NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F092973

Metagenome Family F092973

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092973
Family Type Metagenome
Number of Sequences 106
Average Sequence Length 51 residues
Representative Sequence MIFGFVEERICVYSLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Number of Associated Samples 23
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 11.32 %
% of genes near scaffold ends (potentially truncated) 64.15 %
% of genes from short scaffolds (< 2000 bps) 63.21 %
Associated GOLD sequencing projects 23
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (65.094 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza
(60.377 % of family members)
Environment Ontology (ENVO) Unclassified
(98.113 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(85.849 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 65.31%    β-sheet: 0.00%    Coil/Unstructured: 34.69%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF00078RVT_1 2.83
PF03732Retrotrans_gag 2.83
PF07727RVT_2 2.83
PF02458Transferase 0.94
PF05617Prolamin_like 0.94
PF08648SNRNP27 0.94
PF00665rve 0.94
PF14223Retrotran_gag_2 0.94
PF13960DUF4218 0.94
PF13456RVT_3 0.94
PF13902R3H-assoc 0.94
PF00098zf-CCHC 0.94
PF14111DUF4283 0.94
PF00067p450 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG2124Cytochrome P450Defense mechanisms [V] 0.94
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 0.94
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 0.94
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 0.94
COG4584TransposaseMobilome: prophages, transposons [X] 0.94


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A65.09 %
All OrganismsrootAll Organisms34.91 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300025327|Ga0209751_10708326Not Available796Open in IMG/M
3300028786|Ga0307517_10004437All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta21555Open in IMG/M
3300028786|Ga0307517_10005775All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta18511Open in IMG/M
3300028786|Ga0307517_10032045All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae6092Open in IMG/M
3300028786|Ga0307517_10202751Not Available1236Open in IMG/M
3300028786|Ga0307517_10331912Not Available835Open in IMG/M
3300028786|Ga0307517_10367987Not Available773Open in IMG/M
3300028786|Ga0307517_10557331Not Available571Open in IMG/M
3300028786|Ga0307517_10619226Not Available530Open in IMG/M
3300028794|Ga0307515_10005850All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta24818Open in IMG/M
3300028794|Ga0307515_10010834All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida17393Open in IMG/M
3300028794|Ga0307515_10038545All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae7639Open in IMG/M
3300028794|Ga0307515_10049037All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus6369Open in IMG/M
3300028794|Ga0307515_10489406Not Available841Open in IMG/M
3300028794|Ga0307515_10500605Not Available825Open in IMG/M
3300030521|Ga0307511_10102222All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta1873Open in IMG/M
3300030521|Ga0307511_10124549Not Available1578Open in IMG/M
3300030521|Ga0307511_10145345Not Available1379Open in IMG/M
3300030521|Ga0307511_10163855Not Available1240Open in IMG/M
3300030521|Ga0307511_10169213Not Available1205Open in IMG/M
3300030521|Ga0307511_10311694Not Available702Open in IMG/M
3300030521|Ga0307511_10408530Not Available554Open in IMG/M
3300030521|Ga0307511_10453265Not Available506Open in IMG/M
3300030522|Ga0307512_10044961Not Available3623Open in IMG/M
3300030522|Ga0307512_10133731Not Available1544Open in IMG/M
3300031456|Ga0307513_10071984All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae3605Open in IMG/M
3300031456|Ga0307513_10100401All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta2919Open in IMG/M
3300031456|Ga0307513_10150069All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta2241Open in IMG/M
3300031456|Ga0307513_10282455Not Available1436Open in IMG/M
3300031456|Ga0307513_10602734All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa807Open in IMG/M
3300031456|Ga0307513_10625678Not Available784Open in IMG/M
3300031456|Ga0307513_10665796Not Available747Open in IMG/M
3300031456|Ga0307513_10705509Not Available714Open in IMG/M
3300031456|Ga0307513_11000895Not Available545Open in IMG/M
3300031507|Ga0307509_10049559All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta4501Open in IMG/M
3300031507|Ga0307509_10063338All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida3893Open in IMG/M
3300031507|Ga0307509_10134511All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae2420Open in IMG/M
3300031507|Ga0307509_10172800Not Available2037Open in IMG/M
3300031507|Ga0307509_10811097Not Available600Open in IMG/M
3300031507|Ga0307509_10823582All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa592Open in IMG/M
3300031616|Ga0307508_10033493All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus4637Open in IMG/M
3300031616|Ga0307508_10275286All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa1277Open in IMG/M
3300031616|Ga0307508_10308100Not Available1176Open in IMG/M
3300031616|Ga0307508_10408236Not Available949Open in IMG/M
3300031616|Ga0307508_10692967Not Available627Open in IMG/M
3300031616|Ga0307508_10694472Not Available626Open in IMG/M
3300031616|Ga0307508_10730552Not Available601Open in IMG/M
3300031616|Ga0307508_10815604Not Available551Open in IMG/M
3300031649|Ga0307514_10134118All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Salix → Salix viminalis1698Open in IMG/M
3300031649|Ga0307514_10320923Not Available850Open in IMG/M
3300031649|Ga0307514_10384929Not Available725Open in IMG/M
3300031649|Ga0307514_10561402Not Available523Open in IMG/M
3300031730|Ga0307516_10026010Not Available5949Open in IMG/M
3300031730|Ga0307516_10335244All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae1180Open in IMG/M
3300031730|Ga0307516_10361721Not Available1115Open in IMG/M
3300031730|Ga0307516_10515579Not Available849Open in IMG/M
3300031730|Ga0307516_10987197Not Available513Open in IMG/M
3300031838|Ga0307518_10033379All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida3733Open in IMG/M
3300031838|Ga0307518_10080458Not Available2352Open in IMG/M
3300031838|Ga0307518_10238690Not Available1168Open in IMG/M
3300031838|Ga0307518_10454455All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa683Open in IMG/M
3300031838|Ga0307518_10478895Not Available651Open in IMG/M
3300032354|Ga0325403_1000265All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta32860Open in IMG/M
3300032354|Ga0325403_1066746All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa2118Open in IMG/M
3300032354|Ga0325403_1089899Not Available1402Open in IMG/M
3300032354|Ga0325403_1163213Not Available549Open in IMG/M
3300032354|Ga0325403_1166733Not Available531Open in IMG/M
3300032355|Ga0325401_1127706Not Available1150Open in IMG/M
3300032355|Ga0325401_1204581Not Available642Open in IMG/M
3300032355|Ga0325401_1210417Not Available620Open in IMG/M
3300032374|Ga0325400_1001666All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida18649Open in IMG/M
3300032374|Ga0325400_1094436All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae1994Open in IMG/M
3300032374|Ga0325400_1175739All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae1033Open in IMG/M
3300032389|Ga0325405_1003999Not Available15145Open in IMG/M
3300032389|Ga0325405_1006206All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida12073Open in IMG/M
3300032389|Ga0325405_1008120All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae → Vitis → Vitis vinifera10473Open in IMG/M
3300032389|Ga0325405_1015395Not Available7038Open in IMG/M
3300032389|Ga0325405_1047211Not Available2698Open in IMG/M
3300032389|Ga0325405_1110687All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae717Open in IMG/M
3300032389|Ga0325405_1114285Not Available671Open in IMG/M
3300032389|Ga0325405_1115133Not Available661Open in IMG/M
3300032389|Ga0325405_1127335Not Available543Open in IMG/M
3300032390|Ga0325404_1001638All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa23696Open in IMG/M
3300032390|Ga0325404_1003786Not Available16146Open in IMG/M
3300032390|Ga0325404_1003801Not Available16119Open in IMG/M
3300032390|Ga0325404_1105524Not Available716Open in IMG/M
3300032735|Ga0325410_1040276All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta3246Open in IMG/M
3300032741|Ga0325414_1007796All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida11328Open in IMG/M
3300032741|Ga0325414_1061737Not Available2108Open in IMG/M
3300033159|Ga0326758_114773Not Available735Open in IMG/M
3300033160|Ga0325402_1110650Not Available971Open in IMG/M
3300033180|Ga0307510_10158524Not Available1865Open in IMG/M
3300033180|Ga0307510_10490601Not Available670Open in IMG/M
3300033180|Ga0307510_10526428Not Available626Open in IMG/M
3300034389|Ga0325419_000395Not Available46021Open in IMG/M
3300034389|Ga0325419_002885All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae19371Open in IMG/M
3300034389|Ga0325419_006325All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa12939Open in IMG/M
3300034389|Ga0325419_039387All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus alba3262Open in IMG/M
3300034389|Ga0325419_059756Not Available1893Open in IMG/M
3300034389|Ga0325419_064477Not Available1681Open in IMG/M
3300034389|Ga0325419_074388Not Available1326Open in IMG/M
3300034389|Ga0325419_103502Not Available796Open in IMG/M
3300034389|Ga0325419_111326Not Available713Open in IMG/M
3300034688|Ga0325420_010232All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida8498Open in IMG/M
3300034688|Ga0325420_016070Not Available6417Open in IMG/M
3300034688|Ga0325420_125520Not Available773Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza60.38%
