Metagenome Family F093364

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093364
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	44 residues
Representative Sequence	MSTKENAIGRRSLLSTGAAAAGLGLLADLEAYPQNVNRNSIPSDLK
Number of Associated Samples	93
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	90.57 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.623 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (13.207 % of family members)
Environment Ontology (ENVO)	Unclassified (18.868 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.453 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 39.19% β-sheet: 0.00% Coil/Unstructured: 60.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF07676	PD40	4.72
PF00144	Beta-lactamase	2.83
PF12543	DUF3738	2.83
PF01850	PIN	1.89
PF13378	MR_MLE_C	1.89
PF02129	Peptidase_S15	0.94
PF07366	SnoaL	0.94
PF13414	TPR_11	0.94
PF13692	Glyco_trans_1_4	0.94
PF01381	HTH_3	0.94
PF13384	HTH_23	0.94
PF01261	AP_endonuc_2	0.94
PF09876	DUF2103	0.94
PF00069	Pkinase	0.94
PF02518	HATPase_c	0.94
PF13442	Cytochrome_CBB3	0.94
PF05724	TPMT	0.94
PF06283	ThuA	0.94
PF08450	SGL	0.94
PF13515	FUSC_2	0.94
PF13714	PEP_mutase	0.94
PF13701	DDE_Tnp_1_4	0.94
PF13620	CarboxypepD_reg	0.94
PF14870	PSII_BNR	0.94
PF00027	cNMP_binding	0.94
PF15919	HicB_lk_antitox	0.94
PF01738	DLH	0.94
PF01569	PAP2	0.94
PF05635	23S_rRNA_IVP	0.94
PF13561	adh_short_C2	0.94
PF01152	Bac_globin	0.94
PF09957	VapB_antitoxin	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.77
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	2.83
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	2.83
COG2367	Beta-lactamase class A	Defense mechanisms [V]	2.83
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.94
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.94
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.94
COG4813	Trehalose utilization protein	Carbohydrate transport and metabolism [G]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.62 %
Unclassified	root	N/A	10.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.62 %
Unclassified	root	N/A	10.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.62 %
Unclassified	root	N/A	10.38 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	67.92 %
Unclassified	root	N/A	10.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11.32 %
Unclassified	root	N/A	10.38 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.77 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.94 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.38 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.77 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.94 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.94 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.38 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.77 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.94 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.94 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.94 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.77 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.89 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.94 %
Acidobacteriales bacterium 59-55	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 59-55	0.94 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	0.94 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.94 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.94 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.77 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.94 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.94 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.94 %
Acidicapsa ligni	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	0.94 %
Granulicella rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	0.94 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.94 %
Acidobacteriales bacterium 59-55	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 59-55	0.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.94 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_101016600	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300005327\|Ga0070658_10875589	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	781	Open in IMG/M
3300005344\|Ga0070661_100547420	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 59-55	931	Open in IMG/M
3300005435\|Ga0070714_100420135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1266	Open in IMG/M
3300005535\|Ga0070684_100645043	All Organisms → cellular organisms → Bacteria → Acidobacteria	986	Open in IMG/M
3300005764\|Ga0066903_100884271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1614	Open in IMG/M
3300005764\|Ga0066903_103966302	Not Available	794	Open in IMG/M
3300005921\|Ga0070766_11174375	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300006028\|Ga0070717_11278300	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300006052\|Ga0075029_100001913	All Organisms → cellular organisms → Bacteria	11842	Open in IMG/M
3300006052\|Ga0075029_100026000	All Organisms → cellular organisms → Bacteria	3301	Open in IMG/M
3300006162\|Ga0075030_100919585	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M
3300006954\|Ga0079219_10940511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300009093\|Ga0105240_10502920	All Organisms → cellular organisms → Bacteria → Acidobacteria	1347	Open in IMG/M
3300009177\|Ga0105248_11866758	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300009521\|Ga0116222_1085293	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300009700\|Ga0116217_10006542	All Organisms → cellular organisms → Bacteria	10096	Open in IMG/M
3300010048\|Ga0126373_10495539	All Organisms → cellular organisms → Bacteria → Acidobacteria	1263	Open in IMG/M
3300010358\|Ga0126370_10841245	All Organisms → cellular organisms → Bacteria → Acidobacteria	822	Open in IMG/M
3300010373\|Ga0134128_10789130	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300010379\|Ga0136449_101508244	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300010398\|Ga0126383_11965786	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300010398\|Ga0126383_12439813	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300012354\|Ga0137366_11223606	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300012924\|Ga0137413_10313763	All Organisms → cellular organisms → Bacteria → Acidobacteria	1100	Open in IMG/M
3300012958\|Ga0164299_11006882	Not Available	614	Open in IMG/M
3300012971\|Ga0126369_12848310	Not Available	566	Open in IMG/M
3300012988\|Ga0164306_11083078	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300013105\|Ga0157369_10233893	All Organisms → cellular organisms → Bacteria → Acidobacteria	1921	Open in IMG/M
3300014152\|Ga0181533_1179775	All Organisms → cellular organisms → Bacteria → Acidobacteria	835	Open in IMG/M
3300014199\|Ga0181535_10319655	Not Available	922	Open in IMG/M
3300014489\|Ga0182018_10293363	Not Available	886	Open in IMG/M
3300014489\|Ga0182018_10611093	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300014492\|Ga0182013_10005472	All Organisms → cellular organisms → Bacteria	14755	Open in IMG/M
3300014496\|Ga0182011_10871511	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300014501\|Ga0182024_10763347	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	1184	Open in IMG/M
3300014502\|Ga0182021_11188992	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300014638\|Ga0181536_10208399	All Organisms → cellular organisms → Bacteria → Acidobacteria	967	Open in IMG/M
3300014839\|Ga0182027_11368645	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300015371\|Ga0132258_13590783	All Organisms → cellular organisms → Bacteria → Acidobacteria	1061	Open in IMG/M
3300015373\|Ga0132257_100995026	Not Available	1055	Open in IMG/M
3300016387\|Ga0182040_11796724	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300017940\|Ga0187853_10142381	All Organisms → cellular organisms → Bacteria → Acidobacteria	1153	Open in IMG/M
3300017996\|Ga0187891_1201730	Not Available	679	Open in IMG/M
3300018019\|Ga0187874_10250708	All Organisms → cellular organisms → Bacteria → Acidobacteria	726	Open in IMG/M
3300018026\|Ga0187857_10269050	Not Available	782	Open in IMG/M
3300018033\|Ga0187867_10816465	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300018037\|Ga0187883_10559951	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300018060\|Ga0187765_10749836	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300019082\|Ga0187852_1109207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1209	Open in IMG/M
3300019082\|Ga0187852_1179006	All Organisms → cellular organisms → Bacteria → Acidobacteria	884	Open in IMG/M
3300020579\|Ga0210407_10656502	All Organisms → cellular organisms → Bacteria → Acidobacteria	815	Open in IMG/M
3300021401\|Ga0210393_10188766	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1664	Open in IMG/M
3300021403\|Ga0210397_10782871	All Organisms → cellular organisms → Bacteria → Acidobacteria	736	Open in IMG/M
3300021405\|Ga0210387_11387948	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300025898\|Ga0207692_10690958	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300025909\|Ga0207705_10684320	All Organisms → cellular organisms → Bacteria → Acidobacteria	797	Open in IMG/M
3300025913\|Ga0207695_11344522	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300025921\|Ga0207652_11890282	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300025928\|Ga0207700_11962515	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300025929\|Ga0207664_10172322	All Organisms → cellular organisms → Bacteria → Acidobacteria	1853	Open in IMG/M
3300027911\|Ga0209698_10777257	All Organisms → cellular organisms → Bacteria → Acidobacteria	725	Open in IMG/M
3300028747\|Ga0302219_10258258	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300028775\|Ga0302231_10526084	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300028798\|Ga0302222_10155100	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	902	Open in IMG/M
3300029910\|Ga0311369_10495087	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1040	Open in IMG/M
3300029910\|Ga0311369_11165353	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300029913\|Ga0311362_10438369	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300029922\|Ga0311363_10961448	Not Available	756	Open in IMG/M
3300029951\|Ga0311371_11802952	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300030007\|Ga0311338_10102610	All Organisms → cellular organisms → Bacteria → Acidobacteria	3551	Open in IMG/M
3300030057\|Ga0302176_10377703	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300030399\|Ga0311353_10351628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1337	Open in IMG/M
3300030737\|Ga0302310_10311249	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	883	Open in IMG/M
3300031028\|Ga0302180_10255744	All Organisms → cellular organisms → Bacteria → Acidobacteria	918	Open in IMG/M
3300031231\|Ga0170824_109706523	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300031234\|Ga0302325_11764456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	778	Open in IMG/M
3300031525\|Ga0302326_10132906	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4336	Open in IMG/M
3300031525\|Ga0302326_10896943	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	1261	Open in IMG/M
3300031708\|Ga0310686_118715225	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	1407	Open in IMG/M
3300031708\|Ga0310686_119151302	All Organisms → cellular organisms → Bacteria	3150	Open in IMG/M
3300031902\|Ga0302322_102771005	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300031912\|Ga0306921_11677584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	688	Open in IMG/M
3300031938\|Ga0308175_100135276	All Organisms → cellular organisms → Bacteria → Acidobacteria	2339	Open in IMG/M
3300031938\|Ga0308175_102960251	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300031939\|Ga0308174_10336521	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1200	Open in IMG/M
3300031954\|Ga0306926_12967293	Not Available	508	Open in IMG/M
3300031962\|Ga0307479_12063974	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300031996\|Ga0308176_12643293	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300032076\|Ga0306924_11569885	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300032076\|Ga0306924_11647886	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300032160\|Ga0311301_10855907	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300032160\|Ga0311301_11678863	All Organisms → cellular organisms → Bacteria → Acidobacteria	766	Open in IMG/M
3300032261\|Ga0306920_103240210	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300032829\|Ga0335070_11139995	Not Available	717	Open in IMG/M
3300032895\|Ga0335074_11153561	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300032897\|Ga0335071_10167618	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300033004\|Ga0335084_10940824	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300033405\|Ga0326727_10288268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1635	Open in IMG/M
3300033493\|Ga0316631_10181855	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300033513\|Ga0316628_104361655	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300033755\|Ga0371489_0002268	All Organisms → cellular organisms → Bacteria	26038	Open in IMG/M
3300033824\|Ga0334840_064950	All Organisms → cellular organisms → Bacteria → Acidobacteria	1058	Open in IMG/M
3300033824\|Ga0334840_142175	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300034163\|Ga0370515_0051013	All Organisms → cellular organisms → Bacteria → Proteobacteria	1823	Open in IMG/M
3300034163\|Ga0370515_0398293	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.51%
Host-Associated	Host-Associated	8.49%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.42%
Aquatic	Environmental → Aquatic	15.09%
Plants	Host-Associated → Plants	8.49%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.60%
Peat	Environmental → Terrestrial → Peat	19.81%
Freshwater	Environmental → Aquatic → Freshwater	11.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.60%
Sediment	Environmental → Aquatic → Sediment	3.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.08%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	19.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.09%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.32%
Loam	Environmental → Terrestrial → Soil → Loam	9.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	19.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.04%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.32%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.49%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.77%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.94%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.21%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.66%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.72%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.83%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.89%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.89%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.89%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.89%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.89%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.94%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.94%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1010166001	3300004092	Bog Forest Soil	MPTDENAIGRRTLLGTGAAVAGLGLLADLEAYPQNVNRNS
Ga0070658_108755891	3300005327	Corn Rhizosphere	MSTRENAIRRRSFLSMGATAAGLGLLSDLEAYPQNVNRNS
Ga0070661_1005474201	3300005344	Corn Rhizosphere	MSANKNAIGRRSFLRTGAAAAGLGLLADLEAYPQNVNRNSSPSDLKI
Ga0070714_1004201351	3300005435	Agricultural Soil	MSTNENAFGRRSLLRKGAAAAGLSLLADLEAYPQNVNRNS
Ga0070684_1006450431	3300005535	Corn Rhizosphere	MSRNENGIGRRSLLKTGAAALGLGLLADLEAYPQNVNRNSNPS
Ga0066903_1008842711	3300005764	Tropical Forest Soil	MATKDNEIGRRLLLGTGAAAAGLGLLADLEAYPQNVNRSSSPSDLKITDMRIAV
Ga0066903_1039663021	3300005764	Tropical Forest Soil	MSTKENEIGRRSLLSKGAAAAGLGLLADLEAYPQNVN
Ga0070766_111743752	3300005921	Soil	MSKEENAIGRRALLGTGAAVAGLGLLADLDAYPQNVNRNSIPSDLKV
Ga0070717_112783001	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSSTNHLGRRSFLKMGGVAASLGILDDLEAYPQNVNRNSKPSDLK
Ga0075029_1000019131	3300006052	Watersheds	MASKQSLFGRRSFLKKGGMAAGLGLLADLEAYPQNVNRNS
Ga0075029_1000260005	3300006052	Watersheds	MSKEENAIGRRALLGTGAAVAGLGLLADLEAYPQNVNRNSIP
Ga0075030_1009195851	3300006162	Watersheds	MSTKENAIGRRSLLSMGAAAAGLGLLADLEAYPQNVNRNSIPSDLKITDMR
Ga0079219_109405112	3300006954	Agricultural Soil	MSSKNLFGRRSFLKKGGMAAGLGLLADLEAYPQNVNRNSKP
Ga0105240_105029201	3300009093	Corn Rhizosphere	MFTKGNTIGRRSFLGMGAAAALGLWADLEAYPQNVNRNSSPSDLKITDM
Ga0105248_118667582	3300009177	Switchgrass Rhizosphere	MSSNESFFGRRSFLKKGGMAAGIGLFADLEAYPQNVNRNS
Ga0116222_10852933	3300009521	Peatlands Soil	MSTKENAIGRRLLLGTGAAAAGLGLLADLEAYPQNVNRNSIPSDLKVTDMRIA
Ga0116217_100065421	3300009700	Peatlands Soil	MSIEENAIGRRSLLRRGATAAGLGLLADLEAYPQNVNRNSLPSDLKVTDMRIAV
Ga0126373_104955391	3300010048	Tropical Forest Soil	MSKEENAIGRRAFLSTGAAVAGLGLLADLEAYPQNVNRNSLPSDLKITD
Ga0126370_108412452	3300010358	Tropical Forest Soil	MSTKENEIGRRSLLSKGAAAAGLGLLADLEAYPQNVNRNS
Ga0134128_107891301	3300010373	Terrestrial Soil	MSRNENGIGRRSLLKTGAAALGLGLLADLEAYPQNVNRNSSPSDLK
Ga0136449_1015082443	3300010379	Peatlands Soil	MTSKNNLFGRRSFLKTGGMAAGLGLLTDLEAYPQNVNRNSKPSDLKIT
Ga0126383_119657861	3300010398	Tropical Forest Soil	MSKEENAIGRRTLLGTGAAVAGLGLLADLEAYPQNVNRNSIPSDLKVTDMRIA
Ga0126383_124398131	3300010398	Tropical Forest Soil	MSTKENAIGRRALLGTGAAAAGLGLLADLDAYPQNVNRNSIPSDLKVTDMR
Ga0137366_112236061	3300012354	Vadose Zone Soil	MSSKNNLVGRRSFLKTGGMAAGLGLFTDLEAYPQNVNRNSKPSDLK
Ga0137413_103137631	3300012924	Vadose Zone Soil	MSTKIGRRSFLSMGAAAAGLGLFADLEAYPQNVNRNSIAS
Ga0164299_110068822	3300012958	Soil	MSTDENAIGRRLLLGTGAAAAGLGLLAELEAYPQNVNR
Ga0126369_128483101	3300012971	Tropical Forest Soil	MSKEENAIGRRALLGTGAAVAGLGLLADLEAYPQNVN
Ga0164306_110830782	3300012988	Soil	MSRNENGIGRRSLLKRGAAALGLGLLADLEAYPQNVNRKSSPSDLKIT
Ga0157369_102338931	3300013105	Corn Rhizosphere	MSKDENAIGRRTLLGTGAAVAGLGLLADLEAYPQNVNRSSIPSDLKITDMRIAV
Ga0181533_11797751	3300014152	Bog	MSTKENAIGRRSLLSTGAAAAGLGLLADLDAYPQNVNRNSIPSDLKVT
Ga0181535_103196552	3300014199	Bog	MSTNENAIGRRALLGTGAAVAGLGLLADLEAYPQNV
Ga0182018_102933632	3300014489	Palsa	MSTKGSTIGRRKFLGMGAAAAGLGLWADLEAYPQNVN
Ga0182018_106110931	3300014489	Palsa	MSTKIGRRSFLSMGAAAAGIGLLADLEAYPQNVNRNSIPSDLKITDMRI
Ga0182013_1000547212	3300014492	Bog	MSTKENAIGRRALLGTGAAVAGLGLLADLEAYPQNV
Ga0182011_108715111	3300014496	Fen	MSKEENAFGRRSLLMAGATAAGLGLLADVEAYPQNVNRNSLPSDLKVTD
Ga0182024_107633472	3300014501	Permafrost	MSTKNAVGRRSFLKMGAAAAGLGLWADLEAYPQNV
Ga0182021_111889921	3300014502	Fen	MSIEENAIGRRSLLRSGATAAGLGLLADLEAYPQNVNRN
Ga0181536_102083992	3300014638	Bog	MFTKENAIGRRSLLSTGAAAAGLGLLADLEAYPQNVNRNSIPSDLKVTDMR
Ga0182027_113686451	3300014839	Fen	MSTNENAIGRRSLLSTGAAAAGLGLLADLEAYPQNVNRNSIPSDLKVTDMR
Ga0132258_135907831	3300015371	Arabidopsis Rhizosphere	MSTDENAIGRRLLLGTGAAAAGLGLLAELEAYPQNVNRSSSPSDLKIT
Ga0132257_1009950261	3300015373	Arabidopsis Rhizosphere	MSTNENAIGRRLLLGTGAAAAGLGLLAELEAYPQNVNRN
Ga0182040_117967242	3300016387	Soil	MSKEENAIGRRALLSTGAAVAGLGLSADLEAYPQNVNRNSIPSDLKITDMR
Ga0187853_101423811	3300017940	Peatland	MFTKENAIGRRSLLSTGAAAAGLGLLADLEAYPQN
Ga0187891_12017302	3300017996	Peatland	MSSKEDLLGRRSFLTKGGMVAGAGLLADLEAYPQNVNRNSQPSDLKITDM
Ga0187874_102507081	3300018019	Peatland	MSTKENTIGRRSLLTTGAAAAGLGLLADLEAYPQNVNR
Ga0187857_102690501	3300018026	Peatland	MSIDENAIGRRSLLRRGATAAGLGLLADLEAYPQN
Ga0187867_108164652	3300018033	Peatland	MATNENTIGRRSLLTTGAAAAGLGLLADLEAYPQNVNRNSIPSDLRV
Ga0187883_105599512	3300018037	Peatland	MSTKENAIGRRALLGTGAAVAGLGLLADLEAYPQDVNRNSIPSDLKV
Ga0187765_107498361	3300018060	Tropical Peatland	MSKEENAIGRRTLLGTGAAVAGLGLLADLEAYPQNVNRNSIPSDLK
Ga0187852_11092072	3300019082	Peatland	MSSKEDLLGRRSFLKTGGMAAGVGILGELEAYPQNVNRNSQP
Ga0187852_11790063	3300019082	Peatland	MFTKENAIGRRSLLSTGAAAAGLGLLADLEAYPQNVNRNSIPSDL
Ga0210407_106565021	3300020579	Soil	MSTKENAIGRRSLLSTGAAVAGLGLLTDLEAYPQDVNRNSIPSDLKIT
Ga0210393_101887663	3300021401	Soil	MSIKIGRRSFLGMGAAAAGLGLWADLEAYPQNVNRNSIA
Ga0210397_107828711	3300021403	Soil	MSTKENAIGRRSLLSTGAAAAGLGLLADLEAYPQNVNR
Ga0210387_113879481	3300021405	Soil	MSTKENAIGRRSLLSTGAAAAGLGLLADLEAYPQDVNRNSIPSDLKV
Ga0207692_106909582	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSSKNNLFGRRSFLKTGGMAAGLGLFTDLEAYPQNVNRNSKPSDLKI
Ga0207705_106843201	3300025909	Corn Rhizosphere	MSTRENAIRRRSFLSMGATAAGLGLLSDLEAYPQNVNRNSIPSDL
Ga0207695_113445221	3300025913	Corn Rhizosphere	MFTKGNTIGRRSFLGMGAAAALGLWADLEAYPQNVNRNSIASDLKITDV
Ga0207652_118902822	3300025921	Corn Rhizosphere	MSKSENAIGRRSLLRMGAAAPGLGLLADLEAYPQNVNRNSSPSDLKIT
Ga0207700_119625151	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSTNENAFGRRSLLRKGAAAAGLSLLADLEAYPQNVNRNSSPSDLKI
Ga0207664_101723221	3300025929	Agricultural Soil	MSTNENAFGRRSLLRKGAAAAGLSLLADLEAYPQNVNRN
Ga0209698_107772573	3300027911	Watersheds	MSTKENAIGRRSLLSMGAAAAGLGLLADLEAYPQNVNRNSIPSD
Ga0302219_102582581	3300028747	Palsa	MSTKENAIGRRSLLSTGAAAAGLGLLADLEAYPQNVNTNSRPSD
Ga0302231_105260842	3300028775	Palsa	MSKKIGRRKFLGMGASAAGFGLLADLEAYPQNVNRNSIPSDLKITD
Ga0302222_101551002	3300028798	Palsa	MSKKIGRRKFLGMGAAAAGFGLLADLEAYPQNVNRNSIPSDL
Ga0311369_104950872	3300029910	Palsa	MSTKIGRRSFLSLGAAAAGLGLFADLEAYPQNVNRNS
Ga0311369_111653531	3300029910	Palsa	MSRKIGRRSFLGMGAGVAGLGLLADLEAYPQNVNRNSIASDLKITD
Ga0311362_104383691	3300029913	Bog	MSTKENAIGRRSLLSSGAAAAGLGLLADLEAYPQDVNRNSIPSDLKVTDMRIA
Ga0311363_109614482	3300029922	Fen	MSTKENAIGRRSLLSTGAAAAGLGLLADLDAYPQNTNTNSRPSDLRVT
Ga0311371_118029521	3300029951	Palsa	MSTKIGRRSFLSLGAATAGLGLFADLEAYPQNVNRNSIASD
Ga0311338_101026105	3300030007	Palsa	MSTKIGRRKFLGMGAAAAGLGLWADLEAYPQSVNRNSIPSDLKITDMRIAVLR
Ga0302176_103777032	3300030057	Palsa	MSTKIGRRSFLSMGAAAAGLGLLADLDAYPQNVNRNSIPSD
Ga0311353_103516283	3300030399	Palsa	MSKKIGRRKFLGMGAAAAGFGLLADLEAYPQNVNRNSIPSDLKI
Ga0302310_103112492	3300030737	Palsa	MSKKIGRRKFLGMGAAAAGFGLLADLEAYPQNVNRNSIPSDLK
Ga0302180_102557443	3300031028	Palsa	MSTKENAIGRRSLLSTGAAAAGLGLLADLEAYPQNVNTNSRPSDLKI
Ga0170824_1097065231	3300031231	Forest Soil	MSTKKNVIGRRKFLGMGAAAAGFGLFADLEAYPQNVKRNSI
Ga0302325_117644563	3300031234	Palsa	MSKKGTIGRRKFLGMGAAAAGLGLWGDLEAYPQNVNRNSIASDLKITD
Ga0302326_101329061	3300031525	Palsa	MSTQGNKIGRRSFLKMGAATAGLGLWADLEAYPQNVNRNSI
Ga0302326_108969431	3300031525	Palsa	MSTKIGRRKFLGMGAAAAGLGLWADLEAYPQNVNRNSIASDLKI
Ga0310686_1187152251	3300031708	Soil	MSKKIGRRSFLGMGAAVAGLGLWADLEAYPQNVNRNSI
Ga0310686_1191513023	3300031708	Soil	MSTKNAIGRRKFLGMGAAAAGLGFLADLEAYPQNVNR
Ga0302322_1027710052	3300031902	Fen	MSIDENAIGRRSLLRKGATAAGLGLLADLEAYPQNVNRNSL
Ga0306921_116775842	3300031912	Soil	MSTKENAIGRRSLLSTGAAAAGLGLLADLEAYPQNVNRNSMPSDLKITD
Ga0308175_1001352761	3300031938	Soil	MFRDENGIGRRSLLKTGAAAVGLGLWADLEAYPQNVNRNSSPSDLKITD
Ga0308175_1029602512	3300031938	Soil	MSRNENGIGRRSLLKTGAAALGLGLLADLEAYPQNVNRNSSPSDLKITD
Ga0308174_103365211	3300031939	Soil	MSTNENAIGRRALLGTGAAVAGLGLLADIEAYPQNVNRNSKPSDL
Ga0306926_129672931	3300031954	Soil	MSTKENAIGRRSLLSTGAAAAGLGLLADLEAYPQNVN
Ga0307479_120639741	3300031962	Hardwood Forest Soil	MSTKIGRRKFLGMGAAAAGLGLLADLEAYPQNVNRNSIASDLKITDM
Ga0308176_126432932	3300031996	Soil	MSTNENAIGRRSLLGTGAAAAGLALLADLEAYPQNVNRNSTPSDLKITDM
Ga0306924_115698851	3300032076	Soil	MSKEENAIGRRALLSTGAAVAGLGLLADLEAYPQNVNRNSIPSDLKITDMRI
Ga0306924_116478861	3300032076	Soil	MNGKTIGRRSFLGMGAAAAGLGLWADLEAYPQNVN
Ga0311301_108559071	3300032160	Peatlands Soil	MSSKNNLFGRRSFLKTGGMAAGLDLFTDLEANPQNVNRN
Ga0311301_116788632	3300032160	Peatlands Soil	MSKEENAIGRRALLGTGAAVAGLGLLADLDAYPQNVNRNSIPSDLKVTDMRIAVLR
Ga0306920_1032402101	3300032261	Soil	MPSNNKLFGRRSFLKAGGVAAGLCLFDDMEAYLQNVNRNSIPSDLKITDMRIA
Ga0335070_111399952	3300032829	Soil	MSTNENALGRRALLGTGAAVAGLGLLADLEAYPQNVN
Ga0335074_111535611	3300032895	Soil	MSTNENAIGRRSLLSTGAAAAGLGLLADLEAYPQNVNRNSS
Ga0335071_101676181	3300032897	Soil	MSKEENAIGRRALLSTGAAVAGLGLLADLDAYPQNV
Ga0335084_109408242	3300033004	Soil	MSTKEDAIGRRTLLTTGAAVAGLGLLADLDAYPQNV
Ga0326727_102882684	3300033405	Peat Soil	MSTKENAIGRRSLLSTGAAAAGLGLLADLEAYPQNVNRNSIPSDLKV
Ga0316631_101818551	3300033493	Soil	MSINGRALGRRSFLKRGAAAAGLGLFADLEAYPQNVNRNS
Ga0316628_1043616551	3300033513	Soil	MFTKEKSFGRRSFLTKGITAAGLGLFADLEAYPQNVNRNSKP
Ga0371489_0002268_25899_26036	3300033755	Peat Soil	MSTKENAIGRRSLLSTGAAAAGLGLLADLEAYPQNVNRNSIPSDLK
Ga0334840_064950_2_151	3300033824	Soil	MSTKENAIGRRSLLSTGAAAAGLGLLADLEAYPQNVNRNSSPSDLKVTDM
Ga0334840_142175_493_636	3300033824	Soil	MSTKENAIGRRALLGTGAAAAGLGLLADLEAYPQNVNRNSSPSDLKVT
Ga0370515_0051013_3_152	3300034163	Untreated Peat Soil	MSTKGRIGRRKFLGMGAAAAGLGLWADLEAYPQNVNRNSIASDLKITDMR
Ga0370515_0398293_420_581	3300034163	Untreated Peat Soil	MSTKENAIGRRSLLSTGAAAAGLGLLADLEAYPQNVNRNSIPSDLKVTDMRIAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F093364

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences