NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F093357

Metagenome Family F093357

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F093357
Family Type Metagenome
Number of Sequences 106
Average Sequence Length 76 residues
Representative Sequence MKKFEQAWRIKRLLAEMGENISSLSRKLNRPFGSVANNIYGYRASAQLQKEIADFLGRPVAELFEGAGPVRG
Number of Associated Samples 84
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 78.30 %
% of genes near scaffold ends (potentially truncated) 24.53 %
% of genes from short scaffolds (< 2000 bps) 84.91 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction Yes
3D model pTM-score0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater
(17.924 % of family members)
Environment Ontology (ENVO) Unclassified
(28.302 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(45.283 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 44.00%    β-sheet: 0.00%    Coil/Unstructured: 56.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.75
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.35.1.2: Phage repressorsd3jxbc_3jxb0.73577
a.35.1.0: automated matchesd3vk0a_3vk00.73452
a.35.1.3: SinR domain-liked1b0na21b0n0.72546
a.35.1.2: Phage repressorsd1neqa_1neq0.71404
a.35.1.2: Phage repressorsd1r69a_1r690.7127


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF01381HTH_3 33.02
PF00717Peptidase_S24 7.55
PF01695IstB_IS21 1.89
PF06574FAD_syn 0.94
PF01343Peptidase_S49 0.94
PF13087AAA_12 0.94
PF07610DUF1573 0.94
PF13538UvrD_C_2 0.94
PF02195ParBc 0.94
PF00589Phage_integrase 0.94
PF07811TadE 0.94
PF05036SPOR 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 1.89
COG1484DNA replication protein DnaCReplication, recombination and repair [L] 1.89
COG0196FAD synthaseCoenzyme transport and metabolism [H] 0.94


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001580|Draft_10003742All Organisms → cellular organisms → Bacteria14984Open in IMG/M
3300002966|JGI24721J44947_10026900All Organisms → cellular organisms → Bacteria5910Open in IMG/M
3300002966|JGI24721J44947_10206731All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans993Open in IMG/M
3300003432|JGI20214J51088_10039875All Organisms → cellular organisms → Bacteria → Proteobacteria3256Open in IMG/M
3300003852|Ga0031655_10044025All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1987Open in IMG/M
3300003858|Ga0031656_10266922All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300003990|Ga0055455_10117664All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans794Open in IMG/M
3300004012|Ga0055464_10160004All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans655Open in IMG/M
3300004063|Ga0055483_10221183All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans618Open in IMG/M
3300004066|Ga0055484_10104591All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria702Open in IMG/M
3300004073|Ga0055516_10023340All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1089Open in IMG/M
3300005145|Ga0068713_1155556All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans665Open in IMG/M
3300005573|Ga0078972_1001157All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans102203Open in IMG/M
3300005645|Ga0077109_1130955All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300007072|Ga0073932_1086520All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1461Open in IMG/M
3300009009|Ga0105105_10956994All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans529Open in IMG/M
3300009037|Ga0105093_10109303All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1343Open in IMG/M
3300009039|Ga0105152_10352803All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans616Open in IMG/M
3300009053|Ga0105095_10169569All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1194Open in IMG/M
3300009078|Ga0105106_10950021All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans611Open in IMG/M
3300009082|Ga0105099_10905386All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria557Open in IMG/M
3300009087|Ga0105107_10926902All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans606Open in IMG/M
3300009091|Ga0102851_11008348All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans906Open in IMG/M
3300009166|Ga0105100_10123517All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1529Open in IMG/M
3300009166|Ga0105100_10772074All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria595Open in IMG/M
3300009167|Ga0113563_10303846All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1656Open in IMG/M
3300009167|Ga0113563_12142198All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans670Open in IMG/M
3300009171|Ga0105101_10227996All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans901Open in IMG/M
3300009503|Ga0123519_10634108All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans561Open in IMG/M
3300010293|Ga0116204_1276895All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans526Open in IMG/M
3300010391|Ga0136847_13429071All Organisms → cellular organisms → Bacteria13135Open in IMG/M
3300013086|Ga0163202_1052984All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans812Open in IMG/M
3300013090|Ga0163209_1016808All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2605Open in IMG/M
3300013092|Ga0163199_1196317All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans792Open in IMG/M
3300013092|Ga0163199_1216405All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans746Open in IMG/M
(restricted) 3300013122|Ga0172374_1102284All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1095Open in IMG/M
(restricted) 3300013122|Ga0172374_1194928All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans736Open in IMG/M
(restricted) 3300013125|Ga0172369_10259908All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans945Open in IMG/M
(restricted) 3300013125|Ga0172369_10526211All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans569Open in IMG/M
(restricted) 3300013136|Ga0172370_10236407All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1105Open in IMG/M
(restricted) 3300013137|Ga0172375_10214615All Organisms → cellular organisms → Bacteria1477Open in IMG/M
(restricted) 3300013138|Ga0172371_10235064All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1509Open in IMG/M
(restricted) 3300013138|Ga0172371_10699071All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans688Open in IMG/M
(restricted) 3300013138|Ga0172371_10912744All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria567Open in IMG/M
3300013392|Ga0180015_1063741All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans580Open in IMG/M
3300014260|Ga0075307_1073926All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans680Open in IMG/M
3300014320|Ga0075342_1216806All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans546Open in IMG/M
3300014490|Ga0182010_10086630All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1550Open in IMG/M
(restricted) 3300014720|Ga0172376_10271887All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1028Open in IMG/M
3300018055|Ga0184616_10081097All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1134Open in IMG/M
3300018055|Ga0184616_10237856All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans688Open in IMG/M
3300018068|Ga0184636_1122545All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans902Open in IMG/M
3300020074|Ga0194113_10179313All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1722Open in IMG/M
3300020074|Ga0194113_10265653All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1323Open in IMG/M
3300020074|Ga0194113_10432358All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans959Open in IMG/M
3300020083|Ga0194111_10013685All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria8452Open in IMG/M
3300020083|Ga0194111_10143682All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1832Open in IMG/M
3300020083|Ga0194111_10582635All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans704Open in IMG/M
3300020084|Ga0194110_10103881All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans2343Open in IMG/M
3300020084|Ga0194110_10520230All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans772Open in IMG/M
3300020109|Ga0194112_10364475All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1062Open in IMG/M
3300020109|Ga0194112_10451023All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans915Open in IMG/M
3300020109|Ga0194112_10637837All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria720Open in IMG/M
3300020603|Ga0194126_10856242All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans513Open in IMG/M
3300022553|Ga0212124_10274753All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans898Open in IMG/M
3300022554|Ga0212093_1248453All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans648Open in IMG/M
3300022556|Ga0212121_10015325All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria7294Open in IMG/M
3300022556|Ga0212121_10636212All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans665Open in IMG/M
3300022650|Ga0236339_1196093All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans786Open in IMG/M
3300022653|Ga0236337_1135521All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1248Open in IMG/M
(restricted) 3300024341|Ga0233421_10107660All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria962Open in IMG/M
3300025135|Ga0209498_1220733All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans677Open in IMG/M
3300025279|Ga0208047_1059769All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1006Open in IMG/M
3300025306|Ga0208045_1111346All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans589Open in IMG/M
3300025307|Ga0208566_1066420All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1136Open in IMG/M
3300027536|Ga0209163_1137505All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans553Open in IMG/M
3300027592|Ga0209270_1038128All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1782Open in IMG/M
3300027841|Ga0209262_10316496All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans760Open in IMG/M
3300027896|Ga0209777_10001229All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria38289Open in IMG/M
3300027897|Ga0209254_10419933All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans986Open in IMG/M
3300027900|Ga0209253_11066655All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans552Open in IMG/M
3300028032|Ga0265296_1005261All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria10740Open in IMG/M
3300028176|Ga0268284_1144515All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans579Open in IMG/M
3300028272|Ga0265592_1070783All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans826Open in IMG/M
3300028735|Ga0272446_1093657All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1074Open in IMG/M
3300029288|Ga0265297_10086266All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans2557Open in IMG/M
3300030000|Ga0311337_10413058All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1144Open in IMG/M
3300030613|Ga0299915_10552456All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans748Open in IMG/M
3300031537|Ga0307419_10335355All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans533Open in IMG/M
3300031726|Ga0302321_101026689All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans940Open in IMG/M
3300031749|Ga0315298_1015031All Organisms → cellular organisms → Bacteria8430Open in IMG/M
3300031949|Ga0214473_11009858All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans878Open in IMG/M
3300032069|Ga0315282_10001700All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria41197Open in IMG/M
3300032069|Ga0315282_10010201All Organisms → cellular organisms → Bacteria14781Open in IMG/M
3300032163|Ga0315281_10124087All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans2960Open in IMG/M
3300032163|Ga0315281_11005153All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans845Open in IMG/M
3300032163|Ga0315281_11481159All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans666Open in IMG/M
3300032163|Ga0315281_11985561All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans556Open in IMG/M
3300032173|Ga0315268_10255749All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1687Open in IMG/M
3300032173|Ga0315268_11518157All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria682Open in IMG/M
3300032342|Ga0315286_10621270All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae1112Open in IMG/M
3300032397|Ga0315287_10482469All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_51_101472Open in IMG/M
3300032401|Ga0315275_10785332All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1056Open in IMG/M
3300033480|Ga0316620_12415525All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans523Open in IMG/M
3300033486|Ga0316624_12111632All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans524Open in IMG/M
3300033489|Ga0299912_10475307All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans1010Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater17.92%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake11.32%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment10.38%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment8.49%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment4.72%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands4.72%
Hot SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring3.77%
Anoxic Lake WaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water2.83%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands2.83%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.83%
Enrichment CultureEngineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enrichment Culture2.83%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.89%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment1.89%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water1.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.89%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.89%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.89%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen1.89%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.94%
Lake SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment0.94%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.94%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater0.94%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater0.94%
FreshwaterEnvironmental → Aquatic → Freshwater → Pond → Sediment → Freshwater0.94%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh0.94%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.94%
Hot Spring Microbial MatEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Microbial Mat0.94%
Microbial MatEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Microbial Mat0.94%
Brackish WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Brackish Water0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.94%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.94%
Landfill LeachateEngineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate0.94%
Hydrocarbon Resource EnvironmentsEngineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments0.94%

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001580Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes from Suncor taillings pond 6 2012TP6_6EngineeredOpen in IMG/M
3300002966Hot spring thermophilic microbial communities from Obsidian Pool, Yellowstone National Park, USA - OP-RAMG-01EnvironmentalOpen in IMG/M
3300003432Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300003852Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HBEnvironmentalOpen in IMG/M
3300003858Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DIEnvironmentalOpen in IMG/M
3300003990Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2EnvironmentalOpen in IMG/M
3300004012Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004063Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLB_D2EnvironmentalOpen in IMG/M
3300004066Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D2EnvironmentalOpen in IMG/M
3300004073Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_CordB_D2EnvironmentalOpen in IMG/M
3300005145Enrichment culture microbial communities om Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKS2 (Arthur Kill Sulfidogenic replicate 2) MetaGEngineeredOpen in IMG/M
3300005573Hot spring thermophilic microbial communities from Obsidian Pool, Yellowstone National Park, USA - OP-RAMG-01 (SPADES assembly)EnvironmentalOpen in IMG/M
3300005645Brackish water microbial communities from Lake Sakinaw in Canada: eDNA_2 (120m)EnvironmentalOpen in IMG/M
3300007072Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Dewar Creek DC9 2012 metaGEnvironmentalOpen in IMG/M
3300009009Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009037Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015EnvironmentalOpen in IMG/M
3300009039Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cmEnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009082Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009166Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009171Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009503Hot spring microbial communities from Yellowstone National Park - Yellowstone National Park OP-RAMG-02EnvironmentalOpen in IMG/M
3300010293Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 52m metaGEnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300013086Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_300mEnvironmentalOpen in IMG/M
3300013090Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_160mEnvironmentalOpen in IMG/M
3300013092Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_150mEnvironmentalOpen in IMG/M
3300013122 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10.3mEnvironmentalOpen in IMG/M
3300013125 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11.25mEnvironmentalOpen in IMG/M
3300013136 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11.5mEnvironmentalOpen in IMG/M
3300013137 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_11.1mEnvironmentalOpen in IMG/M
3300013138 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_12mEnvironmentalOpen in IMG/M
3300013392Groundwater microbial communities from the Olkiluoto Island deep subsurface site, Finland - KR13_S2_MetaGEnvironmentalOpen in IMG/M
3300014260Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1_rdEnvironmentalOpen in IMG/M
3300014320Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300014490Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaGEnvironmentalOpen in IMG/M
3300014720 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35mEnvironmentalOpen in IMG/M
3300018055Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coexEnvironmentalOpen in IMG/M
3300018068Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2EnvironmentalOpen in IMG/M
3300020074Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200mEnvironmentalOpen in IMG/M
3300020083Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300mEnvironmentalOpen in IMG/M
3300020084Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200mEnvironmentalOpen in IMG/M
3300020109Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015016 Mahale Deep Cast 400mEnvironmentalOpen in IMG/M
3300020603Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015035 Kigoma Deep Cast 150mEnvironmentalOpen in IMG/M
3300022553Powell_combined assemblyEnvironmentalOpen in IMG/M
3300022554Dewar_combined assemblyEnvironmentalOpen in IMG/M
3300022556Kivu_combined assemblyEnvironmentalOpen in IMG/M
3300022650Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W3EnvironmentalOpen in IMG/M
3300022653Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W1EnvironmentalOpen in IMG/M
3300024341 (restricted)Freshwater microbial communities from Lake Matano, South Sulawesi, Indonesia - Watercolumn_Matano_2014_107_MGEnvironmentalOpen in IMG/M
3300025135Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep Sediment (SPAdes)EnvironmentalOpen in IMG/M
3300025279Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_220m (SPAdes)EnvironmentalOpen in IMG/M
3300025306Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_200m (SPAdes)EnvironmentalOpen in IMG/M
3300025307Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_150m (SPAdes)EnvironmentalOpen in IMG/M
3300027536Enrichment culture microbial communities om Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKS2 (Arthur Kill Sulfidogenic replicate 2) MetaG (SPAdes)EngineeredOpen in IMG/M
3300027592Enrichment culture microbial communities from Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKS1 (Arthur Kill Sulfidogenic replicate 1) MetaG (SPAdes)EngineeredOpen in IMG/M
3300027841Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)EnvironmentalOpen in IMG/M
3300027896Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)EnvironmentalOpen in IMG/M
3300027897Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300028032Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #1EnvironmentalOpen in IMG/M
3300028176Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2013_06_06_40mEnvironmentalOpen in IMG/M
3300028272Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2010_1_5_120mEnvironmentalOpen in IMG/M
3300028735Hot spring microbial mat communities from Yellowstone National Park, WY, United States - YNP-CB-006-1EnvironmentalOpen in IMG/M
3300029288Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 137-91EngineeredOpen in IMG/M
3300030000I_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300030613Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227EnvironmentalOpen in IMG/M
3300031537Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-30EnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031749Extremophilic microbial mat communities from Washburn Hot Springs, YNP, Wyoming, USA - WHS_1_MGEnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300032069Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20EnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300032173Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_topEnvironmentalOpen in IMG/M
3300032342Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0EnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032401Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0EnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300033489Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Draft_10003742133300001580Hydrocarbon Resource EnvironmentsMERIIQEKMKKFEQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQGESADFLGKPVAKLFGGAGPVRG*
JGI24721J44947_1002690013300002966Hot SpringMIIQEKMKNFEQTWRIKRLLAEKGETISSLSRKLDRPVGSVANNIYGYRANAKLRGEIASFLGHPVKELFEEMR*
JGI24721J44947_1020673123300002966Hot SpringMKNFEQTWRIKRLLAEXGETISSLSRKLDRPVGSVANNIYGYRANSRLQGEIAAFLGHSVKELFEEMR*
JGI20214J51088_1003987523300003432WetlandMKNFEQAWRIKKLLAEMGENISSLARKLNRPFGSVANNIYGYRTNAQLRGEIAAFLGLPAAEIFEGEARTEGR*
Ga0031655_1004402523300003852Freshwater Lake SedimentMKNLEQTFRIKRLLAERGESISSMARKLDAPFGSVANNVYGYRGNPELRDRIAGFLGQPVAALFGGNGDQV*
Ga0031656_1026692223300003858Freshwater Lake SedimentMKKFEQAWRIKRLLAESGETISSLSXKLNXPFGSVANNIYGYRANDRLQGEIAAFLGRPVAELFEGEGQTGGR*
Ga0055455_1011766423300003990Natural And Restored WetlandsMKKFEQAWRIKRLLAEMGENISSLSRKLNRPFGSVANNIYGYRASAQLQKEIADFLGRPVAELFEGAGPVRG*
Ga0055464_1016000423300004012Natural And Restored WetlandsMKKFDQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQKEIADFLGKSVEELFGGASPVRG*
Ga0055483_1022118323300004063Natural And Restored WetlandsMKKFDQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRTNAQLRGEIAKFLGCGVGELFEDDIYKSRNQA*
Ga0055484_1010459113300004066Natural And Restored WetlandsMKKFDQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRTNTQLRVEIADFLGKPVVELFEHDAKASG*
Ga0055516_1002334013300004073Natural And Restored WetlandsMKKFEQAWRIKRLLAEMGENISSLSRKLNRPFGSVANNIYGYRASAQLQKEIADFLGRPVAELFEGA
Ga0068713_115555613300005145Enrichment CultureMERIIQKKMKKFDQAWRIKRLLAERGETISSLSRKIDRPCGSVANNIYGYRANTNLQKEIAAFLGQPVTEIFENAGLQAGR*
Ga0078972_100115793300005573Hot SpringMKNFEQTWRIKRLLAERGETISSLSRKLDRPVGSVANNIYGYRANAKLRGEIASFLGHPVKELFEEMR*
Ga0077109_113095513300005645Brackish WaterMERIIQEKMKNFEQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQGEIADFLGKPVAKLFGGAGPVRG*
Ga0073932_108652023300007072Hot Spring SedimentMERIIQRKMKNFEQAFRSKRLLAEMGENISSLARKLKRPFGSVANNIYGYRANAKLRGEIASFLGHPVKELFEEMGLAPRR*
Ga0105105_1095699423300009009Freshwater SedimentVERIIQKKMKKFEQAWRIKRLLAEMGENISSLSRKLNRPFGSVANNIYGYRANAQLQKEIADFLGKSVEELFG
Ga0105093_1010930323300009037Freshwater SedimentVERIIQKKMKKFEQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQKEIADFLGKSLEELFGGASPVRG*
Ga0105152_1035280313300009039Lake SedimentVERIIQKKMKNFEQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQREIADFLGKPVAKLFGGAGPVRE*
Ga0105095_1016956923300009053Freshwater SedimentVERIIQKKMKKFDQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRASAQLQKEIADFLGRPVAELFEGAGPVRG*
Ga0105106_1095002113300009078Freshwater SedimentVERIIQKKMKKFDQAWQIKRFLAERAESISSLSRKLNRPFVSVANNIYEYRASAQLQKEIADFLGRPVAELFEGAAPVRG*
Ga0105099_1090538613300009082Freshwater SedimentHKERIIQKKMKKFEQAWRIKRLLAESGETISSLSRKLNRPFGSVANNIYGYRANDRLQGEIAAFLRRPVAELFEGEGQTGGR*
Ga0105107_1092690213300009087Freshwater SedimentVERIIQKKMKKFDQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQKEIADFLGKSLEELFGGASP
Ga0102851_1100834823300009091Freshwater WetlandsMKKFEQAWRIKRLLAESGETISSLSRKLNRPFGSVANNIYGYRANDRLQGEIAAFLGRPVAELFEGEGQTGGR*
Ga0105100_1012351723300009166Freshwater SedimentVERIIQKKMKKFDQAWQIKRFLAERAESISSLSRKLNRPFGSVANNIYGYRASAQLQKEIADFLGRPAAELFEGAGPVRG*
Ga0105100_1077207413300009166Freshwater SedimentKKFEQAWRIKRLLAESGETISSLSRKLNRPFGSVANNIYGYRANDRLQGEIAAFLRRPVAELFEGEGQTGGR*
Ga0113563_1030384643300009167Freshwater WetlandsWRIKRLLAEMGENISSLSRKLNRPFGSVANNIYGYRASAQLQKEIADFLGRPVAELFEGAGPVRG*
Ga0113563_1214219823300009167Freshwater WetlandsMKKFEQAWRIKRLLAESGETISSLSRKLNRPFGSVANNIYGYRANDRLQGEIAAFLGLPVAELFEGEGQTGGR*
Ga0105101_1022799613300009171Freshwater SedimentVERIIQKKMKKFEQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRASAQLQIEIADFLGKSVEELFGGASPVRG*
Ga0123519_1063410813300009503Hot SpringQTWRIKRLLAEKGETISSLSRKLDRPVGSVANNIYGYRANGKLRGEIAAFLGHPVKELFKEMG*
Ga0116204_127689523300010293Anoxic Lake WaterMKKFEQAWRIKRLLAESGETISSLSRKLNRPFGSVANNIYGCRANDRLQKEIAAFLGKSAAELFEGEIQTDGR*
Ga0136847_1342907133300010391Freshwater SedimentVERIIQKKMKNFEQTWRIKRLLAEKGETISSLSRKLDRPVGSVANNIYGYRANVRLQEEIAGFLGQPVAELFEVEAKAIGR*
Ga0163202_105298413300013086FreshwaterEQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQREIADFLGKPVAKLFGGAGPVRG*
Ga0163209_101680833300013090FreshwaterMERIIQIKMKNFEQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQGEIADFLEKPVAKLFRGSGPVGG*
Ga0163199_119631723300013092FreshwaterMERIIQRKMKKFDQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRTNAQLRGEIAKFLGCGVGELFEGDIHKSMN
Ga0163199_121640513300013092FreshwaterMERIIQEKMKNFEQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQREIADFLGKPVAKLFGGAGPVRG*
(restricted) Ga0172374_110228423300013122FreshwaterMKKFEQAWRIKRLLAEMGENISSLSRKLNRPFGSVANNIYGYRASAQLQREIADFLGRPVAELFEGAGPSAAK*
(restricted) Ga0172374_119492823300013122FreshwaterVERIIQRKMKKFEQAWRIKRLLAEMGENISSLSRKLNRPFGSVANNIYGYRASAQLQREIADFLGKPVAEIFEGASPSAAK*
(restricted) Ga0172369_1025990823300013125FreshwaterVERIIQKKMKKFEQAWRIKRLLAEMGENISSLSRKLNRPFGSVVNNIYGYRASAQLQREIADFLERPVAELFEGASPSAAK*
(restricted) Ga0172369_1052621123300013125FreshwaterVERIIQKKMKKFEQAWRIKRLLAEMGENISSLSRKLNRPFGSVANNIYGYRVSAQLQREIADFLGKPVAESVEGASPSAAK*
(restricted) Ga0172370_1023640723300013136FreshwaterVERIIQRKMKKFEQAWRIKRLLAEMGENISSLSRKLNRPFGSVANNIYGYRASAQLQREIADFLERPVA*
(restricted) Ga0172375_1021461523300013137FreshwaterVERIIQKKMKKFEQAWRIKRLLAEMGENISSLSRKLNRPFGSVANNIYGYRASAQLQKEIADFLGRPVAELFEGAGPVRG*
(restricted) Ga0172371_1023506423300013138FreshwaterMKKFEQAWRIKRLLAEMGENISSLSRKLNRPFGSVANNIYGYRASAQLQREIADFLGKPVAEIFEGASPSAAK*
(restricted) Ga0172371_1069907123300013138FreshwaterVERIIQKKMKKFEQAWRIKRLLAEMGENISSLSRKLNRPFGSVANNIYGYRASAQLQREIADF
(restricted) Ga0172371_1091274413300013138FreshwaterMERIIQKKMKNFEQAWRIKRLLAEMGENISSLARKLNRPFGSVANNIYGYRANAQLRGEIATFLGRPTAELFEGEVQTGRR*
Ga0180015_106374123300013392GroundwaterMERIIQKKMKNFEQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQREIADFLGKPVAKLFGGAGPVRG*
Ga0075307_107392623300014260Natural And Restored WetlandsVERIIQKKMKKFDQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRTNAQLQGESAKFLGCGVGELFEYDIYKSRNQA
Ga0075342_121680613300014320Natural And Restored WetlandsHVERIIQKKMKKFEQAWRIKRLLAEMGENISSLSRKLNRPFGSVANNIYGYRASAQLQKEIADFLGRPVAELFEGAGPVRG*
Ga0182010_1008663043300014490FenVERIIQRKMKKFDQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRTNAQLRGEIAKFLGCGVGELFEGDIHKSRNQA*
(restricted) Ga0172376_1027188713300014720FreshwaterMERIIQIKMKNFEQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQGEIADFLEKPV
Ga0184616_1008109723300018055Groundwater SedimentMKKFDQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRTNAQLRGEIAKFLGCGVGELFEGDIHKSRNQA
Ga0184616_1023785623300018055Groundwater SedimentMKNFEQTWRIKRLLAEKGETISSLSRKLDRPVGSVANNIYGYRANVRLQEEIAGFLGQPVAELFEVEAEAIGR
Ga0184636_112254523300018068Groundwater SedimentMERIIQRKMKKFDQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRTNAQLRGEIAKFLGCGVGELFEGDIHKSRNQA
Ga0194113_1017931323300020074Freshwater LakeMKNFEQAWRIKRLLAEMGENISSLARKLNRPFGSVANNIYGYRANAQLRGEIASFLGHPVKELFEGEGRADGR
Ga0194113_1026565323300020074Freshwater LakeMKNFEQTWRIKRLLAEKGETISSLSRKLDRPVGSVANNIYGYRANAKLRGEIASFLGHPVKELFEGEVQPGRR
Ga0194113_1043235823300020074Freshwater LakeMKNFEQTWRIKRLLAEMGENISSLARKLNRPFGSVANNIYGYRANAQLRGEIASFLGHPVKELFEGEVQTGRR
Ga0194111_1001368553300020083Freshwater LakeMKKFEQAWRIKRLLAESGETISSLSRKLNRPFGSVANNIYGYRANDRLQREIAAFLGKSATELFEGEIQTDGR
Ga0194111_1014368223300020083Freshwater LakeMKNFEQTWRIKRLLAEKGETISSLSRKLDRPVGSVANNIYGYRANAKLQGEIASFLGHPVKELFEEMR
Ga0194111_1058263523300020083Freshwater LakeVERIIQKKMKNFEQTWRIKRLLAEKGETISSLSRKLDRPVGSVANNIYGYRANVRLQEEIAGFLGQPVAELFEIEAKAIGR
Ga0194110_1010388143300020084Freshwater LakeNFEQTWRIKRLLAEKGETISSLSRKLDRPVGSVANNIYGYRANVRLQEEIAGFLGQPVAELFEVEAQAIGR
Ga0194110_1052023023300020084Freshwater LakeMKNFEQTWRIKRLLAEKGETISSLSRKLDRPVGSVANNIYGYRANLRLQGEIAAFLGHPV
Ga0194112_1036447533300020109Freshwater LakeERIIQKKMKNFEQTWRIKRLLAEKGETISSLSRKLDRPVGSVANNIYGYRANLRLQGEIAAFLGHPVKELFEEMR
Ga0194112_1045102323300020109Freshwater LakeMKNFEQTWRIKRLLAEKGETISSLSRKLDRPVGSVANNIYGYRANVRLQEEIAGFLGQPVAELFEIEAKAIGR
Ga0194112_1063783713300020109Freshwater LakeKMKNFEQTWRIKRLLAEMGENISSLARKLNRPFGSVANNIYGYRANAQLRGEIASFLGHPVKELFEGEVQTGRR
Ga0194126_1085624223300020603Freshwater LakeMKNFEQTWRIKRLLAEMGENISSLARKLNRPFGSVANNIYGYRANAQLRGEIASFLGHPVKELFEGEV
Ga0212124_1027475313300022553FreshwaterMKNFEQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQGEIADFLGKPVAKLFGGAGPVRG
Ga0212093_124845323300022554Hot Spring SedimentMERIIQRKMKNFEQAFRSKRLLAEMGENISSLARKLKRPFGSVANNIYGYRANAKLRGEIASFLGHPVKELFEEMGLAPRR
Ga0212121_1001532573300022556Anoxic Lake WaterMKNFEQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQGEIADFLEKPVAKLFRGSGPVGG
Ga0212121_1063621223300022556Anoxic Lake WaterMKNFEQAWRIKRLLAEMGENISSLARKLNRPFGSVANNIYGYRASAQLQREIADFLGRPVAELFEGAGPSAAK
Ga0236339_119609323300022650FreshwaterMERIIQRKMKKFDQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRTNAQLRGEIAKFLGCGVGELFEDDIYKSRNQA
Ga0236337_113552123300022653FreshwaterVERIIQKKMKKFDQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRTNAQLRGEIAKFLGCGVGELFEDDIYKSRNQA
(restricted) Ga0233421_1010766013300024341FreshwaterMKNFEQTWRIKRLLAEKGETISSLSRKLDRPVGSVANNIYGYRANAQLQAEIAGFLGQPVPELFEAEAKAIGR
Ga0209498_122073323300025135SedimentMKNFEQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQGEIADFLGKPVAKLFGGAGPVR
Ga0208047_105976923300025279FreshwaterMERIIQIKMKNFEQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQGEIADFLEKPVAKLFRGSGPCGGIVCDGRQTK
Ga0208045_111134613300025306FreshwaterMERIIQEKMKNFEQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQGEIADFLGKPVAKLFGGAGPVRG
Ga0208566_106642013300025307FreshwaterMERIIQDKMKNFEQAWQIKRFLAEMGESISSLSRKLNRPFGSVANNIYGYRANAQLQGEIADFLGKPVAKLFGGAGPVRG
Ga0209163_113750513300027536Enrichment CultureMERIIQKKMKKFDQAWRIKRLLAERGETISSLSRKIDRPCGSVANNIYGYRANTNLQKEIAAFLGQPVTEIFENAGLQAGR
Ga0209270_103812823300027592Enrichment CultureMKKFDQAWRIKRLLAERGETISSLSRKIDRPCGSVANNIYGYRANTNLQKEIAAFLGQPVTEIFENAGLQAGR
Ga0209262_1031649623300027841FreshwaterMKKFEQAWRIKRLLAESGETISSLSRKLNRPFGSVANNIYGYRANDRLQGEIAAFLGRPVAELFEGEGQTGGR
Ga0209777_10001229213300027896Freshwater Lake SedimentMKNLEQTFRIKRLLAERGESISSMARKLDAPFGSVANNVYGYRGNPELRDRIAGFLGQPVAALFGGNGDQV
Ga0209254_1041993323300027897Freshwater Lake SedimentMERIIQEKMKNFEQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQGEIADFLGKPVAKLFGGAGPSPGR
Ga0209253_1106665523300027900Freshwater Lake SedimentMKKFEQAWRIKRLLAEMGENISSLSRKLNRPFGSVANNIYGYRASAQLQKEIADFLGRPVAELFEGAGPVRG
Ga0265296_1005261103300028032GroundwaterMKKFDQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRTNAQLRGEIAKFLGCGVGELFEGDISSSRNQA
Ga0268284_114451523300028176Saline WaterVERIIQKKMKKFDQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQKEIADFLGKSVEELFGGASPVRG
Ga0265592_107078313300028272Saline WaterRIIQEKMKNFEQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQGEIADFLGKPVAKLFGGAGPVRG
Ga0272446_109365723300028735Microbial MatMIIQKKMKNFEQTWRIKRLLAEKGETISSLSRKLDRPVGSVANNIYGYRANSRLQGEIAAFLGHPVKELFEEMR
Ga0265297_1008626623300029288Landfill LeachateMKKFDQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRTNTQLRVEIADFLGKPVTELFEHDAKASGQ
Ga0311337_1041305813300030000FenMKKFDQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRTNARLRGEIAKFLGCGVGELFEGDIHNSRNQA
Ga0299915_1055245613300030613SoilMERIIQRKMKKFDQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRTNAQLRGEIAKFLGCGVGELFEGDISNSRNQA
Ga0307419_1033535513300031537Salt MarshVERIIQKKMKKFEQAWRIKRLLAEMGENISSLSRKLNRPFGSVANNIYGYRASAQLQKEISDFLGRPVAELFEPGGPSAAK
Ga0302321_10102668913300031726FenKKFDQAWRIKRLLAERGETISSLSRKLDRPCGSGANNIYGYRTNAQLRGEIAKFLGCGVGELFEGDIHKSRNQA
Ga0315298_101503153300031749Hot Spring Microbial MatMKNFEQTWRIKRLLAEKGETISSLSRKLDRPVGSVANNIYGYRANAKLRGEIASFLGHPVKELFEEMR
Ga0214473_1100985823300031949SoilMERIIQRKMKKFDQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRTNAQLRGEIAKFLGCGVGELFEDDICQSRNQA
Ga0315282_1000170063300032069SedimentMKKFDQAWRIKRLLAEMGENISSLSRKLNRPFGSVANNIYGYRASAQLQREIADFLGKPVAELFEAAGPSAAK
Ga0315282_1001020193300032069SedimentVERIIQRKMKKFDQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRTNAQLRGEIAKFIGCGVGELFEGDINKSRKQA
Ga0315281_1012408723300032163SedimentMERIIQRKMKKFDQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRTNAQLRGEIAKFLGCGVGELFEADIHKSRKQA
Ga0315281_1100515323300032163SedimentMERIIQRKMKKFDQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRSNAQLRGEIAKFLGCGVGELFEGDIHKSRNHA
Ga0315281_1148115913300032163SedimentMKKFDQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRTNAQLREEIAKFLGCGVGELFEGDIHKSRNQA
Ga0315281_1198556123300032163SedimentMERIIQKKMKKFEQAWRIKRLLAEKSETISSLSRKINRPFGSVANNIYGYRTNTQLQEEIAYFLGRPVVELFEAEGKAIGQ
Ga0315268_1025574923300032173SedimentMKKFEQAWRIKRLLAEKSETISSLSRKINRPFGSVANNIYGYRTNTQLQEEIAYFLGRPVVELFEAEGKAIGQ
Ga0315268_1151815713300032173SedimentQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRTNAQLRGEIAKFLGCGVGELFEGDIHKSRNQA
Ga0315286_1062127033300032342SedimentMERIIQEKMKNFEQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQREIADFLGKPVAELFGGAEPVRG
Ga0315287_1048246913300032397SedimentEKMKNFEQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQGEIADFLGKPVAKLFGGAGPSPGR
Ga0315275_1078533233300032401SedimentMKKFEQAWQIKRLLAEMGENISSLSRKLNRPFGSVANNIYGYRSNAQLQKEIADFLEKPVAELFEGVGFVRG
Ga0316620_1241552513300033480SoilFDQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRTNTQLRVEIADFLGKPVTELFEHDAKASGQ
Ga0316624_1211163223300033486SoilMKKFEQAWQIKRLLAEMGENISSLSRKLNRPFGSVANNIYGYRASAQLQKEIADFLGRPVAELFEGAGPVRG
Ga0299912_1047530723300033489SoilMERIIQRKMKKFDQAWRIKRLLAERGETISSLSRKLDRPCGSVANNIYGYRTNAQLRGEIAKFLGCGVGELFEGDICSSRNQ


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