XylemHost-Associated → Plants → Wood → Unclassified → Unclassified → Xylem24.53%
LeafHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Leaf13.21%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment0.94%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.94%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300025327Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)EnvironmentalOpen in IMG/M
3300028786Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EMHost-AssociatedOpen in IMG/M
3300028794Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EMHost-AssociatedOpen in IMG/M
3300030521Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EMHost-AssociatedOpen in IMG/M
3300030522Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EMHost-AssociatedOpen in IMG/M
3300031456Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EMHost-AssociatedOpen in IMG/M
3300031507Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EMHost-AssociatedOpen in IMG/M
3300031616Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EMHost-AssociatedOpen in IMG/M
3300031649Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EMHost-AssociatedOpen in IMG/M
3300031730Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EMHost-AssociatedOpen in IMG/M
3300031838Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EMHost-AssociatedOpen in IMG/M
3300032354Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdKOR-R4Host-AssociatedOpen in IMG/M
3300032355Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdKOR-R2Host-AssociatedOpen in IMG/M
3300032374Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdKOR-R1Host-AssociatedOpen in IMG/M
3300032389Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-Control-R2Host-AssociatedOpen in IMG/M
3300032390Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-Control-R1Host-AssociatedOpen in IMG/M
3300032735Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdIQD-R3Host-AssociatedOpen in IMG/M
3300032741Populus deltoides microbial communities from Bellville, Georgia, United States - Leaf-PdKOR-R3Host-AssociatedOpen in IMG/M
3300033159Hot spring sediment microbial communities from Geyser Creek Basin, Yellowstone National Park, WY, United States - GCR.JH_SEnvironmentalOpen in IMG/M
3300033160Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdKOR-R3Host-AssociatedOpen in IMG/M
3300033180Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EMHost-AssociatedOpen in IMG/M
3300034389Populus deltoides microbial communities from Bellville, Georgia, United States - Leaf-Control-R4Host-AssociatedOpen in IMG/M
3300034688Populus deltoides microbial communities from Bellville, Georgia, United States - Leaf-PdIQD-R1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0209751_1070832613300025327SoilMIFGFVEERICVYSLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0307517_1000443713300028786EctomycorrhizaMIFGFVEERICVYSLLAAASFCSPSFLLAASPFSLSFYMLRNPSLYFTK
Ga0307517_1000577513300028786EctomycorrhizaMEQLLLKIEESMIFGFVEERICVYSLLAAASFCSPSFLLAASPFSLSFYMLRNPSLYFTK
Ga0307517_1003204513300028786EctomycorrhizaMIFGFVEERINVYSLLAAASLCSPSFLLAASLFSLSFYMLRNPSLYFTK
Ga0307517_1020275113300028786EctomycorrhizaEERICVYSLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0307517_1033191213300028786EctomycorrhizaMIFGFVEERICVYSLLAAASFCSPYFLLAASPFSLSFYMLRNPSLYFTK
Ga0307517_1036798713300028786EctomycorrhizaMIFGFVEERICVYSLLAAASFCSPSFLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFT
Ga0307517_1055733113300028786EctomycorrhizaVYSLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0307517_1061922613300028786EctomycorrhizaVEERICVYSLLAAASFCSPSFLLAASPFSLSFYMLKNPSLYFTK
Ga0307515_1000585013300028794EctomycorrhizaMIFGFVEERICVYSLLAAASFCSLFFLLAAASFSLSFYMLRNPSLYFTK
Ga0307515_1001083413300028794EctomycorrhizaMIFGFVEERICVYSLLVAASLCSPSFLLAAASFSLSFYILRNPSLYFTK
Ga0307515_1003854513300028794EctomycorrhizaMIFGFVEERICVYSLLAAASFCSPSFLLAASPFSLSFYMLRNPSFYFTK
Ga0307515_1004903753300028794EctomycorrhizaMEQLLLKIEESMIFGFVEDRICVYSLLAAASFCSPSFLLAASPFSLSFYMLRNPSLYFTKIVLP
Ga0307515_1048940613300028794EctomycorrhizaPCITIEQLLLKIEESMIFGFVEERICVYSLLAAASFCSPSFLMVAASFSLSFYMLRNPSLYFTK
Ga0307515_1050060513300028794EctomycorrhizaERICVYSLLAAASFCSPSFLLAASPFSLSFYMLRNPSLYFTK
Ga0307511_1010222213300030521EctomycorrhizaKIEESMIFGFVEERICVYSLLVAASFCSPSFLLAASPFSLSFYMLRNPSLYFTK
Ga0307511_1012454913300030521EctomycorrhizaKIEESIIFGFVEERICVYSLLATASFCSPSFLLAASPFSFSFYMLRNPSLYFTK
Ga0307511_1014534513300030521EctomycorrhizaCVYSLLAAASFCSLSFLLAAASFSLSFYMLRNPSLYFTK
Ga0307511_1016385513300030521EctomycorrhizaICVYSLLAAASFCSPYFLLAASPFSLSFYMLRNPSLYFTK
Ga0307511_1016921313300030521EctomycorrhizaMIFGFVDERICVYSLLAAASFCSPSFLLAASPFSLSFYMLKNPSLYFTK
Ga0307511_1031169413300030521EctomycorrhizaNEESMIFGFVEERICVYSLLAAASFYSPSFLLAASPFSLSFYMLRNPSLYFTK
Ga0307511_1040853013300030521EctomycorrhizaVEERMCVYSLLAAASFCSPSFLLDAASFSLSFYMLRNPSLYFTK
Ga0307511_1045326513300030521EctomycorrhizaVYSLLGAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0307512_1004496113300030522EctomycorrhizaLLAAASFCSLSFLLAAASFSLSFYMLRNPSLYFTK
Ga0307512_1013373113300030522EctomycorrhizaMILGFVEERICVYSLLAVASFCSPSFLLAASPFSLSFYMLRNHSLYFTK
Ga0307513_1007198433300031456EctomycorrhizaMEQLLLKIAESMIFGFVEDRICVYSLLAAASFCSPSFLLAASPFSLSFYMLRNPSLYFTKIVLP
Ga0307513_1010040173300031456EctomycorrhizaFFGFVEERICVYSLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0307513_1015006913300031456EctomycorrhizaITIEQLLLKNEKSMIFGFVEERIYVYSLLAAASFSLSFYMLRNPSLYFTK
Ga0307513_1028245513300031456EctomycorrhizaNIEESMILGFIEERICVYSLLAAASFCSPSFLLAASPFSLSFYILRNPSLYFTK
Ga0307513_1060273413300031456EctomycorrhizaEQLLLKNEKSMIFGFVEERICVYSLLVAASFCSPSFLLVAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0307513_1062567813300031456EctomycorrhizaFVEERICVYSLLAAASFCSPSFLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0307513_1066579613300031456EctomycorrhizaRICVYSLLAAASFCSPSFLPAAASFSLSFYMLRNPSLYFTK
Ga0307513_1070550923300031456EctomycorrhizaEQLLLKNEKSMIFGFVEERICVYSLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0307513_1100089513300031456EctomycorrhizaIFGFVEERICIYSLLAAASFCSPSFLLAAASFCSSSFLVAAASFSLSFYMLRNPSLYFTK
Ga0307509_1004955913300031507EctomycorrhizaEKSMIFGFVEERICVYSLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0307509_1006333813300031507EctomycorrhizaLLKIEKSMIFGFVEERICVYSLLAAASFCSPSFLMVANPFSLSFYMLRNPSLYFTK
Ga0307509_1013451113300031507EctomycorrhizaMIFGFIEERINVYSLLAAASLCSPSFLLAASLFSLSFYMLRNPSLYFTK
Ga0307509_1017280013300031507EctomycorrhizaCITIEQLLLKIEESMIFGFVEERICVYSLLAAASFCSPYFLLAASPFSLSFYMLRNPSLYFTK
Ga0307509_1081109713300031507EctomycorrhizaFVEERICVYSLLAAASFCPPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0307509_1082358213300031507EctomycorrhizaCITIELLLLKNEKSMIFGFVEERICVYSLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0307508_1003349373300031616EctomycorrhizaMIFGFVEERICVYSLLVAASFCSPSFLLVAASFCSPSFLLAAASFSLSFYMLRNPSLYF
Ga0307508_1027528613300031616EctomycorrhizaMILGFVEEKICVYSLLAAASFCSPSFLLAASPFSLSFYMLRNPSLYFTK
Ga0307508_1030810023300031616EctomycorrhizaERICVYSLLAAASFCSPSFLLAASPFSLSFYMLKNRSFYFTK
Ga0307508_1040823613300031616EctomycorrhizaSMILGFIEERICVYSLLAAASFCSPSFLLAASPFSLSFYILRNPSLYFTK
Ga0307508_1069296713300031616EctomycorrhizaMEQLLLKIEESMIFGFVEERICVYSLLAAASFCSPSFLLAASPFSLSFYILRNHSLYFTK
Ga0307508_1069447213300031616EctomycorrhizaESMIFGFVEERICVYSLLVAASFCSPSFLLAASAFSLSFYMLRNLSLYFTK
Ga0307508_1073055213300031616EctomycorrhizaLLLKNEKSMIFGFVEERICVYSLLAAASFCSPSFLLAASPFSLSFYMLRNPSLYFTK
Ga0307508_1081560413300031616EctomycorrhizaLLRNEESMIFGFVEERICVYSLLAAASFCSPSFLLAASPFSLSFYMLRNPSLYFTK
Ga0307514_1013411813300031649EctomycorrhizaINVYSLLAAASLCSPSFLLAASLFSLSFYMLRNPSLYFTK
Ga0307514_1032092313300031649EctomycorrhizaEKSMIFGFVEERICVYSLLAAASFCSLSFLLAAASFSLSFYMLRNPSLYFTK
Ga0307514_1038492913300031649EctomycorrhizaIFGFVEERICVYSLLAAASFCSPSFLMAANPFSLSFYMLRNPSLYFTK
Ga0307514_1056140213300031649EctomycorrhizaVEERICVFSLLAAASFCSPSFLLAASPFSLSFYMLRNPNLYFTK
Ga0307516_1002601013300031730EctomycorrhizaMIFGFVEERICVYSLLAAASFYSPSFLLAASPFSLSFYMLRNPSLYFTK
Ga0307516_1033524413300031730EctomycorrhizaCITIEQLLLKIEKSMIFGFVEERICVYSLLAAASFCSPSFLMAANPFSLSFYMLRNPSLYFTK
Ga0307516_1036172113300031730EctomycorrhizaLLKNEKSMIFGFVEERIYVYSLLAAASFCSLSFLLAAASFSLSFYMLRNPSLYFTK
Ga0307516_1051557913300031730EctomycorrhizaSLLVAASFCSPSFLLAASPFSLSFYMLRNPSLYFTK
Ga0307516_1098719713300031730EctomycorrhizaMIFGFVEERICVYSLLAAASFCSPSFLLAASFSLSFYMLRNPSLY
Ga0307518_1003337913300031838EctomycorrhizaLLLNNEKSMIFGFVDERICVYSLLAAASFCSPSFLLAASPFSLSFYMLKNPSLYFTK
Ga0307518_1008045823300031838EctomycorrhizaIELLLLKNEKSMIFGFVEERICVFSLLAAASFCSPSFLLAASPFSLSFYMLRNPNLYFTK
Ga0307518_1023869013300031838EctomycorrhizaIEQLVLKNEKSMIFGFVEERICVYSLLAAASFCSLSFLLAAASFSLSFYMLRNPSLYFTK
Ga0307518_1045445513300031838EctomycorrhizaYSLLAAASFCSPSFLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0307518_1047889523300031838EctomycorrhizaTIEQLLLKNEKSMIFGFVEERICVYSLLAAASFCSPSFLLAASFSLSFYMLRNPSLYFTK
Ga0325403_1000265163300032354XylemMEQLLLKIEKSMIFGFVEERICVYSLLTAASFCSPSLLLAASPFSLSFYMLRNPSLYFIK
Ga0325403_106674643300032354XylemGFVEERMCVYSLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0325403_108989913300032354XylemMIFGFVEERICVYSLLAPASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0325403_116321323300032354XylemMIFGLVEERMGVYSLLAAASFCSPSFLLAAASFSLSFYMLRNPILYFTK
Ga0325403_116673313300032354XylemMIFGFVEERICVYSLLAAASFCSPSILLAAASFCSPSILLAAASFSLSFYMLRNPSLYFT
Ga0325401_112770613300032355XylemSLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0325401_120458113300032355XylemMIFGFVEERMGVYSLLAAASFCSPSFLLAAASFSLSFYMLRNPILYFTK
Ga0325401_121041713300032355XylemITIELLLLKNEKSMIFGFVEERMCVYSLLAAASFCSSSFLLAVASFSLSFYMLRNSSLYFTK
Ga0325400_1001666313300032374XylemMIFGFVEERICVYSLLAAGSFCSPSFLLVAASFSLSFYMLRNSSLYFKK
Ga0325400_109443623300032374XylemMIFWFVEERMCVYSLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0325400_117573913300032374XylemIELLLLKNEKNMIFGFVEERMCVYSLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0325405_100399933300032389XylemMIFGFVEERICVYSLLAAASFCSPSFLLAAAPFSLSFYMLRNPSLYFTK
Ga0325405_100620623300032389XylemMIFWFVEERMCVYSLLAAASFCSPSFLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFT
Ga0325405_100812013300032389XylemMILGFVEERICVYSLLAAASLCSPSFLLAAASFSLSFYMLRNLSLYFTK
Ga0325405_101539523300032389XylemVSLQPRKEHDFWVVEERICVYSLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0325405_104721123300032389XylemMIFGFVEERMCVYSLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0325405_111068713300032389XylemSLLAAASFCSPSFLLAVASFSLSFYMLRNPSLYFTK
Ga0325405_111428513300032389XylemIFGFVEERICVYSLLAAASFSLSFYMLRNPSLYFTK
Ga0325405_111513313300032389XylemITIEQLLLKNEKSMIFGFVEERICVYSLLAAASFCSPSFLLAVASFSLSFYMLRNPSLYFTK
Ga0325405_112733523300032389XylemITIELLLLKNEKSMIFGFVEERMCVYSLLAAASFCSPSFLLAVASFSLSFYMLRNPSLYFTK
Ga0325404_1001638213300032390XylemMIFGFVEERMCVYSLLAAASFCPPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0325404_1003786163300032390XylemKIEESMILGFVEERICVYSLLAAASFCSPSFLLAASPFSLSFYILRNPSLYFTK
Ga0325404_1003801123300032390XylemMIFGFVEERICVYSLLAAASFCSPSILLVAASFSLSFYMLRNPSLYFTK
Ga0325404_110552423300032390XylemLLLLKNEKSMIFWFVEERMCVYSLLAAASFCSPSFLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0325410_104027613300032735XylemCVYSLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0325414_100779613300032741LeafGFVEERICVYSLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0325414_106173723300032741LeafMIFGFVEERICVYSLLAAASFFSPSFLLAAASFSLSFSMLRNPSLYFTK
Ga0326758_11477313300033159Hot Spring SedimentSCITIELLLLKNEKSMIFGFVEERICVYSLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0325402_111065013300033160XylemVYSLLAAASFFSPSFLLAAASFSLSFSMLRNPSLYFTK
Ga0307510_1015852413300033180EctomycorrhizaLKNEKSMIFGFVEERICVYSLLDAASFCSPSFLLAAASFSLSLYMLRNPSLYFTK
Ga0307510_1049060113300033180EctomycorrhizaSLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFT
Ga0307510_1052642813300033180EctomycorrhizaITIEQLLLKNEKSMIFGFVEERICVYSLLAAASFCSPSFLLAASPFSLSFYMLRNPSLYFTK
Ga0325419_000395_15995_161443300034389LeafMILGFVEERICVYSLLAAASFCSPSFLLAASPFSLSFYILRNPSLYFTK
Ga0325419_002885_6954_71033300034389LeafMILGFVEERICVYSLLAAASFCSPFFLLAASPFSLSFYMLRNPSLYFTK
Ga0325419_006325_12017_122053300034389LeafMFVEQLLLKNEKSMIFRFVEERMCVYSLLAAASFWSPSFLIAAASFSLSFYMLRNPSLYFTK
Ga0325419_039387_917_10663300034389LeafMILGFVEERICVYSLLAAASFCSPSFLLAASPFSLSFYILKNPSLYFTK
Ga0325419_059756_1591_17403300034389LeafMIFGFVEERISVYSLLAAASFCSPSFLLAAASFSLYFYMLRNPSLYFTK
Ga0325419_064477_680_8533300034389LeafMIFGFVEERICVYFLLAAASFCSPSFLLAAASFSLSFYMLILIVKRIGGKIIKLLII
Ga0325419_074388_1010_11593300034389LeafMIFGFVEERICVYSLLATASFCSPSFLLAAASFSLSFYMLRNPSLYFTK
Ga0325419_103502_57_2063300034389LeafMIFGFVEERICVYSLLAAASFCSPSFLLAAASFSFSFYMLRNRSLYFTK
Ga0325419_111326_93_3083300034389LeafMIFGFVEEIMCVYSLLAAASFCSPSFLLAATSFCSPSFLLAAASFSLSFYMLRNPSLYFTKYSFLELSVYI
Ga0325420_010232_8251_84393300034688LeafMFVEQLLLKNEKSMIFRFVEERMCVYSLLAAASFCSPSFLIAAASFSLSFYMLRNPSLYFTK
Ga0325420_016070_6115_62643300034688LeafMIFGFVEERICVYSLLAAASFCSPSFLLAVASFSLSFYMLRNPSLYFTK
Ga0325420_125520_79_2283300034688LeafMIFWFVEERICVYSLLAAASFCSPSFLLAAASFSLSFYMLRNPSLYFTK


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