Basic Information | |
---|---|
Family ID | F093444 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 106 |
Average Sequence Length | 112 residues |
Representative Sequence | MSVTTTWNPMTHTDYDLLQGIEVFSANGEKVGSIAGIFHPNMEMPAARGRHYFLLDPGLIKDWFGGFDQVYLPESAIESVSPDRVVLNLTSEQIKQRGKQWTMEPTGLASYRRI |
Number of Associated Samples | 62 |
Number of Associated Scaffolds | 106 |
Quality Assessment | |
---|---|
Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 56.60 % |
% of genes near scaffold ends (potentially truncated) | 27.36 % |
% of genes from short scaffolds (< 2000 bps) | 96.23 % |
Associated GOLD sequencing projects | 61 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.78 |
Hidden Markov Model |
---|
Powered by Skylign |
Most Common Taxonomy | |
---|---|
Group | Bacteria (93.396 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
---|---|
GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (28.302 % of family members) |
Environment Ontology (ENVO) | Unclassified (33.962 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Unclassified (42.453 % of family members) |
⦗Top⦘ |
⦗Top⦘ |
Predicted Topology & Secondary Structure | |||||
---|---|---|---|---|---|
Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 21.83% β-sheet: 21.13% Coil/Unstructured: 57.04% | Feature Viewer |
|
|||||
Powered by Feature Viewer |
Structure Viewer | |
---|---|
| |
Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.78 |
Powered by PDBe Molstar |
SCOP family | SCOP domain | Representative PDB | TM-score |
---|---|---|---|
b.41.1.1: Photosynthetic reaction centre, H-chain, cytoplasmic domain | d3t6eh2 | 3t6e | 0.63328 |
b.41.1.4: RimM C-terminal domain-like | d2f1la1 | 2f1l | 0.53202 |
b.41.1.2: MTH1895 | d1pm3a1 | 1pm3 | 0.51622 |
b.46.1.2: 3-methyladenine DNA glycosylase (AAG, ANPG, MPG) | d3ubya1 | 3uby | 0.5158 |
b.57.1.0: automated matches | d4v08a_ | 4v08 | 0.51577 |
⦗Top⦘ |
Pfam ID | Name | % Frequency in 106 Family Scaffolds |
---|---|---|
PF00805 | Pentapeptide | 4.72 |
PF00128 | Alpha-amylase | 4.72 |
PF00296 | Bac_luciferase | 2.83 |
PF09939 | DUF2171 | 1.89 |
PF13565 | HTH_32 | 0.94 |
PF13561 | adh_short_C2 | 0.94 |
PF13518 | HTH_28 | 0.94 |
PF03992 | ABM | 0.94 |
PF07929 | PRiA4_ORF3 | 0.94 |
PF00924 | MS_channel | 0.94 |
PF16657 | Malt_amylase_C | 0.94 |
PF02082 | Rrf2 | 0.94 |
COG ID | Name | Functional Category | % Frequency in 106 Family Scaffolds |
---|---|---|---|
COG0296 | 1,4-alpha-glucan branching enzyme | Carbohydrate transport and metabolism [G] | 4.72 |
COG0366 | Glycosidase/amylase (phosphorylase) | Carbohydrate transport and metabolism [G] | 4.72 |
COG1357 | Uncharacterized conserved protein YjbI, contains pentapeptide repeats | Function unknown [S] | 4.72 |
COG1523 | Pullulanase/glycogen debranching enzyme | Carbohydrate transport and metabolism [G] | 4.72 |
COG3280 | Maltooligosyltrehalose synthase | Carbohydrate transport and metabolism [G] | 4.72 |
COG2141 | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) | Coenzyme transport and metabolism [H] | 2.83 |
COG0640 | DNA-binding transcriptional regulator, ArsR family | Transcription [K] | 0.94 |
COG0668 | Small-conductance mechanosensitive channel | Cell wall/membrane/envelope biogenesis [M] | 0.94 |
COG1414 | DNA-binding transcriptional regulator, IclR family | Transcription [K] | 0.94 |
COG1725 | DNA-binding transcriptional regulator YhcF, GntR family | Transcription [K] | 0.94 |
COG1959 | DNA-binding transcriptional regulator, IscR family | Transcription [K] | 0.94 |
COG2186 | DNA-binding transcriptional regulator, FadR family | Transcription [K] | 0.94 |
COG2188 | DNA-binding transcriptional regulator, GntR family | Transcription [K] | 0.94 |
COG2378 | Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains | Transcription [K] | 0.94 |
COG2524 | Predicted transcriptional regulator, contains C-terminal CBS domains | Transcription [K] | 0.94 |
COG3264 | Small-conductance mechanosensitive channel MscK | Cell wall/membrane/envelope biogenesis [M] | 0.94 |
⦗Top⦘ |
Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 93.40 % |
Unclassified | root | N/A | 6.60 % |
Visualization |
---|
Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
---|---|---|---|
3300005562|Ga0058697_10394805 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 684 | Open in IMG/M |
3300006845|Ga0075421_100737200 | All Organisms → cellular organisms → Bacteria | 1141 | Open in IMG/M |
3300006845|Ga0075421_101601848 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 708 | Open in IMG/M |
3300006846|Ga0075430_101770853 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 507 | Open in IMG/M |
3300006853|Ga0075420_100643937 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 914 | Open in IMG/M |
3300006876|Ga0079217_10599058 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 715 | Open in IMG/M |
3300006876|Ga0079217_11034157 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 605 | Open in IMG/M |
3300006894|Ga0079215_11191033 | Not Available | 579 | Open in IMG/M |
3300006918|Ga0079216_10390689 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 869 | Open in IMG/M |
3300006918|Ga0079216_10866306 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 675 | Open in IMG/M |
3300007004|Ga0079218_11285239 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae | 769 | Open in IMG/M |
3300009789|Ga0126307_10007029 | All Organisms → cellular organisms → Bacteria | 7992 | Open in IMG/M |
3300009789|Ga0126307_10144916 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 1899 | Open in IMG/M |
3300009789|Ga0126307_10402447 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1104 | Open in IMG/M |
3300009789|Ga0126307_10863208 | All Organisms → cellular organisms → Bacteria | 731 | Open in IMG/M |
3300009840|Ga0126313_10337982 | All Organisms → cellular organisms → Bacteria | 1184 | Open in IMG/M |
3300009840|Ga0126313_11382141 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 583 | Open in IMG/M |
3300010036|Ga0126305_10080808 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 1915 | Open in IMG/M |
3300010036|Ga0126305_10704750 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 683 | Open in IMG/M |
3300010036|Ga0126305_10804306 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 639 | Open in IMG/M |
3300010036|Ga0126305_10961607 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 585 | Open in IMG/M |
3300010036|Ga0126305_10986892 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 577 | Open in IMG/M |
3300010037|Ga0126304_10005777 | All Organisms → cellular organisms → Bacteria | 6452 | Open in IMG/M |
3300010037|Ga0126304_10936428 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 590 | Open in IMG/M |
3300010038|Ga0126315_10510594 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 767 | Open in IMG/M |
3300010039|Ga0126309_10168957 | Not Available | 1189 | Open in IMG/M |
3300010040|Ga0126308_10330685 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 1006 | Open in IMG/M |
3300010040|Ga0126308_10437674 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 877 | Open in IMG/M |
3300010041|Ga0126312_11077741 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 589 | Open in IMG/M |
3300010042|Ga0126314_11462446 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 514 | Open in IMG/M |
3300010044|Ga0126310_10175469 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 1388 | Open in IMG/M |
3300010045|Ga0126311_10090481 | Not Available | 2078 | Open in IMG/M |
3300010145|Ga0126321_1280226 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 761 | Open in IMG/M |
3300010166|Ga0126306_10133229 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 1831 | Open in IMG/M |
3300010166|Ga0126306_11603065 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 542 | Open in IMG/M |
3300010166|Ga0126306_11617140 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 540 | Open in IMG/M |
3300011332|Ga0126317_10839152 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 571 | Open in IMG/M |
3300012212|Ga0150985_110185533 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 733 | Open in IMG/M |
3300012212|Ga0150985_120400403 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 798 | Open in IMG/M |
3300012385|Ga0134023_1068286 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 503 | Open in IMG/M |
3300012469|Ga0150984_103821193 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 553 | Open in IMG/M |
3300012469|Ga0150984_116213493 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 503 | Open in IMG/M |
3300012469|Ga0150984_122881392 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 601 | Open in IMG/M |
3300013045|Ga0154016_133563 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 530 | Open in IMG/M |
3300014270|Ga0075325_1119406 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 640 | Open in IMG/M |
3300018000|Ga0184604_10354402 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 522 | Open in IMG/M |
3300018422|Ga0190265_11507781 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 786 | Open in IMG/M |
3300018432|Ga0190275_11767491 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 697 | Open in IMG/M |
3300018466|Ga0190268_11062677 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 653 | Open in IMG/M |
3300018469|Ga0190270_10554200 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1109 | Open in IMG/M |
3300019233|Ga0184645_1178109 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica | 536 | Open in IMG/M |
3300019254|Ga0184641_1107986 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 554 | Open in IMG/M |
3300019259|Ga0184646_1634264 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 547 | Open in IMG/M |
3300020070|Ga0206356_10463082 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 557 | Open in IMG/M |
3300020076|Ga0206355_1116655 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 557 | Open in IMG/M |
3300020081|Ga0206354_10582109 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 641 | Open in IMG/M |
3300022195|Ga0222625_1167520 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 598 | Open in IMG/M |
3300027909|Ga0209382_11325062 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 728 | Open in IMG/M |
3300027909|Ga0209382_11573356 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 651 | Open in IMG/M |
3300028592|Ga0247822_11505433 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica | 569 | Open in IMG/M |
3300029695|Ga0206087_1029254 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 612 | Open in IMG/M |
3300030496|Ga0268240_10183274 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 529 | Open in IMG/M |
3300030783|Ga0102752_1598241 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 839 | Open in IMG/M |
3300030785|Ga0102757_11205390 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 503 | Open in IMG/M |
3300030785|Ga0102757_11303880 | Not Available | 912 | Open in IMG/M |
3300030785|Ga0102757_11410675 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 688 | Open in IMG/M |
3300030785|Ga0102757_11481362 | Not Available | 802 | Open in IMG/M |
3300030829|Ga0308203_1039979 | All Organisms → cellular organisms → Bacteria | 682 | Open in IMG/M |
3300030829|Ga0308203_1054270 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 614 | Open in IMG/M |
3300030829|Ga0308203_1076029 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 546 | Open in IMG/M |
3300030829|Ga0308203_1078513 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 540 | Open in IMG/M |
3300030830|Ga0308205_1011929 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 902 | Open in IMG/M |
3300030830|Ga0308205_1015769 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 823 | Open in IMG/M |
3300030830|Ga0308205_1061010 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 518 | Open in IMG/M |
3300030902|Ga0308202_1047614 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 778 | Open in IMG/M |
3300030902|Ga0308202_1052478 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 751 | Open in IMG/M |
3300030902|Ga0308202_1129502 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 546 | Open in IMG/M |
3300030903|Ga0308206_1019489 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia | 1129 | Open in IMG/M |
3300030903|Ga0308206_1036813 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 917 | Open in IMG/M |
3300030903|Ga0308206_1150610 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 560 | Open in IMG/M |
3300030903|Ga0308206_1162651 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 545 | Open in IMG/M |
3300031039|Ga0102760_10839113 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 778 | Open in IMG/M |
3300031039|Ga0102760_10961279 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 685 | Open in IMG/M |
3300031058|Ga0308189_10225310 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 694 | Open in IMG/M |
3300031058|Ga0308189_10335370 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 603 | Open in IMG/M |
3300031089|Ga0102748_10890563 | Not Available | 518 | Open in IMG/M |
3300031091|Ga0308201_10055927 | All Organisms → cellular organisms → Bacteria | 1008 | Open in IMG/M |
3300031091|Ga0308201_10183494 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 680 | Open in IMG/M |
3300031091|Ga0308201_10206793 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica | 652 | Open in IMG/M |
3300031091|Ga0308201_10306879 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 567 | Open in IMG/M |
3300031091|Ga0308201_10418988 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 507 | Open in IMG/M |
3300031092|Ga0308204_10038807 | All Organisms → cellular organisms → Bacteria | 1101 | Open in IMG/M |
3300031092|Ga0308204_10167789 | All Organisms → cellular organisms → Bacteria | 664 | Open in IMG/M |
3300031092|Ga0308204_10236053 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 586 | Open in IMG/M |
3300031092|Ga0308204_10289982 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 544 | Open in IMG/M |
3300031092|Ga0308204_10318156 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 526 | Open in IMG/M |
3300031731|Ga0307405_11833037 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 540 | Open in IMG/M |
3300031824|Ga0307413_10963494 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 729 | Open in IMG/M |
3300031852|Ga0307410_10576089 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 936 | Open in IMG/M |
3300031938|Ga0308175_102672346 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 558 | Open in IMG/M |
3300031995|Ga0307409_102195360 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 582 | Open in IMG/M |
3300032002|Ga0307416_100012785 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica | 5675 | Open in IMG/M |
3300032002|Ga0307416_100973842 | All Organisms → cellular organisms → Bacteria | 951 | Open in IMG/M |
3300032126|Ga0307415_100571564 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1001 | Open in IMG/M |
3300032126|Ga0307415_101725337 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 604 | Open in IMG/M |
3300033551|Ga0247830_10846244 | Not Available | 728 | Open in IMG/M |
⦗Top⦘ |
Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 28.30% |
Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 22.64% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 7.55% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 7.55% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 5.66% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 5.66% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 3.77% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 3.77% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 2.83% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 2.83% |
Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 1.89% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 1.89% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.94% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.94% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 0.94% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Desert → Soil | 0.94% |
Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 0.94% |
Agave | Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave | 0.94% |
Visualization |
---|
Powered by ApexCharts |
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300005562 | Agave microbial communities from Guanajuato, Mexico - As.Ma.e | Host-Associated | Open in IMG/M |
3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
3300006846 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Host-Associated | Open in IMG/M |
3300006853 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4 | Host-Associated | Open in IMG/M |
3300006876 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 | Environmental | Open in IMG/M |
3300006894 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control | Environmental | Open in IMG/M |
3300006918 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 | Environmental | Open in IMG/M |
3300007004 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost | Environmental | Open in IMG/M |
3300009789 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28 | Environmental | Open in IMG/M |
3300009840 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A | Environmental | Open in IMG/M |
3300010036 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26 | Environmental | Open in IMG/M |
3300010037 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25 | Environmental | Open in IMG/M |
3300010038 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106 | Environmental | Open in IMG/M |
3300010039 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56 | Environmental | Open in IMG/M |
3300010040 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55 | Environmental | Open in IMG/M |
3300010041 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A | Environmental | Open in IMG/M |
3300010042 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B | Environmental | Open in IMG/M |
3300010044 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60 | Environmental | Open in IMG/M |
3300010045 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61 | Environmental | Open in IMG/M |
3300010145 | Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300010166 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27 | Environmental | Open in IMG/M |
3300011332 | Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
3300012385 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
3300013045 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300014270 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1 | Environmental | Open in IMG/M |
3300018000 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex | Environmental | Open in IMG/M |
3300018422 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T | Environmental | Open in IMG/M |
3300018432 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T | Environmental | Open in IMG/M |
3300018466 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T | Environmental | Open in IMG/M |
3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
3300019233 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300019254 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300019259 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300020076 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) | Environmental | Open in IMG/M |
3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022195 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
3300028592 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30 | Environmental | Open in IMG/M |
3300029695 | Metatranscriptome of soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030496 | Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2) | Environmental | Open in IMG/M |
3300030783 | Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 3C (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300030785 | Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300030829 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030830 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030902 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030903 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031039 | Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6C (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300031058 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031089 | Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 2B (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300031091 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031092 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Host-Associated | Open in IMG/M |
3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Host-Associated | Open in IMG/M |
3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Host-Associated | Open in IMG/M |
3300031938 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1 | Environmental | Open in IMG/M |
3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Host-Associated | Open in IMG/M |
3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Host-Associated | Open in IMG/M |
3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Host-Associated | Open in IMG/M |
3300033551 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5 | Environmental | Open in IMG/M |
Geographical Distribution | |
---|---|
Zoom: | Powered by OpenStreetMap |
⦗Top⦘ |
Protein ID | Sample Taxon ID | Habitat | Sequence |
Ga0058697_103948051 | 3300005562 | Agave | PLTHTDYDLLQGIEVFSADGEKVGSIAGIFHPNMEMPAARGRHYFLLDPGLIKDWFGGFDQVYLPESTIESVSADRAVLNLTSDQIKQQGKQWTTEPTGLASYRRI* |
Ga0075421_1007372002 | 3300006845 | Populus Rhizosphere | MSAVATWNPMTHTDYDTLKGLDVFSADGEKVGSIAEILHPNEEMPAARGKHFFLLDPGLMKDWFGGFNQVYLPESTIDSVGTDQITLSLGAKQIKKRGQEWTVEPTGLRNYRRV* |
Ga0075421_1016018481 | 3300006845 | Populus Rhizosphere | MSVTTTWNPMKHTDYDVLKGKEVFSANGESVGSIAGTFHPNMDMPAARGRHYFLLDPGLIKDWFQGFDQVYLPESSIESVSADRVVLNLTSEQIKQRGKEWTTEPTGLTSYRRV* |
Ga0075430_1017708532 | 3300006846 | Populus Rhizosphere | VYERITVMPVATTWNPTTHADYDALKGKDVFSADGEKVGSISQIMHPNMDMPAARGRHFFLLDPGLMKEWFGGFNQVYLPESTVSEVRPDRITLDLTAEQIKQRGSEWGMEPTGLASYRRA* |
Ga0075420_1006439372 | 3300006853 | Populus Rhizosphere | SVATTWNPMTHSDYDVLTGKEVFSANGEKVGSITGIYHPNMDMPSARGRHYFLLDPGLIKDWFQGFNQVYLPESAIESMSPDRVVLNLTSEQIKQRGKEWTTEPAGLASYRRV* |
Ga0079217_105990581 | 3300006876 | Agricultural Soil | MTHADYDTLKGKDVFSADGEKVGSISEILHPNMDMPAARGRHFFLLDPGLMKSWFGGFDQVYLPESTLDEVRSDRVLLNLTAEQVKQRGTEWTTQPNG |
Ga0079217_110341572 | 3300006876 | Agricultural Soil | MSVTATWNPMTHSDYDVLKGKDVFSADGEKVGSISQVLHPNMDMPAARGQHFFLLDPGLLKDWFGGFNYVYLPESALDEVGADRISLNLTADQIKQRGNEWTAEPTGLASYRRS* |
Ga0079215_111910331 | 3300006894 | Agricultural Soil | KGKDVFSADGEKVGSISEILHPNMDMPAARGRHFFLLDPGLMKSWFGGFDQVYLPESTLDEVGSDRILLNLTAEQVKQRGTEWTTQPNGVVNYRRA* |
Ga0079216_103906893 | 3300006918 | Agricultural Soil | MSVTTTWAPMTHTDYDPLQGKTVVSANGENVGSISAVFHPNMDMPAARGRHYFLLDPGLMKDWFGGFDTVYLPESAIEQVGADQVTLNLTSEQIKRQSTPWTKAPADLASYRRA* |
Ga0079216_108663061 | 3300006918 | Agricultural Soil | MSVTTTWNPMTHTDYDTLKGKDVFSANGESVGTIAGIFHPNMDMPAARGRHFFLLDPGLMKDWFGGFNQVYLPESTIGEVGSDRVTLSLTAEQIKQRGKEWTTQPTGVADYRRA* |
Ga0079218_112852391 | 3300007004 | Agricultural Soil | SALVGYERTSVMSVTTTWNPMTHADYDALKGKDVFSADGEKVGSISEILHPNMDMPAARGRHFFLLDPGLMKSWFGGFDQVYLPESTLDEVGSDRISLNLTADQIKQRGNEWTAQPSGLASYRRS* |
Ga0126307_100070294 | 3300009789 | Serpentine Soil | MTHTDYDLLQGREVFSANGEKVGSIAGIFHPNMDMPAARGRHYFLLDPGLIKDWFGGFDQVYLPESAIEMVSPDRVVLNLNSEQIKQRGTQWTTEPTGLTSYRRV* |
Ga0126307_101449162 | 3300009789 | Serpentine Soil | MTHTEYDLLQNREVFSADGEKVGSIAGIFHPNMDMPAARGRHYFLLDPGLIKDWFQGFDQVYLPESAIKSVSADRVVLSLTSEQIRQRGKEWTAEPTGLASYRRV* |
Ga0126307_104024472 | 3300009789 | Serpentine Soil | MTHTDYDTLKGKEVFSANGESVGSIAGIFHPTMDMPAARGRHYFLLDPGLLKDWFGGFDQVYLPESTIESVSADRVVLDLTSEQIKQRGQQWTTEPTGLTSYRRV* |
Ga0126307_108632082 | 3300009789 | Serpentine Soil | MTHSDYDVLKGKEVFSADGEKVGSISQILHPNMDMPAARGRHFFLLDPGLMKDWFGGFNQVYLPESAIDEVGSDRISLNLTADQIKQRGKQWTQEPSGLASYRQS* |
Ga0126313_103379822 | 3300009840 | Serpentine Soil | VLSANGEKVGSIAGIFHPNIEMPAARGRHYFLLDPGLIKDRFGGFDQAYLPESAIESASADRVVLNLTSDQIKQRGKQWTTESTGLASYRRI* |
Ga0126313_113821411 | 3300009840 | Serpentine Soil | MTWNPMTHTDYDTLKGKDVFSASGEKVGSISQIFHPTMDMPAARGRHYFLLDPGLLKDWFGGFDQVYLPESTIESVSADRVVLDLTSEQIKNQGKQWTTEPTGLSSYRRV* |
Ga0126305_100808082 | 3300010036 | Serpentine Soil | MTHTEYDLLQGREVFSVNGEKVGSIAGIFHPNMDMPAARGRHYFLLDPGLIKDWFGGFDQVYLPESAIESVSADRVVLNLTSEQIKQRGNQWTTEPTGLTSYRRV* |
Ga0126305_107047501 | 3300010036 | Serpentine Soil | MTHTEYDLLQNREVFSANGEKVGSIAGIFHPNMDMPAARGRHYFLLDPGLIKDWFGGFDRVYLPESAIESVSPDQVVLNLTSEQIKQRDKQWTTEPTGLASYRRV* |
Ga0126305_108043061 | 3300010036 | Serpentine Soil | MTHTEYDTLKGKDVFSANGEKVGSISQIFHPTMDMPAARGRHYFLLDPGLLKDWFGGFDQVYLPESTIESVSADRVVLDLTSEQIKNQGKQWTTEPTGLSSYRRV* |
Ga0126305_109616071 | 3300010036 | Serpentine Soil | MSVTTTWNPKTHTDYDTLKGKEVFSANGESVGTITGIFHPNMDMPAARGRHFFLLDPGLLKDWFGGFDQVYLPESTIESISAGRVVLNLTSDQIKQRGQQWTAEPTGLASYRRV* |
Ga0126305_109868921 | 3300010036 | Serpentine Soil | MTHTEYDLLQNREVFSADGEKVGSIAGIFHPNTDMPAARGRHYFLLDPGLIRDWFQGFDQVYLPESAIESVSADRVVLSLTSEQIKQRGKEWTAEPTGLASYRRV* |
Ga0126304_100057774 | 3300010037 | Serpentine Soil | MTHTDYDLLQGREVFSANGEKVGSIAGIFHPNMDMPAARGRHYFLLDPGLIKDWFGGFDQVYLPESAIEMVSPDRVVLNLNSEQIKQRGTQWTTEPTGLTSYRRI* |
Ga0126304_109364281 | 3300010037 | Serpentine Soil | MTHTDYDTLKGKDVFSANGEKVGSISQIFHPTMDMPAARGRHYFLLDPGLLKDWFGGFDQVYLPESTIESVSPDRVVLDLTSEQIKQRGNQWTTEPTGLTSYRRV* |
Ga0126315_105105942 | 3300010038 | Serpentine Soil | MTHTEYDLLQGREVFSANGEKVGSIAGIFHPNMDMPAARGRHYFLLDPGLIKDWFGGFDQVYLPESAIESVSPDQVVLNLTSEQIKQRGKQWTTEPTGLTSYRRV* |
Ga0126309_101689571 | 3300010039 | Serpentine Soil | VLSANGEKVGSIAGIFHPNIEMPAARGRHYFLLDPGLIKDRFGGFDQVYLPESAIESASADRVVLNLTSDQIKQRGKQWTTEPTGLASYRRI* |
Ga0126308_103306851 | 3300010040 | Serpentine Soil | MIDFMSVTPTLNRKMHTEYDVLHGREVLSANGEKVGSIAGIFHPNMDMPAARGRHYFLLDPGLIKDWFGGFDQVYLPESAIEMVSPDRVVLNLNSEQIKQRGTQWTTEPTGLTSYRRV* |
Ga0126308_104376742 | 3300010040 | Serpentine Soil | MSVTTTWNPLTHSDYDLLKGKDVFSADGEKVGSIAEILHPNMDMPAARGRHVFRVDPGRMKDWFGGFNQVYLPESTLDEVGLDRVTLNLTAEQIKQRGNEWTTQPTGVANYRRA* |
Ga0126312_110777411 | 3300010041 | Serpentine Soil | MTHTDYDTLKGKDVFSANGEKVGSITQIFHPTMDMPAARGRHYFLLDPGLLKDWFGGFDQVYLPESTIESVSADRVVLDLTSEQIKNQGKQWATEPTGLSNYRRV* |
Ga0126314_114624461 | 3300010042 | Serpentine Soil | FALAGYGRIAVMHAVATWNPMTHADYDVLKGKDVFSADGEKVGSIAEILHPNMDMPAARGRHFFLLDPGLLKDWFGGFNQVYLPESALDEVRSDRVSLNLTAEQIKQRGNEWTTEPTGLANYRRV* |
Ga0126310_101754692 | 3300010044 | Serpentine Soil | VLSANGEKVGSIAGIFHPNIEMPAARGRHYFLLDPGLIKDRFGGFDQVYLPESAIESASADRVVLNLTSDQIKQRGKQWTTEPTGLASYREI* |
Ga0126311_100904811 | 3300010045 | Serpentine Soil | EVLSANGEKVGSIAGIFHPNIEMPVAGGRHYFLLDPGVIKDRFGGFDQVYLPESAIESASADRVVLNLTSDQIKQRGKQWTTEPTGLASYRRI* |
Ga0126321_12802261 | 3300010145 | Soil | MTHTDYDLLQGQAVFSADGENVGTIAGIFHPNMDMPAARGRHYFLLDPGLIKDWFQGFDQVYLPESAIESVSADRVVLNLTSEQIKQRGKQWTAEPTGLASYRRV* |
Ga0126306_101332293 | 3300010166 | Serpentine Soil | MTHTEYDLLQNREVFSADGEKVGSIAGIFHPNMDMPAARGRHYFLLDPGLIKDWFQGFDQVYLPESAIESVSADRVVLSLTSEQIKQRGKEWTAEPTGLASYRRV* |
Ga0126306_116030651 | 3300010166 | Serpentine Soil | MTHTDYETLKGREVFSANGESVGTITAIFHPNADMPAARGRHYFLLDPGLLKDWFGGFDQVYLPESTIESVSADRVVLDLTSEQIKQRGQQWTAEPTGITSYRRV* |
Ga0126306_116171401 | 3300010166 | Serpentine Soil | MTHTEYDTLKGKDVFSANGEKVGSISQIFHPTMDMPAARGRHYFLLDPGLLKDWFGGFDQVYLPESTIESISADRVVLDLTSEQIKNQGQQWTTEPTGLSSYRRV* |
Ga0126317_108391521 | 3300011332 | Soil | MTHADYDTLKGKDVFSANGEKVGSIAAIFHPSMDMPAARGRHYFLLDPGLLKDWFGGFDQVYLPESAIENVSADRVTLDLSSEQIKQRGQQWSTEPTGFANYRRA* |
Ga0150985_1101855331 | 3300012212 | Avena Fatua Rhizosphere | MTHADYDPLKGKQVVSANGEQVGTIGQVFHPNQEMPAARGRHFFLLDPGLMKDWFGGFDKVYLPESAIDQVGTKQVTLNLTSQQIKQRGKEWTTEPSGLASYRRV* |
Ga0150985_1204004032 | 3300012212 | Avena Fatua Rhizosphere | MTHADYTQLQGKPVVSATGETVGSIRQIFHPNQDMPAARGRHYFLLDPGLMKDWFGGVDQAYLPESAIERVGTDRVVLNLNAEQIKQQSKQWTKEPNELASYRRG* |
Ga0134023_10682861 | 3300012385 | Grasslands Soil | MGVMTTWNPMTHADYDLLKDQPVFSADGERVGKIAQILHPALPMPAARGRHFFLLDPGLIKDWFQGFDQVYLPESAIESVTADGVHLNLTADQIKQRSREWTTQPADLVSYRRV* |
Ga0150984_1038211931 | 3300012469 | Avena Fatua Rhizosphere | MTHTEYDTLKGKDVFSANGEKVGSISQIFHPTVDMPAARGRHYFLLDPGLLKDWFGGFDQVYLPESTIESVSADRVVLDLTSEQIKNQGKQWTTEPTGLSSYRRV* |
Ga0150984_1162134931 | 3300012469 | Avena Fatua Rhizosphere | ALVGYERIIVMSVTTTWNPTTHSDYDTLKGKDVFSADGEKVGSISQVLHPNMDMPAARGRHFFLLDPGLLRDWFGGFNQVYLPESAINDVGSDRISLSLTADQIKQRGNEWTTQPTGLASYRRS* |
Ga0150984_1228813921 | 3300012469 | Avena Fatua Rhizosphere | MTHADYDVLKAQPVLSAEGERVGTIAQILHPALDMPAARGRHFFLLDPGLIKDWFQGFDQVYLPESAIESVTADGVHLKLTAPQIKQRSQEWTTQPVDLASYRRV* |
Ga0154016_1335631 | 3300013045 | Corn, Switchgrass And Miscanthus Rhizosphere | MTHLDYDALKGKPVFSADGKQVGSITEVYHPNMDMPAARGRHYFLLDPGLIKDLFQGYDQVYLPESAIEGVSADGVQLNLTADQIKQRGQEWAAQPSGFAKYRRG* |
Ga0075325_11194061 | 3300014270 | Natural And Restored Wetlands | MTTWNPTTHNDYDVLKGRDVFSADGEKVGEIAEILHPSMDMPAARGKHFFLLDPGLMKDWFGGFNQVYLPESAIDSVGSDRITLSLGANQIKKRGQEWTTEPTGLKNYRRV* |
Ga0184604_103544021 | 3300018000 | Groundwater Sediment | LHRYRVRELALVGYERIIVMSVTTTWNPMTHSDYDTLKGKDVFSADGEKVGSISEVLHPNMDMPAARGRHFFLVDPGLVKDWFGGFNQVYLPESAIDEVVSDRISLNLTADQIKQRGNEWTAQPSGLASYRQS |
Ga0190265_115077811 | 3300018422 | Soil | MTVATVWNPMTHTDYDALKGKAVFSANGEQVGSITGIFHPTTAMPAARGRHYFLLDPGMLTDCFAGVDKVYLPESAVEGVSADRVLMNLTSAQIKQHGPQWTTEPTGFASYRQV |
Ga0190275_117674912 | 3300018432 | Soil | MRATATWNPMTHADYDVLKGRDVVTADGEKVGSISEILHPKMDMPAARGNHFFLLDPGLMKDWFGGFNQVYLPESALDEVRSDRISLNLTSEQIKQRGNEWTTQPTGVGNYTRS |
Ga0190268_110626771 | 3300018466 | Soil | MSVTTTWNPMTHTDYDTLKGKEVFSANGESVGTIAGIFHPNMDMPAARGRHFFLLDPGLLKDWFGGFDQVYLPESTIESISADRVVLNLTSDQIKQRGQQWTAEPTGLTSYRRV |
Ga0190270_105542002 | 3300018469 | Soil | MSVTTTWNPMTHSDYDLLKGKEVFSADGEKVGSISQILHPNMDMPAARGRHFFLLDPGLMKDWFGGFNQVYLPESALDEVGSDRISLNLTAEQIKQRGKQWTTEPSGLASYRQS |
Ga0184645_11781091 | 3300019233 | Groundwater Sediment | ALVGYERITVVSVTTTWDPMTHSDYDVLKGKDVFSADGEKVGSISQVLHPNTDMPAARGRHFFLLDPGLMKDWFGGFNQVYLPESAVDEVGSDRISLNLTADQIKHRGNEWTAQPSGLASYRRS |
Ga0184641_11079861 | 3300019254 | Groundwater Sediment | MSVTTTWDPMTHADYDLLKGMAVVSADGQNVGSIAGIFHPNMEMPAARGRHYFLLDPGLIKDWFGGFDQVYVPESAIDSVSDDQVVLNMTTEQVKQRSQEWTTQPTGLASYRRA |
Ga0184646_16342641 | 3300019259 | Groundwater Sediment | MSVTTTWNPMTHADYDLLKGMAVVSADGQNVGSIAGIFHPNMEMPAARGRHYFLLDPGLIKDWFGGFDQVYVPESAIDSVSDDQVVLNMTTEQVKQRSQEWATQPTGLASYRRA |
Ga0206356_104630821 | 3300020070 | Corn, Switchgrass And Miscanthus Rhizosphere | MRVVTAWNPMTHLDYDVLKDKPVFSADGKQVGSISEVFHPNMDMPAARGRHYFLLDPGLIKDLFQGYDQVYLPESAIEGVSADGVQLNLTADQIKQRGQEWAAQPSGFAKYRRG |
Ga0206355_11166552 | 3300020076 | Corn, Switchgrass And Miscanthus Rhizosphere | MRVATAWNPMTHLDYDVLKGKPVFSADGKQVGSITEVYHPNMDMPAARGRHYFLLDPGLIKDLFQGYDQVYLPESAIEGVSADGVQLNLTADQIKQRGQEWAAQPSGFAKYRRG |
Ga0206354_105821091 | 3300020081 | Corn, Switchgrass And Miscanthus Rhizosphere | MRVATAWNPMTHLDYDVLKGKPVFSADGKQVGSITEVYHPNMDMPAARGRHYFLLDPGLIKDLFQGYDQVYLPESAIEGVSADGVQLNLTAEQIKQRGQEWAAQPSGFAKYRRG |
Ga0222625_11675201 | 3300022195 | Groundwater Sediment | MSVTTTWNPMTHTDHDILKGKEVFSANGKSVGTIAGTFHPNMDMPAARGRHYFLLDPGLIKDWFVGFDQVYLPESAIDSVSDDQVVLNMTTEQVKQRSQEWTIQPTGLASYRRA |
Ga0209382_113250622 | 3300027909 | Populus Rhizosphere | MSAVATWNPMTHTDYDTLKGLDVFSADGEKVGSIAEILHPNEEMPAARGKHFFLLDPGLMKDWFGGFNQVYLPESTIDSVGTDQITLSLGAKQIKKRGQEWTVEPTGLRNYRRV |
Ga0209382_115733561 | 3300027909 | Populus Rhizosphere | MSVTTTWNPMKHTDYDVLKGKEVFSANGESVGSIAGTFHPNMDMPAARGRHYFLLDPGLIKDWFQGFDQVYLPESSIESVSADRVVLNLTSEQIKQRGKEWTTEPTGLTSYRRV |
Ga0247822_115054331 | 3300028592 | Soil | MATMTTWNPTTHNDYDVLKGRDVFSADGEKVGEIAEILHPSMDMPAARGKHFFLLAPGLMKDWFGGFNQVYLPESAIETVGRDRVMLNLTAEQVKQRG |
Ga0206087_10292541 | 3300029695 | Soil | MSVTTTWNPMTHADYELLKGKSVFSADGEQVGSIGGIFHPNMEMPAARGRHYFLLDPGMIKDWFQGFDKVYLPESEIRGVEADRVVLDLTAKQVKQRGQEWTREPTGLADFRRA |
Ga0268240_101832741 | 3300030496 | Soil | MSVTTTWNPLTHTDYDLLQGIEVFSANGEKVGSIAGIFHPNMEMPAARGRHYFLLDPGLIKDWFGGFDQVYLPESTIESVSADRAVLNLTSDQIKQQGKQWTTEPTGLASYRRV |
Ga0102752_15982412 | 3300030783 | Soil | MSVITTWNPMTHTEYDLLQGREVFSANGEKVGSIAGIFHPNMDMPAARGRHYFLLDPGLIKDWFGGFDQVYLPESAIESVSPDRVVLNLTSEQIKQRGKQWTTEPTALTSYRRV |
Ga0102757_112053901 | 3300030785 | Soil | SVVTTWNPMTHADYDLLKDQPVFSADGERVGKIAQILHPAMTMPAARGRHFFLLDPGLIKDWFQGFDQVYLPESAIESVTADGVHLNLTAQQIKQRGQEWTTQPVELEYKVDGLKHVEDIKREDKD |
Ga0102757_113038802 | 3300030785 | Soil | MSVMTTWNPMTHTEYDLLQGREVFSANGEKVGSIAGIFHPNMDMPAAHGRHYFLLDPGLIKDWFGGIDQVYLPESAIESVSPDQVVLNLTSEQIKQRGKQWTTVPTGLTSYRRV |
Ga0102757_114106752 | 3300030785 | Soil | MSVMTTWNPMTHAEYDLLQGREVFSANGEKVGSIAGIFHPTMDMPAARGRHYFLLDPGLIKDWFGGFDQVYLPESAIESVSPDQVVLNLTSEQIKQRGKQWTTEPTGLTSYRRV |
Ga0102757_114813622 | 3300030785 | Soil | DYDTLKGKDVFSADGEKVGSISQVLHPNMDMPAARGRHFFLLDPGLLKDWFGGFNQVYLPESAINDVGSDRISLNLTADQIKQRGNEWTAQPSGLASYRRS |
Ga0308203_10399791 | 3300030829 | Soil | MSVTTTWNPKTFSEYGVLTGKDVFSADGEKVGSIKQILRPAMEMPAARGRHYFLLDPGLIKDWFQGFNQVYLPESAIDFVGPDRVSLNLTAEQIKQRGQEWAKQPAGLERYQRV |
Ga0308203_10542701 | 3300030829 | Soil | MSVTTTWNPMTHADYTQLQGKPVVSATGETVGSIRQIFHPNQDMPAARGRHYFLLDPGLMKDWFGGVDQAYLPESAIERVGTDRVVLNLNAEQIKQQSKQWTKEPKELASYRRG |
Ga0308203_10760291 | 3300030829 | Soil | MSVVTTWNPMTHADYDLLKDQPVFSADGERVGKIAQILHPAMTMPAARGRHFFLLDPGLIKDWFQGFDQVYLPESAIESVTVDGVHLNLTAQQIKQRGQEWTTQPVELASYRRV |
Ga0308203_10785131 | 3300030829 | Soil | MSVTTTWNPMTHADYDLLKGMAVVSADGQNVGSIAGIFHPNMEMPAARGRHYFLLDPGLIKDWFGGFDQVYVPESAIDSVSDDQVVLNMTTEQVKQRSQEWTTQPTGLASYRRA |
Ga0308205_10119292 | 3300030830 | Soil | MTHAEYDLLQGREVFSANGEKVGSIAGIFHPTMDMPAARGRHYFLLDPGLIKDWFGGFDQVYLPESAIESLSPDQVVLNLTSEQIKQRGKQWTTEPTGLTSYRRV |
Ga0308205_10157692 | 3300030830 | Soil | MSVTTTWNPMTHTDYDTLKGKDVFSANGEKVGSISQIFHPTMDMPAARGRHYFLLDPGLLKDWFGGFDQVYLPESTIESISADRVVLDLTSEQIKNQGQQWTTEPTGLTSYRRV |
Ga0308205_10610101 | 3300030830 | Soil | MSVTTTWNPMTHTDYDTLKGKDAFSANGEKVGSISQIFHPNADMPAARGRHYFLLDPGLMKDWFGGFDQVYLPESAIESVMADRVTLNLTSQQIKNQGTKWTTEPTELRSYRRV |
Ga0308202_10476142 | 3300030902 | Soil | MSVVTTWNPMTHTDYDALKGQPVFSAEGERVGKIAQILHPALNMPAARGRHFFLLDPGLIKDWFQGFDQVYLPEAAIERVTADGVHLTLTAPQIKQRSQEWTTPPGDLASYRQV |
Ga0308202_10524781 | 3300030902 | Soil | ALVGYERTIVMSVTTTWNPMTHSDYDVLKGKEVFSADGEKVGSISQILHPNMDMPAARGRHFFLLDPGLMKDWFGGFSPVYLPESAIDEVGSDRISLNLTADQIKQRGKQWTQEPSGLASYRQS |
Ga0308202_11295021 | 3300030902 | Soil | MSVTTTWNPMTHSDYDTLKGKDVFSADGEKVGSISQVLHPNMDMPAARGRHFFLLDPGLMKDWFGGFNQVYLPESAIGEVGSDRISLNLTADQIKQRSNEWTAQPSYRRS |
Ga0308206_10194891 | 3300030903 | Soil | ALVGYERIIVMSVTTTWNPMTHSDYDTLKGKDVFSADGEKVGSISQILHPNTDMPAARGRHFFLVDPGLVKDWFGGFNQVYLPESAIDEVGSDRISLNLTADQIKQRGNEWTAQPSGLASYRQS |
Ga0308206_10368132 | 3300030903 | Soil | MSVMTTWNPMTHTEYDLLQGREVFSTNGEKVGSIAGIFHPNMDMPAAHGRHYFLLDPGLIKDWFGGIDQVYLPESAIESVSPDQVVLNLTSEQIKQRGKQWTTVPTGLTSYRRV |
Ga0308206_11506101 | 3300030903 | Soil | MSVVTTWNPMTHADYDLLKDQPVFSADGERVGKIAQILHPAMTMPAARGRHFFLLDPGLIKDWFQGFDQVYLPESAIESVTADGLHLNLTAQQIKQRGQEWTTQPVELASYRRV |
Ga0308206_11626511 | 3300030903 | Soil | PMAHADYDPLKGKTVVSATGENVGSIGQIFHPNMDMPAARGRHYFLLDPGLMKDWFGGFDQVYLPESAIESVMADRVTLNLTSQQIKNQGTKWTTEPTELRSYRRV |
Ga0102760_108391131 | 3300031039 | Soil | MSVTTTWNPLTHSDYDLLKGKDVFSADGEKVGLIAEVLHPNMDMPAARGRHFFLLDPGLMKDWFGGFNQVYLPESTLDEVGSDRVTLNLTAEQIKQRGNEWTTQPTGVANYRRA |
Ga0102760_109612792 | 3300031039 | Soil | MSVTTTWNPTTHSDYDTLKGKDVFSADGEKVGSISQILHPNMDMPAARGRHFFLLDPGLLRDWFGGFNQVYLPESAINDVGSDRISLSLTADQIKQRGNEWTTQPTGLASYRRS |
Ga0308189_102253101 | 3300031058 | Soil | ALVGYERTIVMSVTTTWNPMTHSDYDVLKGKEVFSADGEKVGSISQILHPNMDMPAARGRHFFLLDPGLMKDWFGGFNPVYLPESAIDEVGSDRISLNLTADQIKQRGKQWTQEPSGLASYRQS |
Ga0308189_103353701 | 3300031058 | Soil | MSVTTTWNPMTHTDYDTLKGKDVFSANGEKVGSISQIFHPTMDMPAARGRHYFLLDPGLLKDWFGGFDQVYLPESTIESISADRVVLDLTSEQIKNQGKQWTTEPTGLSNYRCV |
Ga0102748_108905631 | 3300031089 | Soil | MTTWNPMTHTEYDLLQGREVFSANGEKVGSIAGIFHPNMDMPAAHGRHYFLLDPGLIKDWFGGFDQVYLPESAIESVSPDQVVLNLTSEQIKQRGKQWTTVPTGLTSYRRV |
Ga0308201_100559272 | 3300031091 | Soil | MSVTTTWNPMTHSDYDVLKGKEVFSADGEKVGSISQILHPNMDMPAARGRHFFLLDPGLMKDWFGGFSPVYLPESAIDEVGSDRISLNLTADQIKQRGKQWTQEPSGLASYRQS |
Ga0308201_101834941 | 3300031091 | Soil | MSVTTTWNPMTHADYDTLKGKDVFSANGEKVGSISQIFHPTMDMPAARGRHYFLLDPGLLKDWFGGFDQVYLPESTIESISADRVVLDLTSEQIKNQGKQWTTEPTGLKSYRRV |
Ga0308201_102067931 | 3300031091 | Soil | LALVGYERIIVMSVTTTWNPMTHSDYDTLKGKDVFSADGEKVGSISQILHPNTDMPAARGRHFFLVDPGLVKDWFGGFNQVYLPESAIDEVGSDRISLNLTADQIKQRGNEWTAQPSGLASYRQS |
Ga0308201_103068791 | 3300031091 | Soil | MSVTTTWNPMTHTDYDLLKGTAVVSADGQDVGSIAGIFHPTMEMPAARGRHYFLLDPGLIKDWFGGFDQVYLPESAIDRVSADRVVLNMTADQVKQRSQEWTRQPTGLASYRRA |
Ga0308201_104189881 | 3300031091 | Soil | LALVGYERIIVMSVTTTWNPMTHSDYDTLKGKDVFSADGEKVGSISQVLHPNMDMPAARGRHFFLLDPGLLKDWFGGFNQVYLPESAIDEVGADRISLSLTADQIKQRGNEWTAQPSGLASYRRSYSFETPVTGVL |
Ga0308204_100388071 | 3300031092 | Soil | NTVMSVTTTWNPMTHTDYDTLKGKDVFSANGEKVGSITQIFHPTMDMPAARGRHYFLLDPGLLKDWFGGFDQVYLPESTIESVSADRVVLDLTSEQIKNQGKQWATEPTGLSNYRRV |
Ga0308204_101677891 | 3300031092 | Soil | WNPMTHSDYDVLKGKEVFSADGEKVGSISQILHPNMDMPAARGRHFFLLDPGLMKDWFGGFSPVYLPESAIDEVGSDRISLNLTADQIKQRGKQWTQEPSGLASYRQS |
Ga0308204_102360531 | 3300031092 | Soil | VDYERIIVMSVTTTWNPLTHSDYELLKSKDVFSADGEKVGSIAEILHPNTGMPAARGRHFFLLDPGLMKDWFGGFNQVYLPESTLDEVRSDRVTLNLTAEQIKQRGNEWTTQPTGVANYRRA |
Ga0308204_102899821 | 3300031092 | Soil | SVTTTWKPMTHADYDLLKGMAVGSADGQNVGSIAGIFHPNMEMPAARGRHYFLLDPGLIKDWFGGFDQVYLPESAIDSVSDDQVVLNMTTEQVKQRSQEWTTQPTGLASYRRA |
Ga0308204_103181561 | 3300031092 | Soil | MTHAEYDLLQGREVFSANGEKVGSIAGIFHPTMDMPAARGRHYFLLDPGLIKDWFGGFDQVYLPESAIESVSPDQVVLNLTSEQIKQRGKHWTTEPTGLTSYRRV |
Ga0307405_118330371 | 3300031731 | Rhizosphere | MNSFFSLVARDLHGYTVRDFALVGYERIIVMSVTATWNPMTHSDYDTLKGKDVFSADGEKVGSISQVLHPNADMPVARGRHFFLLDPGLMKDWFGGFNQVYLPESAINDVGSDRISLNLTAEQIKQRGKEWTAQ |
Ga0307413_109634941 | 3300031824 | Rhizosphere | MNSFFSLVARDLHGYTVRDFALVGYERIIVMSVTATWNPMTHSDYDTLKGKDVFSADGEKVGSISQVLHPNADMPVARGRHFFLLDPGLMKDWFGGFNQVYLPESAINDVGSDRISLNLTAEQIKQRGKEWTAQPSGLASYRRS |
Ga0307410_105760891 | 3300031852 | Rhizosphere | MSVTTTWNPMTHTDYDLLQGIEVFSANGEKVGSIAGIFHPNMEMPAARGRHYFLLDPGLIKDWFGGFDQVYLPESAIESVSPDRVVLNLTSEQIKQRGKQWTMEPTGLASYRRI |
Ga0308175_1026723461 | 3300031938 | Soil | MSVTTTWNPMTHGDYDVLKGKDVFSADGEKVGSVSQILHPNMDMPAARGRHFFLLDPGLMKDWFGGFNQVYLPESAINDVGSDRISLNLTADQIKQRGNEWTAQPSGLASYRRS |
Ga0307409_1021953601 | 3300031995 | Rhizosphere | MSVTTTWNPMTHTDYDLLQGIEVFSANGEKVGSIAGIFHPNMEMPAARGRHYFLLDPGLIKDWFGGFDQVYLPESAIESVSPDRVVLNLTSEQIKQRSQEWTAEPTSLASYRRV |
Ga0307416_1000127856 | 3300032002 | Rhizosphere | MTHSDYDVLKGKDVFSADGEKVGSVSQILHPNMEMPAARGRHFFLLDPGLMKDWFGGFNQVYLPESAIDEVGSDRISLNLTADQIKQRGKQWTTEPSGLASYRRS |
Ga0307416_1009738422 | 3300032002 | Rhizosphere | MTHSDYDVLKGKDVFSADGEKVGSVSQILHPNMEMPAARGQHFFLLDPGLMKDWFGGFNQVYLPESAIDDVGSDRISLNVTADQIKQRGKDWTAQPSGLASYRRS |
Ga0307415_1005715642 | 3300032126 | Rhizosphere | MSVTTTWNPMTHSDYDVLKGKDVFSADGEKVGSVSQILHPNMEMPAARGRHFFLLDPGLMKDWFGGFNQVYLPESAIDEVGSDRISLNLTADQIKQRGKQWTTEPSGLASYRRS |
Ga0307415_1017253371 | 3300032126 | Rhizosphere | MNSFFSLVARDLHGYTVRDFALVGYERIIVMSVTTTWNPMTHSDYDTLKGKDVFSADGEKVGSISQVLHPNADMPVARGRHFFLLDPGLMKDWFGGFNQVYLPESAINDVGSDRISLNLTAEQIKQRGKEWTAQPSGLASY |
Ga0247830_108462441 | 3300033551 | Soil | MPAVATWIPTTHADYDTLKGKDVFSADGEKVGSIAEILHSDMEMPATRGRHFFLLDPGLMKDWFGGFNQVYPPESSIEAVGSDRVTLSLSAEQIKQRGQEWTAEPTGLKQYRRV |
⦗Top⦘ |