Metagenome / Metatranscriptome Family F093243

Basic Information
Family ID	F093243
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	44 residues
Representative Sequence	MLLSYIPTEDQDADILTKALTRSKFEYHRGRIGVADNPYLVEREC
Number of Associated Samples	49
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	64.15 %
% of genes near scaffold ends (potentially truncated)	32.08 %
% of genes from short scaffolds (< 2000 bps)	77.36 %
Associated GOLD sequencing projects	45
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Unclassified (51.887 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Engineered → Built Environment → Unclassified → Unclassified → Unclassified → Clean Room (34.906 % of family members)
Environment Ontology (ENVO)	Unclassified (91.509 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Surface (non-saline) (34.906 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.99% β-sheet: 0.00% Coil/Unstructured: 63.01%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF07727	RVT_2	19.81
PF14223	Retrotran_gag_2	1.89
PF00665	rve	1.89
PF13976	gag_pre-integrs	1.89
PF00098	zf-CCHC	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	1.89
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	1.89
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	1.89
COG4584	Transposase	Mobilome: prophages, transposons [X]	1.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
All Organisms	root	All Organisms	48.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
cellular organisms	root	All Organisms → cellular organisms	48.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	38.68 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	9.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	33.96 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	8.49 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	33.96 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	8.49 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	31.13 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	8.49 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	31.13 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	8.49 %
Basidiomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	25.47 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	8.49 %
Agaricomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	25.47 %
Bacteroidaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	8.49 %
Agaricomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	25.47 %
Bacteroides	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides	8.49 %
Agaricomycetidae	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Acrogymnospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae	19.81 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	8.49 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	5.66 %
Agaricales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Pinopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida	18.87 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	8.49 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	5.66 %
Marasmiaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Marasmiaceae	0.94 %
Ginkgoopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Ginkgoopsida	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Pinidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae	18.87 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	8.49 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	5.66 %
Ginkgoidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Ginkgoopsida → Ginkgoidae	0.94 %
Moniliophthora	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Marasmiaceae → Moniliophthora	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Conifers I	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I	18.87 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	8.49 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	5.66 %
Ginkgoales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Ginkgoopsida → Ginkgoidae → Ginkgoales	0.94 %
Moniliophthora perniciosa	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Marasmiaceae → Moniliophthora → Moniliophthora perniciosa	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Pinales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales	18.87 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	8.49 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	5.66 %
Ginkgoaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Ginkgoopsida → Ginkgoidae → Ginkgoales → Ginkgoaceae	0.94 %
Moniliophthora perniciosa	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Marasmiaceae → Moniliophthora → Moniliophthora perniciosa	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Pinaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae	18.87 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	8.49 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	2.83 %
asterids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids	2.83 %
Ginkgo	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Ginkgoopsida → Ginkgoidae → Ginkgoales → Ginkgoaceae → Ginkgo	0.94 %
Moniliophthora perniciosa	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Marasmiaceae → Moniliophthora → Moniliophthora perniciosa	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Picea	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea	18.87 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	8.49 %
lamiids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids	2.83 %
rosids incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis	2.83 %
Ginkgo biloba	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Ginkgoopsida → Ginkgoidae → Ginkgoales → Ginkgoaceae → Ginkgo → Ginkgo biloba	0.94 %
Moniliophthora perniciosa	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Marasmiaceae → Moniliophthora → Moniliophthora perniciosa	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Picea abies	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	16.04 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	8.49 %
Lamiales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales	2.83 %
Vitales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales	2.83 %
Picea glauca	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea glauca	1.89 %
Ginkgo biloba	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Ginkgoopsida → Ginkgoidae → Ginkgoales → Ginkgoaceae → Ginkgo → Ginkgo biloba	0.94 %
Moniliophthora perniciosa	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Marasmiaceae → Moniliophthora → Moniliophthora perniciosa	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Picea abies	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	16.04 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	8.49 %
Oleaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae	2.83 %
Vitaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae	2.83 %
Picea glauca	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea glauca	1.89 %
Ginkgo biloba	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Ginkgoopsida → Ginkgoidae → Ginkgoales → Ginkgoaceae → Ginkgo → Ginkgo biloba	0.94 %
Moniliophthora perniciosa	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Marasmiaceae → Moniliophthora → Moniliophthora perniciosa	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Picea abies	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	16.04 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	8.49 %
Oleeae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae	2.83 %
Viteae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae	2.83 %
Picea glauca	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea glauca	1.89 %
Ginkgo biloba	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Ginkgoopsida → Ginkgoidae → Ginkgoales → Ginkgoaceae → Ginkgo → Ginkgo biloba	0.94 %
Moniliophthora perniciosa	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Marasmiaceae → Moniliophthora → Moniliophthora perniciosa	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Picea abies	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	16.04 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	8.49 %
Vitis	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae → Vitis	2.83 %
Olea	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea	2.83 %
Picea glauca	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea glauca	1.89 %
Ginkgo biloba	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Ginkgoopsida → Ginkgoidae → Ginkgoales → Ginkgoaceae → Ginkgo → Ginkgo biloba	0.94 %
Moniliophthora perniciosa	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Marasmiaceae → Moniliophthora → Moniliophthora perniciosa	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Picea abies	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	16.04 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	8.49 %
Olea europaea	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea	2.83 %
Vitis vinifera	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae → Vitis → Vitis vinifera	2.83 %
Picea glauca	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea glauca	1.89 %
Ginkgo biloba	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Ginkgoopsida → Ginkgoidae → Ginkgoales → Ginkgoaceae → Ginkgo → Ginkgo biloba	0.94 %
Moniliophthora perniciosa	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Marasmiaceae → Moniliophthora → Moniliophthora perniciosa	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Picea abies	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	16.04 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	8.49 %
Olea europaea subsp. europaea	subspecies	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea	2.83 %
Vitis vinifera	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae → Vitis → Vitis vinifera	2.83 %
Picea glauca	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea glauca	1.89 %
Ginkgo biloba	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Ginkgoopsida → Ginkgoidae → Ginkgoales → Ginkgoaceae → Ginkgo → Ginkgo biloba	0.94 %
Moniliophthora perniciosa	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Marasmiaceae → Moniliophthora → Moniliophthora perniciosa	0.94 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300008093\|Ga0100393_10399630	Not Available	637	Open in IMG/M
3300008095\|Ga0100392_1462090	Not Available	553	Open in IMG/M
3300009144\|Ga0058702_10275768	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	671	Open in IMG/M
3300009144\|Ga0058702_10316751	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	628	Open in IMG/M
3300009853\|Ga0118741_1018098	Not Available	606	Open in IMG/M
3300009853\|Ga0118741_1018380	Not Available	603	Open in IMG/M
3300010395\|Ga0058701_10693849	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Marasmiaceae → Moniliophthora → Moniliophthora perniciosa	559	Open in IMG/M
3300012056\|Ga0153925_1021214	Not Available	648	Open in IMG/M
3300012076\|Ga0153971_1051176	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	737	Open in IMG/M
3300012076\|Ga0153971_1053410	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Ginkgoopsida → Ginkgoidae → Ginkgoales → Ginkgoaceae → Ginkgo → Ginkgo biloba	718	Open in IMG/M
3300012076\|Ga0153971_1090067	Not Available	525	Open in IMG/M
3300012649\|Ga0118321_115535	Not Available	549	Open in IMG/M
3300013285\|Ga0136642_1150215	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	580	Open in IMG/M
3300013860\|Ga0181456_100428	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	5557	Open in IMG/M
3300013862\|Ga0181459_100523	Not Available	8802	Open in IMG/M
3300013862\|Ga0181459_101479	Not Available	4874	Open in IMG/M
3300013864\|Ga0181472_102958	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	3615	Open in IMG/M
3300013864\|Ga0181472_115596	Not Available	606	Open in IMG/M
3300013865\|Ga0181471_100526	Not Available	11866	Open in IMG/M
3300013865\|Ga0181471_100618	Not Available	10653	Open in IMG/M
3300013866\|Ga0181473_100532	All Organisms → cellular organisms → Bacteria	9708	Open in IMG/M
3300013866\|Ga0181473_101746	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	6274	Open in IMG/M
3300013866\|Ga0181473_102001	All Organisms → cellular organisms → Eukaryota	5864	Open in IMG/M
3300013866\|Ga0181473_106129	All Organisms → cellular organisms → Eukaryota	2416	Open in IMG/M
3300013866\|Ga0181473_107259	Not Available	1917	Open in IMG/M
3300013866\|Ga0181473_107696	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea	1778	Open in IMG/M
3300013866\|Ga0181473_107857	All Organisms → cellular organisms → Eukaryota	1725	Open in IMG/M
3300013866\|Ga0181473_109358	Not Available	1343	Open in IMG/M
3300013866\|Ga0181473_112300	All Organisms → cellular organisms → Eukaryota	931	Open in IMG/M
3300013868\|Ga0181469_102619	Not Available	5871	Open in IMG/M
3300013868\|Ga0181469_104066	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea	3692	Open in IMG/M
3300013868\|Ga0181469_104926	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	2923	Open in IMG/M
3300013868\|Ga0181469_105379	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	2610	Open in IMG/M
3300013868\|Ga0181469_108982	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1420	Open in IMG/M
3300013868\|Ga0181469_115385	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	809	Open in IMG/M
3300013869\|Ga0181468_101226	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	4890	Open in IMG/M
3300013869\|Ga0181468_101605	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae → Vitis → Vitis vinifera	4004	Open in IMG/M
3300013870\|Ga0181465_102828	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea glauca	6126	Open in IMG/M
3300013870\|Ga0181465_126658	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	522	Open in IMG/M
3300013872\|Ga0181463_1000054	Not Available	21106	Open in IMG/M
3300013872\|Ga0181463_1003453	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	3728	Open in IMG/M
3300013872\|Ga0181463_1017466	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae → Vitis → Vitis vinifera	988	Open in IMG/M
3300013873\|Ga0181464_1000069	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	28065	Open in IMG/M
3300013873\|Ga0181464_1001735	Not Available	10908	Open in IMG/M
3300013873\|Ga0181464_1004089	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	6610	Open in IMG/M
3300013873\|Ga0181464_1010248	Not Available	2900	Open in IMG/M
3300013873\|Ga0181464_1022646	Not Available	1343	Open in IMG/M
3300013873\|Ga0181464_1027193	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae → Vitis → Vitis vinifera	1140	Open in IMG/M
3300013873\|Ga0181464_1062772	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	567	Open in IMG/M
3300013873\|Ga0181464_1065378	Not Available	549	Open in IMG/M
3300015277\|Ga0182128_1023289	Not Available	712	Open in IMG/M
3300015277\|Ga0182128_1028632	Not Available	673	Open in IMG/M
3300015291\|Ga0182125_1024697	Not Available	742	Open in IMG/M
3300015291\|Ga0182125_1058890	Not Available	581	Open in IMG/M
3300015294\|Ga0182126_1003568	Not Available	1265	Open in IMG/M
3300015303\|Ga0182123_1061805	Not Available	578	Open in IMG/M
3300015307\|Ga0182144_1061237	Not Available	600	Open in IMG/M
3300015315\|Ga0182120_1123922	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	527	Open in IMG/M
3300015321\|Ga0182127_1010541	Not Available	1045	Open in IMG/M
3300015324\|Ga0182134_1051966	Not Available	746	Open in IMG/M
3300015332\|Ga0182117_1014622	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	1232	Open in IMG/M
3300015332\|Ga0182117_1030469	Not Available	979	Open in IMG/M
3300015340\|Ga0182133_1070843	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	761	Open in IMG/M
3300015361\|Ga0182145_1004523	Not Available	1584	Open in IMG/M
3300015361\|Ga0182145_1108420	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	612	Open in IMG/M
3300018466\|Ga0190268_11435654	Not Available	594	Open in IMG/M
3300020586\|Ga0213497_1003111	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea	1476	Open in IMG/M
3300020588\|Ga0213495_10017745	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea	849	Open in IMG/M
3300020590\|Ga0213496_10089737	Not Available	506	Open in IMG/M
3300020600\|Ga0213498_10033710	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	741	Open in IMG/M
3300020816\|Ga0214090_10471855	Not Available	686	Open in IMG/M
3300020816\|Ga0214090_10858060	Not Available	523	Open in IMG/M
3300020816\|Ga0214090_10875204	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	1403	Open in IMG/M
3300020816\|Ga0214090_10910679	Not Available	781	Open in IMG/M
3300020817\|Ga0214258_10448692	Not Available	848	Open in IMG/M
3300020817\|Ga0214258_11123526	Not Available	614	Open in IMG/M
3300022728\|Ga0224566_106858	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	662	Open in IMG/M
3300023280\|Ga0255813_10091165	Not Available	540	Open in IMG/M
3300023280\|Ga0255813_10965120	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	661	Open in IMG/M
3300023280\|Ga0255813_10981198	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	916	Open in IMG/M
3300023280\|Ga0255813_11169167	Not Available	797	Open in IMG/M
3300023291\|Ga0256703_10384167	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	609	Open in IMG/M
3300023291\|Ga0256703_10595860	Not Available	751	Open in IMG/M
3300023291\|Ga0256703_10744158	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	535	Open in IMG/M
3300023291\|Ga0256703_10756996	Not Available	649	Open in IMG/M
3300023291\|Ga0256703_10765095	Not Available	644	Open in IMG/M
3300023300\|Ga0256702_11176570	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	615	Open in IMG/M
3300023300\|Ga0256702_11316432	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea abies	961	Open in IMG/M
3300023300\|Ga0256702_11579059	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	711	Open in IMG/M
3300023300\|Ga0256702_11650295	Not Available	553	Open in IMG/M
3300023300\|Ga0256702_12255748	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	705	Open in IMG/M
3300023300\|Ga0256702_12280602	Not Available	520	Open in IMG/M
3300023300\|Ga0256702_12434455	Not Available	615	Open in IMG/M
3300023300\|Ga0256702_12719338	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	587	Open in IMG/M
3300027652\|Ga0209007_1016153	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1940	Open in IMG/M
3300030495\|Ga0268246_10203116	Not Available	590	Open in IMG/M
3300031355\|Ga0307421_1135866	Not Available	767	Open in IMG/M
3300031708\|Ga0310686_102113560	Not Available	690	Open in IMG/M
3300031708\|Ga0310686_107084035	Not Available	508	Open in IMG/M
3300031708\|Ga0310686_111750662	Not Available	510	Open in IMG/M
3300031708\|Ga0310686_111983342	Not Available	566	Open in IMG/M
3300032551\|Ga0321339_1129350	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	563	Open in IMG/M
3300032591\|Ga0214484_1088673	Not Available	644	Open in IMG/M
3300032591\|Ga0214484_1104712	Not Available	579	Open in IMG/M
3300032698\|Ga0214485_1084285	Not Available	603	Open in IMG/M
3300033545\|Ga0316214_1000143	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea glauca	6333	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	56.60%
Host-Associated	Host-Associated	31.13%
Environmental	Environmental	12.26%

Habitat	Taxonomy	Distribution
Built Environment	Engineered → Built Environment	34.91%
Plants	Host-Associated → Plants	26.42%
Bioreactor	Engineered → Bioreactor	21.70%
Terrestrial	Environmental → Terrestrial	6.60%
Aquatic	Environmental → Aquatic	5.66%
Fungi	Host-Associated → Fungi	3.77%
Human	Host-Associated → Human	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Built Environment → Unclassified	34.91%
Aerobic	Engineered → Bioreactor → Aerobic	21.70%
Phyllosphere	Host-Associated → Plants → Phyllosphere	17.92%
Phylloplane	Host-Associated → Plants → Phylloplane	7.55%
Soil	Environmental → Terrestrial → Soil	5.66%
Mycelium	Host-Associated → Fungi → Mycelium	3.77%
Freshwater	Environmental → Aquatic → Freshwater	2.83%
Marine	Environmental → Aquatic → Marine	2.83%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.94%
Skin	Host-Associated → Human → Skin	0.94%
Roots	Host-Associated → Plants → Roots	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Built Environment → Unclassified → Unclassified	34.91%
Unclassified	Engineered → Bioreactor → Aerobic → Unclassified	21.70%
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	17.92%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	7.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.72%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	3.77%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.89%
Oceanic	Environmental → Aquatic → Marine → Oceanic	1.89%
Lake	Environmental → Aquatic → Freshwater → Lake	0.94%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.94%
Loam	Environmental → Terrestrial → Soil → Loam	0.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.94%
Unclassified	Host-Associated → Human → Skin → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Built Environment → Unclassified → Unclassified → Unclassified	34.91%
Unclassified	Engineered → Bioreactor → Aerobic → Unclassified → Unclassified	21.70%
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	17.92%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	7.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.72%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	3.77%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.89%
Benthic	Environmental → Aquatic → Marine → Oceanic → Benthic	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.94%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Human → Skin → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Clean Room	Engineered → Built Environment → Unclassified → Unclassified → Unclassified → Clean Room	34.91%
Food Waste	Engineered → Bioreactor → Aerobic → Unclassified → Unclassified → Food Waste	21.70%
Miscanthus Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere	9.43%
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	8.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.72%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	3.77%
Leaf	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Leaf	3.77%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	3.77%
Aquifer	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Aquifer	1.89%
Wood Falls	Environmental → Aquatic → Marine → Oceanic → Benthic → Wood Falls	1.89%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.94%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.94%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.94%
Human Skin	Host-Associated → Human → Skin → Unclassified → Unclassified → Human Skin	0.94%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.94%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300008093	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-17	Environmental	Open in IMG/M
3300008095	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-16	Environmental	Open in IMG/M
3300009144	Agave microbial communities from Guanajuato, Mexico - Or.Sf.e	Host-Associated	Open in IMG/M
3300009853	Wood falls microbial communities from Lacaze-Duthiers Canyon, Mediterranean Sea, France - F3EC	Environmental	Open in IMG/M
