Metagenome / Metatranscriptome Family F093475

Basic Information
Family ID	F093475
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	52 residues
Representative Sequence	VRWRLQRVSLSPEEAGLCGCWQFLAVWRERQELRQGKVTEQSEEYSFYCTSAAPK
Number of Associated Samples	97
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	91.51 %
% of genes near scaffold ends (potentially truncated)	99.06 %
% of genes from short scaffolds (< 2000 bps)	99.06 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Bacteria (99.057 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (11.321 % of family members)
Environment Ontology (ENVO)	Unclassified (25.472 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (30.189 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 32.53% Coil/Unstructured: 67.47%
Feature Viewer

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Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF01609	DDE_Tnp_1	28.30
PF13808	DDE_Tnp_1_assoc	23.58
PF14236	DUF4338	17.92
PF02954	HTH_8	0.94
PF13358	DDE_3	0.94
PF00180	Iso_dh	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	28.30
COG3293	Transposase	Mobilome: prophages, transposons [X]	28.30
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	28.30
COG5421	Transposase	Mobilome: prophages, transposons [X]	28.30
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	28.30
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	28.30

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.06 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.06 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.06 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	93.40 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	93.40 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	86.79 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	4.72 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	86.79 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	4.72 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	86.79 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	4.72 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	86.79 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	3.77 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.94 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	86.79 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	3.77 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.94 %
Unclassified	root	N/A	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000311\|WSSedA1Ba3DRAFT_1114656	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300001213\|JGIcombinedJ13530_101100023	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1213	Open in IMG/M
3300001245\|JGI12048J13642_10007702	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	644	Open in IMG/M
3300001245\|JGI12048J13642_10007703	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	660	Open in IMG/M
3300002910\|JGI25615J43890_1058628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	646	Open in IMG/M
3300002961\|JGI11641J44799_10166313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	618	Open in IMG/M
3300003369\|JGI24140J50213_10154586	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	731	Open in IMG/M
3300004000\|Ga0055458_10100428	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	797	Open in IMG/M
3300004067\|Ga0055485_10175424	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	597	Open in IMG/M
3300004152\|Ga0062386_100513114	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	974	Open in IMG/M
3300005458\|Ga0070681_11108993	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	712	Open in IMG/M
3300005836\|Ga0074470_11344315	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1142	Open in IMG/M
3300005840\|Ga0068870_10363397	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	932	Open in IMG/M
3300006102\|Ga0075015_100429477	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	750	Open in IMG/M
3300006806\|Ga0079220_10629793	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	770	Open in IMG/M
3300006930\|Ga0079303_10221286	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	763	Open in IMG/M
3300009090\|Ga0099827_10581968	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	965	Open in IMG/M
3300009131\|Ga0115027_10289893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1095	Open in IMG/M
3300009131\|Ga0115027_11443658	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300009167\|Ga0113563_10734191	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300009169\|Ga0105097_10621814	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	608	Open in IMG/M
3300009171\|Ga0105101_10340597	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	727	Open in IMG/M
3300009509\|Ga0123573_10240827	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1769	Open in IMG/M
3300009623\|Ga0116133_1222461	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300009644\|Ga0116121_1029813	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1729	Open in IMG/M
3300009764\|Ga0116134_1350932	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	506	Open in IMG/M
3300009838\|Ga0116153_10452162	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300010036\|Ga0126305_10895185	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	606	Open in IMG/M
3300010341\|Ga0074045_10137263	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1669	Open in IMG/M
3300010401\|Ga0134121_11653610	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	662	Open in IMG/M
3300012096\|Ga0137389_10691250	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	876	Open in IMG/M
3300012096\|Ga0137389_10794165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	813	Open in IMG/M
3300012207\|Ga0137381_10186809	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1794	Open in IMG/M
3300012210\|Ga0137378_10208609	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1819	Open in IMG/M
3300012527\|Ga0136633_1158197	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	871	Open in IMG/M
3300012685\|Ga0137397_10554936	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300012917\|Ga0137395_10119646	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1772	Open in IMG/M
3300012971\|Ga0126369_12813681	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	569	Open in IMG/M
3300013315\|Ga0173609_10415058	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	613	Open in IMG/M
3300014160\|Ga0181517_10084047	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1880	Open in IMG/M
3300014306\|Ga0075346_1124110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
3300014493\|Ga0182016_10522651	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300014494\|Ga0182017_10132996	All Organisms → cellular organisms → Bacteria	1616	Open in IMG/M
3300014494\|Ga0182017_10340371	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	934	Open in IMG/M
3300014498\|Ga0182019_10715155	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	711	Open in IMG/M
3300014880\|Ga0180082_1042526	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	959	Open in IMG/M
3300014883\|Ga0180086_1075491	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	836	Open in IMG/M
3300015241\|Ga0137418_10241158	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1539	Open in IMG/M
3300016294\|Ga0182041_11713006	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300017935\|Ga0187848_10067286	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1685	Open in IMG/M
3300017941\|Ga0187850_10514378	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	517	Open in IMG/M
3300017946\|Ga0187879_10507821	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	669	Open in IMG/M
3300017975\|Ga0187782_11562049	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300018075\|Ga0184632_10473513	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300018088\|Ga0187771_11226751	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	636	Open in IMG/M
3300019788\|Ga0182028_1145565	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300020170\|Ga0179594_10081380	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1142	Open in IMG/M
3300021086\|Ga0179596_10575036	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300023311\|Ga0256681_11610339	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	730	Open in IMG/M
3300025852\|Ga0209124_10382241	Not Available	513	Open in IMG/M
3300027703\|Ga0207862_1212607	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300027775\|Ga0209177_10245935	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	658	Open in IMG/M
3300027825\|Ga0209039_10089020	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1338	Open in IMG/M
3300027871\|Ga0209397_10651513	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300027882\|Ga0209590_10325732	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	988	Open in IMG/M
3300027890\|Ga0209496_10495124	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	648	Open in IMG/M
(restricted) 3300027995\|Ga0233418_10076559	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	975	Open in IMG/M
3300028556\|Ga0265337_1132115	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	676	Open in IMG/M
3300028785\|Ga0302201_10331320	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300028800\|Ga0265338_11099691	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	535	Open in IMG/M
3300028857\|Ga0302289_1103617	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	655	Open in IMG/M
3300029889\|Ga0246001_1088120	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300029957\|Ga0265324_10033489	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1792	Open in IMG/M
3300029984\|Ga0311332_10990269	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	674	Open in IMG/M
3300030000\|Ga0311337_10346757	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1249	Open in IMG/M
3300030048\|Ga0302273_1169967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	638	Open in IMG/M
3300030052\|Ga0302217_10051598	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	902	Open in IMG/M
3300031238\|Ga0265332_10459555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300031240\|Ga0265320_10194442	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	906	Open in IMG/M
3300031241\|Ga0265325_10527180	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300031242\|Ga0265329_10130832	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	808	Open in IMG/M
3300031344\|Ga0265316_10830689	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300031344\|Ga0265316_10957864	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	596	Open in IMG/M
3300031524\|Ga0302320_10002925	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	39908	Open in IMG/M
3300031525\|Ga0302326_11055731	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1134	Open in IMG/M
3300031712\|Ga0265342_10520361	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	605	Open in IMG/M
3300031726\|Ga0302321_101912581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	688	Open in IMG/M
3300032160\|Ga0311301_12999322	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300032177\|Ga0315276_12055415	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300032397\|Ga0315287_10897476	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1037	Open in IMG/M
3300032782\|Ga0335082_10861472	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	768	Open in IMG/M
3300032892\|Ga0335081_10730309	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1196	Open in IMG/M
3300032893\|Ga0335069_12324243	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	558	Open in IMG/M
3300032897\|Ga0335071_10235212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1786	Open in IMG/M
3300032897\|Ga0335071_10925425	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	819	Open in IMG/M
3300032955\|Ga0335076_10543421	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1045	Open in IMG/M
3300033402\|Ga0326728_10251699	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1681	Open in IMG/M
3300033407\|Ga0214472_10884612	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	798	Open in IMG/M
3300033486\|Ga0316624_11581519	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	604	Open in IMG/M
3300033521\|Ga0316616_100313426	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1674	Open in IMG/M
3300033521\|Ga0316616_103405117	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300033521\|Ga0316616_104556630	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300033557\|Ga0316617_100378224	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1239	Open in IMG/M
3300033557\|Ga0316617_100752048	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	927	Open in IMG/M
3300033977\|Ga0314861_0297425	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	729	Open in IMG/M
3300034090\|Ga0326723_0473380	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.74%
Host-Associated	Host-Associated	10.38%
Engineered	Engineered	1.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.66%
Aquatic	Environmental → Aquatic	32.08%
Plants	Host-Associated → Plants	10.38%
Wastewater	Engineered → Wastewater	1.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.40%
Freshwater	Environmental → Aquatic → Freshwater	19.81%
Peat	Environmental → Terrestrial → Peat	11.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.43%
Marine	Environmental → Aquatic → Marine	6.60%
Sediment	Environmental → Aquatic → Sediment	5.66%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.94%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.94%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	20.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	20.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.32%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.43%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.66%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.72%
Lake	Environmental → Aquatic → Freshwater → Lake	3.77%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.89%
Loam	Environmental → Terrestrial → Soil → Loam	1.89%
Ice	Environmental → Aquatic → Freshwater → Ice	0.94%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.94%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.94%
Mine Water	Engineered → Wastewater → Industrial Wastewater → Mine Water	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	16.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.15%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.43%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.66%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.66%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.72%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.77%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.83%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	2.83%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.89%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.94%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.94%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.94%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.94%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	11.32%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	9.43%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.72%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	3.77%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	3.77%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.83%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	2.83%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.89%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.89%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.89%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.89%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.89%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.94%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.94%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.94%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.94%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.94%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.94%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.94%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.94%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.94%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.94%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.94%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.94%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.94%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.94%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.94%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000311	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001245	Estuarine microbial mat communities from Elkhorn Slough, Moss Landing, CA, USA - CR3B Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002961	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300004000	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D2	Environmental	Open in IMG/M
3300004067	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009509	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009838	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC028_MetaG	Engineered	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012527	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013315	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1B	Engineered	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014306	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D1	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300025852	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027995 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_1_MG	Environmental	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028857	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_2	Environmental	Open in IMG/M
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental	Open in IMG/M
3300029957	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG	Host-Associated	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030048	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_3	Environmental	Open in IMG/M
3300030052	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_3	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031242	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093475

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
WSSedA1Ba3DRAFT_11146562	3300000311	Wetland	LVRWRLQRVSLSPEEAGLCGCWQFIAVWRERKELRQGKVTEESEEYSFYCTSAAP
JGIcombinedJ13530_1011000231	3300001213	Wetland	LVRWRLQRVSLSPEEAGLCGCWQFLAVWRQRQELRQGKVTEQSEE
JGI12048J13642_100077022	3300001245	Estuarine	LTRWRIQRKTVTPEEAGLCGCRQFIAVWRERHYLRRGRVYKEEQEYSFYVSSVDPQRYDE
JGI12048J13642_100077031	3300001245	Estuarine	LTRWRIQRKTVTPEEAGLCGCRQFIAVWRERHYLRRGRVYKEEQEYSFYVSS
JGI25615J43890_10586282	3300002910	Grasslands Soil	LVRWRIQRVSLSPEEAGLCGCWQFLAIWRERQELRAGKVVEQSEEY
JGI11641J44799_101663131	3300002961	Wetland	LVRWRLQRVSLSPEEAGLCGCWQFIAVWRERKELRQGKVTEESEEYSFYCTSAAPKQYGA
JGI24140J50213_101545862	3300003369	Arctic Peat Soil	VRWRLQRASVSPEEAGLCGCWQFLAVWRERQELRAGKVTEQSEEYSF
Ga0055458_101004281	3300004000	Natural And Restored Wetlands	LVRWRLQRVSVSPEEAGLCGCWQFLAVWRERQELRAGKVTEQSQEYAFYGTSTAPQQYSARQLLQAI
Ga0055485_101754242	3300004067	Natural And Restored Wetlands	LVRWRIQRVTVSPEEAGLCGCWQFLAVWRQRQELRQGKVTEESEEYSFYATSAASE
Ga0062386_1005131142	3300004152	Bog Forest Soil	VRWRIQRVSVSPEEAGLCGCWQFLAVWRERQELRAGKVVEQSEEYSFYCTSAAPKQYS
Ga0070681_111089932	3300005458	Corn Rhizosphere	LERCRLQRVALSPQEAGLCGCWQFIALWRQREELRQGKVIKQEEEYQFYCSSLA
Ga0074470_113443151	3300005836	Sediment (Intertidal)	VRWRLQRFSLSPEEAGLCGCWQFIAVWRERQELRAGKVTEQSEEYAFYCTSAAPKQYSA
Ga0068870_103633971	3300005840	Miscanthus Rhizosphere	VRWRLQRVNLSPEEAGLCGCWQFVAVWRERQELRQGKVTEQSAEYSFY
Ga0075015_1004294771	3300006102	Watersheds	LVRWRLQRVSVSPEEPGLCGCWQFIAVWRERQELRAGKVTEQSEEYSFYCTSAAPEQYSARQLLQ
Ga0079220_106297932	3300006806	Agricultural Soil	LVRWRIQRVTVSPEEAGLCGCWQFLAVWRERQELRRGK
Ga0079303_102212861	3300006930	Deep Subsurface	VRWRLQRVSLSPEEAGLCGCWQFLAVWRERQELRQGKVTEQSEEYSFYCTSAAPK
Ga0099827_105819682	3300009090	Vadose Zone Soil	LVRWRLQRVSLSPEEAGLCGCWQFVAVWRERKELRQGKVIEESQEYSFYCTSAA
Ga0115027_102898932	3300009131	Wetland	VRWRLQRVSLSPEEAGLCGCWQFLAVWRERQELRQGKVTEQSEEYSFYCTSAAPKQY
Ga0115027_114436581	3300009131	Wetland	VRWRLQRVSVSPEEAGLCGCWQFLAVWRERQELRAGKVTEQSKEYAFYCTSAAPKQYSA
Ga0113563_107341911	3300009167	Freshwater Wetlands	LERWRLQRVSVTPEQAGLTGCWQFIALWRDRQQLRKGKVLEQSQEYSF
Ga0105097_106218142	3300009169	Freshwater Sediment	VRWRIQRVTVSPEEAGLCGCWQFLALWRERQDLRRGNVVATSEEYAFYCTSAAPTPYSA
Ga0105101_103405971	3300009171	Freshwater Sediment	LVRWRLQRVSLSPEEAGLCGCWQWIAVWRERQELRQGKVTEQSEEYSFYCTSAAPKQYSAPQLLQA
Ga0123573_102408272	3300009509	Mangrove Sediment	VSLSPEEAGLCGCWQFIAVWREQKHLRRGKVIKEFEEYSFYSTSAAPEQYGAAQLLGV
Ga0116133_12224612	3300009623	Peatland	LVRWRLQRVSLSPEEAGLCGCWQFLAVWRERQELRQGKVIEES
Ga0116121_10298131	3300009644	Peatland	LVRWRLQRVSLSPEEAGLCGCWQFIAVWRERKELRQGKVTEESEEYSFYC
Ga0116134_13509322	3300009764	Peatland	LVRWRLQRVSLSPEEAGLGGCWQWIAVWRERQELR
Ga0116153_104521621	3300009838	Anaerobic Digestor Sludge	LARWRIQRLTVSPEQAGLCGCWQFLAVWRERQELRRGKVIDSSEEYSFYCTSAAPKQYS
Ga0126305_108951851	3300010036	Serpentine Soil	VAVTPENSGLCGCWQFVAVWRERQQLRAGQVTARAQEYSFYCTSLAQQERNPEQ
Ga0074045_101372631	3300010341	Bog Forest Soil	LVRWRLQRVNVSPEEAGLCGCWQFIAVWREQKLLRRGRVVKQFEEYAFYATSAAPEQYSAAQL
Ga0134121_116536101	3300010401	Terrestrial Soil	VRWRVQRVSLSPEEAGLCGCWQFLAVWRERQELRQGKVSEQSQEYSFYCTSAAPAQ
Ga0137389_106912501	3300012096	Vadose Zone Soil	LVRWRIQRVSLSPEEAGLCGCWQFLAIWRERQELRAGKVVEQSEEYSF
Ga0137389_107941652	3300012096	Vadose Zone Soil	VRWRVQRVGLSPEEAGLCGCWQFLAVWRERQELRQGKV
Ga0137381_101868093	3300012207	Vadose Zone Soil	LVRWRLQRVSLSPEEAGLCGCWQFLAVWRERQELRQGKVTEASEEY
Ga0137378_102086093	3300012210	Vadose Zone Soil	LVRWRIQRASLSPEEAGLCGCWQFIAVWRERKELRQGKVTEESEEYSFYSTSVA
Ga0136633_11581971	3300012527	Polar Desert Sand	VQRCALSPEDAGLTGCTQFVAVRRERQQLRRGKVVESSSEF
Ga0137397_105549362	3300012685	Vadose Zone Soil	LVRWRLQRVSLSPEEAGLCGCWQFVAVWRERKVLRQGKVNEESEEYSF
Ga0137395_101196463	3300012917	Vadose Zone Soil	LVRWRLQRVSLSPEDAGLCGCWQLMAVWREQKKLRKGKVIEEFEEYSFYCTSAA
Ga0126369_128136812	3300012971	Tropical Forest Soil	MVRWRLQRASLSPEQAGLCGCWQFIAVWRERQELRGSKVIDSSEEYAFYC
Ga0173609_104150582	3300013315	Sediment	LVRWRIQRVTVSPEEAGLCGCWQFLAVWRERQELRRGKVVETSEEYAFYCTSAAPKQYSAHRLL
Ga0181517_100840472	3300014160	Bog	LVRWRLQRVSLSPEEAGLCGCWQFIAVWRERKELRQGKVTEESEEYSFYCTSAAPKQYSA
Ga0075346_11241101	3300014306	Natural And Restored Wetlands	VDPETAGLTGCWQFIAMWRERQELCDGKVAHESQEYSFYVTSLDEDQATAQELAQH
Ga0182016_105226512	3300014493	Bog	LVRWRLQRVSLSPEEAGLCGCWQFIAVWRERKELRQGKV
Ga0182017_101329961	3300014494	Fen	VRWRLQRFSLSPEEAGLCGCWQFLAVWREREELRQGKVT
Ga0182017_103403712	3300014494	Fen	MRWRLQRQSLSPEEAGLCGCWQFIAVWRQRQELRAGKVVESSEEYAFYCTSAAP
Ga0182019_107151552	3300014498	Fen	LQRVSLSPEAAGLCGCWQFIAVWRERKELRQGKVTEESEEYSFYCTSAAPKQ*
Ga0180082_10425262	3300014880	Soil	VTLSPEEAGLCGCWQFIAVWRQREQLRQGKVTETE
Ga0180086_10754911	3300014883	Soil	LVRWRLQRVSVSPEEAGLCGCWQFVAVWREQKELRRGKIIKESEEYSFYCTSAAPAQYS
Ga0137418_102411581	3300015241	Vadose Zone Soil	LERCRLQRIEIDPENAGLCGCWQFIAVWRERQKLRKGQVVETS
Ga0182041_117130061	3300016294	Soil	LVRWRIQRVTVSPQEAGLCGCWQLLAVWRERQELRQGKVVETSEDYAFY
Ga0187848_100672863	3300017935	Peatland	LVRWRLQRVSLSPEEAGLCGCWQFIAVWRERQELRKGKVIEQSEEYAFYCT
Ga0187850_105143782	3300017941	Peatland	VRWRLQRVSLSPEEAGLCGCWQFIAVWRERKELRQGKVTEESEEYSFYCTSAAPK
Ga0187879_105078212	3300017946	Peatland	VRWRLQRVSLSPEEAGLCGCWQFIAVWRERKELRQGKVTEESEEYSFYCTS
Ga0187782_115620492	3300017975	Tropical Peatland	VRWRLQRVSLSPEEAGLCGCWQFLAVWRERQELRAGKVTEQSEEYAFYCTSAAPGQYSAR
Ga0184632_104735132	3300018075	Groundwater Sediment	LVRWRLQRVGLSPEEAGLCGCWQFVAVWRERKELRQGKVIEESE
Ga0187771_112267511	3300018088	Tropical Peatland	VRWRLPRVSLSPEEAGLCGCWQFIAVWRERQELRQGKVTEQSEEYSFYCTSAAPQQ
Ga0182028_11455651	3300019788	Fen	VRWRLQRFSLSPEEAGLCGCWQFLAVWREREELRRGKVTEKSEEYRSPK
Ga0179594_100813802	3300020170	Vadose Zone Soil	VRWRIQSVSLSPEEAGLCGCWQFLAVWRERQELRAGKVVEQSQEYSFYCTSAAPK
Ga0179596_105750362	3300021086	Vadose Zone Soil	VRWRIQRVSLSPEEAGLCGCWQFLAVWRERQELRAGKVVEQSQEYSFYCTSA
Ga0256681_116103392	3300023311	Freshwater	VRWRLQRTTLSPEAAGLCGCWQFIAVWRQRQELRQGKVTAESEEYSYYCTSAAPEQYDAP
Ga0209124_103822412	3300025852	Arctic Peat Soil	VRWRIQRVNLSPEEAGLCGCWQFLAVWRERQELRQGKVTKESQEYSYYCTSAAPD
Ga0207862_12126072	3300027703	Tropical Forest Soil	LVRWRIQRFSVSPEEAGLCGCWQFLAVWRDRQQLRAGKVTEQSEEYSFYCTSAAPEQYRA
Ga0209177_102459351	3300027775	Agricultural Soil	HGRLERCRLQRVALSPQEAGLCGCWQFIALWRQREELRQGKVIKQEEEY
Ga0209039_100890202	3300027825	Bog Forest Soil	VRWRIQRVSLSPEEAGLCGCWQFLAVWRERQELRAGKVVEQSEEYSFYCTSAAPKQYS
Ga0209397_106515131	3300027871	Wetland	LERWRLQRVSVTPEQAGLTGCWQFIALWRDRHQLRKGKVLEQSQEYSFYVT
Ga0209590_103257322	3300027882	Vadose Zone Soil	VRWRLQRVSLSPEEAGLCGCWQFVAVWRERKELRQGKVIEESQEYSFYCTSAAKDQ
Ga0209496_104951242	3300027890	Wetland	VRWRLQRVSVSPEEAGLCGCWQFLAVWRERQELRAGKVTEQSQEYAF
(restricted) Ga0233418_100765591	3300027995	Sediment	VRWRLQRFSLSPEEAGLCGCWQFIAVWRERQELRHGKVTEQSQEYSFYATSAAP
Ga0265337_11321151	3300028556	Rhizosphere	LVRWRIQRVSLSPEEAGLCGCWQFLAVWRERQELRKGKVVQQSEEYAFYCTSAA
Ga0302201_103313201	3300028785	Bog	VRWRLQRVSLSPEEAGLCGCWQFLAVWRERQELRQGKVIEESEEYSFYCTSAACGQYS
Ga0265338_110996911	3300028800	Rhizosphere	VRWRLQRVSLSPEEAGLCGCWQFIAVWRERKELRQGKVREESEEYSFYCTSA
Ga0302289_11036172	3300028857	Fen	LVRWRLQRVSVSPEEAGLCGCWQFIAVWRERQELRAGKVTEQSEEYSFYCTSAAPE
Ga0246001_10881201	3300029889	Peat	LVRWRLQRVSLSPEEAGLCGCWQFIAVWRERQELRKGKVIEQSEEYAFYCTSAAPKQY
Ga0265324_100334892	3300029957	Rhizosphere	VRWRIQRVSVSPEEAGLCGCWQFLAVWRERQELRAGKVV
Ga0311332_109902691	3300029984	Fen	LVRWRLQRVSVSPEEAGLCGCWQFIAVWRERQELRAGKVTQQSEEYSFYCTSAAPEQYS
Ga0311337_103467572	3300030000	Fen	VRWRLQRVSLSPEEAGLCGCWQFIAVWRERKELRQGKVTEESE
Ga0302273_11699672	3300030048	Bog	LVRWRLQRVSVSPEEAGLCGCWQFIAVWRERQELRAGKVTQQSEEYSFYCTSAAPEQ
Ga0302217_100515982	3300030052	Fen	LVRWRLQRVSVSPEEAGLCGCWQFIAVWRERQELRAGKVTQQSEEYSFYCTSAAPEQY
Ga0265332_104595552	3300031238	Rhizosphere	VRWRLQRVSLSPEEAGLCGCWQFIAVWRERKELRQGKVTEESEEYSFYCTSA
Ga0265320_101944422	3300031240	Rhizosphere	VRWRIQRVSVSPEEAGLCGCWQFLAVWRERQELRAGKVVEQSEE
Ga0265325_105271801	3300031241	Rhizosphere	VRWRLQRVSLSPEEAGLCGCWQLLAVWRERQELRQGKVVEESEEYSFYCTSAAPEQYSAQQLLG
Ga0265329_101308322	3300031242	Rhizosphere	VRWRLQRISLSPEEAGLCGCWQFLAVWRERQELRAGKVIGFSEEYAFYCTSAAPKQYSAR
Ga0265316_108306891	3300031344	Rhizosphere	VRWRIQRVSVSPEEAGLCGCWQFLAVWRERQELRAGKVVEQSEEYSFYCTSAA
Ga0265316_109578641	3300031344	Rhizosphere	VRWRLQRTTLSPEAAGLCGCWQFIAVWRQRQELRQGKVTAESEEY
Ga0302320_100029251	3300031524	Bog	MRDWKRNIISPEESGLCGCWQFLAVWRERQELRQGKVTEQS
Ga0302326_110557312	3300031525	Palsa	LVRWRLQRVSLSPEEAGLCGCWQLIAVWRERKELR
Ga0265342_105203612	3300031712	Rhizosphere	VRWRIQTKGVTPEEAGLCGCWQFVAVWRERQELRQGKVIDQSQEYSFYATSAAPGQYSA
Ga0302321_1019125812	3300031726	Fen	LVRWRIQRVTVSPEEAGLCGCWQFLAVWRERQELRRGKVVQTSEEYAFYCTSAAPK
Ga0311301_129993221	3300032160	Peatlands Soil	LVRWRIQRVSRSPEEAGLCGCWQFLAVWRERQDLRQGKVTEQSEEYSFYVTSAAPKQYTA
Ga0315276_120554152	3300032177	Sediment	LVRWRIQTKGVTPEEAGLCGCWQFVAVWRERQELRQGKVIDESEEYSFYATSAAPGQ
Ga0315287_108974761	3300032397	Sediment	VRWRLQRVSLSPEEAGLCGCWQFLAVWRERQELRQGKVTE
Ga0335082_108614722	3300032782	Soil	VRWRLQRVSLSPEEAGLCGCWQFLAVWRERQELRQGKVIEESEEYSFYCTSAACGQYSAQQWL
Ga0335081_107303091	3300032892	Soil	VRWRLQRVSVSPEEVGLCGCWQFIAVWREQKKLRQGKVVEECEEYSFYATSAAPKQY
Ga0335069_123242432	3300032893	Soil	VRWRLQRVSLSPEDAGLCGCWQFVAVWRERQELRAGKVTEQSQEYA
Ga0335071_102352123	3300032897	Soil	VRWRLQRVSLSPEEAGLCGCWQFIAVWRERQELRAGKVTEQSQEYAFYCTSAAPDQYSARQLLQAI
Ga0335071_109254252	3300032897	Soil	VRWRLQRVSLSPEEAGLCGCWQFIAVWRERQELRQGKVTEQSEE
Ga0335076_105434211	3300032955	Soil	LVRWRIQRASVSPEEAGLCGCWQFLAVWRQRQELRQGKVTEES
Ga0326728_102516993	3300033402	Peat Soil	LVRWRLQRVSLSPEEAGLCGCWQFLAVWRERQELRQGKVIEESEEYSFYCTSLAPGQYTAQQLLGK
Ga0214472_108846122	3300033407	Soil	MRWRIQRVTVSPEDAGLCGCWQFIAVWREQKKLRKGKVIEEHDEYSFYCTS
Ga0316624_115815192	3300033486	Soil	LVRWRIQRASLSPEAAGLCGCWQFLAVWRERQELRAGKVIEPSEEYSFYCTSAAPKQYSARQ
Ga0316616_1003134262	3300033521	Soil	VRWRLQRVSVSPEEAGLCGCWQFLAVWRERQELRAGKVTEQSQEYAFYGTSTAPQ
Ga0316616_1034051172	3300033521	Soil	VRWRLQRVSLSPEAAGLCGCWQFLAVWRERQELRQGKVTEE
Ga0316616_1045566301	3300033521	Soil	LVRWRIQRVTVSPQEAGLCGCWQFLAVWRERQELRQGKVVET
Ga0316617_1003782241	3300033557	Soil	LVRWRIQRVTVSPQEAGLCGCWQFLAVWRERQELRQGKVTEESEEYSFYCTSAAPGQYSA
Ga0316617_1007520482	3300033557	Soil	LVRWRIQRVTVSPEAAGLCGCWQFLAVWRQRQELRRGKVVET
Ga0314861_0297425_1_153	3300033977	Peatland	MRWRIQRVSVSPEEAGLCGCWQFIAVWREQKRLRQGKVVEEFEEYSFYATS
Ga0326723_0473380_3_158	3300034090	Peat Soil	MRWRLQRVSLSPEEAGLCGCWQFIALWRERKELRQGKVTEESEEYSFYCTSA

Hidden Markov Model


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