Metagenome / Metatranscriptome Family F093052

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093052
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	63 residues
Representative Sequence	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGK
Number of Associated Samples	86
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.06 %
% of genes near scaffold ends (potentially truncated)	98.11 %
% of genes from short scaffolds (< 2000 bps)	92.45 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.132 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (52.830 % of family members)
Environment Ontology (ENVO)	Unclassified (66.981 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (53.774 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 27.12% Coil/Unstructured: 72.88%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00378	ECH_1	87.74
PF02602	HEM4	5.66
PF01609	DDE_Tnp_1	0.94
PF04434	SWIM	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1587	Uroporphyrinogen-III synthase	Coenzyme transport and metabolism [H]	5.66
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.94
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.94
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.94
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.94
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.94
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.94
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	0.94
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.94
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.13 %
Unclassified	root	N/A	18.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.13 %
Unclassified	root	N/A	18.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.13 %
Unclassified	root	N/A	18.87 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	79.25 %
Unclassified	root	N/A	18.87 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	76.42 %
Unclassified	root	N/A	18.87 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	31.13 %
Unclassified	root	N/A	18.87 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.55 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5.66 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	30.19 %
Unclassified	root	N/A	18.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.55 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.89 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	30.19 %
Unclassified	root	N/A	18.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.55 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.89 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.94 %

Name	Rank	Taxonomy	Distribution
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	30.19 %
Unclassified	root	N/A	18.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.55 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.89 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium sp. sGM-13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	30.19 %
Unclassified	root	N/A	18.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.55 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.89 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005177\|Ga0066690_10573202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	754	Open in IMG/M
3300005187\|Ga0066675_10496742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	911	Open in IMG/M
3300005332\|Ga0066388_102638810	Not Available	916	Open in IMG/M
3300005518\|Ga0070699_101114775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	724	Open in IMG/M
3300005559\|Ga0066700_10143310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1612	Open in IMG/M
3300005561\|Ga0066699_10388253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	999	Open in IMG/M
3300010046\|Ga0126384_10136091	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300010048\|Ga0126373_12065684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	632	Open in IMG/M
3300010154\|Ga0127503_10944650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	728	Open in IMG/M
3300010361\|Ga0126378_11576577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	745	Open in IMG/M
3300010398\|Ga0126383_12012403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	665	Open in IMG/M
3300011270\|Ga0137391_10100600	All Organisms → cellular organisms → Bacteria	2504	Open in IMG/M
3300011271\|Ga0137393_10253180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1495	Open in IMG/M
3300012200\|Ga0137382_11169032	Not Available	548	Open in IMG/M
3300012361\|Ga0137360_10537746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	997	Open in IMG/M
3300012930\|Ga0137407_10713217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	945	Open in IMG/M
3300012971\|Ga0126369_11912745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	682	Open in IMG/M
3300016294\|Ga0182041_11792661	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M
3300016319\|Ga0182033_10630110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	934	Open in IMG/M
3300016319\|Ga0182033_10738800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	864	Open in IMG/M
3300016319\|Ga0182033_11966211	Not Available	532	Open in IMG/M
3300016371\|Ga0182034_11152371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	673	Open in IMG/M
3300016371\|Ga0182034_11289432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	637	Open in IMG/M
3300016387\|Ga0182040_10736135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	808	Open in IMG/M
3300016422\|Ga0182039_10445728	Not Available	1108	Open in IMG/M
3300016445\|Ga0182038_10416888	Not Available	1129	Open in IMG/M
3300016445\|Ga0182038_10564361	Not Available	979	Open in IMG/M
3300017933\|Ga0187801_10466854	Not Available	531	Open in IMG/M
3300017995\|Ga0187816_10045193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1826	Open in IMG/M
3300018058\|Ga0187766_10903559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	623	Open in IMG/M
3300018468\|Ga0066662_11768037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	647	Open in IMG/M
3300020580\|Ga0210403_10865184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	715	Open in IMG/M
3300020581\|Ga0210399_10525514	Not Available	982	Open in IMG/M
3300021372\|Ga0213877_10222240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	620	Open in IMG/M
3300021405\|Ga0210387_10093954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2497	Open in IMG/M
3300021441\|Ga0213871_10251400	Not Available	562	Open in IMG/M
3300022525\|Ga0242656_1014102	Not Available	1118	Open in IMG/M
3300027655\|Ga0209388_1220433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	521	Open in IMG/M
3300027748\|Ga0209689_1293706	Not Available	633	Open in IMG/M
3300027846\|Ga0209180_10301885	Not Available	917	Open in IMG/M
3300031231\|Ga0170824_125637137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	836	Open in IMG/M
3300031446\|Ga0170820_17437826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	713	Open in IMG/M
3300031469\|Ga0170819_13783009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	846	Open in IMG/M
3300031474\|Ga0170818_101235414	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300031474\|Ga0170818_108641784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	801	Open in IMG/M
3300031543\|Ga0318516_10152250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1329	Open in IMG/M
3300031545\|Ga0318541_10009244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4369	Open in IMG/M
3300031545\|Ga0318541_10742135	Not Available	548	Open in IMG/M
3300031546\|Ga0318538_10240977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	970	Open in IMG/M
3300031572\|Ga0318515_10564063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	606	Open in IMG/M
3300031573\|Ga0310915_10164802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1538	Open in IMG/M
3300031679\|Ga0318561_10556279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632	Open in IMG/M
3300031680\|Ga0318574_10020239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3228	Open in IMG/M
3300031680\|Ga0318574_10532398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	689	Open in IMG/M
3300031681\|Ga0318572_10114602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1534	Open in IMG/M
3300031681\|Ga0318572_10966841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300031682\|Ga0318560_10119920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1375	Open in IMG/M
3300031713\|Ga0318496_10425395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	734	Open in IMG/M
3300031744\|Ga0306918_10209071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1474	Open in IMG/M
3300031763\|Ga0318537_10068487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1299	Open in IMG/M
3300031765\|Ga0318554_10208986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1111	Open in IMG/M
3300031765\|Ga0318554_10467988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	714	Open in IMG/M
3300031770\|Ga0318521_10506959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	725	Open in IMG/M
3300031771\|Ga0318546_10010955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4828	Open in IMG/M
3300031771\|Ga0318546_10207327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1340	Open in IMG/M
3300031771\|Ga0318546_10653412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	740	Open in IMG/M
3300031778\|Ga0318498_10119444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1199	Open in IMG/M
3300031779\|Ga0318566_10257698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	864	Open in IMG/M
3300031782\|Ga0318552_10551316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	588	Open in IMG/M
3300031792\|Ga0318529_10386768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	651	Open in IMG/M
3300031795\|Ga0318557_10076264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1455	Open in IMG/M
3300031797\|Ga0318550_10017181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2925	Open in IMG/M
3300031798\|Ga0318523_10287771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	820	Open in IMG/M
3300031798\|Ga0318523_10343869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	743	Open in IMG/M
3300031799\|Ga0318565_10625935	Not Available	517	Open in IMG/M
3300031805\|Ga0318497_10065063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1907	Open in IMG/M
3300031819\|Ga0318568_11028963	Not Available	508	Open in IMG/M
3300031846\|Ga0318512_10063058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1680	Open in IMG/M
3300031859\|Ga0318527_10341982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300031859\|Ga0318527_10496002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300031890\|Ga0306925_10645870	Not Available	1113	Open in IMG/M
3300031910\|Ga0306923_10406805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1548	Open in IMG/M
3300031910\|Ga0306923_11574504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	684	Open in IMG/M
3300031941\|Ga0310912_10308758	Not Available	1225	Open in IMG/M
3300031942\|Ga0310916_10979627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	706	Open in IMG/M
3300031946\|Ga0310910_10843132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	720	Open in IMG/M
3300032001\|Ga0306922_10609248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1156	Open in IMG/M
3300032001\|Ga0306922_11929132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	577	Open in IMG/M
3300032001\|Ga0306922_12199777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	532	Open in IMG/M
3300032001\|Ga0306922_12308108	Not Available	516	Open in IMG/M
3300032010\|Ga0318569_10439483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300032025\|Ga0318507_10090644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1265	Open in IMG/M
3300032025\|Ga0318507_10460530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300032041\|Ga0318549_10136552	Not Available	1087	Open in IMG/M
3300032043\|Ga0318556_10458920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	666	Open in IMG/M
3300032044\|Ga0318558_10620106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	540	Open in IMG/M
3300032052\|Ga0318506_10027595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2142	Open in IMG/M
3300032052\|Ga0318506_10159864	Not Available	988	Open in IMG/M
3300032054\|Ga0318570_10444916	All Organisms → cellular organisms → Bacteria → Proteobacteria	591	Open in IMG/M
3300032059\|Ga0318533_10533324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	861	Open in IMG/M
3300032060\|Ga0318505_10005256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4243	Open in IMG/M
3300032060\|Ga0318505_10096326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1334	Open in IMG/M
3300032066\|Ga0318514_10400646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	728	Open in IMG/M
3300032067\|Ga0318524_10521149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300032090\|Ga0318518_10343423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	766	Open in IMG/M
3300032261\|Ga0306920_104264152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.06%
Host-Associated	Host-Associated	0.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.23%
Aquatic	Environmental → Aquatic	2.83%
Plants	Host-Associated → Plants	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.23%
Freshwater	Environmental → Aquatic → Freshwater	2.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.40%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.89%
Loam	Environmental → Terrestrial → Soil → Loam	1.89%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	75.47%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.66%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	52.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.89%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.94%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066690_105732021	3300005177	Soil	MRGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLTPKHHERTILVAPKGYGKTLLLIAKKKSFLEARSGQIVMAENRFID
Ga0066675_104967421	3300005187	Soil	MSERQPMRGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLTPKHHERTILVAPKGYGKTLLLIAKKKSFLEARSGQIVMA
Ga0066388_1026388101	3300005332	Tropical Forest Soil	MSDRHSIQGPWRVEADTLPEMAYDHYRHSLIHETSSIKAYLAPKHQERTIL
Ga0070699_1011147752	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSERQPMRGPWRVEADTLPEMAYDHYRHTLNHETSSIKAYLTPK
Ga0066700_101433103	3300005559	Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLTPKHHERTILVAPKGYGKTLLL
Ga0066699_103882531	3300005561	Soil	MSERQPMRGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLTPKQHERTILVAPKGYGKTLLLIAKKKSVLEARSGQIVMAEN
Ga0126384_101360913	3300010046	Tropical Forest Soil	MTERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKG
Ga0126373_120656841	3300010048	Tropical Forest Soil	MSERQAVQGPWRVEADTLPEMAYDRYRHTLIHETSSIQAYLTPKHHERTILVAPKGY
Ga0127503_109446502	3300010154	Soil	MSDRQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIQAYLAPKHHERTILVAPKGYGKTLLLIAKKKSFL
Ga0126378_115765771	3300010361	Tropical Forest Soil	MSERHPIQGPWRVEADTLPEMAYDNYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLL
Ga0126383_120124032	3300010398	Tropical Forest Soil	MSDRQPVQGPWRVEADTLPEMAYDHYRHTLIHETSSIKGYLTPKHHERTILVAPKGYGKTLLLIAKKK
Ga0137391_101006001	3300011270	Vadose Zone Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIQAYLAPRHQERTILVAPKGYG
Ga0137393_102531803	3300011271	Vadose Zone Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPRHQERTILVAPKGYGKTLLLIAKKKSFLEARS
Ga0137382_111690321	3300012200	Vadose Zone Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQKRTILVAPKRYGKTLLLIAKKKSFL
Ga0137360_105377462	3300012361	Vadose Zone Soil	MRGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSFLEARSGQIVMAENRF
Ga0137407_107132171	3300012930	Vadose Zone Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLTPKHHERTILVA
Ga0126369_119127452	3300012971	Tropical Forest Soil	MSERQAVQGPWRVEADTLPEMAYDRYRHTLIHETSSIQAYLTPKHQERTILVAPKGYGK
Ga0182041_117926611	3300016294	Soil	MSDRQHMQGPWRVEADTLPDMAYDNYRHTLIHETSSIKAFLTTKHHERTILVAPK
Ga0182033_106301101	3300016319	Soil	MSDRQPMQGPWRVEADTLPDMAYDNYRHTLIHETSSIKAFLTTKHHERT
Ga0182033_107388002	3300016319	Soil	MSERHPSQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSFLEARSG
Ga0182033_119662111	3300016319	Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSFLEARS
Ga0182034_111523711	3300016371	Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERT
Ga0182034_112894321	3300016371	Soil	MSEKQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGY
Ga0182040_107361352	3300016387	Soil	MPERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYG
Ga0182039_104457282	3300016422	Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSFLEARSGQIV
Ga0182038_104168882	3300016445	Soil	MSERQAVQGPWRVEADTLPEMAYDRYRHTLIHETSSIQAYLTPKHQERTILVAPKGYGKTLLLIAKKK
Ga0182038_105643611	3300016445	Soil	MSEKQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKS
Ga0187801_104668542	3300017933	Freshwater Sediment	MSDRQPTQGPWRVEADTLPEMAYDHYRHTLIHETSPIKAYLAPKHQERTILVAPKGYG
Ga0187816_100451932	3300017995	Freshwater Sediment	MSDRQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLTPKHQERTILVAPKGYGKTLLLIAKK
Ga0187766_109035592	3300018058	Tropical Peatland	MSDRQPTQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKK
Ga0066662_117680371	3300018468	Grasslands Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLTPKHHERTILVAPKGYGKTLLLIAKKKSFLEARSGQIVMAENR
Ga0210403_108651842	3300020580	Soil	MSDRQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTI
Ga0210399_105255141	3300020581	Soil	MSDRQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKS
Ga0213877_102222402	3300021372	Bulk Soil	MYDRQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLTPKH
Ga0210387_100939544	3300021405	Soil	MSERHLIQGPWRVEADTLPEMAYDHYRHSLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSFLEARSGQIVMAENRFID
Ga0213871_102514001	3300021441	Rhizosphere	MSERQAVQGPWRVEADTVPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYG
Ga0242656_10141021	3300022525	Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLTPKHHERTILVAPKGYGKTLLLIAKKKSFLEARS
Ga0209388_12204332	3300027655	Vadose Zone Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLTPKHHERTILVAPKGYGKTLLLIAKKKSFLEARSGQIVM
Ga0209689_12937061	3300027748	Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLTPKHHERTIV
Ga0209180_103018851	3300027846	Vadose Zone Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIQAYLAPRHQERTI
Ga0170824_1256371371	3300031231	Forest Soil	MSERLPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLTPKHHERTILVAPKGYGKTLLLIAKKK
Ga0170820_174378261	3300031446	Forest Soil	MSDKQPMQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSLLEA
Ga0170819_137830091	3300031469	Forest Soil	MSDRHSIQGPWRVEADTLPEMAYDHYRHTLIYETSSIKAYLAPKHQERTIL
Ga0170818_1012354141	3300031474	Forest Soil	MSDRQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIQAYLAPKHQERTILVAPKGYGKTLL
Ga0170818_1086417841	3300031474	Forest Soil	MSQRQLIHGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLTPKHHERTILVAPK
Ga0318516_101522501	3300031543	Soil	MSEKQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSFLEA
Ga0318541_100092442	3300031545	Soil	MSERHLIQGPWRVEADTLPEMAYDHYRHSLIHETSSIKAYLAPKHQERTILVAPKG
Ga0318541_107421351	3300031545	Soil	MSDRQPAQGPWRVEADTLPEMAYDHYRHTLIHETNSIKAYLAPKHQERTILVAPKGYG
Ga0318538_102409772	3300031546	Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSLLEA
Ga0318515_105640631	3300031572	Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETTSIKAYLAPKHQERTILV
Ga0310915_101648021	3300031573	Soil	MSEKQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSLLEARSGQIVMAENRF
Ga0318561_105562792	3300031679	Soil	MTERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSLLEARSGQIVM
Ga0318574_100202394	3300031680	Soil	MSEKQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYG
Ga0318574_105323981	3300031680	Soil	MPERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKT
Ga0318572_101146023	3300031681	Soil	MSERHLSQGPWRVEADTLPEMAYDHYRHSLIHETSSIKAYLAPKHQ
Ga0318572_109668412	3300031681	Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSFLEARSGQI
Ga0318560_101199201	3300031682	Soil	DPMSERHLIQGPWRVEADTLPEMAYDHYRHSLIHETSSIKAYLAPKHQERTILVAPKG
Ga0318496_104253952	3300031713	Soil	MSDRQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSFLEAR
Ga0306918_102090713	3300031744	Soil	MSDRQHMQGPWRVEADTLPDMAYDNYRHTLIHETSSIKAFLTTKHHE
Ga0318537_100684871	3300031763	Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSL
Ga0318554_102089863	3300031765	Soil	MPERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSF
Ga0318554_104679881	3300031765	Soil	MSEKQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSFLEARSGQIVM
Ga0318521_105069592	3300031770	Soil	MSDRQPTQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILV
Ga0318546_100109554	3300031771	Soil	MSERHLSQGPWRVEADTLPEMAYDHYRHSLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKK
Ga0318546_102073271	3300031771	Soil	MSERHLIQGPWRVEADTLPEMAYDHYRHSLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSFLEARSGQIVM
Ga0318546_106534121	3300031771	Soil	MSERHPSQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYG
Ga0318498_101194442	3300031778	Soil	MSEKQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSLLEA
Ga0318566_102576982	3300031779	Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKS
Ga0318552_105513162	3300031782	Soil	MSDRQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQKRTILVAPKGYGKTLLL
Ga0318529_103867682	3300031792	Soil	MSERHLIQGPWRVEADTLPEMAYDHYRHSLIHETSSIKAYLAPKHQE
Ga0318557_100762641	3300031795	Soil	MSEKQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLL
Ga0318550_100171814	3300031797	Soil	MSERHLIQGPWRVEADTLPEMAYDHYRHSLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSF
Ga0318523_102877712	3300031798	Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTIL
Ga0318523_103438692	3300031798	Soil	MSEKQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPK
Ga0318565_106259351	3300031799	Soil	MSERHLIQGPWRVEADTLPEMAYDHYRHSLIHETSSIKAYLAPKHQERT
Ga0318497_100650631	3300031805	Soil	MPERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKG
Ga0318568_110289631	3300031819	Soil	MSEKQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILV
Ga0318512_100630581	3300031846	Soil	MPERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSFLEARAGQIVMAEN
Ga0318527_103419821	3300031859	Soil	MSERHLSQGPWRVEADTLPEMAYDHYRHSLIHETSSIKAYLAPKHQERTILVAPKGYGKTLL
Ga0318527_104960021	3300031859	Soil	MSEKQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSFLEARS
Ga0306925_106458703	3300031890	Soil	MSDRHSVQGPWRVEADTLPEMAYDHYRHSLIHETSSIKAYLAPKHQERTILVAPKGY
Ga0306923_104068053	3300031910	Soil	MSERHPSQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTI
Ga0306923_115745042	3300031910	Soil	MTEGQPIQGPWRVEADTLPEMAYDHYRHTLIHETSAIKAYLAPKHQERTILVAPK
Ga0310912_103087583	3300031941	Soil	MSDRQPMQGPWRVEADTLPDMAYDNYRHTLIHETSSIKAFL
Ga0310916_109796271	3300031942	Soil	MSDRQPAQGPWRVEADTLPEMAYDHYRHTLIHETNSIKAYLAPKHQERTILVAPKGYGKTLL
Ga0310910_108431322	3300031946	Soil	MSEKQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSLLEARSGQ
Ga0306922_106092482	3300032001	Soil	MTERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAK
Ga0306922_119291322	3300032001	Soil	MSDRQPTQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKH
Ga0306922_121997771	3300032001	Soil	MSDRHSVQGPWRVEADTLPEMAYDHYRHSLIHETSSIKAYLAPKHQERTILV
Ga0306922_123081081	3300032001	Soil	MSERQAVQGPWRVEADTLPEMAYDRYRHTLIHETSSIQAYLAPKHQERTILVA
Ga0318569_104394831	3300032010	Soil	MPERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLL
Ga0318507_100906443	3300032025	Soil	MSERHLIQGPWRVEADTLPEMAYDHYRHSLIHETSSIKAYLAPKHQERTILVAPKGYGKTLL
Ga0318507_104605302	3300032025	Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSLLEARSG
Ga0318549_101365522	3300032041	Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKG
Ga0318556_104589201	3300032043	Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYG
Ga0318558_106201062	3300032044	Soil	MSERHLIQGPWRVEADTLPEMAYDHYRHSLIHETSSIKAYLAPKHQERTI
Ga0318506_100275954	3300032052	Soil	MSDRQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLL
Ga0318506_101598641	3300032052	Soil	MSDRQPTQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGY
Ga0318570_104449161	3300032054	Soil	MPERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSFLAA
Ga0318533_105333242	3300032059	Soil	MSEKQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKG
Ga0318505_100052564	3300032060	Soil	MSERHLIQGPWRVEADTLPEMAYDHYRHSLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSFLEARSGQIV
Ga0318505_100963261	3300032060	Soil	MSDRQPTQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERT
Ga0318514_104006461	3300032066	Soil	MSDRQHMQGPWRVEADTLPDMAYDNYRHTLIHETSSIKAFLTTKHHERTILVAPKGYG
Ga0318524_105211491	3300032067	Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSFLEARSGQIVMAEN
Ga0318518_103434232	3300032090	Soil	MSERQPIQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGK
Ga0306920_1042641521	3300032261	Soil	MSERQSTQGPWRVEADTLPEMAYDHYRHTLIHETSSIKAYLAPKHQERTILVAPKGYGKTLLLIAKKKSVLEAKSGQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093052

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences