NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F093487

Metagenome / Metatranscriptome Family F093487

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F093487
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 68 residues
Representative Sequence MAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVEEVKEDEDN
Number of Associated Samples 74
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 53.33 %
% of genes near scaffold ends (potentially truncated) 32.08 %
% of genes from short scaffolds (< 2000 bps) 82.08 %
Associated GOLD sequencing projects 68
AlphaFold2 3D model prediction Yes
3D model pTM-score0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (73.585 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake
(39.623 % of family members)
Environment Ontology (ENVO) Unclassified
(65.094 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(68.868 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 5.49%    β-sheet: 0.00%    Coil/Unstructured: 94.51%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.19
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF01807zf-CHC2 15.09
PF13362Toprim_3 10.38
PF13481AAA_25 1.89
PF07659DUF1599 1.89
PF03796DnaB_C 1.89
PF00145DNA_methylase 0.94
PF01930Cas_Cas4 0.94
PF04545Sigma70_r4 0.94
PF01844HNH 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG0358DNA primase (bacterial type)Replication, recombination and repair [L] 15.09
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 1.89
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 1.89
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 0.94
COG1468CRISPR/Cas system-associated exonuclease Cas4, RecB familyDefense mechanisms [V] 0.94


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A73.58 %
All OrganismsrootAll Organisms26.42 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003277|JGI25908J49247_10085912Not Available770Open in IMG/M
3300003490|JGI25926J51410_1000579Not Available6573Open in IMG/M
3300003490|JGI25926J51410_1007203All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi2319Open in IMG/M
3300004810|Ga0007757_11257731Not Available528Open in IMG/M
3300005517|Ga0070374_10281963Not Available845Open in IMG/M
3300005527|Ga0068876_10025616All Organisms → Viruses → Predicted Viral3699Open in IMG/M
3300005582|Ga0049080_10124670Not Available870Open in IMG/M
3300005662|Ga0078894_10485764All Organisms → Viruses → Predicted Viral1110Open in IMG/M
3300005943|Ga0073926_10055456Not Available772Open in IMG/M
3300006805|Ga0075464_10487419Not Available754Open in IMG/M
3300006805|Ga0075464_10906470Not Available551Open in IMG/M
3300008107|Ga0114340_1057859All Organisms → Viruses → Predicted Viral1674Open in IMG/M
3300008107|Ga0114340_1087260All Organisms → Viruses → Predicted Viral1275Open in IMG/M
3300008108|Ga0114341_10059387All Organisms → Viruses → Predicted Viral2450Open in IMG/M
3300008114|Ga0114347_1005087All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage7364Open in IMG/M
3300008116|Ga0114350_1159432Not Available615Open in IMG/M
3300008116|Ga0114350_1173190Not Available566Open in IMG/M
3300008120|Ga0114355_1227681Not Available568Open in IMG/M
3300008259|Ga0114841_1094899All Organisms → Viruses → Predicted Viral1312Open in IMG/M
3300008264|Ga0114353_1219752Not Available876Open in IMG/M
3300009056|Ga0102860_1031371All Organisms → Viruses → Predicted Viral1397Open in IMG/M
3300009068|Ga0114973_10210091Not Available1060Open in IMG/M
3300009085|Ga0105103_10624554Not Available614Open in IMG/M
3300009161|Ga0114966_10463546Not Available729Open in IMG/M
3300009180|Ga0114979_10817956Not Available522Open in IMG/M
3300009181|Ga0114969_10026702All Organisms → Viruses → Predicted Viral4021Open in IMG/M
3300009183|Ga0114974_10104510All Organisms → Viruses → Predicted Viral1818Open in IMG/M
3300010160|Ga0114967_10619435Not Available519Open in IMG/M
3300012012|Ga0153799_1008577All Organisms → Viruses → Predicted Viral2341Open in IMG/M
3300012663|Ga0157203_1019313All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi1009Open in IMG/M
3300012715|Ga0157599_1056025Not Available620Open in IMG/M
3300013004|Ga0164293_10136573All Organisms → Viruses → Predicted Viral1838Open in IMG/M
3300013004|Ga0164293_10856192Not Available574Open in IMG/M
3300013005|Ga0164292_10341595Not Available1013Open in IMG/M
3300013372|Ga0177922_10913894All Organisms → Viruses → Predicted Viral1642Open in IMG/M
3300017701|Ga0181364_1053431Not Available631Open in IMG/M
3300017722|Ga0181347_1143318Not Available656Open in IMG/M
3300017723|Ga0181362_1090559Not Available612Open in IMG/M
3300017736|Ga0181365_1134313Not Available590Open in IMG/M
3300017736|Ga0181365_1136381Not Available585Open in IMG/M
3300017736|Ga0181365_1158494Not Available534Open in IMG/M
3300017736|Ga0181365_1167029Not Available517Open in IMG/M
3300017774|Ga0181358_1185925Not Available688Open in IMG/M
3300017774|Ga0181358_1244916Not Available566Open in IMG/M
3300017777|Ga0181357_1153878Not Available845Open in IMG/M
3300017777|Ga0181357_1259643Not Available601Open in IMG/M
3300017777|Ga0181357_1259965Not Available600Open in IMG/M
3300017777|Ga0181357_1322732Not Available519Open in IMG/M
3300017778|Ga0181349_1204680Not Available680Open in IMG/M
3300017780|Ga0181346_1303448Not Available541Open in IMG/M
3300017780|Ga0181346_1335597Not Available504Open in IMG/M
3300017784|Ga0181348_1185984Not Available754Open in IMG/M
3300017784|Ga0181348_1194123Not Available732Open in IMG/M
3300017784|Ga0181348_1270278Not Available580Open in IMG/M
3300017784|Ga0181348_1319661Not Available514Open in IMG/M
3300017785|Ga0181355_1258260Not Available666Open in IMG/M
3300019784|Ga0181359_1000031All Organisms → cellular organisms → Bacteria27521Open in IMG/M
3300019784|Ga0181359_1036001All Organisms → Viruses → Predicted Viral1916Open in IMG/M
3300019784|Ga0181359_1259925Not Available521Open in IMG/M
3300022179|Ga0181353_1073125Not Available873Open in IMG/M
3300022190|Ga0181354_1069689Not Available1166Open in IMG/M
3300022190|Ga0181354_1110045Not Available891Open in IMG/M
3300022190|Ga0181354_1151681Not Available724Open in IMG/M
3300022190|Ga0181354_1177695Not Available649Open in IMG/M
3300022407|Ga0181351_1102368Not Available1104Open in IMG/M
3300022407|Ga0181351_1194153Not Available685Open in IMG/M
3300023184|Ga0214919_10014970Not Available9198Open in IMG/M
3300023184|Ga0214919_10110288All Organisms → Viruses → Predicted Viral2309Open in IMG/M
3300025896|Ga0208916_10103481Not Available1206Open in IMG/M
3300027213|Ga0208555_1077357Not Available505Open in IMG/M
3300027586|Ga0208966_1020632All Organisms → Viruses → Predicted Viral1939Open in IMG/M
3300027601|Ga0255079_1050085Not Available890Open in IMG/M
3300027708|Ga0209188_1188230Not Available751Open in IMG/M
3300027759|Ga0209296_1030162All Organisms → Viruses → Predicted Viral2998Open in IMG/M
3300027782|Ga0209500_10173353Not Available995Open in IMG/M
3300027798|Ga0209353_10078933All Organisms → Viruses → Predicted Viral1495Open in IMG/M
3300027808|Ga0209354_10077344All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi1352Open in IMG/M
3300027808|Ga0209354_10283014Not Available661Open in IMG/M
3300027892|Ga0209550_10693906Not Available587Open in IMG/M
3300027972|Ga0209079_10311559Not Available533Open in IMG/M
3300027974|Ga0209299_1273067Not Available597Open in IMG/M
3300028025|Ga0247723_1001325All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes14699Open in IMG/M
3300031707|Ga0315291_10067514Not Available3955Open in IMG/M
3300031707|Ga0315291_11039077Not Available685Open in IMG/M
3300031758|Ga0315907_10011573Not Available8675Open in IMG/M
3300031758|Ga0315907_10765272Not Available725Open in IMG/M
3300031787|Ga0315900_10037531All Organisms → cellular organisms → Bacteria5282Open in IMG/M
3300031787|Ga0315900_10537346Not Available874Open in IMG/M
3300031857|Ga0315909_10395971Not Available991Open in IMG/M
3300031885|Ga0315285_10818815Not Available581Open in IMG/M
3300031951|Ga0315904_10004509Not Available19837Open in IMG/M
3300031951|Ga0315904_10300292All Organisms → Viruses → Predicted Viral1505Open in IMG/M
3300031963|Ga0315901_10042783All Organisms → Viruses → Predicted Viral4502Open in IMG/M
3300031963|Ga0315901_10260367All Organisms → Viruses → Predicted Viral1461Open in IMG/M
3300031963|Ga0315901_10682895Not Available764Open in IMG/M
3300031999|Ga0315274_10634083Not Available1172Open in IMG/M
3300032053|Ga0315284_11435815Not Available737Open in IMG/M
3300032092|Ga0315905_11086763Not Available664Open in IMG/M
3300032092|Ga0315905_11364058Not Available566Open in IMG/M
3300032177|Ga0315276_12383709Not Available532Open in IMG/M
3300033996|Ga0334979_0273963Not Available967Open in IMG/M
3300034012|Ga0334986_0069078All Organisms → Viruses → Predicted Viral2185Open in IMG/M
3300034061|Ga0334987_0463968Not Available782Open in IMG/M
3300034101|Ga0335027_0792401Not Available550Open in IMG/M
3300034106|Ga0335036_0247090Not Available1210Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake39.62%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater11.32%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater10.38%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake9.43%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton8.49%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment6.60%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous2.83%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.89%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic1.89%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.89%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.89%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.94%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.94%
SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sand0.94%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment0.94%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003277Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300003490Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SNEnvironmentalOpen in IMG/M
3300004810Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005517Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)EnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005943Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_4-Nov-14EnvironmentalOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008108Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NAEnvironmentalOpen in IMG/M
3300008114Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NAEnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300008120Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NAEnvironmentalOpen in IMG/M
3300008259Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NAEnvironmentalOpen in IMG/M
3300008264Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-53-LTREnvironmentalOpen in IMG/M
3300009056Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3EnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009085Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009180Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaGEnvironmentalOpen in IMG/M
3300009181Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaGEnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300010160Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaGEnvironmentalOpen in IMG/M
3300012012Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300012663Freshwater microbial communities from Indian River, Ontario, Canada - S50EnvironmentalOpen in IMG/M
3300012715Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES122 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013005Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaGEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017701Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017722Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017723Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017736Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.NEnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017780Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017784Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300023184Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503EnvironmentalOpen in IMG/M
3300025896Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027213Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3 (SPAdes)EnvironmentalOpen in IMG/M
3300027586Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027601Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepB_8hEnvironmentalOpen in IMG/M
3300027708Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027759Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027782Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027798Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027808Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027892Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027972Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027974Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300028025Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FCEnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031885Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300031999Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20EnvironmentalOpen in IMG/M
3300032053Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16EnvironmentalOpen in IMG/M
3300032092Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121EnvironmentalOpen in IMG/M
3300032177Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0EnvironmentalOpen in IMG/M
3300033996Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004EnvironmentalOpen in IMG/M
3300034012Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027EnvironmentalOpen in IMG/M
3300034061Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028EnvironmentalOpen in IMG/M
3300034101Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25908J49247_1008591233300003277Freshwater LakeMVKGEAVMAVAIKPLRHRRRTAQRGKSLSQSQRWGKVVTIMPVPGGEITTTEILVPEVVPVEEENKDEAESN*
JGI25926J51410_100057993300003490Freshwater LakeMAVAIKPLRHRRRTAQRGKSLSQSQRWGKVVTIMPVPGGEITTTEILVPVVEEVVEEVEDDLPELS*
JGI25926J51410_100720333300003490Freshwater LakeMAVAIKPLRHRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVEEETKDEN*
Ga0007757_1125773113300004810Freshwater LakeMAVAIKPLRHRRRTAQRGKSLSQSQRWGKVVTIMPVPGGEITTTEILVPVVEEVVE
Ga0070374_1028196323300005517Freshwater LakeMAVAIKPLRHRRRTAQRGKSLSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVEEPEDDLPELS*
Ga0068876_1002561623300005527Freshwater LakeMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVEEVKEDEDN*
Ga0049080_1012467013300005582Freshwater LenticMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVA
Ga0078894_1048576443300005662Freshwater LakeMAVAIKPIRRRRRTAQRGKPMSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVEEVKEEAEVEE*
Ga0073926_1005545633300005943SandVGKGEAVVAIAIKPLRHRRRTAQRGKSLSQSQRWGKVVTIMPVPGGEITTTEILVPEVVPVEEVEDDLPELS*
Ga0075464_1048741913300006805AqueousSLGHFRPSTMVKGEAVMAVAIKPLRRRRRTAQRGKPMKQSQRWGKVVTTMPVPEGEITTAEILVQEVVPTEEDEDEA*
Ga0075464_1090647013300006805AqueousEIMAITIRPLRQRRRTAQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVVEEVKEDDD*
Ga0114340_105785933300008107Freshwater, PlanktonMVKGETVMAVAIRTLRRRRRTAQRGKPMSQSQRWGKVVTTMPVPEGIITTSEILQPVQEEVVEVSTTEEDEDNEDS*
Ga0114340_108726033300008107Freshwater, PlanktonMVKGEAVMAVAIKPLRRRRRTTQRGKPMNQSQRWGKVVTTMPVPEGNITTSEILVPEVEEVVEEVEETKAEVEE*
Ga0114341_1005938743300008108Freshwater, PlanktonMVKGEAVMAVAIRTLRRRRRTAQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPVVEEVVETTEEETKDEA*
Ga0114347_100508753300008114Freshwater, PlanktonMVKGEAVMAVAIKPLRRRRRTAQRGKPMSQSQRWGKVVITMPVPEGNITTSEILVPVVEEVVEVSTTEEAEDDLPELS*
Ga0114350_115943213300008116Freshwater, PlanktonMVKGEAVMAVAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPEGNITTSEILVPVVEEVVETTEEETKDEAETN*
Ga0114350_117319013300008116Freshwater, PlanktonRFNRSGLGNPRLNSMVKGEAVMAVAIKPLRRRRRTTQRGKPMNQSQRWGKVVTTMPVPEGNITTSEILVPEVEEVVEEVEETKAEV*
Ga0114355_122768123300008120Freshwater, PlanktonMAVAIRTLRRRRRTAQRGKPMSQSQRWGKVVTTMPVPEGIITTSEILQPVQEEVVEVSTTEEDEDNEDS*
Ga0114841_109489943300008259Freshwater, PlanktonAVAIKPLRRRRRTAQRGKPMSQSQRWGKVVITMPVPEGNITTSEILVPVVEEVVEVSTTEEAEDDLPELS*
Ga0114353_121975213300008264Freshwater, PlanktonMVEGEAVMAIAIKPLRRRRRTAQRGKPMSQSQRWGKVETIMPVPEGQITTSEILIPDAVE
Ga0102860_103137123300009056EstuarineMVKGETVMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVVEEVKEDDV*
Ga0114973_1021009123300009068Freshwater LakeMVKGEAVMAVAIKPLRHRRRTAQRGKSLSQAQRWGKVVTIMPVPGGEITTTEILVPEVVPVEETTEEEVNE*
Ga0105103_1062455423300009085Freshwater SedimentMAVAIKPLRRRRRTTQRGKPMSQSQRWGKVVTTMPVPGGEITTSEILVPEVVPEVVPVEEVKEEDEDN*
Ga0114966_1046354623300009161Freshwater LakeMVKGETVMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVAPIEETTEEEANEATN*
Ga0114979_1081795623300009180Freshwater LakeMVKGEAVMAVAIKPLRRRRHTAQRGKPMSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVEETTEEEVNE*
Ga0114969_1002670243300009181Freshwater LakeMVKGETVMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVAPIEEPEDDD*
Ga0114974_1010451033300009183Freshwater LakeMAVAIKPLRHRRRTAQRGKSLSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVEEVKEDEDN*
Ga0114967_1061943513300010160Freshwater LakePLKNRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVEEVKEEAEVEE*
Ga0153799_100857753300012012FreshwaterMVKGETVMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVVEEVKEDDD*
Ga0157203_101931333300012663FreshwaterAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVVEEAEDDLPELS*
Ga0157599_105602523300012715FreshwaterMAVAIKPLRRRRRTTQRGKPMNQSQRWGKVVTTMPVPGGEITTSEILKPVEEVVEVSTTEEDEDDLPKL*
Ga0164293_1013657343300013004FreshwaterRRTAQRGKPITQSQRWGKVVTTMAVPNGAITTSEILVPEVVPEVVPVVEEVAEEVDAEEDDLQ*
Ga0164293_1085619213300013004FreshwaterMVKGEAVMAVAIKPLRRRRRTAQRGKPMSQSQRWGKVVTTMPVPGGEITTSEILVPVVEEVVEVSTTEEEAEDD
Ga0164292_1034159533300013005FreshwaterMAVAIKPLRRRRRTTQRGKPMNQSQRWGKVVTTMPVPGGEITTSEILKPVVEEVVEVSTTEEAEETDDN*
Ga0177922_1091389433300013372FreshwaterVGKGEAVMAVAIKPLRHRRRTAQRGKSLSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVEEVKEEAEVEE*
Ga0181364_105343113300017701Freshwater LakeGEAVMAVAIKPLRQRRRTEQRGKSLSQSQRWGKVVTTMPVPGGEITTTEILVPEVAPIEEPEDDD
Ga0181347_114331813300017722Freshwater LakeRRRTAQRGKSLSQSQRWGKVVTIMPVPGGEITTTEILVPEVVPVEEENKDEAESN
Ga0181362_109055913300017723Freshwater LakeIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVEEVKEDEDN
Ga0181365_113431313300017736Freshwater LakeIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVAPIEEPEDDD
Ga0181365_113638113300017736Freshwater LakePHKMQWLATATLKRSSFGKPKINQKGKGETVMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVEETTEEEVKDEA
Ga0181365_115849413300017736Freshwater LakePSTMVKGEAVMAVAIKPLRHRRRTVQRGKPMNQSQRWGKVVTIMPVPGGEITTTEILVPVVEEVIEEEVNED
Ga0181365_116702933300017736Freshwater LakeMAFAIKPLRHRRRTAQRGKSLSQSQRWGKVVTTMPVPEGDITTSEILVPEVEEVVEDSTTKEVEDDL
Ga0181358_118592533300017774Freshwater LakeSLGHSGPSTMVKGEAVMAVAIKPLRHRRRTAQRGKSLSQSQRWGKVVTIMPVPGGEITTTEILVPEVVPVEEENKDEAESN
Ga0181358_124491613300017774Freshwater LakeMAVAIKPLRHRRRTAQRGKSLSQSQRWGKVVTIMPVPGGEITTTEILVPEVVPVEEEVVEEKDDN
Ga0181357_115387823300017777Freshwater LakeMVKGEAVMAVAIKPLRHRRRTVQRGKPMNQSQRWGKVVTIMPVPGGEITTTEILVPVVEEVIEEEVNED
Ga0181357_125964323300017777Freshwater LakeMDKGEAVMAVAIKPLRHRRRTAQRGKSLSQSQRWGKVVTIMPVPGGEITTTEILVPVVEEVVEEPEDDD
Ga0181357_125996523300017777Freshwater LakeMAVAIKPLRRRRRTAQRGKPMKQSQRWGKVVTTMPVPEGEITTAEILVQEVVPTEEEDEDEA
Ga0181357_132273223300017777Freshwater LakeMAATIRPLGQRRRTAQRGKSMSQSQRWGKVVTIMPVPNGEITTTEILTPEVVEETELEIEDEK
Ga0181349_120468033300017778Freshwater LakeVAIKPLRHRRRTAQRGKSLSQSQRWGKVVTIMPVPGGEITTTEILVPEVVPVEEENKDEAESN
Ga0181346_130344833300017780Freshwater LakeIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVAPIEETTEEEANEATN
Ga0181346_133559713300017780Freshwater LakePSTMVKGETVMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVEETTEEEVKDEA
Ga0181348_118598423300017784Freshwater LakeMAVAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPEGDITTSEILVPEVEEVVEDSTTKEVEDDLPELP
Ga0181348_119412333300017784Freshwater LakeRFNRSGLGNPRLSTMVKGEAVMAVAIKPLRHRRRTAQRGKSLSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVEEVKEDEDN
Ga0181348_127027823300017784Freshwater LakeMAVAIKPIRRRRRTAQRGKPMKQSQRWGKVVTTMPVPEGEITTAEILETEVILNEEDEDDDQDRPT
Ga0181348_131966113300017784Freshwater LakeGETVMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVEETTEEEVKDEA
Ga0181355_125826013300017785Freshwater LakeRHRRRTAQRGKSLSQSQRWGKVVTIMPVPGGEITTTEILVPEVVPVEEENKDEAESN
Ga0181359_1000031363300019784Freshwater LakeMDKGEAVMAVAIKPLRHRRRTAQRGKSLSQSQRWGKVVTIMPVPGGEITTTEILVPVVEEVVEEVEDDLPELS
Ga0181359_103600133300019784Freshwater LakeMAVAIKPLRHRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVEEETKDEN
Ga0181359_125992513300019784Freshwater LakeLGHLRPSTMVKGETVMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVEETTEEEVKDEA
Ga0181353_107312523300022179Freshwater LakeMAVAIKPIRRRRRTAQRGKPMSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVEEVKEEAEVEE
Ga0181354_106968933300022190Freshwater LakeMAVAIKPLRHRRRTAQRGKSLSQSQRWGKVVTIMPVPGGEITTTEILVPEVVPVEEENKDEAESN
Ga0181354_111004513300022190Freshwater LakeMAATIRPLGQRRRTAQRGKPMSQSQRWGKVVTIMPVPNGEITTSEILTPEVVEETELEIEDEK
Ga0181354_115168123300022190Freshwater LakeMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVAPIEEPEDD
Ga0181354_117769523300022190Freshwater LakeMVKGEAVMAVAIKPLRHRRRTVQRGKPMNQSQRWGKVVTIMPVPGGEITTTEILVPVVEEVIEEEVNE
Ga0181351_110236833300022407Freshwater LakeMVKGEAVMAVAIKPLRHRRRTAQRGKSLSQSQRWGKVVTIMPVPGGEITTTEILVPEVVPVEEENKDEAESN
Ga0181351_119415323300022407Freshwater LakeMAVAIKPLRHRRRTVQRGKPMNQSQRWGKVVTIMPVPGGEITTTEILVPVVEEVIEEEVNED
Ga0214919_10014970223300023184FreshwaterMAVAIKPLRRRRRTAQRGKPMKQSQRWGKVVTTMPVPEGEITTAEILVQEVVPTEEDEDDDQDRST
Ga0214919_1011028853300023184FreshwaterMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPVEPVVEEVEDDLPELS
Ga0208916_1010348133300025896AqueousSLGHFRPSTMVKGEAVMAVAIKPLRRRRRTAQRGKPMKQSQRWGKVVTTMPVPEGEITTAEILVQEVVPTEEDEDEA
Ga0208555_107735723300027213EstuarineMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVVEEVKEDDV
Ga0208966_102063223300027586Freshwater LenticMVKGETVMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVAPIEEPEDDD
Ga0255079_105008523300027601FreshwaterMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVEEVEDDLPELS
Ga0209188_118823023300027708Freshwater LakeMAATIRPLSNRRRTAQRGKPMSQSQRWGKVVTTMTPVPEGDITTSEILETEVEVVEEDETQA
Ga0209296_103016273300027759Freshwater LakeMAVAIKPLRHRRRTAQRGKSLSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVEEVKEDEDN
Ga0209500_1017335323300027782Freshwater LakeMAATIRPLSNRRRTAQRGKPMSQSQRWGKVVTTMTPVPEGDITTSEILKTEVEVVEEDETQA
Ga0209353_1007893323300027798Freshwater LakeMAVAIKPLRHRRRTAQRGKSLSQSQRWGKVVTIMPVPGGEITTTEILVPEVVPIEEPEDD
Ga0209354_1007734413300027808Freshwater LakeGKGEAVMAVAIKPLRHRRRTAQRGKSLSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPIEEPEDDD
Ga0209354_1028301413300027808Freshwater LakeLRHRRRTAQRGKSLSQSQRWGKVVTIMPVPGGEITTTEILVPEVVPVEEENKDEAESN
Ga0209550_1069390633300027892Freshwater LakeFNRTSLGHLRPSTMVKGEAVMAVAIKPLRHRRRTAQRGKSLSQSQRWGKVVTIMPVPGGEITTTEILVPEVVPVEEENKDEAESN
Ga0209079_1031155923300027972Freshwater SedimentMAVAIKPLRRRRRTTQRGKPMSQSQRWGKVVTTMPVPGGEITTSEILVPEVVPEVVPVEEVKEEDEDN
Ga0209299_127306723300027974Freshwater LakeMAVAIKPLRRRRHTAQRGKPMSQSQRWGKVVTTMAVPEGDITTSEILETESVVEEAIEEELSAEEDLDQA
Ga0247723_1001325263300028025Deep Subsurface SedimentMAVAIKPLRRRRRTAQRGKPMNQSQRWGKVVTTMPVPEGNITTSEILVPVVEEVVEDSTTEEVEDEA
Ga0315291_1006751413300031707SedimentMAATIRPLGQRRRTAQRGKPMSQSQRWGKVVTMMPVPEGEITTSEILQTEVELAEELLVTDDETLVKV
Ga0315291_1103907723300031707SedimentMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVVTMPVPGGEITTTEILVPEVAPIEEPEDD
Ga0315907_10011573153300031758FreshwaterMAVAIKPLRRRRRTAQRGKPMSQSQRWGKVVITMPVPEGNITTSEILVPVVEEVVEVSTTEEAEDDLPELS
Ga0315907_1076527233300031758FreshwaterMAVAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPEGNITTSEILVPVVEEVVETTEEETKDEAETN
Ga0315900_10037531143300031787FreshwaterMAVAIRTLRRRRRTAQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPVVEEVVETTEEETKDEA
Ga0315900_1053734633300031787FreshwaterMVKGETVMAVAIRTLRRRRRTAQRGKPMSQSQRWGKVVTTMPVPEGIITTSEILQPVQEEVVEVSTTEEDEDNEDS
Ga0315909_1039597123300031857FreshwaterMAVAIRTLRRRRRTAQRGKPMSQSQRWGKVVTTMPVPEGIITTSEILQPVQEEVVEVSTTEEDEDDETLVGEYIRATQLQ
Ga0315285_1081353113300031885SedimentMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVVTMPVPGGEITTTEILV
Ga0315285_1081881533300031885SedimentGETVMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVVTMPVPGGEITTTEILVPEVAPIEEPEDDD
Ga0315904_1000450923300031951FreshwaterMVKGEAVMAVAIKPLRRRRRTAQRGKPMSQSQRWGKVVITMPVPEGNITTSEILVPVVEEVVEVSTTEEAEDDLPELS
Ga0315904_1030029233300031951FreshwaterMAVAIKPLRRRRRTTQRGKPMNQSQRWGKVVTTMPVPEGNITTSEILVPEVEEVVEEVEETKAEVEE
Ga0315901_1004278393300031963FreshwaterMVKGEAVMAVAIRTLRRRRRTAQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPVVEEVVETTEEETKDEA
Ga0315901_1026036743300031963FreshwaterMAVAIRTLRRRRRTAQRGKPMSQSQRWGKVVTTMPVPEGIITTSEILQPVQEEVVEVSTTEEDEDNEDS
Ga0315901_1068289533300031963FreshwaterMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPEVAPIEEITEEEANEATN
Ga0315274_1063408343300031999SedimentMAVAIKPLSHRRRTAQRGKSLSQSQRWGKVVTIMPVPGGEITTTEILVPEVVPVEEVKEDEDN
Ga0315284_1143581533300032053SedimentMVKGETVMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVTTMPVPGGEITTTEILVPVVAPIEETTEEEANEATN
Ga0315905_1108676323300032092FreshwaterMVKGEAVMAVAIKPLRHRRRTAQRGKSLSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPIEEPEDDD
Ga0315905_1136405813300032092FreshwaterVAIKPLRHRRRTAQRGKSLSQSQRWGKVVTTMPVPGGEITTTEILVPEVVPVEEVKEEAEVEE
Ga0315276_1238370913300032177SedimentMAIAIKPLRRRRRTTQRGKSMSQSQRWGKVVVTMPVPGGEITTTEILVPVVAPIEETTEEEANEATN
Ga0334979_0273963_135_3893300033996FreshwaterLGNPRLDAVVKGEAVMAVAIKPLRRRRRTTQRGKPMNQSQRWGKVVTTMPVPGGEITTSEILKPVVEEVVEVSTTEEAEETDDN
Ga0334986_0069078_1095_13313300034012FreshwaterMVKGETIMAVAIKPLRRRRRTAQRGKPMSQSQRWGKVVTTMPVPEGVITTTEILVPVVEEVVEVSTTEEDEDDLPELS
Ga0334987_0463968_348_5783300034061FreshwaterMVKGEAVMAVAIKSLRRRRRTAQRGKSLSQSQRWGKVVTTMPVPEGNITTSEILVPVVEEVVETTEEETKDEAETN
Ga0335027_0792401_75_2993300034101FreshwaterMVKREAVMAVAIKPLRRRRRTAQRGKPMSQSQRWGKVVTTMPVPGGEITTSEILVPVVEEVVETSTTEEDKDDE
Ga0335036_0247090_698_9283300034106FreshwaterMVKGEAVMAVAIKPLRRRRRTTQRGKPMSQSQRWGKVVTTMPVPEGNITTSEILVPVVEEVVEVVEEAEDDLPELS


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