3300010395	Agave microbial communities from Guanajuato, Mexico - Or.Ma.e	Host-Associated	Open in IMG/M
3300012056	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ009 MetaG	Host-Associated	Open in IMG/M
3300012076	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA055 MetaG	Host-Associated	Open in IMG/M
3300012649	Human skin bacterial and viral communities - University of Pennsylvania - MG100605	Host-Associated	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300013860	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In3 SAF170 SPAdes reassembly	Engineered	Open in IMG/M
3300013862	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In2P SAF170 SPAdes reassembly	Engineered	Open in IMG/M
3300013864	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - In1P-11 SPAdes reassembly	Engineered	Open in IMG/M
3300013865	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In5p-11 gowning area SPAdes reassembly	Engineered	Open in IMG/M
3300013866	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - In2P-11 SPAdes reassembly	Engineered	Open in IMG/M
3300013868	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In2 SAF170 SPAdes reassembly	Engineered	Open in IMG/M
3300013869	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In1 SAF170 SPAdes reassembly	Engineered	Open in IMG/M
3300013870	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In3-11 gowning area SPAdes reassembly	Engineered	Open in IMG/M
3300013872	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In1-11 gowning area SPAdes reassembly	Engineered	Open in IMG/M
3300013873	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In2-11 gowning area SPAdes reassembly	Engineered	Open in IMG/M
3300015277	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015291	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015294	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015303	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015307	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015315	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015321	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015324	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015332	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015340	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015361	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300020586	Leaf-associated microbial communities from Pinus contorta in Yosemite National Park, California, United States - Lodgepole_Yose_3	Host-Associated	Open in IMG/M
3300020588	Leaf-associated microbial communities from Pinus contorta in Yosemite National Park, California, United States - Lodgepole_Yose_1	Host-Associated	Open in IMG/M
3300020590	Leaf-associated microbial communities from Pinus contorta in Yosemite National Park, California, United States - Lodgepole_Yose_2	Host-Associated	Open in IMG/M
3300020600	Leaf-associated microbial communities from Pinus contorta in Yosemite National Park, California, United States - Lodgepole_Yose_4	Host-Associated	Open in IMG/M
3300020816	Food waste microbial community from Durham, Ontario, Canada - FW1 megahit	Engineered	Open in IMG/M
3300020817	Food waste and fibre mixture microbial community, University of Toronto, Ontario, Canada - LBfeed1 megahit	Engineered	Open in IMG/M
3300022728	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU2	Environmental	Open in IMG/M
3300023280	Combined Assembly of Gp0238881, Gp0242115	Engineered	Open in IMG/M
3300023291	Food waste and fibre mixture microbial community, University of Toronto, Ontario, Canada. Combined Assembly of Gp0242115, Gp0242119	Engineered	Open in IMG/M
3300023300	Food waste microbial community from Durham, Ontario, Canada. Combined Assembly of Gp0238881, Gp0242100	Engineered	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300030495	Agave microbial communities from Guanajuato, Mexico - Or.Sf.e (v2)	Host-Associated	Open in IMG/M
3300031355	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-70	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032551	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_31MAY2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032591	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032698	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033545	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093243

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0100393_103996301	3300008093	Aquifer	MLLSYIPTEDQDVDILTKALTRSKFEYHRGRIGVADNPYLVEREC*
Ga0100392_14620902	3300008095	Aquifer	MLLSYIPTEDQDVDMLTKALTRSKFEYHRGRIGVADNPYLVEREF*
Ga0058702_102757682	3300009144	Agave	MLLQYIPTEDQDADILMKVLTRSKFEYHRGRIGVADNSYPVEREC*
Ga0058702_103167511	3300009144	Agave	MLLKYIPKEDQDADILTKALTRRKFEYHRGRIGVKDNPYLVEREC*
Ga0118741_10180981	3300009853	Wood Falls	YIPMEDHDANIMTKALTRRKFEYHRGRTRVVDNPYLFEREC*
Ga0118741_10183801	3300009853	Wood Falls	MEDQDVDILTKALTRRKFEYHRGRIAVANNPYLVEREC*
Ga0058701_106938491	3300010395	Agave	YHHIRDCVQRKIMLLSYIPTEDQDADILTKALTKSQFEYHRGRIAVDDNPYLVEREC*
Ga0153925_10212141	3300012056	Attine Ant Fungus Gardens	MLLSYIPMEDQDADILTKALTRRKFEYHRGRIGVADNPYLVEREC*
Ga0153971_10511762	3300012076	Attine Ant Fungus Gardens	MLLSYIPTEDQDANILTKALTRRKFEYHRGRIGVADNPYLVER
Ga0153971_10534101	3300012076	Attine Ant Fungus Gardens	MLLSYIPMEDQDVDILTKALTRSKFEYHRGKIGVADNPYLVEREF*
Ga0153971_10900671	3300012076	Attine Ant Fungus Gardens	QDADILTKALTRRKFEYHRGRIGVADNPYLVEREC*
Ga0118321_1155351	3300012649	Human Skin	RRIMMLSYVPTEDQDADILTKALTRSKFEFHRGRIGVADNPYLAEREC*
Ga0136642_11502151	3300013285	Freshwater	MLLSYIPTEDQDADILTKALTRRKFEYHRGRIGVADNPYLVEREC*
Ga0181456_1004283	3300013860	Clean Room	MLLSYIPTEDQDDDILMKALTRSKFEYHQGRIGVFDNPYLVEREC*
Ga0181459_10052312	3300013862	Clean Room	MLLSYIPTEDQDADILTKVLTRSKLEYHQGRIGVANNPYLVEREC*
Ga0181459_1014799	3300013862	Clean Room	MLLSYIPMEDQDADILTKALTKRKFEYHRGKIGVADNPYLVENSTR*
Ga0181472_1029582	3300013864	Clean Room	MLLSYIPMEDQDADILTKALTRSKFEYHQDRIGVADNPYLVEREC*
Ga0181472_1155961	3300013864	Clean Room	YIPTEDQDADILTKALTRSKFEYHRGRIGVADNPYLVEREC*
Ga0181471_1005268	3300013865	Clean Room	MLLSYIPMEDQDADILTKALTRSKFEYHKGKLGVANNPYLVEREC*
Ga0181471_10061810	3300013865	Clean Room	MLLSYIPTKDQNADILTKALTRRKFEYHRGRIGVADNPYFVEREC*
Ga0181473_10053213	3300013866	Clean Room	MLLSYIPTEDQDVDILTKALTRRKFEYHKGRIGVVDNPYLVEREC*
Ga0181473_1017464	3300013866	Clean Room	MLLSYIPTEDQDVDILTKALTWSKFEYHQGRIGVADNPYLLEREC*
Ga0181473_1020015	3300013866	Clean Room	MLLSYIPTEDQDADILMKALTRSKFEYHRGKIGVADNPYLVERDC*
Ga0181473_1061292	3300013866	Clean Room	MLLSYIPTEDQDADILTKALTMGKFEYHRGRIGVADNPYLVEREC*
Ga0181473_1072592	3300013866	Clean Room	MLLSYIPTEDQDADILTKALTMRKFEYHQGRIRVADNPYLVEREC*
Ga0181473_1076961	3300013866	Clean Room	MLLSYIPTEDQDADILTKALTRSKFEYHRGRIGVADNXXXXS*
Ga0181473_1078571	3300013866	Clean Room	MLLSYIPMEDQDVDILTKALTRSKFEYHRGRIGIADNPYLVEREC*
Ga0181473_1093583	3300013866	Clean Room	MLLSYIPTEDQDADILTKALTRSKFEYHRGRIRVADNPYLVEREC*
Ga0181473_1123001	3300013866	Clean Room	MLLSYIPTEDQDADILTKALTRSKFEYHRGRIGVADNPYLVEREC
Ga0181469_1026193	3300013868	Clean Room	MLLSYIPMEDQDADILTKALTRRKFEYHRGRIGVDDNPYLVEREC*
Ga0181469_1040664	3300013868	Clean Room	MLLSYIPTEDQDADILMKVLTRSKFEYHQARIGVADNPYLIEREC*
Ga0181469_1049261	3300013868	Clean Room	MEDQDADILTKALTRRKFEYHRGRIGVADNPYLIEREC*
Ga0181469_1053795	3300013868	Clean Room	MLLSHIPTEDQDGDILMKALTRRKFEYHRGKIGVDDNPYLFEREC*
Ga0181469_1089822	3300013868	Clean Room	MLLSYLPTKDQDADILMKALTRSKFEYHRGRIGVADNPYLVEREC*
Ga0181469_1153852	3300013868	Clean Room	MLLSYIPMEDQDADILVKALTRRKFEYHRGKIGVADNPYLVKREC*
Ga0181468_1012262	3300013869	Clean Room	MLLSYIPTEDQDADILMKALTKRKFEYHRGRIGVANNPYIVEREC*
Ga0181468_1016052	3300013869	Clean Room	MLLSYIPTEDQDADILMKALTRSKFEYHRGRIGVVDNPYLIEREC*
Ga0181465_1028288	3300013870	Clean Room	MLLSYIPMEDQDVDILTKALTRSKFEYHQGRIGVADNPYLVEREC*
Ga0181465_1266581	3300013870	Clean Room	MLLSYIPTEDQDADILTKVLTRRKFEYHRGRIGVDDNPYLV
Ga0181463_100005413	3300013872	Clean Room	MLLSYISTEDQDADILTKALTRRKFEYHQGRIGVANNPSLVEREC*
Ga0181463_10034534	3300013872	Clean Room	MLLSYILTEDQDADILTKALTRRKFEYHRGRIGVADNPYLVEREC*
Ga0181463_10174663	3300013872	Clean Room	MLLSYIPTEDQDADILTKALTRSKFEYHRGRIGVVDN
Ga0181464_100006922	3300013873	Clean Room	MLLSYVPTEDQDVDILTKVLTRSKFEYHRGRIRVADNPYLVEREC*
Ga0181464_10017355	3300013873	Clean Room	MLLSYIPTKDQDVDILTKALTRSKFEYHRGRIGVADNPYLVEREC*
Ga0181464_10040894	3300013873	Clean Room	MLLSYIPTEDQDADILMKALTRSKFEYHRGRIGVADNPYLVEREC*
Ga0181464_10102483	3300013873	Clean Room	MLLSYIPTKDQDADILMKVLTRSKFEYHRGRIGVADNPYLVEREC*
Ga0181464_10226462	3300013873	Clean Room	MLLSYIPTEDQDANILTKALTRSKFEYHQGRIGVADN
Ga0181464_10271931	3300013873	Clean Room	MLLSYFPTEDQDVDILMKALTRSKLEYHRGRIGVADNPYLFEREC*
Ga0181464_10627721	3300013873	Clean Room	MLLSYIPTEDQDADILMKALTRRKFEYHRGKIGVADNPYLVKREC*
Ga0181464_10653781	3300013873	Clean Room	MLLSYIPTEDQDADILTKALTRSKFEYHRGRIGVADNTYLVERSVENATR*
Ga0182128_10232891	3300015277	Miscanthus Phyllosphere	LQYIPTEDQDADILMKALTRNKFEYHRGRIGVNDPDLCRNATE*
Ga0182128_10286321	3300015277	Miscanthus Phyllosphere	IRDCVQRKIMLLSYIPTEDQDADILMKALTKRKFEYHRGRIGVSDNPYLVEREC*
Ga0182125_10246971	3300015291	Miscanthus Phyllosphere	DRDVDILTKVLTKSKFEYHKGRIRVEDNPYLVEREC*
Ga0182125_10588902	3300015291	Miscanthus Phyllosphere	TEDQDVDILTKALTRRKFEYHRGRIGVADNPYLVEREC*
Ga0182126_10035681	3300015294	Miscanthus Phyllosphere	MMLSYVPTEDQDADILTKALTRSKFEFHRGRIGIADNPYLAEREC*
Ga0182123_10618051	3300015303	Miscanthus Phyllosphere	MLLSYIPTEDQDADILTKVLTRRKFEFHRGRIWVADNPYLVEREC*
Ga0182144_10612371	3300015307	Miscanthus Phyllosphere	MLLQYIPIEDQDADIQTKALTRRKFEYHRGRIGVKDNPYLVEREC*
Ga0182120_11239221	3300015315	Switchgrass Phyllosphere	MMRSYVPTEDQDADILTKALTRSKFEFHRGRIGVADNPYLAKREC*
Ga0182127_10105411	3300015321	Miscanthus Phyllosphere	YVPTEDQDADILTKALTRSKFEFHRGRIGIADNPYLAEREC*
Ga0182134_10519661	3300015324	Switchgrass Phyllosphere	MLLSYIPTEDQDANILTKALTRRKFEYHRGRIGVADNPYLVEREC*
Ga0182117_10146222	3300015332	Switchgrass Phyllosphere	MLLSYVPTEDQDDDILTKALTRSKFEFHRGRIVVADNPYLAEREF*
Ga0182117_10304691	3300015332	Switchgrass Phyllosphere	IPTEDQDANILTKALTRRKFKYHRGRIGVADNPYLVEREC*
Ga0182133_10708431	3300015340	Switchgrass Phyllosphere	MEDQDADISTKALTRRKFEYHRGRIRVADNPHLVEREC*
Ga0182145_10045231	3300015361	Miscanthus Phyllosphere	VQRRIMMLSYVPTEDQDADILTKALTRSKFEFHRGRIGIADNPYLAEREC*
Ga0182145_11084202	3300015361	Miscanthus Phyllosphere	MLLSYIPTEDQDADILMKALTKSKFEYHRGRIGVADNPYLVEREC*
Ga0190268_114356541	3300018466	Soil	RDCVQRKIILLSYIPTEDQDADILTKALTKSKFKYHRGRIGVADNPYLVEREC
Ga0213497_10031112	3300020586	Leaf	YIPTEDQDADILTKALTRSKFEYHRGKIGVVDNPYLIEREC
Ga0213495_100177451	3300020588	Leaf	MLLSYIPMEDQDADILTKALTRSKFEYHRGRIGVADNPYLVEREC
Ga0213496_100897371	3300020590	Leaf	MLLSYIPTEDHDVDILTKALTRSKFEYHRDRIGVADNPYLVEREC
Ga0213498_100337102	3300020600	Leaf	MLLSYNPTEDQDVDILTKALTRSKFEYHRGRIGVADNPYLVEREC
Ga0214090_104718552	3300020816	Food Waste	MLLQYIPTEDQDADILTKALTKRKFEYHRDRIRVKDNPFLVEREC
Ga0214090_108580601	3300020816	Food Waste	MLLSYIPMEDQDADILTKALTRSKFEYHRGRIGVVDNPYLVEREC
Ga0214090_108752041	3300020816	Food Waste	MLSYVPTEDQDADILTKALTRSKFEFHRGRIGVADNPYLAEREC
Ga0214090_109106791	3300020816	Food Waste	MEDQDENILMKVLTRRKLEYHRGRIRVADNPFIVEREC
Ga0214258_104486922	3300020817	Food Waste	MEDQDADILMKALTKRKYEYNRDRIGVKDNPFLVEREC
Ga0214258_111235261	3300020817	Food Waste	CVQWRIMMLSYVPTEDQDVDILTKALTRSKFEFHRGRIGVENNPYLAEREC
Ga0224566_1068582	3300022728	Plant Litter	MLLQYIPTEDQDADILMKPLTRSKFEYHRDRIGVKDNPFLVERE
Ga0255813_100911651	3300023280	Food Waste	MLLPYIPAEDQDAYILTKELTRIEFKYHRGRIRVKDNPYIVEREC
Ga0255813_109651201	3300023280	Food Waste	MLLQYIPTEDQDADILTKALTKRKLEYHRDMIGVKDNPFLVEREC
Ga0255813_109811982	3300023280	Food Waste	MLLQYIPTEDEDADILTKELAKRKFEYHKSRIGVADIPFLVEREC
Ga0255813_111691671	3300023280	Food Waste	TEDQDADILTKALTRSKFEFHRGRIGVADNPYLAEREC
Ga0256703_103841671	3300023291	Food Waste	MLSYVPTEDQDADILTKALTRSKFEFHRGRIRVADNPYLAEREC
Ga0256703_105958601	3300023291	Food Waste	MLLQYIYTEDQNADILMKVLGTRKFKYHRGRIGVKDNPYLVEREC
Ga0256703_107441582	3300023291	Food Waste	MLLSYIPTEDQDADILTKALTRRKFEYHRGRIEVEDNPYLVEREY
Ga0256703_107569961	3300023291	Food Waste	MLLQYIPTEDQDADILMKALTRSKFKYHRGRIGVADNPYLVERKC
Ga0256703_107650951	3300023291	Food Waste	MLPQYIPTEDQDENILTKVLTRRKFEYHRGRIEVKDNPYLVEREC
Ga0256702_111765701	3300023300	Food Waste	MLLSYIPTEDQDADILTKALTRSKFEYHRGRIGVADNPYLFEREC
Ga0256702_113164321	3300023300	Food Waste	MLLQYILMEDQDADILTKALTRIKFEYHRDRIGAADNPYLLEREC
Ga0256702_115790592	3300023300	Food Waste	MLLSYIPTEDQDADILTKALTRRKFEYHRGMIGVVDNPYLVEREC
Ga0256702_116502951	3300023300	Food Waste	MEDQDVDILTKALTRKKIEYHRDNIRVKDNPFLVEREF
Ga0256702_122557481	3300023300	Food Waste	VQQKIMFLQYIPTKDRDVDILTKALSRRKFEYHRGKIGVKDNPYL
Ga0256702_122806022	3300023300	Food Waste	MLLQYIPTEDQDADILTKAFTKRKFKYHRGRIRVPDNPFLVEREC
Ga0256702_124344552	3300023300	Food Waste	EDQDADTLTKVLTRRKFECHRDKIGVKDNPFLVERECLDSTR
Ga0256702_127193381	3300023300	Food Waste	MEDQDANILMKVLTRRKFEYHRDKIGVKDNPFPFERECLDSTRRS
Ga0209007_10161532	3300027652	Forest Soil	MLLSYIPTEDQDADILTKALTRSKFEYHLGRIGVADNPYLVEREC
Ga0268246_102031161	3300030495	Agave	MLLQLIPTEDRDADILTKAVTKRKFEYHRGMIRVADNPFLVEREC
Ga0307421_11358661	3300031355	Salt Marsh	QRRIMMLSYVPTEDQDADILTKALTRSKFEFHRGRIGIADNPYLAEREC
Ga0310686_1021135602	3300031708	Soil	MEYQDANILTKAVTRRKYEYHRDRIEVKDTPLLVEREH
Ga0310686_1070840351	3300031708	Soil	TEDQDADILTKVLTMRKFEYHRDKIGVKDNPFLVEREC
Ga0310686_1117506621	3300031708	Soil	MEDQDVDILMKALTWRKFKYHRDRIGVKDNPFLVERE
Ga0310686_1119833421	3300031708	Soil	LQYIPTEDQDVDILMKALTRRIFKYHRDRIEVKDNPFLVEREC
Ga0321339_11293502	3300032551	Switchgrass Phyllosphere	MLLQYIPTEDHNADILMKALTRSKFEYHRGRIGVKDNPYLVE
Ga0214484_10886731	3300032591	Switchgrass Phyllosphere	MLLSYIPMEDQDADILTKALTRSKFEYHRGRIGAADNPYL
Ga0214484_11047122	3300032591	Switchgrass Phyllosphere	QRIMLLSYIPTEDQDADILTKALTRRKFEYHRGRIGVADNPYLFEREC
Ga0214485_10842851	3300032698	Switchgrass Phyllosphere	QDADVLTKALAKSKFEYHRGRIGVADNPFLVEREC
Ga0316214_10001431	3300033545	Roots	DQDAHILMKPLTRRKFEYHRDRIGVKDNPFLVEREC

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign