG/M
3300018086\|Ga0187769_10621565	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	817	Open in IMG/M
3300018088\|Ga0187771_10601964	Not Available	932	Open in IMG/M
3300018088\|Ga0187771_11631363	Not Available	547	Open in IMG/M
3300018433\|Ga0066667_10011774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4256	Open in IMG/M
3300018482\|Ga0066669_10180247	All Organisms → cellular organisms → Bacteria → Acidobacteria	1592	Open in IMG/M
3300019788\|Ga0182028_1436866	All Organisms → cellular organisms → Bacteria	2279	Open in IMG/M
3300019885\|Ga0193747_1000100	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	43730	Open in IMG/M
3300021086\|Ga0179596_10418912	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300021151\|Ga0179584_1379459	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	640	Open in IMG/M
3300024288\|Ga0179589_10082916	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1280	Open in IMG/M
3300025409\|Ga0208321_1014521	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300026295\|Ga0209234_1002458	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7028	Open in IMG/M
3300027625\|Ga0208044_1026353	All Organisms → cellular organisms → Bacteria → Acidobacteria	2015	Open in IMG/M
3300027643\|Ga0209076_1021552	All Organisms → cellular organisms → Bacteria → Acidobacteria	1755	Open in IMG/M
3300027643\|Ga0209076_1139037	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300027663\|Ga0208990_1030444	All Organisms → cellular organisms → Bacteria → Acidobacteria	1715	Open in IMG/M
3300027671\|Ga0209588_1002570	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4930	Open in IMG/M
3300027825\|Ga0209039_10000151	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	63461	Open in IMG/M
3300027825\|Ga0209039_10007208	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7145	Open in IMG/M
3300027825\|Ga0209039_10161135	All Organisms → cellular organisms → Bacteria → Acidobacteria	929	Open in IMG/M
3300027854\|Ga0209517_10008003	All Organisms → cellular organisms → Bacteria → Acidobacteria	12481	Open in IMG/M
3300027875\|Ga0209283_10365619	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	944	Open in IMG/M
3300028536\|Ga0137415_10003862	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14859	Open in IMG/M
3300030659\|Ga0316363_10096724	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1317	Open in IMG/M
3300032160\|Ga0311301_10000936	All Organisms → cellular organisms → Bacteria → Acidobacteria	112123	Open in IMG/M
3300033402\|Ga0326728_10002028	All Organisms → cellular organisms → Bacteria → Acidobacteria	68954	Open in IMG/M
3300033402\|Ga0326728_10020561	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	12566	Open in IMG/M
3300033402\|Ga0326728_10080314	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4191	Open in IMG/M
3300033402\|Ga0326728_11006547	Not Available	576	Open in IMG/M
3300033405\|Ga0326727_10081204	All Organisms → cellular organisms → Bacteria	4515	Open in IMG/M
3300033405\|Ga0326727_10372766	All Organisms → cellular organisms → Bacteria → Acidobacteria	1333	Open in IMG/M
3300033755\|Ga0371489_0271799	Not Available	832	Open in IMG/M
3300034091\|Ga0326724_0190860	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1225	Open in IMG/M
3300034681\|Ga0370546_074174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.91%
Aquatic	Environmental → Aquatic	15.09%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.36%
Freshwater	Environmental → Aquatic → Freshwater	15.09%
Peat	Environmental → Terrestrial → Peat	7.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.98%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.49%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.55%
Loam	Environmental → Terrestrial → Soil → Loam	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.15%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.60%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.94%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	41.51%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.49%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	7.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.66%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.72%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	3.77%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004470	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 59 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025409	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150 (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100026016	3300000567	Peatlands Soil	MGANPTQAVGVTIFLLAFTALAGAIYAGSILLYIVAAALLAGSIAIFRKIKPLEQAEN*
JGI12270J11330_100063926	3300000567	Peatlands Soil	MGANPTQAVGVTAFLLAFTALAGAIYAGSILLYLVAAAFLAGSIAIFRKIKPLEQAEN*
JGI25381J37097_10442022	3300002557	Grasslands Soil	MGANPTQAVGITAFLLGFTALSGALYAGSILLYIVTIALLAASVAALRKAKPLENAEN*
JGI25381J37097_10852962	3300002557	Grasslands Soil	MGANSTQAVGVTAFLLGFTVFSGAMYAGSVLLYVVAAALLAGSVAAFRKAKPLEHVEN*
JGI26339J46600_100026842	3300003218	Bog Forest Soil	MGANPTQAVGVTVFLLAFTALAGAIYAGSVLLYLVAAALLAGSIAIFRKIKPLEQAEN*
Ga0062386_1003518112	3300004152	Bog Forest Soil	MGANPTQAVGVAIFLLAFTALAGAIYAGSFLLYLVAVAFLAGSIAIFRKVKPLEQAEN*
Ga0068967_12585492	3300004470	Peatlands Soil	MGANPTQAVGVTIFLLAFTALAGAIYAGGFLLYLVAVAFLAGSIAIFRKVKPLEQAEN*
Ga0066672_101961362	3300005167	Soil	MGANPTQAVGITAFLLGFTALSGALYAGSILLYIVTIALLAASVAAFRKAKPLENAEN*
Ga0066673_104988261	3300005175	Soil	MGANSTQAVGVTAFLLGFTVFSGAMYAGSVLLYVVAAALLAGSVAAFRKAKPLEHMEN*
Ga0066685_108294641	3300005180	Soil	REYAMGANSTQALGTTAFLLGFTALSGGIYAGKFILYVVAVLLLAGSVAAFRKCRPLEHVEN*
Ga0066676_102597603	3300005186	Soil	MGANSTQAVGITAFLLGFTAFSGAMYAGSVLLYVVAAALLAGSVAAFRKAKPLEHVEN*
Ga0066686_101968853	3300005446	Soil	MGANSTQAVGVTAFLLGFTVFSGAMYAGSVLLYVVAAALLAASVAAFRKAKPLEHVEN*
Ga0066661_108238971	3300005554	Soil	MGANSTQALGTTAFLLGFTALSGGIYAGKFILYVVAVLLLAGSVAAFRKCRPLEHVEN*
Ga0066704_107340512	3300005557	Soil	MGANSTQAVGITAFLLGFTAFSGAMYAGSVLLYIVAAALLAGSVVAFRKAKPLEHVEN*
Ga0066700_101635032	3300005559	Soil	MGANSTQAVGITAFLLGFTAFSGAMYAGSVLLYVVAAALLAASVAAFRKAKPLEHVEN*
Ga0066653_104103872	3300006791	Soil	MGANSTQAVGTTAFLLGFTALSGGIYGGKFILYVVAVLLLAGSVAAFRKCKPLEHV
Ga0066665_102450483	3300006796	Soil	MGANPTQAVGITAFLLGFTVLSGAIYGGKILLYVVAVALLAGSVAAFLKAKPLEQVEN*
Ga0099793_102130793	3300007258	Vadose Zone Soil	MGANPSQAVGITAFLLGFTALSGALYAGSILLYIVTIALLAASVAAFRKAKPLENAEN*
Ga0099793_103127653	3300007258	Vadose Zone Soil	AMGANPTQAVGVAAFLLGFTVLSGAIYGGKILLYIVAVALLAGSVAAFLKAKPLEQAEN*
Ga0099793_103456351	3300007258	Vadose Zone Soil	MGREHAMGANPTQAVGITAFLLGFTVLSGAIYGGKILLYIVAVALLAGSVAAFLKAKPLEQVEN*
Ga0099794_100475513	3300007265	Vadose Zone Soil	MGREHAMGANPTQAVGITAFLLGFTVLSGAIYGGKILLYIVAAALLAGSVAAFLKAKPLEQVEN*
Ga0099794_100926233	3300007265	Vadose Zone Soil	MGANPTQAVGITAFLLGFTVLSGAIYGGKILLYIVAVALLAGSVAAFLKAKPLEQVEN*
Ga0066710_1010228812	3300009012	Grasslands Soil	MGANSTQAVGITAFLLGFTAFSGAMYAGSVLLYVVAAALLAASVAAFRKAKPLEHVEN
Ga0099829_101630192	3300009038	Vadose Zone Soil	MGANPTQAVGVTAFLLGFTVLSGAIYGGKILLYILAAALLAGSVAAFLKAKPLEQVEN*
Ga0099830_101035482	3300009088	Vadose Zone Soil	MGANPTQAVGITAFLLGFTVLSGAIYGGKILLYILAAALLAGSVAAFLKAKPLEQVEN*
Ga0099830_117192262	3300009088	Vadose Zone Soil	MGANSTQAVGITAFLLGFTALSGGMYAGKISLYVVAVLLLAGSVAAFRKFKPLEHVDS*
Ga0116128_1000016134	3300009518	Peatland	MGANPTQAVGVTVYLLAFTALAGAIYAGSVLLYLVAAAFLAGSLAIFRKIKPLEQAEN*
Ga0116128_10134302	3300009518	Peatland	MGANPTQAVGVTIFLLAFTALAGAIYAGSFLLYLVAAAFLAGSFAIFRRIKPLEQAEN*
Ga0116222_11777101	3300009521	Peatlands Soil	GANPTQAVGVTIFLLAFTALAGAIYAGGFLLYLVAVAFLAGSIAIFRKVKPLEQAEN*
Ga0116221_12573702	3300009523	Peatlands Soil	MGANPTQAVGVTIFLLAFTALAGAIYARSILLYIVAAALLAGSIAIFRKIKPLEQAEN*
Ga0116223_101284543	3300009839	Peatlands Soil	AMGANPTQAVGVTAFLLAFTALAGAIYAGSILLYLVAAAFLAGSIAIFRKIKPLEQAEN*
Ga0074046_1000559513	3300010339	Bog Forest Soil	MGANPTQAVGVTIFLLAFTALAGAIYAGSLLLYLVAVAFLAGSIAIFRKVKPLEQAEN*
Ga0074046_100515083	3300010339	Bog Forest Soil	MGANPTQAVGVTVFLLAFTALAGAIYAGSVLLYLVAAAFLAGSLAIFRKIKPLEQAEN*
Ga0074046_102453741	3300010339	Bog Forest Soil	MGANPAQAIGVTVFLLAFTALAGAIYAGSVLLYLAAAAFLAGSLAVFRKIKPLEQAEN*
Ga0074044_106071831	3300010343	Bog Forest Soil	MGANPAQAIGVTVFLLAFTALAGAIYAGSVLLYLAAAAFLAGSLAVFQKIKPLEQAEN*
Ga0137392_105667331	3300011269	Vadose Zone Soil	IGREHAMGANPTQAVGVTAFLLGFTVLSGAIYGGKILLYILAAALLAGSVAAFLKAKPLEQVEN*
Ga0137391_114952933	3300011270	Vadose Zone Soil	TAFLLGFTALSGGMYAGKISLYVVAVLLLAGSVAAFRKCKPLEHVES*
Ga0137393_100496802	3300011271	Vadose Zone Soil	MGANSTQAVGITAFLLGFTALSGGMYAGKISLYVVAVLLLAGSVAAFRKFKPLEHVES*
Ga0137388_106286501	3300012189	Vadose Zone Soil	MGANPTQAVGVTAFLLGFTVLSGAIYGGKILLYILAAALLAGPVAAFLKAKPLEQVEN*
Ga0137382_105309883	3300012200	Vadose Zone Soil	VGITAFLLGFTALSGALYAGSILLYIVTIALLAASVAAFRKAKPLENAEN*
Ga0137382_105773242	3300012200	Vadose Zone Soil	MGANSTQAVGITAFLLGFTVFSGAMYAGSVLLYVVAAALLAGSVAAFRKAKPLEHVEN*
Ga0137399_103989692	3300012203	Vadose Zone Soil	MGANPSQAVGITAFLLGFTALSGALYAGSILLYIVTIALLAASGAAFRKAKPLENAEN*
Ga0137399_109980912	3300012203	Vadose Zone Soil	MGANSTQAVGVTAFLLAFTAFSGAMYAGSVLLYVVAAALLAGSVAAFRKAKPLEHAEN*
Ga0137399_110464641	3300012203	Vadose Zone Soil	ANPTQALGTTAFLLGFTALSGGIYAGKFILYVVAVLLLAGSVAAFRKCKPLEHVEN*
Ga0137399_114736451	3300012203	Vadose Zone Soil	LKIRFEIGRKYEMGANPTQAVGITAFLLGFTAFSGAMYAGSVLLYVVAAALLAGSV
Ga0137399_115192302	3300012203	Vadose Zone Soil	MGANPTQAVGITAFLLGFTALSGALYAGSILLYIVTIALLAGSVAAFRKVKPLENAEN*
Ga0137362_100956731	3300012205	Vadose Zone Soil	PNQAVGITAFLLGFTALSGALYAGSILLYIVTIALLAASVAAFRKAKPLENAEN*
Ga0137362_101280543	3300012205	Vadose Zone Soil	MGANPTQAVGITAFLLGFTAFSGAMYAGSVLLYIVAAALLAGSVVAFRKAKPLEHVEN*
Ga0137377_100103747	3300012211	Vadose Zone Soil	MGANPTQAVGITAFLLGFTTLSGALYAGSILLYIVTIALLAASVAAFRKAKPLENAEN*
Ga0137386_109043761	3300012351	Vadose Zone Soil	GRDDAMGANPTQAVGMTAFLLGFTALSGALYAGSILLYIVTIALLAASVAAFRKAKPLENAEN*
Ga0137361_103131281	3300012362	Vadose Zone Soil	KGRDDAMGANPTQAVGITAFLLGFTALSGALYAGSILLYIVTIALLAGSVAAFRKAKPLENAEN*
Ga0137361_105230502	3300012362	Vadose Zone Soil	MGANPTQAVGITAFLLGFTALSGALYAGSILLYIVTIALLAASVAAFRKTKPLENAEN*
Ga0137397_100013619	3300012685	Vadose Zone Soil	MGANRTQAVGITAFLLGFTAFSGAMYAGSVLLYIVAAALLAGSVAAFRKAKPLEYVEN*
Ga0137396_105306832	3300012918	Vadose Zone Soil	MGANSTQAVGITAFLLGFTTLSGALYAGSIPLYIVTIALLAGSVAAFGKAKPLENAEN*
Ga0137396_109657052	3300012918	Vadose Zone Soil	MGREHAMGANPTQAVGITAFLLGFTVLSGAIYGGKILLYIVAAALLAGSVAAFLKAK
Ga0137394_101091002	3300012922	Vadose Zone Soil	MGANRTQAVGITAFLLGFTAFSGAMYAGSVLLYVVAAALLAGSVAAFRKAKPLEYVEN*
Ga0137419_102032552	3300012925	Vadose Zone Soil	MGANPTQALGITAFLLGFTALSGALYAGSILLYIVTIALLAASVAAFRKAKPLENAEN*
Ga0137416_101856812	3300012927	Vadose Zone Soil	MGANPTQAVGITAFLLGFTALSGALYAGSILLYIVTIALLAGSVAAFRKAKPLENAEN*
Ga0137416_108832671	3300012927	Vadose Zone Soil	MGANPTQAVGITAFLLGFTALSGALYAGSILLYIVTIALLAASGAAFRKAKPLENAEN*
Ga0137416_117996542	3300012927	Vadose Zone Soil	MGANPTQAVGITAFLLGFTAFSGAMYAGSVLLYVVAAALLAGSVAAFRKAKPLEHVEN*
Ga0181539_10448003	3300014151	Bog	MGANPTQAVGVTVFLLAFTALAGAIYAGSVLLCLVAAAFLAGSLAIFRKIKPLEQAEN*
Ga0181539_10978291	3300014151	Bog	MGANSTQAIGVTVFLLAFTALAGAIYAGSVLLYLVAAAFLAGSLAIFRKIKPLEQAEN*
Ga0181533_10275156	3300014152	Bog	MGANSTQAIGVTVFLLAFTALAGAIYAGSALLYLVAAAFLAGSLAIFRKIKPLEQAEN*
Ga0182017_1000007653	3300014494	Fen	MGANPTQAVGVTVFLLAFTALAGAIHAGSILLYLVAAAFLAGSLAIFRKIKPLEQAEN*
Ga0137420_10401092	3300015054	Vadose Zone Soil	MGANPTQAVGIAAFLLGFTVLSGAIYGGKILLYIVAVALLAGSVAAFLKAKPLEQAEN*
Ga0137420_13591491	3300015054	Vadose Zone Soil	MGANRTQAVGITAFLLGFTAFSGAMYAGSVLLYVVAAALLAGSVATFRKAKPLEHVEN*
Ga0137409_100017479	3300015245	Vadose Zone Soil	MGANSTQAVGVTAFLLGFTVFSGAMYAGSVLLYVVAAALLAGSVAAFRKAKPLEHAEN*
Ga0187818_100487924	3300017823	Freshwater Sediment	MGANSMQAVGVTIFLLAFTLLAAGIFAGSVLLYILAAAFLAGSIAIFRKIKPLEQAENGG
Ga0187856_1000017134	3300017925	Peatland	MGANPTQAVGVTVYLLAFTALAGAIYAGSVLLYLVAAAFLAGSLAIFRKIKPLEQAEN
Ga0187849_10185315	3300017929	Peatland	MGANPTQAVGVTIFLLAFTALAGAIYAGSFLLYLVAAAFLAGSFAIFRRIKPLEQAEN
Ga0187801_103922002	3300017933	Freshwater Sediment	VGVTIFLLAFTLLAAGIFAGSVLLYILAAAFLAGSIAIFRRIKPLEQAENGV
Ga0187878_10384613	3300018005	Peatland	MGANPTQAVGVTAFLLAFTALAGAIYAGSILLYVVAAAFLAGSVAIFRKVKPLEQAEN
Ga0187769_106215653	3300018086	Tropical Peatland	MGANSMQAVGVTVFLLAFTALAGGIFAGSVLLYIIAAAFLAGSIAIFRKIKPLEQAEN
Ga0187771_106019642	3300018088	Tropical Peatland	MGANPTQAIGVTVFLLAFTALAGAICAGSVLLYLVAAAFLTGSLAIFRKIKPLEQAEN
Ga0187771_116313631	3300018088	Tropical Peatland	MGANSMQAVGVTVFLLAFTALAGGIFAGSVLLYLIAAAFLAGSIAIFRRIKPLEQAEN
Ga0066667_100117743	3300018433	Grasslands Soil	MGANPTQAVGITAFLLGFTALSGALYAGSILLYIVTIALLAASVAAFRKAKPLENAEN
Ga0066669_101802473	3300018482	Grasslands Soil	MGANPTQAVGITAFLLGFTALSGALYAGSMLLYIVTIALLAASVAALRKAKPLENAEN
Ga0182028_14368663	3300019788	Fen	MGANPTQAVGVTVFLLAFTALAGAIHAGSILLYLVAAAFLAGSLAIFRKIKPLEQAEN
Ga0193747_100010031	3300019885	Soil	MGANPSQAVGITAFLLGFTALSGALYAGSILLYIVTIALLAASVAAFRKAKPLENAEN
Ga0179596_104189123	3300021086	Vadose Zone Soil	QAVGITAFLLGFTALSGALYAGSILLYIVTIALLAASVAAFRKAKPLENAEN
Ga0179584_13794592	3300021151	Vadose Zone Soil	MGANSTQAVGVTAFLLGFTVFSGAMYAGSVLLYVVAAALLAGSVAAFRKAKPLEHVEN
Ga0179589_100829162	3300024288	Vadose Zone Soil	MGANRTQAVGITAFLLGFTAFSGAMYAGSVLLYIVAAALLAGSVVAFRKAKPLEHVEN
Ga0208321_10145211	3300025409	Peatland	MGANPTQAVGVTVYLLAFTALAGAIYAGSVLLYLVAAAFLAGSLAIFR
Ga0209234_10024586	3300026295	Grasslands Soil	MGANPTQAVGITAFLLGFTALSGALYAGSILLYIVTIALLAASVAALRKAKPLENAEN
Ga0208044_10263533	3300027625	Peatlands Soil	MGANPTQAVGVTIFLLAFTALAGAIYAGGFLLYLVAVAFLAGSIAIFRKVKPLEQAEN
Ga0209076_10215522	3300027643	Vadose Zone Soil	MGANPSQAVGITAFLLGFTALSGALYAGSILLYIVTIALLAGSVAAFRKVKPLENAEN
Ga0209076_11390373	3300027643	Vadose Zone Soil	PTQAVGITAFLLGFTVLSGAIYGGKILLYIVAVALLAGSVAAFLKAKPLEQAEN
Ga0208990_10304443	3300027663	Forest Soil	MGANRTQAMGITAFLLGFTAFSGAMYAGSVLLYVVAAALLAGSVAAFRKAKPLEHVEN
Ga0209588_10025706	3300027671	Vadose Zone Soil	MGANPTQAVGITAFLLGFTVLSGAIYGGKILLYIVAAALLAGSVAAFLKAKPLEQVEN
Ga0209039_100001517	3300027825	Bog Forest Soil	MGANPTQAVGVTVFLLAFTALAGAIYAGSVLLYLVAAALLAGSIAIFRKIKPLEQAEN
Ga0209039_100072084	3300027825	Bog Forest Soil	MGANPTQAVGVAIFLLAFTALAGAIYAGSFLLYLVAVAFLAGSIAIFRKVKPLEQAEN
Ga0209039_101611352	3300027825	Bog Forest Soil	MGAHPTQAVGVTIFLLAFTALAGAIYAGSLLLYLVAVAFLAGSIAIFRKVKPLEQAEN
Ga0209517_1000800310	3300027854	Peatlands Soil	MGANPTQAVGVTIFLLAFTALAGAIYAGSILLYIVAAALLAGSIAIFRKIKPLEQAEN
Ga0209283_103656192	3300027875	Vadose Zone Soil	MGANPTQAVGVTAFLLGFTVLSGAIYGGKILLYILAAALLAGSVAAFLKAKPLEQVEN
Ga0137415_100038629	3300028536	Vadose Zone Soil	MGANPTQAVGITAFLLGFTALSGALYAGSILLYIVTIALLAGSVAAFRKAKPLENAEN
Ga0316363_100967241	3300030659	Peatlands Soil	ANPTQAVGVTAFLLAFTALAGAIYAGSILLYLVAAAFLAGSIAIFRKIKPLEQAEN
Ga0311301_1000093634	3300032160	Peatlands Soil	MGANPTQAVGVTAFLLAFTALAGAIYAGSILLYLVAAAFLAGSIAIFRKIKPLEQAEN
Ga0326728_1000202819	3300033402	Peat Soil	MGANPTQAVGVTVFLLGFTALAGAIYAGSVLLYLVAAAFLAGSLAIFRKIRPLEQAEN
Ga0326728_100205617	3300033402	Peat Soil	MGANSTQAIGVTVFLLAFTALAGAIYAGSALLYLVAAAFLAGSLAIFRKIKPLEQAEN
Ga0326728_100803146	3300033402	Peat Soil	MGANSTQAIGVTVFLLAFTALAGAIYAGSVLLYLVAAAFLAGSLAIFRKIKPLEQAEN
Ga0326728_110065471	3300033402	Peat Soil	MGANPTQAIGVTVFLLAFTALAGAIYAGSVLLYLVSAAFLAGSLAIFRKIKPLEQAEN
Ga0326727_100812041	3300033405	Peat Soil	MGANSTQAIGVTVFLLAFTALAAAIYAGSVLLYLVAAAFLAGSLAIFRKI
Ga0326727_103727663	3300033405	Peat Soil	GVTVFMLAFTALAGAIYAGSVLLYIVAAAFLAGSIAIFRKVKPLEQAEN
Ga0371489_0271799_28_219	3300033755	Peat Soil	MEGNAMGANSTQAIGVTVFLLAFTALAAAIYAGSVLLYLVAAAFLAGSLAIFRKIKPLEQAEN
Ga0326724_0190860_832_1023	3300034091	Peat Soil	MEGNAMGANSTQAIGVTVFLLAFTALAGAIYAGSVLLYLVAAAFLAGSLAIFRKIKPLEQAEN
Ga0370546_074174_395_562	3300034681	Soil	MGANPTQAVGITAFLLGFTALSGALYAGSILLYIVTIALLAASVAAFRKAKPLENA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093644

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences