Metagenome Family F093453

Overview

Basic Information

• Family ID: F093453
• Family Type: Metagenome
• Number of Sequences: 106
• Average Sequence Length: 64 residues
• Representative Sequence: LYAASLSYPIIPSEIPDLFNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVVYLYPDVKTK
• Number of Associated Samples: 94
• Number of Associated Scaffolds: 106

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 0.00 %
• % of genes from short scaffolds (< 2000 bps): 0.00 %
• Associated GOLD sequencing projects: 85
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (99.057 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (32.075 % of family members)
• Environment Ontology (ENVO): Unclassified (44.340 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (42.453 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 34.78%
  β-sheet: 0.00%
  Coil/Unstructured: 65.22%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00903	Glyoxalase	22.64
PF14356	DUF4403	14.15
PF13374	TPR_10	0.94
PF01541	GIY-YIG	0.94
PF00165	HTH_AraC	0.94
PF00171	Aldedh	0.94
PF04138	GtrA	0.94
PF12833	HTH_18	0.94
PF05746	DALR_1	0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.94
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.94
COG0751	Glycyl-tRNA synthetase, beta subunit	Translation, ribosomal structure and biogenesis [J]	0.94
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.94
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.94

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.06 %
All Organisms	root	All Organisms	0.94 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.06 %
cellular organisms	root	All Organisms → cellular organisms	0.94 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.06 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.94 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.06 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.94 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.06 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.94 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.06 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.94 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300021415|Ga0193694_1000001	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1862607

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.98%
Host-Associated	Host-Associated	33.02%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.43%
Plants	Host-Associated → Plants	33.02%
Aquatic	Environmental → Aquatic	7.55%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.15%
Sediment	Environmental → Aquatic → Sediment	6.60%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.89%
Freshwater	Environmental → Aquatic → Freshwater	0.94%
Floodplain	Environmental → Terrestrial → Floodplain	0.94%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.32%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.60%
Loam	Environmental → Terrestrial → Soil → Loam	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.83%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.89%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.94%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.94%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	13.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.60%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.94%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	32.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	9.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.66%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.66%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.83%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.94%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.94%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental
3300006931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)	Host-Associated
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental
3300015372	Soil combined assembly	Host-Associated
3300015374	Col-0 rhizosphere combined assembly	Host-Associated
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental
3300022894	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L049-202B-5	Environmental
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental
3300022904	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L166-409R-6	Environmental
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental
3300023062	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S081-202R-4	Environmental
3300023069	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5	Environmental
3300023168	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5	Environmental
3300023260	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S197-509C-6	Environmental
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1026988382	3300000559	Soil	MQTRCILYATSLPYPIVPSENPALFNVPVKFTFYFDQPNTKTVIALAVFIQLQEALTAKVIHLNEGSKKK*
Ga0062590_1005826062	3300004157	Soil	LYAASLPYPIIPSEIPALFNVPVKFTFYFDQPNTKTVIALAVFIQLQEALAAKVIYLHPDVKVK*
Ga0062591_1006850092	3300004643	Soil	MQTRCILYAASLPYPIIPSEIPALFNVPVKFTFYFDQPNTKTVIALAVFIQLQEALAAKVIYLHPDVKVK*
Ga0065712_100588131	3300005290	Miscanthus Rhizosphere	MYFVRCLVIVSNHPSEIPDLLNIPVKFTFYFDQSNTKTVIALAVFIQLQEAMEAKVVYLHPDVKTK*
Ga0065715_100742901	3300005293	Miscanthus Rhizosphere	CILYAASLSYPIILSEIPDLFNIPVKFTFFLEQPNTQTVIALAVFIQLQEAMEAKVVYLHPDVKTK*
Ga0065707_104380681	3300005295	Switchgrass Rhizosphere	MESRCILYAALLSYPIIPSEIPDLLNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVVYLHPDVKTK*
Ga0070690_1004478602	3300005330	Switchgrass Rhizosphere	MLFRCILYAASLSYPIILSEIPDLFNIPVKFTFFLEQPNTKTVIALAVFIQLQEAMEAKVIYLHPEIKTK*
Ga0070670_1018262452	3300005331	Switchgrass Rhizosphere	LSEIPDLFNIPVKFTFFLEQPNTQTVIALAVFIQLQEAMEAKVVYLHPDVKTK*
Ga0070677_101387153	3300005333	Miscanthus Rhizosphere	MYFVRCLVIVSNHPSEIPDLLNIPVKFTFYFDQSNTKTVIALAVFIQLQEAMEAKVIYLQPDVKAK*
Ga0070669_1007935282	3300005353	Switchgrass Rhizosphere	FRCILYAAPLSYPIIPSEIPDYSIPVKFTFYFDQLNTKTVIVLAVFIQLQEAMEAKVIYLHPEIKTK*
Ga0070674_1017128172	3300005356	Miscanthus Rhizosphere	MYFVRCLVKVSNHPSEIPDLLNILVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVVYLHPDVKTK*
Ga0068853_1009023413	3300005539	Corn Rhizosphere	EMLFRCILYAASLSYPIILSEIPDLFNTPVKFTFFFEQPNTQTVIALAVFIQLQEAMEAKVVYLHPDVKTK*
Ga0070695_1004978001	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MYFVRCLVIVSNHPSEIPDLLNILVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVVYLHPEVKTK*
Ga0068857_1011941742	3300005577	Corn Rhizosphere	VYFVRRFITDPIIPSENPALFNIPVKFTFYFDQPNTKTVIALAVFIQLQETLTAKVIYLDPEKIK*
Ga0068859_1001715015	3300005617	Switchgrass Rhizosphere	MYFVRGFTIYPIIPSEIPDLFNIPVKFTFYFDQPNTKTVIALAVFFQLQEAMKAKVVYLHPDVKTK*
Ga0068864_1002218524	3300005618	Switchgrass Rhizosphere	MYFVRGLTIYPIIPSEIPDLFNIPVKFTFYFDQPNTKTVIALAVFIQLQETLTAKVIYLDPEKIK*
Ga0068863_10000307217	3300005841	Switchgrass Rhizosphere	LYAASLSYPIIPSEIPDLFNIPVKFTFYLDQPNTKTVIALAVFIQLQEAMEAKVIYLNPEIKTK*
Ga0068858_1009322742	3300005842	Switchgrass Rhizosphere	MESRCILYAASLSYPIILSEIPDLFNIPVKFTFFLEQPNTQTVIALAVFIQLQEAMEAKVVYLHPDVKTK*
Ga0068860_1024153491	3300005843	Switchgrass Rhizosphere	MLFRCILYAASLSYPIILSEIPDLFNIPVKFTFFLEQPNTKTVIALAVFIQLQEAMEAKVIYLQPDVKTK*
Ga0075428_1016266582	3300006844	Populus Rhizosphere	MESRCILYAASLSYPIIPSEIPELFNIPVKFTFYFDQPNTKTVIALAVFIKLQEAMEAKVVYLHPDVKTK*
Ga0075420_1014396342	3300006853	Populus Rhizosphere	MESRCILYAASLSYPVIPSEIPDLFNIPVKFTFYFDQPNTKTVIALAVFIKLQEAMEAEVVYLHPDVKTK*
Ga0079215_106083482	3300006894	Agricultural Soil	MPSEIPDLFNIPVKFTFYFDQPNTKTVIALAVFLQLQEAMEAKVVYLHPDVKAK*
Ga0097620_1012931911	3300006931	Switchgrass Rhizosphere	MQTGCILYAASLSYPIIPSEIPAVFNVPVKFTFYFDQPNTKTVIALAVFIQLQE
Ga0111539_107409251	3300009094	Populus Rhizosphere	LYAVPLTYPIIPSAIPDLFNIPVKFTFYFDQPNTKTVIALAVFIQLQE
Ga0075418_114763892	3300009100	Populus Rhizosphere	LYAASLSYPIIPSEIPELFNIPVKFTFYFDQPNTKTVIVLAVFIHLQEAMEAKIIYMHPDVKTK*
Ga0075423_121087991	3300009162	Populus Rhizosphere	MLFRCILYAASLSYPIILSEIPDLFNIPVKFTFFLEQPNTQTVIALAVY
Ga0105249_109531782	3300009553	Switchgrass Rhizosphere	VYFVRHFITVSDHPSENPALFNIRVKFTFYFDQPNTKTVIALAVFIQLQEALTAKVIYLDPEKIK*
Ga0134062_104275792	3300010337	Grasslands Soil	PSEILLFNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVICFNENKKQE*
Ga0134122_110890252	3300010400	Terrestrial Soil	LYAASLSYPIIPFEIPDLFNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVVYLHPDVKQ
Ga0105246_110922861	3300011119	Miscanthus Rhizosphere	MLFRCILYAASLSYPIILSEIPDLFNIPVKFTFFLEQPNTKTVIALAVFIQLQESMT
Ga0137451_11309132	3300011438	Soil	MKVGNKFFNKPVILRLQKIQAGCILYAASLSYPIIPSEIPDLFNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVVYLYPDVTTK*
Ga0137437_12858781	3300011442	Soil	LYAASLSYPIIPSEIPDLFNIPVKFTFFLEQPNTKTVIALAVFIQLQEAMEAKVIYLHPDVKTK*
Ga0157287_10421962	3300012885	Soil	LYAASLSYPIIPSEIPDLFNIPVKFTFYFDQPNTKTVIALIVFIQLQEAMEAKVVNLHPDVKTK*
Ga0157294_101032181	3300012892	Soil	MPSEIPDLFNIPVKFTFYFDQPNTKTVIALVVFIQLQEAMEAKVICLQPEVKAK*
Ga0157284_101072001	3300012893	Soil	MAGCILYAASLSYPIIPSEIPDLFNIPVKFTFYFDQPNTKTVIALAVFIQLQDAMEAKVVYLNPDVKTK*
Ga0157303_100328832	3300012896	Soil	MQTRCILYAASLPYPIIPSEIPALFNVPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVVYLYPEIKTK*
Ga0157299_100442342	3300012899	Soil	LYAASLSYPIIPSEIPVLFNIPVKFTFYFDQPNTKTVIALIVFIQLQEAMEAKVVNLHPDIKTK*
Ga0157299_101551641	3300012899	Soil	NLRVGCILFAASLPYPIIPSEIPDLFNIQLKFTFYFDQPNTKTVIALAVFIQLQEIMEAKVVYLHPDIKTK*
Ga0157289_100941561	3300012903	Soil	LYVASLSYPIIPSEIPDPFNIPVKFTFYFEQPNTKTVIALAVFIQLQEAMEAKVVYLHPNVKTK*
Ga0157282_103943632	3300012904	Soil	LYAASISYPIIPSEIPDLSNIPVKFTIFLEQPNTKTVIALAVFIQLQETMEAKVVYLHPDVKTK*
Ga0157286_100048671	3300012908	Soil	LYAASLPYPIIPSEIPALFNVPVKFTFYFDQPNTKTVIALAVFIQLQEALAAKVI
Ga0157286_100503633	3300012908	Soil	LYAASISYPIIPSEIPDLFNIPVKFTFYFDQPNTKTVIALAVFIQLQEALAAKVIYLHPDVKVK*
Ga0157306_103378171	3300012912	Soil	PSEIPDLFNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVVYLQPDNKTK*
Ga0157297_105055071	3300012914	Soil	MYFVRCSTIVSGYPSEIPDLFNIPLKFTFYLDQPNTKTVIALAVFIQLQEAMEAKVVYLYPEIKTK
Ga0157302_103075882	3300012915	Soil	LYAASLSYPIIPSEIPDLSNIPVKFTIFLEQPKTKTVIALAVFIQLQEAMEAKVVYLYPEIKTK*
Ga0157310_101276291	3300012916	Soil	LFAASLSYPIIPSEIPDIFNIQLKFTFYFDQSNTKTVIALAVFIQLQEAMEAKV
Ga0157310_102419282	3300012916	Soil	LYAASLLYPIIPSEIPDLFNILVKFTFYFDQPNTKIVIALIVFIQLQEAMEAKVVNLHPDVKTK*
Ga0164298_102816922	3300012955	Soil	LFAASLFHPRIPSEIPDLFNIQLKFTFYFDQSNTKTVIALAVFIQLQEALEAKVIYLQPDVKAK*
Ga0157307_11261611	3300013096	Soil	LYAASISYPIIPSEIPDLSNIPVKFTIFLEQPNTKTVIALAVFIQLQEAMEAKVVYLYPEIKTK*
Ga0163162_121268122	3300013306	Switchgrass Rhizosphere	NKSVILRLQKIRTECILYAAPLSYPIIPSEIPDLFNIAMKFTFFLEQLNTKTVIALAVFIQLQEAMEAKVIYLHPEIKTK*
Ga0157375_131629871	3300013308	Miscanthus Rhizosphere	LFAASLTYPIIPSEIPDRFNILVKFTFYFDQPNTKTVIALAVFFQLQEAMEAKVIYLQPNVKAK*
Ga0157380_109358933	3300014326	Switchgrass Rhizosphere	IPSEIPDLFNIPVKFTFYFDQPNTKTVIALALFIQLQEAMEAKVVYLNPDVKTK*
Ga0157377_104160522	3300014745	Miscanthus Rhizosphere	MQTGCILYAASLSYPIIPSEIPAVYNVPVKFTFYFDQPNTKTVIALAVFIQLQEAL
Ga0173483_105531401	3300015077	Soil	LYAASLSYPIIPSEIPDLSNIPVKFTIFLEQPNTKTVIALAVFIQLQEAMEAKVVYLYPEIKTK*
Ga0173480_106023133	3300015200	Soil	LYVASLSYPIIPSEIPDLSNIPVKFTIFLEQPNTKTVIALAVFIQLQEAMEAKVIYLQPDVKAK*
Ga0173480_106217422	3300015200	Soil	LYAASLSYPTIPSEIPELFNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVIYLQADVKAK*
Ga0173478_100743032	3300015201	Soil	LYAASLPYPIIPSEIPALFNVPVKFTFYFDQPNTKTVIALIVFIQLQEAMEAKVVNLHPDIKTK*
Ga0173478_102614561	3300015201	Soil	NLRVGCILFAASLPYPIIPSEIPDLFNIQLKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVIYLQPDVKAK*
Ga0173478_103568921	3300015201	Soil	LYAASLQYPTIPSEIPDLSNIPVKFTIFLEQPNTKTVIALAVFIQLQEVMEAKVVYLHPDVKTK*
Ga0132256_1025598702	3300015372	Arabidopsis Rhizosphere	LYAASLSYPTIPSEIPDLFNIQLKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVVYLHLEVKTK*
Ga0132255_1032613711	3300015374	Arabidopsis Rhizosphere	LFAASLFHPRIPSEIPDLFNIQLKFTFYFDQSNTKTVIALAVFIQLQEAMEAKIIY
Ga0184634_104918082	3300018031	Groundwater Sediment	MLFRCILYAASLSYPIILSEIPDLFNIPVKFTFYFDRPNTKTVIALALFIQLQEAMEAKVVYLNPDVK
Ga0184611_11140272	3300018067	Groundwater Sediment	MYFVRCLVIVSNHPSEIPDLLNIPVKFTFYFDQSNTKTVIALAVFIQLQEAMEAKVVYLHPDVKTK
Ga0184635_100802583	3300018072	Groundwater Sediment	MYFVRCFTIVSNHSSKILELFNITVKFTFYFDRPNTKTVIALAVFIQLQEAMEAKVIYLQADVKAK
Ga0184625_1000029311	3300018081	Groundwater Sediment	LYAASLSYPIIPSEIPDLFNIPVKFTFYFDQPNTKTVIALALFIQLQEAMEAKVVYLNPDVKTK
Ga0184628_103533131	3300018083	Groundwater Sediment	LYAVSLSYPIIPPEIPDLFNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVVYLHPDVKTK
Ga0190274_100066475	3300018476	Soil	MYFVRCFTIVSNIPSEIPELSNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVVYLQPDVKTK
Ga0190274_102481103	3300018476	Soil	MYFVRCLTIVSNYPSEIPDLFNTLVKFTFYFDQSNTKTVIALAVFIQLQEAMEAKVIYLQPDVKAK
Ga0190274_115875382	3300018476	Soil	MLFRCILYAASLSYPIILSEIPDLFNIPVKFTFFLEQPNTKTVIALAVFIQLQEAME
Ga0190274_132150511	3300018476	Soil	LYAASLSYPIIPSEIPDLFNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKV
Ga0190271_116347971	3300018481	Soil	MESRCILYATSLSYPIIPSEIPDLFNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEA
Ga0173482_101543022	3300019361	Soil	LYAASISYPIIPSEIPDLSNIPVKFTIFLEQPNTKTVIALAVFIQLQETMEAKVVYLHPDVKTK
Ga0173482_104547901	3300019361	Soil	YPIILSEIPDLFNIPVKFTFFLEQPNTKTVIALAVFIQLQEAMEAKVVYLHPDVKTK
Ga0173479_100580982	3300019362	Soil	LYAASLSYPIIPSEIPVLFNIPVKFTFYFDQPNTKTVIALIVFIQLQEAMEAKVVNLHPDIKTK
Ga0193741_10418472	3300019884	Soil	MKSRCILYATSLSYPIIPTEIPDPFDIPVKFTFYFDQPNTKTVIALAVFIQLQEIMEAKVVYLHPDIKTK
Ga0210380_100683842	3300021082	Groundwater Sediment	LYAASLTYPIIPSEIPDLFNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVVYLNPDVKTK
Ga0193694_1000001791	3300021415	Soil	LYAASLSYPIIPSEIPDLFNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVVYLYPDVKTK
Ga0247746_10300782	3300022886	Soil	LYAASLSYPIIPPEIPDPFNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVIYLQPDVKAK
Ga0247746_11813022	3300022886	Soil	LYAASLQYPTIPSEIPDLSNIPVKFTIFLEQPNTKTVIALAVFIQLQEVMEAKVVYLHPDVKTK
Ga0247778_11911051	3300022894	Plant Litter	MLCRCILYAASLQYPTIPSEIPDLSNIPVKFTIFLEQPNTKTVIALAVFIQLQEAMEAKVIYLQPDVKAK
Ga0247795_10621081	3300022899	Soil	MQTRCILYAASLPYPIIPSEIPALFNVPVKFTFYFDQPNTKTVIALAVFIQ
Ga0247788_10991462	3300022901	Soil	MAGCILYAASLSYPIIPSEIPDLFNTLVKFTFYFDQSNTKTVIALAVFIQLQEAMEAKVVCLHPDVKTK
Ga0247769_11598322	3300022904	Plant Litter	MLSRCILYAASLSYPIIPSEIPDLSNIPVKFTIFLEQPNTKTGIALAVFIQLQEAMEAKVIYLQPDVKAK
Ga0247790_101119792	3300022915	Soil	LYAASLSYPIIPSEIPDLFNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKIVYLHPDVKTK
Ga0247791_10057904	3300023062	Soil	LYAASLSYPIIPSEIPDLFNIPVKFTFYFDQPNTKTVIALIVFIQLQEAMEAKVVNLHPDIKTK
Ga0247751_10196142	3300023069	Soil	LYAASLSYPIIPSEIPDLFNIPVKFTFYFDQPNTKTVIALVVFIQLQEAMEAKVVYLHPDIKTK
Ga0247748_10320882	3300023168	Soil	LYAASISYPIIPSEIPDLSNIPVKFTIFLEQPNTKTVIALAVFIQLQEVMEAKVVYLHPDVKTK
Ga0247798_10302852	3300023260	Soil	LYAASLSYPIIPSEIPDLSNIPVKFTIFLKQPNTKTVIALAVFIQLQEAMEAKVVYLHPDVKTK
Ga0247794_100056343	3300024055	Soil	MLFRCILYAASLSYPIILSEIPDLFNIPVKFTFFLEQPNTQTVIALAVFIQLQEAMEAKVVYLHPDVKTK
Ga0207682_100692822	3300025893	Miscanthus Rhizosphere	MYFVRCFAIKYPIIPSEIPDLFNIPVKFTFYFDQSNTKTVIALAVFIQLQEAMEAKVIYLQPDVKAK
Ga0207642_101147812	3300025899	Miscanthus Rhizosphere	MYFVRCFTIVSNHSSKIPELFNIPVKFTFFLEQPNTKTVIALAVFIQLQEAMEAKVIYLQTDVKAK
Ga0207644_109049092	3300025931	Switchgrass Rhizosphere	LFAASLTYPIIPSEIPDRFNIPVKFTFYFDQPNTKAVIALAIFIQLQGSMTAKLIHLDKGSKKK
Ga0207669_113175092	3300025937	Miscanthus Rhizosphere	MYFVRCLVKVSNHPSEIPDLLNILVKFTFYFDQPNTKNVIALAVFIQLQETMEAKVVYLHLDVKTK
Ga0207712_106546692	3300025961	Switchgrass Rhizosphere	VYFVRHFITVSDHPSENPALFNIRVKFTFYFDQPNTKTVIALAVFFQLQEAMKAKVVYLHPDVKTK
Ga0207676_111062322	3300026095	Switchgrass Rhizosphere	VYFVRRFITDPIIPSENPALFNIPVKFTFYFDQPNTKTVIALAVFIQLQETLTAKVIYLDPEKIK
Ga0209486_102765283	3300027886	Agricultural Soil	LEEMKPRCILYATSLSYPIIPSEIPDLFNIPVKFTFYFDQPNPKTVIALAVFFQLQEAMEAKVVYLHPDVKAK
Ga0209382_104649242	3300027909	Populus Rhizosphere	LYAASLSYPVIPSEIPDLFNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVVYLHPDVKTK
Ga0268264_102510611	3300028381	Switchgrass Rhizosphere	SLSYPIIPSEIPDLFNIPVKFTFYFDQPNTKTVIALAVFFQLQEAMEAKVIYLQPDVKTK
Ga0310888_103189271	3300031538	Soil	MLSRCILYAGSLSYPLIPSEIPELFDIPMKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVIYLQPDVKAK
Ga0310888_105100862	3300031538	Soil	MLFRCILYAALLSYPIIPSEIPELFNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVIYLQPDVKAK
Ga0310886_109625461	3300031562	Soil	MLFRCILYAALLSYPIIPSEIPELFNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVIYLHPEIKTK
Ga0310904_100958912	3300031854	Soil	LYAALLSYPIIPSEIPELFNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVIYLHPEIKTK
Ga0310895_102047842	3300032122	Soil	LYAALLSYPIIPSEIPDLFNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVIYLHPEIKTK
Ga0310896_100829092	3300032211	Soil	LYAASLSYPIIPSEIPELFNIPVKFTFYFDQPNTKTVIALAVFIQLQEAMEAKVIYLHPEIKTK
Ga0310810_104007531	3300033412	Soil	RLQRIGAGCILYAASLSYPIIPSEIPDLFNIPVKFTFYFDQPNTKTVIALAVFFQLQEAMKAKVVYLHPDVKTK
Ga0364933_180619_327_551	3300034150	Sediment	RLQKIQAGCILYAASLSYPIIPSEIPDLFNIPVKFTFYFDQPNTKTVIALAVFVQLQEAMEAKVVYLYPDVTTK