NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F093455

Metagenome Family F093455

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F093455
Family Type Metagenome
Number of Sequences 106
Average Sequence Length 121 residues
Representative Sequence VSPGWLTRIETVGTTLVVLMIGAMMIWNEAVERERRLAFTLGSAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPG
Number of Associated Samples 84
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 71.70 %
% of genes near scaffold ends (potentially truncated) 33.96 %
% of genes from short scaffolds (< 2000 bps) 72.64 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(24.528 % of family members)
Environment Ontology (ENVO) Unclassified
(21.698 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(33.962 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176
1ICCgaii200_09054882
2ICChiseqgaiiFebDRAFT_108690762
3JGI10216J12902_1074310892
4JGI10216J12902_1083386724
5soilL1_101228253
6soilH1_103990863
7Ga0055471_100148582
8Ga0055468_100194792
9Ga0055466_100026871
10Ga0055469_100499861
11Ga0062593_1010529642
12Ga0062589_1017316842
13Ga0066599_1001625573
14Ga0062591_1003529323
15Ga0068870_112541852
16Ga0075428_1014905811
17Ga0075421_1002881443
18Ga0075420_1003348371
19Ga0075429_1007498082
20Ga0079216_105042231
21Ga0079218_127832162
22Ga0111539_112392591
23Ga0114129_104921253
24Ga0114129_113363882
25Ga0111538_102937563
26Ga0105092_101376422
27Ga0105062_10861272
28Ga0136623_103547212
29Ga0137434_10189582
30Ga0075314_10024733
31Ga0075316_10214651
32Ga0190266_104780771
33Ga0184626_104354001
34Ga0184623_104802751
35Ga0184615_100191212
36Ga0184637_102371282
37Ga0184632_104212311
38Ga0184609_102956662
39Ga0184609_105135511
40Ga0184612_100116684
41Ga0190265_1000070325
42Ga0190265_100570891
43Ga0190265_100822103
44Ga0190265_100961833
45Ga0190265_103434202
46Ga0190265_103984132
47Ga0190265_111737112
48Ga0190265_112051372
49Ga0190265_123587972
50Ga0190272_123049001
51Ga0190270_101031835
52Ga0190274_100401845
53Ga0190264_105696522
54Ga0190264_110901972
55Ga0187893_100325753
56Ga0210378_100184175
57Ga0210378_102206151
58Ga0210377_101115923
59Ga0196959_100297302
60Ga0209640_100227564
61Ga0210087_10368002
62Ga0210076_10055912
63Ga0210113_11244882
64Ga0209842_10925081
65Ga0214468_11822412
66Ga0209485_11918062
67Ga0209382_105864863
68Ga0247828_105554462
69Ga0247818_104102961
70Ga0247823_115313182
71Ga0247822_104874833
72Ga0247820_100149317
73Ga0247819_109262691
74Ga0307318_102346751
75Ga0247825_100258943
76Ga0247825_106004721
77Ga0307314_101128983
78Ga0299907_101246653
79Ga0299907_105288922
80Ga0299907_109198201
81Ga0299906_100666173
82Ga0299906_111080861
83Ga0268386_107820002
84Ga0302046_100838972
85Ga0302046_101677161
86Ga0299913_100268605
87Ga0299913_100426893
88Ga0299913_101790892
89Ga0307410_104852351
90Ga0310892_107838852
91Ga0307407_102532713
92Ga0307409_1000509813
93Ga0307409_1017190262
94Ga0307416_1004494223
95Ga0307416_1028475632
96Ga0310902_108600742
97Ga0310906_100960282
98Ga0310890_100921302
99Ga0307415_1022527041
100Ga0315910_100459392
101Ga0214471_102754793
102Ga0247829_105872561
103Ga0364940_0081345_401_772
104Ga0364942_0004596_3779_4129
105Ga0364932_0145551_514_885
106Ga0364934_0151527_111_482
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 66.23%    β-sheet: 0.00%    Coil/Unstructured: 33.77%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100110120VSPGWLTRIETVGTTLVVLMIGAMMIWNEAVERERRLAFTLGSAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPGExtracel.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Groundwater Sediment
Polar Desert Sand
Freshwater
Natural And Restored Wetlands
Soil
Groundwater Sediment
Soil
Soil
Agricultural Soil
Sugarcane Root And Bulk Soil
Soil
Soil
Soil
Natural And Restored Wetlands
Soil
Groundwater Sand
Soil
Microbial Mat On Rocks
Sediment
Miscanthus Rhizosphere
Populus Rhizosphere
Rhizosphere
2.8%6.6%7.5%24.5%2.8%2.8%3.8%12.3%4.7%3.8%8.5%6.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICCgaii200_090548822228664021SoilVTGGWLTRIETLGTTIVVLMVGSMVLWYEAVERERGLVVTIGSGMLLYVAVLVLCGRRSAAGSIPWWPFAAAGVVAGAVAELSNAGFLITVELLAAVVTGLVIGTAHWLALRVWIGWTAGELDGQ
ICChiseqgaiiFebDRAFT_1086907623300000363SoilVTRGWLGRIETLGTTVVVLMIGAMMIWFEAVERERWLVVTIGCAVLAYVAVLVLAGRRSEAGGIPWWPFASAGVVTGGVAELLNARFLVTIELLAAVVTGLVIGTAHWVAVRVWIGLGERPPG*
JGI10216J12902_10743108923300000956SoilVSPAWLTRIETIGTTLVVLMIGAMTIWYEAVQRERRLIFTIACAVVLYVGVLVLSGRRAEPGGVPWWPFAAAGVVTGAAAELINARFLVTVELLVAVVTGLVIGTAHWAALRAWIGLGERRPG*
JGI10216J12902_10833867243300000956SoilVTGGWLTRIETLGTTIVVLMVGSMVLWYEAVERERGLVVTIGSGMLLYVAVLVLCGRRSAAGSIPWWPFAAAGVVAGAVAELSNAGFLITVELLAAVVTGLVIGTAHWLALRVWIGWTAGELDGQ*
soilL1_1012282533300003267Sugarcane Root And Bulk SoilMRPGWLTRIETLGTTVVVLMVGAMVIWYEAAVRGHRLAVTLGCAVILYAAVLVLSGLRSSPTRISWWPFAAAGLATGGVAELINARFLITVELLTAVVTGVVIGTAHWLALRVWIGLGRREAT*
soilH1_1039908633300003321Sugarcane Root And Bulk SoilMGEERSVSPAWLTRIETLGTTVVVLMIGAMMLWYEAVEHERRLVVTIASAILLYVGVLAASGRRSDPGGIAWWPFAAAGLVTGGVAELINARFLVTVELGVALGTGLVIGTAHWLALRIWIGLRR
Ga0055471_1001485823300003987Natural And Restored WetlandsVSPGWLTRIETVGTTMVVLMIGAMMIWNEAVERERRLAFTLGCAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVALVTGLGIGTAHWGALRVWIGLGERRPG*
Ga0055468_1001947923300003993Natural And Restored WetlandsVSPGWLTRIETVGTTLVVLMIGAMMIWNEAVERERRLAFTLGCAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVALVTGLGIGTAHWGALRVWIGLGERRPG*
Ga0055466_1000268713300003997Natural And Restored WetlandsVSPGWLTRIETVGTTMVVLMIGAMMIWNEAVERERRLAFTLGCAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVALVTGLVIGTAHWGALRVWIGLGER
Ga0055469_1004998613300003999Natural And Restored WetlandsVVVLMVGGMMIWYEAVERGLRLAVTIGIAVLLYVAVLVLAGRRSAPGRISWWPFGAAGLMTGVAAELINARFLVTRELFLAAGTGLVIGTAQWAALRVWIRLGERAGTGESV*
Ga0062593_10105296423300004114SoilVSPGWLTRIETVGTTLVVLMIGAMMIWNEAVERERRLAFTLASAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELTNARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPG*
Ga0062589_10173168423300004156SoilVSPGWLTRIETVGTTLVVLMIGAMMIWNEAVERERRLAFTLGSAALVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPG*
Ga0066599_10016255733300004282FreshwaterMLGTTAVVLLVGSMMLWYEAVARGRWLAITIGSAVVLYSLLLALLGRRSDPSRVAWWPFAAAGAVTGAVSELINAKFMVTRELFVAAATGIVIGTAQWAALRIWIRLTARHPA
Ga0062591_10035293233300004643SoilVGTTLVVLMIGAMMIWNEAVERERRLAFTLGSAALVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPG*
Ga0068870_1125418523300005840Miscanthus RhizosphereVSPGWLTRIETVGTTVVVLMVGAMMIWNEAVEPERRLAFTLGCAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPG*
Ga0075428_10149058113300006844Populus RhizosphereDRRPVAGELLPVGPVPVTRGWLGRIETLGTTVVVLMIGAMMIWFEAVERERWLVVTIGCAVLAYVAVLVLAGRRSEGGGIPWWPFAAAGVVTGGVAELLNARFLVTIELLAAVVTGLVIGTAHWVAVRVWIGLGERPPG*
Ga0075421_10028814433300006845Populus RhizosphereMRPDWLSRIETLGTTAVVLLVGSMMIWYEAIVRDRWLAFTIGSAVLFYIAALLLFGWRSAPARIAWWPFALTGLATGVVAELINAKFLVTREMFVAAATGVVIGTAHWAALRVWIRLTQRRV*
Ga0075420_10033483713300006853Populus RhizosphereVSPGWLTRIETVGTTLVVLMIGAMMIWNEAVERERRLAFTLGCAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPG*
Ga0075429_10074980823300006880Populus RhizosphereVSPGWLTRIETVGTTLVVLMVGAMMIWNEAVERERRLAFTLGCAVLVYVAVLVIAARRCAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLVERRPG*
Ga0079216_1050422313300006918Agricultural SoilMGDLVARPPGPRWLWRIEMLSTTVVVVMIGSMMLWYESIERERRLLVTIGSAVVLYVAGLVISGQKSDPSRVSWWPFALAGLIAGAVAELINAQFLVTRELLAAVVAGVVIGTAHWIALRVWLHFTGSGAVSPP*
Ga0079218_1278321623300007004Agricultural SoilAMTIWYEAVQRERRLIFTIACAVVLYVGVLVLSGRRAEPGGVPWWPFAAAGVVTGAAAELINARFLVTVELLVAVVTGLVIGTAHWAALRAWIGLGERRPG*
Ga0111539_1123925913300009094Populus RhizosphereVSPGWLTRIETVGTTVVVLMVGAMMIWNEAVERERRLAFTLGCAVLVYVAVLVIAARRSARGSIPWWPFAAAGMLTGGVAELINARFLVTIELLVAVVTGLVIGTAH
Ga0114129_1049212533300009147Populus RhizosphereVSPGWLTRIETVGTTVVVLMVGAMMIWNEAVERERRLAFTLGCAVLVYVAVLVIAARRSARGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPG*
Ga0114129_1133638823300009147Populus RhizosphereVTRGWLGRIETLGTTVVVLMIGAMMIWFEAVERERWLVVTIGCAALAYVAVLVLAGRRSEAGRIPWWPFAAAGVVTGGVAELLNARFLVTIELLAAVVTGLVIGTAHWVAVRVWIGLGERPPG*
Ga0111538_1029375633300009156Populus RhizosphereVSPGWLTRIETVGTTLVVLMIGAMMIWNEAVERERRLAFTLGCAVLVYVAVLVIAARRSARGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGVGERRPG*
Ga0105092_1013764223300009157Freshwater SedimentVTPGWLGRIETFGTTVVVLMIGAMMIWFDAVERESRLAVTIGSAVLVYVAVLVLSGRRAEPVGIPWWPFAAAGVVTGGVAELINARFLVTIELLAAVVTGLVIGTAHWVALRVWIGLGERRPE*
Ga0105062_108612723300009817Groundwater SandMRPDWLSRIETLGTTAVVLMVGSMMIWYEAVERDRRLVLTIGSAVLFYVVALVLFGRRSAPARIAWWPFAFAGLATGAVAELINAKFLVTPEMFVAAATGVVIGT
Ga0136623_1035472123300012045Polar Desert SandMNPDWLARIETLGTTAVVLMVGSMVIWHESVQRGGLLLLTVGSAVALYAVALLVCARRSEPSRVAWWPFALAGLVTGAVAELINARFLLTSELLIAAVTGVVIGTAHWVALRVWLGLTRGVAGGPES*
Ga0137434_101895823300012225SoilMTPSWLARIETLGTTIVVLMVGSMMLWFEAVERERRLAVTIGSAVLLYVAALVVFGRRSEPSRIAWWPFAVAGLVTGAVAELINAKFLVTRELFVAAVTGVAIGTAHWAALRVWIRVTERRAA*
Ga0075314_100247333300014265Natural And Restored WetlandsVSPGWLTRIETVGTTMVVLMIGAMMIWNEAVERERRLAFTLGCAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVALVTGLVIGTAHWVALRVWIGLGERRPG*
Ga0075316_102146513300014314Natural And Restored WetlandsIGAMMIWNEAVERERRLAFTLGCAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVALVTGLGIGTAHWGALRVWIGLGERRPG*
Ga0190266_1047807713300017965SoilVSPGWLTRIETVGTTLVVLMIGAMMIWNEAVERERRLAFTLGSAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGL
Ga0184626_1043540013300018053Groundwater SedimentMRPGWLSRIETLGTTAVVLMVGSMMLWYEAVQRDRRLVFTIGSAVLFYVVALVLFGRRSAPARIAWWPFAFAGLATGAVAELINAKFLVTREMFVAAATGVVI
Ga0184623_1048027513300018056Groundwater SedimentMRPDWLSRIETLGTTAVVLMVGSMMIWYQAVERNRRLVFTIGSAVVFYVVALVLFGRRSAPARIAWWPFAFAGLATGAVAELSNARFLVTRELFVAAATGVVIGMAHWAALRVWVGLT
Ga0184615_1001912123300018059Groundwater SedimentMRPSWLTRIETLGTTIVVLMVGSMMLWYEAIEREHRLAVTIGSAVLLYVVALVVFGRRSEPSRIAWWPFAFAGLATGAMAELINAKFLVTRELFVAAATGVVIGTAHWAALRVWIRLTERRAA
Ga0184637_1023712823300018063Groundwater SedimentMRPGWLSRIETLGTTAVVLMVGSMMMWYEAVERDRRLVLTIGSAVLFYVVALVLFGRRSAPARITWWPFAFAGLATGAVAELINAKFLVTREMFVAAATGVVIGTAHWAALRAWVRLTERRAV
Ga0184632_1042123113300018075Groundwater SedimentMRPAWLSRIETFGTTAVVLMVGSMMIWYEAVERERRFALTIGSAVFLYVVALVVFGRRSEPSRIAWWPFAFAGLVTGAVSELINARFLVTRELFVAAITGVVIGTAHWAA
Ga0184609_1029566623300018076Groundwater SedimentWLSRIETLGTTAVVLMVGSMMLWYEAVQRDRRLVFTIGSAVLFYVVALVLFGRRSAPARIAWWPFAFAGLATGAVAELINARFLVTREMFVAAATGVVIGTAHWAALRAWIRLTERRVV
Ga0184609_1051355113300018076Groundwater SedimentTTAVVLMVGSMMIWYEAVERERRFALTIGSAVFLYVVALVVFGRRSEPSRIAWWPFAFAGLVTGAVSELINARFLVTRELFVAAITGVVIGMAHWAALRVWIRLTERRAA
Ga0184612_1001166843300018078Groundwater SedimentMRPDWLSRIETLGTTAVVLMVGSMMLWYEAVQRDRRLVFTIGSAVLFYVVALVLFGRRSAPARIAWWPFAFAGLATGAVAELINAKFLVTREMFVAAATGVVIGTAHWAALRAWIRLTEHRVV
Ga0190265_10000703253300018422SoilMGAVPLRHGGAGGRPARPFWLSRIETLGTTVVVLMVACMMIWQEAVIRERRLVVTLASAVVLYGCALVGFGNRSAADRIAWWPFALAGLATGTVAELINAKFLVTRELFVALVTGVVVGTAHWAALRIWIGWSSRTGNTS
Ga0190265_1005708913300018422SoilMRPDWLARIETLGTTAVVLMVGSMMLWYEAVERGRRLGFTIGSAVVFYVGALVVFGWHSAPARIAWWPFAFAGLATGVIAELINARFLVTPEMFVAAATGVVIGTAHWAALRVWVRLTERRAV
Ga0190265_1008221033300018422SoilVTSPPWLARIETLGTTVVVLMVGGMMIWYEAVDRGQRLVVTVGSAILLYLVLLLLLARRSDPGRVAWWPFAVTGLITAAVAELINAKFLVTVELWLAAVTGVAVGTAHWAALRVWIGLSE
Ga0190265_1009618333300018422SoilMREDGTRGPGWLTRIETLGTTVVVALVGSMMLWYEAVQPERRLAVTIGSAVLLYVAALAGFGWRSAASHIAWWPFAAAGSLSGAASELIHASFLVTRELFVAAVTGVVIGTAHWAALRVWIGLSGNRAT
Ga0190265_1034342023300018422SoilMRPDWIFRIETLGTTTVVLLVGSMMIWYEAVEREGRLAIVIGSAVLLYVVTLVVFGWRSEPSRIAWWPFALAGLLTGAVSELINAKFLVTRELFIAAVTGLVIGTAHWAALRVWIGLIERRAA
Ga0190265_1039841323300018422SoilMRHHWVSRIQTLGTTAVVLMVGSMMLWYEAVERGRRLAFTIGSAVLLYVLVLVLLGLRSAPARIAWWPFACAGLATGAVAELSNARFLVTREMFVAAATGVVIGTAHWAALRVWVRLTERRAVQ
Ga0190265_1117371123300018422SoilGERRDARGWGVRPGWLFRIEMLGTTAVVLMVGSMMIWYESVERERRLALTIGSAVVLYAVALMVFGRRSAPSRVAWWPFALAGLATGAVAELINAKFLVTRELFVAAITGLVIGTAHWAALRVWIGLVEQRRGT
Ga0190265_1120513723300018422SoilMTPGWLPRIETLATTVVVLMVGSMMIWYEAVERERRLVLTIGSAVFLYAVALVVFGRRSEPSRIAWWPFALAGLATGAVSELINAKFLVTRELFVAAVTGAVIGTAHWAALRVWIGLTGRRAA
Ga0190265_1235879723300018422SoilTTIVVLLVGSMMIWYEAVEREQRLVVTIGAAALLYVGALVGFGWRSTASRIAWWPFAAAGFLSGAVSALINASFLITVELFVAAVTGVVIGTAHWTALRVWIGLTDNRAT
Ga0190272_1230490013300018429SoilMRHHWVLRIQTLGTTAVVLMVGSMMLWYEAVERGRPLGFTIGSAVVFYVVALVVFGWHSAPARIAWWPFAFAGLATGVIAELINARFLVTREMFVAAATGLVIGTAHWVA
Ga0190270_1010318353300018469SoilVGTTLVVLMIGAMMIWNEAVERERRLAFTLGCAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPG
Ga0190274_1004018453300018476SoilVGTTLVVLMIGAMMIWNEAVEQERRLAFTLGCAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINAQFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGDRRPG
Ga0190264_1056965223300019377SoilMKPDWLARIETLGTTAVVLMVGSMMLWYEAVERGRPLGFTIGSAVVFYVVALVVFGWHSAPARIAWWPFACAGLATGAVAELSNARFLVTREMFVAAATGVVIGTAHWAALRVWVRLTERRAVQ
Ga0190264_1109019723300019377SoilMRPGWLTRIEMLGTTIVVLMVGSMMIWHEAAARERLLVLTIGSAVVLYVLALVVLGRRSEPSRIAWRPFAFAGLVTGAIAELINARFLVTRELFLAAATGVVIGTAHWAALRVWIRLTERRLEAQAK
Ga0187893_1003257533300019487Microbial Mat On RocksMRPDWLSRIEMLGTTIVVLMVGSMMIWFEAVERERRLVLTIGSAVILYVAALVVFGRRSEPSRIAWWPFAIAGLVTGAVSELINAKFMVTRELFVAAFTGTVIGTAHWAALGLWIRLTGHRSP
Ga0210378_1001841753300021073Groundwater SedimentMRPDWLSRIETLATTAVVLMVGSMMIWYEAAERGRWLRVTIGSAVLFYVAALVLFGWRSAPARIAWWPFALAGLATGAVAELINARFLVTREMFVAAATGVVIGTAHWAALRVLIRVSERRAV
Ga0210378_1022061513300021073Groundwater SedimentMRPAWLSRIETFGTTTVVLMVGSMMIWYEAVERERRFALTIGSAVFLYVVALVVFGRRSEPSRIAWWPFAFAGLVTGAVSELINARFLVTRELFVAAITGVVIGTAHWAALRVWIRLTERRAA
Ga0210377_1011159233300021090Groundwater SedimentMRPSWLTRIETLGTTIVVLMVGSMMLWYEAIEREHRLAVTIGSAVLLYVVALVVFGRRSEPSRIAWWPFAFAGLASGAMAELINAKFLVTRELFVAAATGVVIGTAHWAALRVWIRLTERRTA
Ga0196959_1002973023300021184SoilVSPAWLRRIETLGTTVVVLMVGAMMLWYEALERERRLAVTIGSAVVLYVAVLVLCGRRSQPDRIAWWPFAAAGVMTGGVAELINARLLVTDELFVAMVTGMVVGTAHWTALRVWIGLGRGETG
Ga0209640_1002275643300025324SoilMRPSWLARIETLGTTIVVLMVGSMMLWYEAIEREHRLAVTIGSAVLLYVVALVVFGRRSEPSRIAWWPFAFAGLASGAMAELINAKFLVTRELFVAAATGVVIGTAHWAALRVWIRLTERRAA
Ga0210087_103680023300025559Natural And Restored WetlandsGELLPLGSVPVSPGWLTRIETVGTTMVVLMIGAMMIWNEAVERERRLAFTLGCAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVALVTGLGIGTAHWGALRVWIGLGERRPG
Ga0210076_100559123300025567Natural And Restored WetlandsVSPGWLTRIETVGTTMVVLMIGAMMIWNEAVERERRLAFTLGCAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVALVTGLGIGTAHWGALRVWIGLGERRPG
Ga0210113_112448823300025796Natural And Restored WetlandsTRIETVGTTMVVLMIGAMMIWNEAVERERRLAFTLGCAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVALVTGLGIGTAHWGALRVWIGLGERRPG
Ga0209842_109250813300027379Groundwater SandMRPDWLSRIETLGTTAVVLMVGSMMIWYEAVERDRRLVLTIGSAVLFYVVALVLFGRRSAPGRIAWWPFAFAGLATGAVAELINAKFLVTPEMFVAAATVTPAARSRLTGVSPRRTFRVSRRPMR
Ga0214468_118224123300027647SoilMREGRTTAPDWLTRIETLGTTIVVLLVGGMMIWYEAVERERGLVVTIGIAVLLYAVALAGFGWRSAASHIAWWPFAAAGLLSGAVSELINASFLVTRELFVAAVTGV
Ga0209485_119180623300027691Agricultural SoilMGDLVARPPGPRWLWRIEMLSTTVVVVMIGSMMLWYESIERERRLLVTIGSAVVLYVAGLVISGQKSDPSRVSWWPFALAGLIAGAVAELINAQFLVTRELLAAVVAGVVIGTAHWIALRVWLHFTGSGAVSPP
Ga0209382_1058648633300027909Populus RhizosphereVSPGWLTRIETVGTTVVVLMVGAMMIWNEAVERERRLAFTLGCAVLVYVAVLVIAARRSARGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGVGERRPG
Ga0247828_1055544623300028587SoilVSPGWLTRIETVGTTLVVLMIGAMMIWNEAVERERRLAFTLGSAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPG
Ga0247818_1041029613300028589SoilIETVGTTLVVLMIGAMMIWNEAVERERRLAFTLASAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPG
Ga0247823_1153131823300028590SoilVSPGWLTRIETVGTTLVVLMIGAMMIWNEAVERERRLAFTLASAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPG
Ga0247822_1048748333300028592SoilVSPGWLTRIETVGTTLVVLMIGAMMIWNEAVERERRLAFTLGSAALVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPG
Ga0247820_1001493173300028597SoilVGTTLVVLMIGAMMIWNEAVERERRLAFTLASAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPG
Ga0247819_1092626913300028608SoilHERTHQGQRKVRPSLEGDRWPVAGELLPVGPLPVSPGWLTRIETVGTTLVVLMIGAMMIWNEAVERERRLAFTLASAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPG
Ga0307318_1023467513300028744SoilVSPGWLTRIETVGTTVVVLMIGAMMIWNEAVERERRLAFTLGCAVLVYVTVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPG
Ga0247825_1002589433300028812SoilVGTTLVVLMIGAMMIWNEAVERERRLAFTLGSAALVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPG
Ga0247825_1060047213300028812SoilVSPGWLTRIETVGTTLVVLMIGAMMIWNEAVERERRLAFTLGSAVLVYVTVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPG
Ga0307314_1011289833300028872SoilVPRPQPPVWLSRIEMLGTTLTVLIIGSMMIWYEAIAREARVAVTIGSGVILYVVGLGVFGLRSDPNRIAWWPFALAGLAAGAAAELVNAEFVVTRELFLAGVTGGVIGTAQWTALRVWIH
Ga0299907_1012466533300030006SoilMREGRTTAPDWLTRIETLGTTIVVLLVGGMMIWYEAVERERGLVVTIGIAVLLYAVALAGFGWRSAASHIAWWPFAAAGLLSGAVSELINASFLVTRELFVAAVTGVVIGTAHWVALRVWIALTGPRPT
Ga0299907_1052889223300030006SoilMRPHWLSRIETLGTTTVVLMVGSMMIWYEAVERERRLALTIGSAIFLYVVALVVFGRRSEPSRIAWWPFAFAGLVTGAVSELINAKFLVTRELLVAAITGVVIGTAHWTALRVWIGLTGRRAA
Ga0299907_1091982013300030006SoilMRPDWLSRIETLGTTIVVLLVGSMMIWYESAERGRRLVLTIGSAVVLYVVVLMVLGRRSEPSRIAWWPFAFAGLATGAIAELINARFLVTRELFVAAATGVVIGMA
Ga0299906_1006661733300030606SoilMRPDWLSRIETLGTTAVVLMVGSMMIWYEAVERGRRLAFTIGSAVLFYVAALALFGWRSAPARIAWWPFASAGLATGVVAELINARFLVTREMFVAAATGV
Ga0299906_1110808613300030606SoilMRPDWLSRIETLGTTAVVLMVGSMMIWYEAVERDRRLAFTIGSAVSLYVVALALFGWRSAAARIAWWPFAVAGLATGAIAELINAKFLVTREMFVAAVTGVVIGTAHWAALRVWIRLSERRTV
Ga0268386_1078200023300030619SoilMRPDWLSRIETLGTTAVVLMVGSMMIWYEAVERDRRLAFTIGSAVLLYVVALALFGWRSAPARIAWWPFAVAGLVTGAIAELINAKFLVTREMFVAAATGVVIGSAHWAALRVWIRLSDRRTM
Ga0302046_1008389723300030620SoilMRPGWLSRIETLGTTAVVLMVGSMMIWYEAVERGRRLAFTIGSAVLFYVAALALFGWRSAPARIAWWPFASAGLATGVVAELINARFLVTREMFVAAATGVAIGTAHWAALRVWIRLTERRAV
Ga0302046_1016771613300030620SoilTAVVLMVGSMMIWYEAVERDRRLAFTIGSAVSLYVVALALFGWRSAAARIAWWPFAVAGLATGAIAELINAKFLVTREMFVAAVTGVVIGTAHWAALRVWIRLSERRTV
Ga0299913_1002686053300031229SoilMREGRTTAPDWLTRIETLGTTIVVLLVGGMMIWYEAVERERGLVVTIGIAVLLYAVALAGFGWRSAVSHIAWWPFAAAGLLSGAVSELINASFLVTRELFVAAVTGVVIGTAHWVALRVWIALTGPRPT
Ga0299913_1004268933300031229SoilMSPSWLSRIETVGTTVIVLMVGGMMIWYEAVERAPRLAGTIGIAVLLYVAVLVLAGRRSAPGRIPWWPFAAAGLVTGAVAELINARFLVTRELFLAAVTGLVIGTAQWAALRVWIRLGERPGTGESA
Ga0299913_1017908923300031229SoilMRPHWLSRIETLGTTTVVLMVGSMMIWYEAVERERRLALTIGSAIFLYVVALVVFGRRSEPSRIAWRPFAFAGLVTGAVSELINAKFLVTRELLVAAITGVVIGTAHWVALRVWIGLTGRRAA
Ga0307410_1048523513300031852RhizosphereMREDGTTGPGWLTRIETLGTTIVVLMVGGMMVWYEAVQRERRLIVTIGAALLLYSAALAGFGWRSAASHIAWWPFAAAGFLSGAVSELINASFLVTRELFVAGVTGVVIGTA
Ga0310892_1078388523300031858SoilVSPGWLTRIETVGTTLVVLMIGAMMIWNEAVERERRLAFTLGCAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPG
Ga0307407_1025327133300031903RhizosphereMREDGTTGPGWLTRIETLGTTIAVLMVGGMMVWYEAVQRERRLIVTIGAALLLYSAALAGFGWRSAASHIAWWPFAAAGFLSGAVSELINASFLVTRELFVAGVTGVVIGTAHWIALRVWIGLTEKHAT
Ga0307409_10005098133300031995RhizosphereMREDGTTGPGWLTRIETLGTTIVVLMVGGMMVWYEAVQRERRLIVTIGAALLLYSAALAGFGWRSAASHIAWWPFVAAGFLSGAVSELINASFLVTRELFVAGVTGVVIGTAHWIALRVWIGLTEKHAT
Ga0307409_10171902623300031995RhizosphereVRENQIVGPGWLRRIETFGTTAIVLMVGAMMIWFEAVERGRRLAVTIACAVFLYLGVLVVSGRRSSPAGIPWWPFAAAGLVTGGVAELINARFLVTVELLAAVVTGLVIGTAHWLALRVWIGLGARRTG
Ga0307416_10044942233300032002RhizosphereMREDGTTGPGWLTRIETLGTTIVVLMVGGMMVWYEAVQRERRLIVTIGAALLLYSAALAGFGWRSAASHIAWWPFAAAGFLSGAVSELINASFLVTRELFVAGVTGVVIGTAHWIALRVWIGLTEKHAT
Ga0307416_10284756323300032002RhizosphereMSQRWMTRIETLGTTMVVLMIGSMTIWYQAVARDRRLAVTIGCAVVLYIAVLVFCGRRSESGVIPWWPFAAAGVVTGAVAELIDARFLVTVELLVAVVTGLVIGTAHWGALRVWIRMRRAGPAST
Ga0310902_1086007423300032012SoilVSPGWLTRIETVGTTLVVLMIGAMMIWNEAVERERRLAFTLASAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWI
Ga0310906_1009602823300032013SoilVSPGWLTRIETVGTTLVVLMIGAMMIWNEAVERERRLAFTLGSAALVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINAQFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPG
Ga0310890_1009213023300032075SoilVSPGWLTRIETVGTTVVVLMVGAMMIWNEAVERERRLAFTLGCAVLVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWVALRVWIGLGERRPG
Ga0307415_10225270413300032126RhizosphereRTHQGEREVRSPLAADRRTVAGELPPMGAVPMSQRWMTRIETLGTTMVVLMIGSMTIWYQAVARDRRLAVTIGCAVVLYIAVLVFCGRRSESGVIPWWPFAAAGVVTGAVAELIDARFLVTVELLVAVVTGLVIGTAHWGALRVWIRMRRAGPAST
Ga0315910_1004593923300032144SoilVTRGWLGRIETLGTTVVVLMIGAMMIWFEAVERERWLVVTIGCAVLAYVAVLVLAGRRSEAGGIPWWPFASAGVVTGGVAELLNARFLVTIELLAAVVTGLVIGTAHWVAVRVWIGLGERPPG
Ga0214471_1027547933300033417SoilMRPDWLSRIETLGTTIVVLMVGSMMIWYEAAERERRLAFTIGSAVLLYVVALVVFGRRSEPSRIAWWPFAFAGLTTGAIAELINAKFLVTRESFVAAATGVVIGTAHWAALRVWIRLSARRAG
Ga0247829_1058725613300033550SoilVGTTLVVLMIGAMMIWNEAVERERRLAFTLGSAALVYVAVLVIAARRSAPGSIPWWPFAAAGVLTGGVAELINARFLVTIELLVAVVTGLVIGTAHWV
Ga0364940_0081345_401_7723300034164SedimentMTPSWLTRIETLGTTIVVLMVGSMMLWFEAVERERRLAVTIGSAVVLYVAALVLFGRRSEPSRIAWWPFAVAGLVTGAVAELINAKFLVTRELFVAAVTGVAIGTAHWAALRVWIRVTERRAA
Ga0364942_0004596_3779_41293300034165SedimentMRPSWLTRIETLGTTIVVLMVGSMMLWYEAIEREHRLAVTIGSAVLLYVVALVVFGRRSEPSRIAWWPFAFAGLATGAMAELINAKFLVTRELFVAAATGVVIGTAHWAALRVWIRL
Ga0364932_0145551_514_8853300034177SedimentMRPSWLTRIETLGTTIVVLMVGSMMLWYEAIEREHRLAVTIGSAVLLYVVALVVFGRRSEPSRIAWWPFAFAGLATGAMAELINAKFLVTRELFVAAATGVVIGTAHWAALRVWIRLSARRAG
Ga0364934_0151527_111_4823300034178SedimentMRPSWLTRIETLGTTIVVLMVGSMMLWYEAIEREHRLAVTIGSAVFLYVVALVVFGRRSEPSRIAWWPFAFAGLATGAMAELINAKFLVTRELFVAAATGVVIGTAHWAALRVWIRLTDRRAA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.