Metagenome / Metatranscriptome Family F093378

Basic Information
Family ID	F093378
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	50 residues
Representative Sequence	MKKWIIATLLLATAAVAQQTHNQYEPANAPGAGQKLLAQFAGDWDLVKTF
Number of Associated Samples	88
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	28.16 %
% of genes near scaffold ends (potentially truncated)	88.68 %
% of genes from short scaffolds (< 2000 bps)	88.68 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Bacteria (91.509 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (13.207 % of family members)
Environment Ontology (ENVO)	Unclassified (29.245 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.321 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 52.56% β-sheet: 0.00% Coil/Unstructured: 47.44%
Feature Viewer

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Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF03551	PadR	2.83
PF00891	Methyltransf_2	1.89
PF13561	adh_short_C2	1.89
PF13620	CarboxypepD_reg	1.89
PF02954	HTH_8	1.89
PF03965	Penicillinase_R	1.89
PF05569	Peptidase_M56	1.89
PF12850	Metallophos_2	0.94
PF13414	TPR_11	0.94
PF02687	FtsX	0.94
PF01649	Ribosomal_S20p	0.94
PF11004	Kdo_hydroxy	0.94
PF00999	Na_H_Exchanger	0.94
PF06762	LMF1	0.94
PF13650	Asp_protease_2	0.94
PF01594	AI-2E_transport	0.94
PF03061	4HBT	0.94
PF13098	Thioredoxin_2	0.94
PF12395	DUF3658	0.94
PF08753	NikR_C	0.94
PF07593	UnbV_ASPIC	0.94
PF15899	BNR_6	0.94
PF12867	DinB_2	0.94
PF07366	SnoaL	0.94
PF13590	DUF4136	0.94
PF11695	DUF3291	0.94
PF13493	DUF4118	0.94
PF14520	HHH_5	0.94
PF13727	CoA_binding_3	0.94
PF03976	PPK2	0.94
PF00120	Gln-synt_C	0.94
PF06441	EHN	0.94
PF00583	Acetyltransf_1	0.94
PF13376	OmdA	0.94
PF12680	SnoaL_2	0.94
PF05299	Peptidase_M61	0.94
PF02405	MlaE	0.94
PF13472	Lipase_GDSL_2	0.94
PF00899	ThiF	0.94
PF00080	Sod_Cu	0.94
PF02870	Methyltransf_1N	0.94
PF08818	DUF1801	0.94
PF04389	Peptidase_M28	0.94
PF14279	HNH_5	0.94
PF00005	ABC_tran	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	4.72
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	2.83
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	2.83
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	1.89
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.94
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.94
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.94
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.94
COG3975	Predicted metalloprotease, contains C-terminal PDZ domain	General function prediction only [R]	0.94
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.94
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.94
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.94
COG2032	Cu/Zn superoxide dismutase	Inorganic ion transport and metabolism [P]	0.94
COG0864	Metal-responsive transcriptional regulator, contains CopG/Arc/MetJ DNA-binding domain	Transcription [K]	0.94
COG0767	Permease subunit MlaE of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.94
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.94
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.94
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.94
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.94
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	0.94
COG0268	Ribosomal protein S20	Translation, ribosomal structure and biogenesis [J]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.51 %
Unclassified	root	N/A	8.49 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.51 %
Unclassified	root	N/A	8.49 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.51 %
Unclassified	root	N/A	8.49 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	59.43 %
Unclassified	root	N/A	8.49 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.83 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.89 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	35.85 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.21 %
Unclassified	root	N/A	8.49 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.94 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.94 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	33.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.21 %
Unclassified	root	N/A	8.49 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.94 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.94 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.94 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	33.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.21 %
Unclassified	root	N/A	8.49 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.94 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.94 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.94 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.94 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Alloacidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium	25.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.21 %
Unclassified	root	N/A	8.49 %
Bryocella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Bryocella	1.89 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.89 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.94 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.94 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.94 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.94 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	25.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.21 %
Unclassified	root	N/A	8.49 %
Bryocella elongata	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Bryocella → Bryocella elongata	1.89 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.94 %
Bradyrhizobium canariense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	0.94 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.94 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.94 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.94 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.94 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.94 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.94 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	25.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.21 %
Unclassified	root	N/A	8.49 %
Bryocella elongata	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Bryocella → Bryocella elongata	1.89 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	0.94 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.94 %
Bradyrhizobium canariense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	0.94 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.94 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.94 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.94 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.94 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.94 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	25.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.21 %
Unclassified	root	N/A	8.49 %
Bryocella elongata	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Bryocella → Bryocella elongata	1.89 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	0.94 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.94 %
Bradyrhizobium canariense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	0.94 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.94 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.94 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.94 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.94 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.94 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001084\|JGI12648J13191_1015486	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300001686\|C688J18823_10033955	All Organisms → cellular organisms → Bacteria	3498	Open in IMG/M
3300002568\|C688J35102_119060187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	632	Open in IMG/M
3300003505\|JGIcombinedJ51221_10265796	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	697	Open in IMG/M
3300004080\|Ga0062385_10350623	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	865	Open in IMG/M
3300004080\|Ga0062385_10817086	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	612	Open in IMG/M
3300004082\|Ga0062384_100173868	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300004091\|Ga0062387_101106431	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300004092\|Ga0062389_104497476	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	525	Open in IMG/M
3300004635\|Ga0062388_102141956	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	581	Open in IMG/M
3300005175\|Ga0066673_10406232	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300005434\|Ga0070709_10245248	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1288	Open in IMG/M
3300005435\|Ga0070714_100068034	All Organisms → cellular organisms → Bacteria	3073	Open in IMG/M
3300005436\|Ga0070713_101549764	Not Available	643	Open in IMG/M
3300005529\|Ga0070741_10370145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1324	Open in IMG/M
3300005532\|Ga0070739_10466353	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300005614\|Ga0068856_100581787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1141	Open in IMG/M
3300005712\|Ga0070764_10125892	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300005712\|Ga0070764_10782904	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	592	Open in IMG/M
3300005764\|Ga0066903_105722799	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	653	Open in IMG/M
3300005921\|Ga0070766_10168047	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300005921\|Ga0070766_10229938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1170	Open in IMG/M
3300006914\|Ga0075436_100882976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300009162\|Ga0075423_11842930	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	653	Open in IMG/M
3300009633\|Ga0116129_1040211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1496	Open in IMG/M
3300009638\|Ga0116113_1024595	Not Available	1337	Open in IMG/M
3300010047\|Ga0126382_10307009	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300010047\|Ga0126382_11229311	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300010048\|Ga0126373_12066292	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	632	Open in IMG/M
3300010048\|Ga0126373_12122714	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300010360\|Ga0126372_13258694	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	505	Open in IMG/M
3300010361\|Ga0126378_10185219	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2150	Open in IMG/M
3300010361\|Ga0126378_12887394	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300010361\|Ga0126378_13399494	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300010366\|Ga0126379_11788976	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300010366\|Ga0126379_11906267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300010376\|Ga0126381_102849078	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	689	Open in IMG/M
3300010398\|Ga0126383_11270708	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	826	Open in IMG/M
3300012209\|Ga0137379_11709337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300012285\|Ga0137370_10844303	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300014167\|Ga0181528_10218176	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1030	Open in IMG/M
3300014495\|Ga0182015_10205129	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1316	Open in IMG/M
3300014495\|Ga0182015_10300586	Not Available	1050	Open in IMG/M
3300014495\|Ga0182015_10616840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300016371\|Ga0182034_11392649	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	613	Open in IMG/M
3300016387\|Ga0182040_11484478	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	575	Open in IMG/M
3300017937\|Ga0187809_10055652	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300017972\|Ga0187781_11226347	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300017975\|Ga0187782_10807644	Not Available	725	Open in IMG/M
3300017993\|Ga0187823_10110093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300018468\|Ga0066662_10335154	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1292	Open in IMG/M
3300020582\|Ga0210395_10387626	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1051	Open in IMG/M
3300020583\|Ga0210401_10789468	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	809	Open in IMG/M
3300021377\|Ga0213874_10031438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1536	Open in IMG/M
3300021402\|Ga0210385_10094824	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2073	Open in IMG/M
3300021404\|Ga0210389_10740991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300021405\|Ga0210387_11220745	All Organisms → cellular organisms → Bacteria → Acidobacteria	652	Open in IMG/M
3300021407\|Ga0210383_10594158	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	954	Open in IMG/M
3300021407\|Ga0210383_10686094	Not Available	881	Open in IMG/M
3300021560\|Ga0126371_11298220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300022508\|Ga0222728_1015630	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300026078\|Ga0207702_10550592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1128	Open in IMG/M
3300027545\|Ga0209008_1120582	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	582	Open in IMG/M
3300027773\|Ga0209810_1308512	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300027826\|Ga0209060_10348458	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300027829\|Ga0209773_10069281	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1439	Open in IMG/M
3300027853\|Ga0209274_10192193	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1037	Open in IMG/M
3300027853\|Ga0209274_10278163	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300027855\|Ga0209693_10297624	All Organisms → cellular organisms → Bacteria → Acidobacteria	787	Open in IMG/M
3300027869\|Ga0209579_10019822	All Organisms → cellular organisms → Bacteria → Acidobacteria	3811	Open in IMG/M
3300027879\|Ga0209169_10438036	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300028023\|Ga0265357_1000791	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2068	Open in IMG/M
3300028798\|Ga0302222_10242055	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	704	Open in IMG/M
3300028906\|Ga0308309_10681703	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300029915\|Ga0311358_10753751	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Bryocella → Bryocella elongata	706	Open in IMG/M
3300029951\|Ga0311371_10231014	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Bryocella → Bryocella elongata	2698	Open in IMG/M
3300029999\|Ga0311339_11316254	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	654	Open in IMG/M
3300029999\|Ga0311339_11719705	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	548	Open in IMG/M
3300030007\|Ga0311338_11857203	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	540	Open in IMG/M
3300030054\|Ga0302182_10094383	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300030520\|Ga0311372_11411979	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	867	Open in IMG/M
3300030520\|Ga0311372_12021843	All Organisms → cellular organisms → Bacteria → Acidobacteria	674	Open in IMG/M
3300030617\|Ga0311356_10733754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	943	Open in IMG/M
3300030739\|Ga0302311_10478222	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	861	Open in IMG/M
3300030940\|Ga0265740_1039506	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300031234\|Ga0302325_10138073	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4409	Open in IMG/M
3300031236\|Ga0302324_100610259	All Organisms → cellular organisms → Bacteria → Acidobacteria	1562	Open in IMG/M
3300031446\|Ga0170820_14009051	Not Available	589	Open in IMG/M
3300031708\|Ga0310686_108082507	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	549	Open in IMG/M
3300031823\|Ga0307478_11802651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	503	Open in IMG/M
3300031910\|Ga0306923_12440389	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300032074\|Ga0308173_11996289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300032770\|Ga0335085_11961062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300032782\|Ga0335082_10836630	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300032892\|Ga0335081_12150976	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300032892\|Ga0335081_12624490	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300032895\|Ga0335074_10103523	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	3740	Open in IMG/M
3300032895\|Ga0335074_10410590	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300032896\|Ga0335075_11183517	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	665	Open in IMG/M
3300032898\|Ga0335072_10278046	All Organisms → cellular organisms → Bacteria → Acidobacteria	1897	Open in IMG/M
3300033004\|Ga0335084_11407593	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300033004\|Ga0335084_12219954	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300033134\|Ga0335073_10903259	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	930	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.40%
Host-Associated	Host-Associated	6.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.08%
Aquatic	Environmental → Aquatic	11.32%
Plants	Host-Associated → Plants	6.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.81%
Peat	Environmental → Terrestrial → Peat	12.26%
Freshwater	Environmental → Aquatic → Freshwater	11.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.83%
Roots	Host-Associated → Plants → Roots	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.79%
Loam	Environmental → Terrestrial → Soil → Loam	17.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.09%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.26%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.55%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.83%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.89%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.94%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.21%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	11.32%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	10.38%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.55%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.60%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.83%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	2.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.94%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.94%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300028023	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5	Host-Associated	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030940	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093378

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12648J13191_10154862	3300001084	Forest Soil	MTKWIAVTLLFATAAVAQQTHNQYEPPNVPGAGQKLLAQFAGDWDVIKTFFPMNGKPIVTKG
C688J18823_100339555	3300001686	Soil	MTKWITAILLITTAAVAQQTHNQYEPLNAAGAGQKLLAQFA
C688J35102_1190601872	3300002568	Soil	MTKWIAAILLIAAAAVAQQTHNQYEPANAPGAGQKLLAQMAGEWDVVKTFFPA
JGIcombinedJ51221_102657961	3300003505	Forest Soil	MLLIGAAAVAQQTHKEYEPANAPGAGQKLLAQFVGDWDLVKTFFPRDGKPNVTKGT
Ga0062385_103506232	3300004080	Bog Forest Soil	MTKCIIATLLIAATAFAQQTHNQYEPPNGPGAGQKLLAQFVGDWDVVKTFFPMNGKP
Ga0062385_108170862	3300004080	Bog Forest Soil	MRKWIVATLLFATAAFAQQTHNQYEPPNGPGAGQKLLAQFVGDWDVV
Ga0062384_1001738682	3300004082	Bog Forest Soil	MKNMTTRNWIAAALFLATVAVAQQTHHQYEPPNAPGAGQKLL
Ga0062387_1011064311	3300004091	Bog Forest Soil	MGATLAIFAYHLPAMRKWITTTLLIATAALAQQNHNQYEPPNGPGAGQRLLAKFVGDWDV
Ga0062389_1044974762	3300004092	Bog Forest Soil	MKKWMTVTLLIAAAALAQQTHSQYEPSNAAGAGQKLLAQFAGDWD
Ga0062388_1021419562	3300004635	Bog Forest Soil	MRNWITATLLIATAAVAQQTHNQYEPPNGPGSGQKLLAQFVGDWDVVKSFFPVNG
Ga0066673_104062323	3300005175	Soil	MRRLSIALLFVASVAGAQQTHQQYEPPNAPGAGQKLLAQFSGDWDLVKTF
Ga0070709_102452483	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAKCIPVILLICAAAGAQQNHNQYEPATTAGAGQKLLAQFAGEW
Ga0070714_1000680344	3300005435	Agricultural Soil	MKMMKRYAVVILLFASVAFAQQTHNQYEPPNAPGAGQKLLVQFAGDWEVVKTFFPANGKPVV
Ga0070713_1015497641	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAKCIPVILLICAAAGAQQNHNQYEPATTAGAGQKLLAQFAGEWDVVK
Ga0070741_103701451	3300005529	Surface Soil	MTKWLIAIMLLASATVAQQTHNQYEPANAPGAGQKLLAQF
Ga0070739_104663532	3300005532	Surface Soil	MKKCITATLLIVTAAFAQETHNQYEPRGAPGAGQKLLVQFTG
Ga0070731_108111791	3300005538	Surface Soil	MKNWITATLLIASAAFAQDTQNQYEPPNAAGAGQKL
Ga0068856_1005817873	3300005614	Corn Rhizosphere	MKTMKRWIVAMLLFAGVAFAQQTHNQYEPPNAPGAGQKLLAQFAGDWEVVKTFFPANGKP
Ga0070764_101258922	3300005712	Soil	MKKWITATLLIAAAAAAQQTHNQYEPPNAAGAGQKLLAQFVGD*
Ga0070764_107829041	3300005712	Soil	MNKWIIAMLFIATMAVAQQTHNQYEPPNAPGGGQKLLAQFAGDWDVVKTFFPL
Ga0066903_1057227992	3300005764	Tropical Forest Soil	MKKWIVVTFLIVAHAVAQQTHNQYEPANAPGAGQKLLVQFAGDWDLVKTFFP
Ga0070766_101680472	3300005921	Soil	MTSTLLLAAAAITQQTHNQYEPPNGAGAAQKLRAQFMGDWDVFKTLFPLNGSRS*
Ga0070766_102299381	3300005921	Soil	MRRWIIATLLIASAAVAAPQQTHNQYEPPNAPGAGQKLLAQFAGDWDVVK
Ga0075436_1008829761	3300006914	Populus Rhizosphere	MAKCIPVILLICAAAGAQQNHNQYEPATTAGAGQKLLAQFAGEWDVVKTFFPMNGKPIVTKA
Ga0075423_118429302	3300009162	Populus Rhizosphere	MKKWITATLLIATAVVAQQTHNQYEPPNAPGAGQRLLAQFAGDWDVV
Ga0116129_10402111	3300009633	Peatland	MRKWTIVALFFATAAVAQQTHKEYEPPSAAGAGQKLLAQFAGDWDMVKTFFPANGQPTVTKGT
Ga0116113_10245951	3300009638	Peatland	MIRVTKKTVIAILLVTFETIAQQTHNQYEPPNAVGAGQKLLAQFAGDWDVVKTFFPTNGK
Ga0126382_103070093	3300010047	Tropical Forest Soil	MMKWITAILLLTTAAVAQQTHNQYEPATAVGAGQKLLAQFVGDW
Ga0126382_112293112	3300010047	Tropical Forest Soil	MKKWITTTLLLATAAVAQQTHNQYEPPNAPGAGQRLLAQFTGEWDLVKTFFPMN
Ga0126373_120662922	3300010048	Tropical Forest Soil	MTKTKWITAILLITTAAVAQQTHNQYEPPNAAGAGQKLLAQFVG
Ga0126373_121227141	3300010048	Tropical Forest Soil	MKKWTVVMLLILAPAVAQQTHNQYEPANAPGAGQKLL
Ga0126372_132586941	3300010360	Tropical Forest Soil	MKKHLLAIVLLGIALLAQQTQNQYEPANAPGAGQKLLAQFAGDWDV
Ga0126378_101852191	3300010361	Tropical Forest Soil	MKKWLTATFLIATAAVAQQTHNQYEPPNAAGAGQKLLAQFAGDWDLVKTF
Ga0126378_128873942	3300010361	Tropical Forest Soil	MKKWILATLLIATASIAQQTHNQYEPANEPGAGQKLLAQFSGD
Ga0126378_133994941	3300010361	Tropical Forest Soil	MRKWIIATLLAATAAVAQQTHNQYEPSNAPGAGQRLLAQFAGDWDV
Ga0126379_117889762	3300010366	Tropical Forest Soil	MRKWIIATLLAATAAVAQQTHNQYEPPNAPGAGQRLLAQFAGDWDVL
Ga0126379_119062672	3300010366	Tropical Forest Soil	MEKWFFATLLIATAAIAQQTHNQYEPPNTPGAGQRLLAQFAGDWEVVKTFFPINGKPIVT
Ga0126381_1000800504	3300010376	Tropical Forest Soil	MKKWITATFLIATAVVAQQTHNQYEPPNAAGAGG*
Ga0126381_1028490781	3300010376	Tropical Forest Soil	MRKWIAAILLITTAAVAQQTHNQYEPANAPGAGQKLLAQFEGEWDVV
Ga0126383_112707081	3300010398	Tropical Forest Soil	MKKWIVAASLIATAALAQQTHNQYEPPNAAGAGQRLLAQFAGDWDVVKTFFPMNGKPIVTKG
Ga0137379_117093371	3300012209	Vadose Zone Soil	MKKSLALFWLVAASVFAQQTHNQYEPANATGAGQKFLSQFAGDWDLV
Ga0137370_108443032	3300012285	Vadose Zone Soil	MTKWITAILLVTTAAVAQQTHNQYEPQNAAGAGQKLLAQFAGEWDVVKTFFPTNG
Ga0181528_102181761	3300014167	Bog	MRKWITAALLIAASAVAQQTHNQYEPPNAPGAGQKLLAQFAGDWDVVKTFFPMNGT
Ga0182015_102051291	3300014495	Palsa	MRKWITAATLFIGTVAVAQQTHNQYEPPNAPGAGQKLLAQFAGEWD*
Ga0182015_103005861	3300014495	Palsa	MNKWITAMLLIAAGAFAQQTHDQYEPKNAVGAGQKLLAQFAGD
Ga0182015_106168402	3300014495	Palsa	LSRSAAAALAQQSHNQYEPANAAGAGQKLLAQFTGDWDVIKTSSR*
Ga0182034_113926491	3300016371	Soil	MRKWITAMLLMVAAAVAQQTHNQYEPPNAPGAGQKLLSQFAGDWDVIKT
Ga0182040_114844781	3300016387	Soil	MLLMVAAAVAQQTHNQYEPPNAPGAGQKLLAQFVGDWDVVKTFFPANGKPIVTKGTC
Ga0187809_100556523	3300017937	Freshwater Sediment	MKKIAVIVVALCAAAASAQQTHQQYEPANAPGAGQKLLARFAGDWDLVKTFYPMNGKPIVTK
Ga0187781_112263471	3300017972	Tropical Peatland	MLKWVIVALFLANSTFPQETHDQYEPPNAAGAGQKLLAQFTGDWEVVKT
Ga0187782_108076442	3300017975	Tropical Peatland	MKKWITATLLIATAALAQQTYNQYEPPNAPGAGQKLLAQFTGDWEVVKTF
Ga0187823_101100931	3300017993	Freshwater Sediment	MTKWIAVILFLASAALAQQTHNQYEPPSGAGAGQK
Ga0066662_103351542	3300018468	Grasslands Soil	MIKWISAILLITAAAVAQQTHNQYEPPNAPGAGQKLLAQFA
Ga0210395_103876262	3300020582	Soil	MTSTLLLAAAAITQQTHNQYEPPNGAGAAQKLRAQFMGDWDVFKTLFPLNGSRS
Ga0210401_107894681	3300020583	Soil	MTKWITAILLITTAAVAQQTHNQYEPPAAAGAGQKLLAQFVGDWDVVK
Ga0213874_100314383	3300021377	Plant Roots	MTKWIAVMLFLASAAFAQQTHNQYEPPSGAGAGQKLLA
Ga0210385_100948241	3300021402	Soil	MTSTLLLAAAAITPQTHNQYEPPNGAGAAQKLRAQFMGDWDVFKTLFPLNGSRS
Ga0210389_107409912	3300021404	Soil	MKKWILATLLIASAAVAQQTHNQYEPANAAGAGQKLLAQFAGEWDVVKT
Ga0210387_112207451	3300021405	Soil	MPALFKYHPPVMKNWVLAILLVATAAVGQQTHNQYEPANELGAGQKLLSQFAGDWDLVKTFFPMNGK
Ga0210383_105941583	3300021407	Soil	MKKWILAILLIASVAVAQQTHNQYEPANAAGAGQKLL
Ga0210383_106860942	3300021407	Soil	MTSTLLLAAAAITPQTHNQYEPPNGAGAAQKLRAQFMGDWDVFKTLFP
Ga0126371_112982202	3300021560	Tropical Forest Soil	MPAVLPYDLRAMNKWILAMLLIVAAAVAQQTHNQYEPATAVGAGQKLLAQFVGDWDVVKTFFPANG
Ga0222728_10156302	3300022508	Soil	MKKWIVATVLVATAAVAQQTHNQYEPPNAPGAGQKLLAQFAGDWEVVKTFFPMNGKP
Ga0207702_105505923	3300026078	Corn Rhizosphere	MKEAYVMKTMKRWIVAMLLFAGVAFAQQTHNQYEPPNAPGAGQKLLAQFAGDWEVVKTFFPANGK
Ga0207698_100867781	3300026142	Corn Rhizosphere	VMKTMKRWIVAMLLFAGVAFAQQTHNQYEPPNAPGA
Ga0209008_11205821	3300027545	Forest Soil	MRKRIIATLLIATAAVAAAQQAHNQYEPPNAPGAGQKLLAQFAGDWDVVKSFF
Ga0209810_13085122	3300027773	Surface Soil	MKKCITATLLIVTAAFAQETHNQYEPRGAPGAGQKLLVQFTGD
Ga0209060_103484582	3300027826	Surface Soil	MRKAIAAIFLMAGAALAQQTHNQYEPQNAPGAGQKLLAQFAGEWDV
Ga0209773_100692811	3300027829	Bog Forest Soil	MKKWILATLLIASAAVAQQTHNQYEPANAAGAGQKLLAQFAGEWDVVKTFFPVSG
Ga0209274_101921931	3300027853	Soil	MLLIGAAAVAQQTHKEYEPANAPGAGQKLLAQFVGDWDLVKTF
Ga0209274_102781632	3300027853	Soil	MLIGMLAVAQQTHNRYEPPNAPGAGQKLLAQFVGDWDVVKTFFPL
Ga0209693_102976241	3300027855	Soil	MKKWIIATLLLATAAVAQQTHNQYEPANAPGAGQKLLAQFAGDWDLVKTF
Ga0209579_100198222	3300027869	Surface Soil	MLPLFAYRMGAMKNMKNMKKTIIATLLIVTAAVAQQTHNQYEPPNAPGAGQKLLAQFAGE
Ga0209169_104380362	3300027879	Soil	MKKWITATLLIAAAAAAQQTHNQYEPPNAAGAGQKLLAQFVGD
Ga0265357_10007915	3300028023	Rhizosphere	MRTTKKWIIATLFIATAVFAQQTHNQYEPPNGPGAGQKLLAQFAGDWDVVKTFFP
Ga0302222_102420551	3300028798	Palsa	MKRWITAILLIATAAAAQQTHNQYEPPNAPGAGQKLLMQFAGDWDVVKTF
Ga0308309_106817031	3300028906	Soil	MRKWIIATLLVATAAVAQQTHNQYEPPNMAGAGQKLLAQFAGDRDVVKT
Ga0311358_107537512	3300029915	Bog	MRKLIVVALLFASVAGAQQTHKEYEPPSAPGAGQKLLAQFVGDWDMVKTIFPANGKP
Ga0311371_102310142	3300029951	Palsa	MRKLIFTTCLLFASVAIAQQTHKEYEPPTEAGAGQKLLAQYSGDWDMTKTFFPATGTPVVTKG
Ga0311339_113162542	3300029999	Palsa	MRKWIIVALFFATVAVAQQTHKEYEPPSAAGAGQKLLAQFAGDWDMMKTFFPANG
Ga0311339_117197052	3300029999	Palsa	MKKKWIIAILLVATAAAARQTHNQYEPPNAPGAGQKLLAQFVGDWEVVKTFFPMNGKPAV
Ga0311338_118572031	3300030007	Palsa	MKKKWIIAILLVATAAVAQQTHNQYEPPNAPGAGQKLLAQFVG
Ga0302182_100943833	3300030054	Palsa	MQRWIIAMLLIAAAVFAQQTHNQYEPPNAAGAGQKLLAQFAGD
Ga0311372_114119792	3300030520	Palsa	MRKLIVVASLLFASVAMAQQTHKEYEPPTEAGAGQKLLAQFAGDWDMVKTFFPANGK
Ga0311372_120218431	3300030520	Palsa	MKTWMTAALFIMIASGAAAQQTHNQYEPPNAPGAGQKLLAQFTGDW
Ga0311356_107337541	3300030617	Palsa	MKRWITAILLIATAAAAQQTHNQYEPPNAPGAGQKLLMQFAGDWDVVKTFFPK
Ga0302311_104782221	3300030739	Palsa	MRKWIIVALFFATVAVAQQTHKEYEPPSEAGAGQKLLAQFAGDWDMVKTFFPANGKPV
Ga0265740_10395062	3300030940	Soil	MRKLIIAILLVATAVFAQQTHTQYEPPNAPGAGQKLLTQF
Ga0302325_101380734	3300031234	Palsa	MRKWITATLLIATAVLAQQTHNQYEPPNPPGAGQRLLAQFAGDWDVVK
Ga0302324_1006102591	3300031236	Palsa	MRAVFEISFESMRKWITATLILAAAVVAQQTHKEYEPPNAAGAGQKLLAQFAGDWDVLKTFFPA
Ga0170820_140090512	3300031446	Forest Soil	MLAIFAYCFAAMKKWIFATLLIATAAAAQQTHNQYEPPNAAGDGQKLLAQFAGDWDLVK
Ga0310686_1080825071	3300031708	Soil	MKNIRKWIFVTLLAATAAFAQQTHNQYEPPNRPGAGQKLLAQFAGDWDV
Ga0307478_118026512	3300031823	Hardwood Forest Soil	MTKWITAILLIVTAAVAQQTHNQYEPPNAAGAGQKLLAQFVGDWDVVKTFFPAN
Ga0306923_124403891	3300031910	Soil	MRKWITATLLIASAAVAQQTHNQYEPANAPGAGQRLLAQLAGDWDVVKTFFPMN
Ga0308173_119962892	3300032074	Soil	MKMKIWTVAVLLFANVAFAQKTHDQYEPPNAPGSGQKLLAEFAGNWDVVKTF
Ga0335085_119610621	3300032770	Soil	MKTWSRATTVVAVSLFVASLAAAQQTHNQYEPANATGAGQKLLAQFAGDWDVVKTFFP
Ga0335082_108366302	3300032782	Soil	MKTWIVLTLLATTAALAQQTHKEYEPPNAPGAGQKLLAQFAGDWDVVKTFFPKEGKP
Ga0335081_121509762	3300032892	Soil	MIAALLLATAAFAQQTHNQYEPPNAPGAGQKLLAQFAGDWDLVKTFFPMNGKPIVT
Ga0335081_126244901	3300032892	Soil	MTKRIIAILLLAVGVVAQQTHNQYEPPNGAGAGQKLLAQFAGDWDVVKTF
Ga0335074_101035231	3300032895	Soil	LLLVATGAGAQQTHNQYEPRNAPGAGQKLLAQFAGDWDVVKTFFPTNGKPIITKG
Ga0335074_104105902	3300032895	Soil	MKKWITATLLMVPAVFAQQTHNEYEPPNAPGAGQKLLAEFTGDWDVVKTFFPASGKPI
Ga0335075_111835172	3300032896	Soil	MRAMHTMRKWILFILLSATPAAAQQTHNQYEPPTGPGAGQKLLA
Ga0335072_102780462	3300032898	Soil	MTKWIAALLLVTNLAAAQQTHNEYEPPNAPGAGQKLLAEFVG
Ga0335084_114075931	3300033004	Soil	MTKYLLAIFLLAGAAFGQETHNQYEPPNTVGAGQKLLAQFAGEWEVVKT
Ga0335084_122199542	3300033004	Soil	MKNWILAVLLLATAGVAQQTHNQSEPSSAVGDGQKLLAQFAGD
Ga0335073_109032591	3300033134	Soil	MRKWIVATLLFATVAVAQETHNQYEPPNAPGAGQKLLAQFVGDWDVVKTF

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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