Metagenome / Metatranscriptome Family F093478

Overview

Basic Information

• Family ID: F093478
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 106
• Average Sequence Length: 72 residues
• Representative Sequence: LSSSTSLSPRVHAQIASTVSFALGLPATRVQTLSVKEMFVLCQQHGFEVDITVEKPASLNDDEVGFSAELDIAA
• Number of Associated Samples: 58
• Number of Associated Scaffolds: 106

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 50.94 %
• % of genes near scaffold ends (potentially truncated): 34.91 %
• % of genes from short scaffolds (< 2000 bps): 93.40 %
• Associated GOLD sequencing projects: 54
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (60.377 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (29.245 % of family members)
• Environment Ontology (ENVO): Unclassified (38.679 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (50.943 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 29.41%
  β-sheet: 15.69%
  Coil/Unstructured: 54.90%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF07750	GcrA	8.49
PF13223	DUF4031	2.83
PF02518	HATPase_c	2.83
PF08281	Sigma70_r4_2	1.89
PF13581	HATPase_c_2	1.89
PF07311	Dodecin	1.89
PF04237	YjbR	0.94
PF02308	MgtC	0.94
PF02146	SIR2	0.94
PF13340	DUF4096	0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG5352	Uncharacterized conserved protein	Function unknown [S]	8.49
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	1.89
COG0846	NAD-dependent protein deacetylase, SIR2 family	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG1285	Magnesium uptake protein YhiD/SapB, involved in acid resistance	Inorganic ion transport and metabolism [P]	0.94
COG2162	Arylamine N-acetyltransferase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.94
COG2315	Predicted DNA-binding protein with ‘double-wing’ structural motif, MmcQ/YjbR family	Transcription [K]	0.94
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.94
COG3174	Membrane component of predicted Mg2+ transport system, contains DUF4010 domain	Inorganic ion transport and metabolism [P]	0.94
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.94
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.94

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	39.62 %
Unclassified	root	N/A	60.38 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	36.79 %
Unclassified	root	N/A	60.38 %
Viruses	superkingdom	All Organisms → Viruses	2.83 %

Level 3

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.94 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.83 %
Unclassified	root	N/A	60.38 %

Level 4

Name	Rank	Taxonomy	Distribution
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.36 %
Unclassified	root	N/A	60.38 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.47 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.83 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.94 %
Unclassified	root	N/A	60.38 %

Level 6

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.94 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.94 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.83 %
Unclassified	root	N/A	60.38 %

Level 7

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %
Haloferacales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales	0.94 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	14.15 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.83 %
Unclassified	root	N/A	60.38 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	2.83 %

Level 8

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Haloferacaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae	0.94 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	8.49 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	3.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.83 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	2.83 %
Unclassified	root	N/A	60.38 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	0.94 %

Level 9

Name	Rank	Taxonomy	Distribution
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.94 %
Haloplanus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Haloplanus	0.94 %
Methylobacterium aquaticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium aquaticum	0.94 %
Methylobacterium trifolii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium trifolii	0.94 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.94 %
Myxococcales bacterium 68-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.83 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	2.83 %
Unclassified	root	N/A	60.38 %

Level 10

Name	Rank	Taxonomy	Distribution
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.94 %
Haloplanus natans	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Haloplanus → Haloplanus natans	0.94 %
Methylobacterium aquaticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium aquaticum	0.94 %
Methylobacterium trifolii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium trifolii	0.94 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.94 %
Myxococcales bacterium 68-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.83 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	2.83 %
Unclassified	root	N/A	60.38 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300002568|C688J35102_118166963	Not Available	535
3300002568|C688J35102_118245088	Not Available	542
3300002568|C688J35102_120611228	All Organisms → cellular organisms → Bacteria	1241
3300002568|C688J35102_120670288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1326
3300004081|Ga0063454_100078052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1474
3300004081|Ga0063454_100126397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1293
3300004081|Ga0063454_100420733	All Organisms → cellular organisms → Bacteria → Proteobacteria	903
3300004153|Ga0063455_100228355	Not Available	952
3300004153|Ga0063455_100613417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	711
3300004153|Ga0063455_100989546	Not Available	607

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	50.94%
Host-Associated	Host-Associated	49.06%

Class

Habitat	Taxonomy	Distribution
Human	Host-Associated → Human	0.94%
Plants	Host-Associated → Plants	48.11%
Terrestrial	Environmental → Terrestrial	50.94%

Category

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Human → Digestive System	0.94%
Phylloplane	Host-Associated → Plants → Phylloplane	0.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	25.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.75%
Roots	Host-Associated → Plants → Roots	0.94%
Soil	Environmental → Terrestrial → Soil	50.94%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.09%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.94%
Loam	Environmental → Terrestrial → Soil → Loam	10.38%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%
Sand	Environmental → Terrestrial → Soil → Sand	0.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.55%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	9.43%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.94%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.94%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.94%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	9.43%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	9.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.94%

Habitat

Habitat	Taxonomy	Distribution
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.94%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	8.49%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	4.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.94%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	29.25%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	9.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.83%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1181669632	3300002568	Soil	VPSTSITPRVLAQIASTVSFALGLPTARVQTLSVQEMFVLCQQHGFEVDIAAEKPASLNDDEVIFVAELDMAA*
C688J35102_1182450881	3300002568	Soil	LSTSTSVSPRVHAQIASTISFALALPAARVQTLSVREMFVLCQQHGFEVDITVEKPAVFQGDEVGFVAELDMAA*
C688J35102_1206112282	3300002568	Soil	SSTLISTRVHAQIAATVSSALGLPAARVQTLSVKEMLVLCQQHGFEVDITVEKPANFRTDQVGLSAELDMAA*
C688J35102_1206702881	3300002568	Soil	MIGSPTITLNPPDCREDGLSSTSIDMRVRSQIASTVSFALGVPATRVQTLTVREMFVLCQQHGFEVDITVEKPADLQDDEVGFTAELDMAA*
Ga0063454_1000780523	3300004081	Soil	LSSTTSISTRVHAQIASTVSFALGLPATEVQALSVQEMFVLCQQNGFEVGITAGKPADLNDDEVGFVAELDMAA*
Ga0063454_1001263972	3300004081	Soil	MRVRSQIASTVSFALGVPATRVQTLTVREMFVLCQQHGFEVDITVEKPADLQDDEVGFTAELDMAA*
Ga0063454_1004207331	3300004081	Soil	VSPRTSIDTRVRSQIASTVSFALGLPAPRVQTLTLQEIFVLCQQHGFEVDITVETPATLGSDEVGFAAELDMAA*
Ga0063455_1002283552	3300004153	Soil	HAQIASTVSLVLGLPATRVQVLSVKEMFVLCQQHGFEVDITVEAPASLNDPASLNDDEVGLSAELDIAA*
Ga0063455_1006134172	3300004153	Soil	VSPRTSIDTRVRSQIASTVSFALGLPAPRIQTLTLQEIFVLCQQHGFEVDITVETPANYDGDEVGFTAELDMAA*
Ga0063455_1009895462	3300004153	Soil	VPSTSITPRVHAQIASTVSFALGLPTARVQTLSVQEMFVLCQQHGFEVDIAAEKPASLNDDEVILVAELDMAA*
Ga0062595_1015903632	3300004479	Soil	MSSLDTRVRSQIASTVSVAIGVPAARVRTLTLQEIFVLCQQHGFEVNITLEEPESFEADEVGFTAELDMAA*
Ga0058860_120936062	3300004801	Host-Associated	VSPRTSIDTRVRSQIASTVSFALGLPAPRIQTLTLQEIFVLCQQHGFEVDITVEAPANYDGYDAGFTAELDMAA*
Ga0068868_1012358681	3300005338	Miscanthus Rhizosphere	LSSSASLSPRVHAQIASTVSLVLGLPATRVQTLSVREMFVLCQQHGFEVDITVERPASLNDDEVGFSAELDIAA*
Ga0070671_1011024042	3300005355	Switchgrass Rhizosphere	LSTSTSVSPRVHAQIASTISFALALPAARVQTLSVREMFVLCQQHGFEVDITVEEPAVFQGDEVGFVAELDMAA*
Ga0070678_1006967552	3300005456	Miscanthus Rhizosphere	VSPRTSIDTRVRSQIASTVSFALGLPAPRVQTLTLQEIFVLCQQHGFEVDITVEAPANYDGYDAGFTAELDMAA*
Ga0070702_1008031462	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	LPSPSLSPRVHAQIASTISFALGLPATRVQTLSVKEMFVLCQQHGFEVDITVERPASLNDDEVGLSAKLDIAA*
Ga0068852_1025337631	3300005616	Corn Rhizosphere	LSSSPSLSPRVHTQIASTVSLVLGLPATRVQTLSVREMFVLCQQHGFEVDITVERPASLNDDEVGLSAELD
Ga0068859_1022273552	3300005617	Switchgrass Rhizosphere	LPTTAIDTRVRTQIASTVLLALGLPPTRVQSLSVQEMFVLCQEFGFEVDITLGEPPNWND
Ga0068866_112479241	3300005718	Miscanthus Rhizosphere	LSSPSLSPRVHAQIASTVSLVLGLPAKRVQVLSVREMFVLCQQHGFEVDITVERPASLNDDEVG
Ga0068860_1022336063	3300005843	Switchgrass Rhizosphere	STSLSPRVHAQIASTVSFALGVPATRVQTLSVKEMFVLCQQHGFAVDITVERPASLNDDEVGFSAELDMAA*
Ga0079220_104109371	3300006806	Agricultural Soil	LCATALDTRVSAQIASTVSLALGLPPTRVQCLTVQEIFVLCQEFGFEVNITVGEPANGNNEMGFSVELDSAA*
Ga0068865_1013880512	3300006881	Miscanthus Rhizosphere	SPRVHAQIASTISFALALPAARVQTLSVREMFVLCQQHGFEVDITVEKPAVFQGDEVGFVAELDMAA*
Ga0105679_105028813	3300007790	Soil	TVSFALGISATRVQTLSVQEMFVLCQQHGFEVDITVEKPASLQDDKIGFVTELNVAA*
Ga0105245_114256071	3300009098	Miscanthus Rhizosphere	VASTSISTRLHAQIAATVSVALSLPVTRVQTLSVQEMFVLCQQYGFEVDITVERPANLNEGGLVAELDMAA*
Ga0105245_125615552	3300009098	Miscanthus Rhizosphere	VRAQIASTVSLALGLPPTRVQSLSVQEMFVLCQQFGFEVDITVGEPANWNNEMGFSVELDLTA*
Ga0105245_126769251	3300009098	Miscanthus Rhizosphere	MDMRLSSTAIDTRDTRVRAQIASTVSVALGLPPTRMQSLSVQEMFVLCQEFGFEVDITVGEPANWNEGEIGFSAELNLAA*
Ga0105245_130563501	3300009098	Miscanthus Rhizosphere	LSSPSLSPRVHAQIASTISFALALPATRVQTLSVKEMFVLCQQHGFAVDITVERPASLNDDEVGFSAELHITA*
Ga0105247_115791911	3300009101	Switchgrass Rhizosphere	TSLSPRVHAQIASTVSLVLGLPATRVQTLSVREMFVLCQQHGFEVDITVERPASLNDDEVGLSAELDIAA*
Ga0105247_116604812	3300009101	Switchgrass Rhizosphere	AQIASTISFALALPAARVQTLSVREMFVLCQQHGFEVDITVEKPAVFQGDEVGFVAELDMAA*
Ga0105243_127381241	3300009148	Miscanthus Rhizosphere	LSTSTSVSPRVHAQIASTISFALALPAARVQTLSVREMFVLCQKHGFEVDITVEKPAVFQGDEVGFVAELDMAA*
Ga0126307_100465371	3300009789	Serpentine Soil	LGSTTAISTRVRAQIASTVSFALRVPATRVQTLSLQEMFVLCQQHGFEVDITVERPANLQDGEIGFVTELNVAAGSSATPW*
Ga0126307_100940613	3300009789	Serpentine Soil	MGRVAARPFIDTRVRSQIASTISFALGVPATRLQTLIVQEMLVLCPQHGFEVDLTVKQPASIQDGEIAFVAELHMAA*
Ga0126307_101167093	3300009789	Serpentine Soil	LSTTAIYTRVRAQIASTISLALGIPTTRVQNLSVQEMFVLCQQQGFEVDITVGEPANWNEGEIGFSAELDLAA*
Ga0126307_102358632	3300009789	Serpentine Soil	MCGTSYRTQTTLQTEGAADVFSTTSISTRVHAQIVSTVSLALGLPTKRVQTLSVQEMFVLCQQHGFEVDITVETPANLNEGEVGYTAELDMAA*
Ga0126307_103763432	3300009789	Serpentine Soil	STVSFALRVPATRVQTLSLQEMFVLCQQHGFKVDITVERPANLQDDEIGFVAELHTAA*
Ga0126307_104078441	3300009789	Serpentine Soil	MGRVAARTFIDTRVRTQIASTVSFALGVPAIRVQTLSLQEMFVLCQQHGFEVDITVEQPASLQDGEIGFVTELNVAA*
Ga0126307_105301792	3300009789	Serpentine Soil	ALGLPATEVQALSVQEMFVLCQQSGFEVGITAGKPADLNDDEVGFVAELDMAA*
Ga0126307_114886381	3300009789	Serpentine Soil	SSTSLSPRVHAQIASTISFALGLPATRVQTLSFQEMFVLCQQHGFEVDIAAEKPASLNDDDVIFVAELDMAA*
Ga0126313_114234802	3300009840	Serpentine Soil	ISFALGLPATRVQTLSFQEMFVLCQQHGFELDITVERPASLNDDEVGFSAELDIAA*
Ga0126305_109547192	3300010036	Serpentine Soil	VFSTTSISTRLHAQIASTVSLALGLPTKRVQTLSVQGMFVLCQQHGFEVDITVETPANLNEGEVGYTAELDMAA*
Ga0126305_111096971	3300010036	Serpentine Soil	LPSTSIDTRVRSQIAATVSFALGISATRVQTLSVQEMFVLCQQHGFEVDITVERPANLQDDEIGFVAELH
Ga0126305_111153161	3300010036	Serpentine Soil	MDINVPLVSISTRVHAQIASTVSAALGLPAARVQTLSVKEMFVLCQQHGFEVDITVEKPANLHQGGVGLTAELDMAA*
Ga0126305_112312771	3300010036	Serpentine Soil	LFGLDFLPDRLLGLPTARVQTLSVQEMFVLCQQHGFEVDIAAEKPASLNDDDNVIFVAELDMAA*
Ga0126304_101040043	3300010037	Serpentine Soil	VFSTTSISTRLHAQIASTVSLALGLPTKRVQTLSVQEMFVLCQQHGFEVDITVETPANLNEGEVGYTAELDMAA*
Ga0126309_101098312	3300010039	Serpentine Soil	MIGSPTITLNPHDRREDGLSSTSIDTRVRSQIASTVSFALGVPATRVQTLTVREMFVLCQQLGFEVDITVEKPADLQDDEVGFTAELDMAA*
Ga0126309_106309631	3300010039	Serpentine Soil	MGRVAARTFIDTRVRSQIASTISFALGVPATRLQTLILQEMLVLCQQHGFEVDLTVKQPASLQDDEIGFVAELHVAA*
Ga0126309_106656041	3300010039	Serpentine Soil	LFSTTSIDTRVRSQIASTIAVALSLPATRVQTLSVQEMFVLCQQHGFEVDITVEQPAAFQPDEVGFVAELDMAA*
Ga0126309_112754921	3300010039	Serpentine Soil	SSTSIDTHVRSQIASTIAVALSLPATRVQMLSVQEMFVLCQQHGYEVDITVQQPASLMEGEVGFTAELDMAA*
Ga0126308_109990602	3300010040	Serpentine Soil	MGRVAARTFIDTRVRSQIASPVSFALGVPATRVQTLSLQEMVVLYQQHGFEVDLTVKQPASLQDGEIAFVTELNVAA*
Ga0126312_105645041	3300010041	Serpentine Soil	LSSSTSLSPRVHAQIASTVSFALGLPATRVQTLSVKEMFVLCQQHGFEVDITVEKPASLNDDEVGFSAELDIAA*
Ga0126312_105833552	3300010041	Serpentine Soil	VVALSKRMGRVAARTFIDTRVRSQIASTVSFALGISATRVQTLSVPEMFVLCQQHGFEVDITVERPASLQDDEIGFVAELNMAA*
Ga0126312_108202821	3300010041	Serpentine Soil	VFSTTSISTRVHAQIVSTVSLALRLPTKRVQALSVQEMFVLCQQHGFEVDITVETPANLNEGEVGYTAELDMAA*
Ga0126312_111845501	3300010041	Serpentine Soil	LPSTSIVTRVRSQIAATVSFALGISATRVQTLSVQEMFVLCQQHGFEVDITVERPANLQDGE
Ga0126312_112161482	3300010041	Serpentine Soil	MDINVPLPSISTRVHAQIASTVSAALGLPAARVQTLSVKEMFVLCQQHGFEVDITVEKPANLHQGGVGLTAELD
Ga0126314_100384351	3300010042	Serpentine Soil	VAARPFIDTRVRSQIASTISFALGVPATRLQTLIVQEMLVLCPQHGFEVDLTVKQPASLQDGEIAFVTELNVAA*
Ga0126314_112020452	3300010042	Serpentine Soil	RAQIASTISLALGIPTTRVQNLSVQEMFVLCQQQGFEVDITVGEPANWNEGEIGFSAELDLTA*
Ga0126310_109709201	3300010044	Serpentine Soil	MDINVPLASISTRVHAQIASTVSAALGLPAARVQTLSVKEMFVLCQQHGFEVDITVEKPANLHQGGIGLTAELDMAA*
Ga0126310_117898672	3300010044	Serpentine Soil	MGRVAARTFIDTRVRSQIASTISFALGVPATRLQTLIVQEMLVLCQQHGFEVDITVEKPAFLNDDEVGLSAELDMAA*
Ga0126311_102364632	3300010045	Serpentine Soil	MGRVAARPFIDTRVRSQIASTISFALGVPATRLQTLIVQEMLVLCPQHGFEVDLTVKQPASLQDGEIAFVTELNVAA*
Ga0126306_102648922	3300010166	Serpentine Soil	VPSTAITPRVHAQIAATVSFALGLPTARVQTLSVQEMFVLCQQHGFEVDIAAEKPASLNDDDVIFVAELDMAA*
Ga0126306_110258311	3300010166	Serpentine Soil	MVQYVDRRVAARTFIDTRVRTQIASTVSFALGVPAIRVQTLSVPEMFVLCQQHGFEVDITVERPASLQDDEIGFVAELHMAA*
Ga0134127_116944611	3300010399	Terrestrial Soil	SLPSTSLSPRVHAQIASTVSLVLGLPATRVQTLSVREMFVLCQQHGFEVDITVERPASLNDDEVDFSAELDMVA*
Ga0134127_123052332	3300010399	Terrestrial Soil	LPSPSLSPRVHAQIASTISFALGLPATRVQTLSVREMFVLCQQHGFEVDITVERPACLNDDEVGLSAELDIAA*
Ga0134122_125476331	3300010400	Terrestrial Soil	PRVHAQIASTVSLVLGLPATRVQTLSFQEMFVLCQQHGFEVDITVEKPASLNDDEVGFSAELDIAA*
Ga0105246_111020121	3300011119	Miscanthus Rhizosphere	IASTVSLVLGLPATRVQTLSVREMFVLCQQHGFEVDITVERPASLNDDEVGFSAELDMAA
Ga0150985_1004701922	3300012212	Avena Fatua Rhizosphere	LSSTSLSPRVLAQIASTVSLVLGLPATRVQTLSVKEMFVLCQQHGFEVDITIKEPAFLNDDEVGFSAEPDMAA*
Ga0150985_1082220872	3300012212	Avena Fatua Rhizosphere	SLPSTSLSPRVHAQIASTVSLVLGLPATRVQTLSVREMFVLCQQHGFAVDITVERPASLNGDEVGFSAELDIAA*
Ga0150985_1132754752	3300012212	Avena Fatua Rhizosphere	MGRVAARTFIDTRVRTQIASIVSFALGVPATRVQTLSVQEMFVLYQQHGFEVGLTVKQPAGLQDGEIAFVTELNVAA*
Ga0150985_1162374762	3300012212	Avena Fatua Rhizosphere	LSSTSLSPRVHAQIASTVSLILGLPATRVQTLSVKEMFVLCQQHGFEVDITVERPASLNDDEVGLSAELDIAA*
Ga0150985_1178025131	3300012212	Avena Fatua Rhizosphere	TISFALGLPATRVQTLSVKEMFVLCQQHGFEVDITVEKPASLNNDEVGLSAELDIAA*
Ga0150985_1178749182	3300012212	Avena Fatua Rhizosphere	TSISTRVHAQIASTVSFALGLPATEVQALSVQEMFVLCQQNGFEVGITAGKLADLNDDEVGFVAELDMAA*
Ga0150985_1183472491	3300012212	Avena Fatua Rhizosphere	LSSSTSLSPRVHAQIASTVSFALGLPATRVQVLSFQEMFVLCQQHGFEVDITVERPASLNDDEVGFSAELDMAA*
Ga0150985_1206012492	3300012212	Avena Fatua Rhizosphere	MPPSSTSLSPRVHAQIASTVSLDLGLPATRVQTLSVKEMFVLCQQHGFAVDITVEEPASLNDDEVGFSAELDMAA*
Ga0150985_1209669322	3300012212	Avena Fatua Rhizosphere	LSSTSLSPLVHAQIASTISFALGLPATRVQSLTVREMFVLCQQHGFEVDITVEKPASLNDDEVAFSAELDMAA*
Ga0150984_1046366043	3300012469	Avena Fatua Rhizosphere	LISTRVHAQIAATVSSALGLPAARVQTLSVKEMLVLCQQHGFEVDITVEKPANFRTDQVGLSAELDMAA*
Ga0150984_1065381373	3300012469	Avena Fatua Rhizosphere	LLSPRVHAQIASTVSFALGLPATRVQTLSVREMFVLCQQHGFEVDITGERPASLNDDEVGFSAELDIAA*
Ga0150984_1095295982	3300012469	Avena Fatua Rhizosphere	VSPRTSIDTRVRSQIASTVSFALGFPAQRIQTLTLQEIFVLCQQHGFEVDITVETPATLGSDEVGFAAELDMAA*
Ga0150984_1129554711	3300012469	Avena Fatua Rhizosphere	TTSISTRVHAQIASTVSFALGLPATEVQALSVQEMFVLCQQNGFEVGITAGKPADLNDDEVGFVAELDMAA*
Ga0150984_1162656411	3300012469	Avena Fatua Rhizosphere	RVHAQIASTVSLVLGLPATRVQTLSVREMFVLCQQHGFEVDITVERPASLNDDEVGFSAELDRAA*
Ga0164301_111994411	3300012960	Soil	VSPRTSIDTRVRSQIASTVSFALGLPAPRIQRLTLQEIFVLCQQHGFEVDITVEAPANYDGYDAGFTAELDMAA*
Ga0164306_117833241	3300012988	Soil	LALGLPAPRIQTLTLQEIFVLCQQHGFEVEITVETPATLGGDEVGFAAELDMAA*
Ga0163162_101941863	3300013306	Switchgrass Rhizosphere	VSPRTSIDTRVRSQIASTVSFALGLPAPRIQTLTLQDIFVLCQQHGFEVDITVEAPANYDGYDAGFTAELDMAA*
Ga0163162_113673591	3300013306	Switchgrass Rhizosphere	VHVQIASTVSVALGLPATRVQTLSVKEMFVLCQQHGFAVDITVEDPASLNDDEVGLSAELDSAA*
Ga0157375_111122442	3300013308	Miscanthus Rhizosphere	VSPRTSIDTRVRSQIASTVSFALGLPAPRVQTLTLQEIFVLCQQHGFEVDITVGTPANYDGDEVGFTAELDMAA*
Ga0157375_125055571	3300013308	Miscanthus Rhizosphere	MRLSSTAIDTRVRAQIASTVSVALGLPPTRMQSLSVQEMFVLCQEFGFEVDITVGEPANGNNEMGFSVELDLAA*
Ga0163163_128529031	3300014325	Switchgrass Rhizosphere	LSSPSLSPRVHTQIAATVSLVLGLPATRVQTLSVREMFVLCQQHGFEVDITVEAPASLNDDEVGLSAELDM
Ga0182001_100682562	3300014488	Soil	MGRVAARTFIDTRVRSQIAATVSFALGISATRVQTLSVQEMFVLCQQHGFEVDITVEKPTSLRDGEIGFATELNVAA*
Ga0182008_107125701	3300014497	Rhizosphere	VRAQIASTVSLALGLAPTRVQCLTVQEMFVLCQQFGFEVDITVGEPANWNNEMGFSVELDLAA*
Ga0157379_111481301	3300014968	Switchgrass Rhizosphere	LSSPSLSPRVHAQIASTVSLVLGLPATRVQTLSVGEMFVLCQQHGFAVDITVEEPASLNDDEVGFSAELDIAA*
Ga0132256_1015998051	3300015372	Arabidopsis Rhizosphere	SPRVHAQIASTVSLVLGLPATRVQVLSVKEMFVLCQQHGFAVDITVERPASLNDDEVSFSAELDIAA*
Ga0132257_1022156622	3300015373	Arabidopsis Rhizosphere	ECKEKHCLSTSTSVSPRVHPQIASTISFALALPAARVQTLSVREMFVLCQQHGFEVDITVEAPASLNDPASLNDDEVGLSAELDIAA*
Ga0163161_113651882	3300017792	Switchgrass Rhizosphere	LSSSTSLSPRVHAQIASTVSLVLGLPATRVQTLSVREMFVLCQQHGFEVDITVERPASLNDDEVGLSAELDIAA
Ga0190267_112381071	3300019767	Soil	LSSSTSLSPRVHAQIASTVSLILGLPATRVQTLSVREMFVLCQQHGFEVDITVEKPASLNDDEVGLSAELDMAA
Ga0190267_114713731	3300019767	Soil	LPSTSIDTRVRSQIASTISFALGVPATRVQTLSVQEMFVLCQQHGFEVDITVEKPAALRKGEVGIVAELDMAA
Ga0207688_100527043	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	LSTSTSVSPRVHAQIASTISFALALPAARVQTLSVREMFVLCQQHGFEVDITVEKPAVFQGDEVGFVAELDMAA
Ga0207688_100580232	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	LPSTSLSPRVHAQIASTVSLVLGLPATRVQTLSVREMFVLCQQHGFEVDITVERPASLNDDEVGFSAELDMVA
Ga0207647_106470592	3300025904	Corn Rhizosphere	SPRVHAQIASTISFALALPAARVQTLSVREMFVLCQQHGFEVDITVERPASLNDHEVGFSAELDIAA
Ga0207694_114549762	3300025924	Corn Rhizosphere	LSSSTSLSPRVHAQIASTVSLVLGLPATRVQTLSVREMFVLCQQHGFEVDITVEKPASLNNDEVAFVAELDMAA
Ga0207644_115191671	3300025931	Switchgrass Rhizosphere	LSTSTSVSPRVHAQIASTISFALALPAARVQTLSVREMFVLCQQHGFEVDITVERPASLNDDEVGFSAELDIAA
Ga0207709_114607471	3300025935	Miscanthus Rhizosphere	HREEDRVSPRTSIDTRVRSQIASTVSFALGLPAPRVQTLTLQEIFVLCQQHGFEVDITVEAPASYDGYDAGFTAELDMAA
Ga0207677_103544263	3300026023	Miscanthus Rhizosphere	LSSSASLSPRVHAQIASTVSLVLGLPATRVQTLSVREMFVLCQQHGFEVDITVERPASLNDDEVGFSAELDIAA
Ga0207641_120272421	3300026088	Switchgrass Rhizosphere	VSPRTSIDTRVRSQIASTVSFALGLPAPRIQTLTLQEIFVLCQQHGFEVDITVGTPANYDGDEVGFTAELDMAA
Ga0207676_125700681	3300026095	Switchgrass Rhizosphere	LPSTSLSPRVHAQIASTVSLVLGLPATRVQTLSVREMFVLCQQHGFEVDITVGERASLNDDEVGFSAELDIAA
Ga0268265_121021612	3300028380	Switchgrass Rhizosphere	LSSPSLSPRVHTQIASTVSLVLGLPATRVQTLSVGEMFVLCQQHGFEVDITVEAPASLNDDEVAFVAELDMAA
Ga0268250_103454721	3300030692	Agave	VRAQIASTISLALGIPTTRVQNLSVQEMFVLCQQQGFEVAITVEKPARLQDDEIGFVTELRLAA
Ga0314788_049971_587_811	3300034666	Soil	VSPRTSIDTRVRSQIASTVSFALGLPAPHIQRLTLQEIFVLCQQHGFEVDITVEAPANDDGYDAGFTAELDMAA