Metagenome / Metatranscriptome Family F092818

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092818
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	94 residues
Representative Sequence	MKLVRSSISIVNGLPCEKVRSAPAIIVSGPAQRLLTLWPARSPSRLATLSIESSDSFVASAAVSIATGWNEPVPGRELHPLKSSAFHGA
Number of Associated Samples	96
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.98 %
% of genes near scaffold ends (potentially truncated)	85.05 %
% of genes from short scaffolds (< 2000 bps)	76.64 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.589 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (10.280 % of family members)
Environment Ontology (ENVO)	Unclassified (31.776 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.271 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.26% β-sheet: 6.84% Coil/Unstructured: 82.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF08388	GIIM	12.15
PF13229	Beta_helix	4.67
PF00078	RVT_1	3.74
PF12704	MacB_PCD	1.87
PF09685	DUF4870	0.93
PF13590	DUF4136	0.93
PF12697	Abhydrolase_6	0.93
PF08240	ADH_N	0.93
PF01548	DEDD_Tnp_IS110	0.93
PF05569	Peptidase_M56	0.93
PF00069	Pkinase	0.93
PF13546	DDE_5	0.93
PF13414	TPR_11	0.93
PF01565	FAD_binding_4	0.93
PF00589	Phage_integrase	0.93
PF00266	Aminotran_5	0.93
PF01738	DLH	0.93
PF13646	HEAT_2	0.93
PF00440	TetR_N	0.93
PF02737	3HCDH_N	0.93
PF01520	Amidase_3	0.93
PF00072	Response_reg	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.74
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.93
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.93
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.93
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.93
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.93
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.59 %
Unclassified	root	N/A	8.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.59 %
Unclassified	root	N/A	8.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.59 %
Unclassified	root	N/A	8.41 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	57.01 %
Unclassified	root	N/A	8.41 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	22.43 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.95 %
Unclassified	root	N/A	8.41 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	21.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.95 %
Unclassified	root	N/A	8.41 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.93 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	21.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.95 %
Unclassified	root	N/A	8.41 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.93 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.95 %
Unclassified	root	N/A	8.41 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	6.54 %
Acidisarcina	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina	5.61 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.93 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.95 %
Unclassified	root	N/A	8.41 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	6.54 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	5.61 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.93 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.95 %
Unclassified	root	N/A	8.41 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	6.54 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	5.61 %
Singulisphaera acidiphila	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	0.93 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000837\|AP72_2010_repI_A100DRAFT_1003037	All Organisms → cellular organisms → Bacteria	2373	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1002190	All Organisms → cellular organisms → Bacteria → Acidobacteria	4197	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1081558	Not Available	511	Open in IMG/M
3300000953\|JGI11615J12901_10538765	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300001401\|JGI20189J14885_1005083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	2400	Open in IMG/M
3300001417\|JGI20196J14858_1012170	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	720	Open in IMG/M
3300001471\|JGI12712J15308_10000396	All Organisms → cellular organisms → Bacteria → Acidobacteria	13079	Open in IMG/M
3300002907\|JGI25613J43889_10030334	All Organisms → cellular organisms → Bacteria → Acidobacteria	1531	Open in IMG/M
3300003351\|JGI26346J50198_1004643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1310	Open in IMG/M
3300003505\|JGIcombinedJ51221_10031525	Not Available	1934	Open in IMG/M
3300004136\|Ga0058889_1425298	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	636	Open in IMG/M
3300004473\|Ga0068919_1414259	Not Available	2024	Open in IMG/M
3300004633\|Ga0066395_10062619	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1686	Open in IMG/M
3300004633\|Ga0066395_10271739	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300005171\|Ga0066677_10235875	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300005172\|Ga0066683_10437305	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300005186\|Ga0066676_10497246	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300005276\|Ga0065717_1010036	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	632	Open in IMG/M
3300005332\|Ga0066388_100119535	All Organisms → cellular organisms → Bacteria	3153	Open in IMG/M
3300005332\|Ga0066388_100415006	All Organisms → cellular organisms → Bacteria	1990	Open in IMG/M
3300005334\|Ga0068869_100024777	All Organisms → cellular organisms → Bacteria	4158	Open in IMG/M
3300005435\|Ga0070714_100947770	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300005436\|Ga0070713_101570962	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	638	Open in IMG/M
3300005439\|Ga0070711_101097347	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300005450\|Ga0066682_10673459	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300005467\|Ga0070706_100141622	All Organisms → cellular organisms → Bacteria → Proteobacteria	2244	Open in IMG/M
3300005468\|Ga0070707_100256850	All Organisms → cellular organisms → Bacteria	1700	Open in IMG/M
3300005518\|Ga0070699_100171007	All Organisms → cellular organisms → Bacteria	1925	Open in IMG/M
3300005526\|Ga0073909_10025318	All Organisms → cellular organisms → Bacteria	1978	Open in IMG/M
3300005553\|Ga0066695_10122857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1605	Open in IMG/M
3300005602\|Ga0070762_10136604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1455	Open in IMG/M
3300005602\|Ga0070762_11211047	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300005764\|Ga0066903_101824359	Not Available	1162	Open in IMG/M
3300005764\|Ga0066903_102582331	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300006028\|Ga0070717_11605053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	589	Open in IMG/M
3300006163\|Ga0070715_10020328	All Organisms → cellular organisms → Bacteria	2559	Open in IMG/M
3300006358\|Ga0068871_101035641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	765	Open in IMG/M
3300006755\|Ga0079222_10343057	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300006806\|Ga0079220_10595978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300006864\|Ga0066797_1318854	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	543	Open in IMG/M
3300006914\|Ga0075436_100270926	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1212	Open in IMG/M
3300007076\|Ga0075435_100432156	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300009519\|Ga0116108_1015773	All Organisms → cellular organisms → Bacteria → Acidobacteria	2683	Open in IMG/M
3300010048\|Ga0126373_10251474	All Organisms → cellular organisms → Bacteria	1740	Open in IMG/M
3300010048\|Ga0126373_10345615	All Organisms → cellular organisms → Bacteria → Acidobacteria	1498	Open in IMG/M
3300010360\|Ga0126372_10016484	All Organisms → cellular organisms → Bacteria → Acidobacteria	4199	Open in IMG/M
3300010360\|Ga0126372_10477538	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1164	Open in IMG/M
3300010361\|Ga0126378_12959682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300010366\|Ga0126379_10183302	Not Available	1993	Open in IMG/M
3300010371\|Ga0134125_11209624	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	826	Open in IMG/M
3300010397\|Ga0134124_10190452	All Organisms → cellular organisms → Bacteria → Acidobacteria	1855	Open in IMG/M
3300010863\|Ga0124850_1048308	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300012363\|Ga0137390_10941738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M
3300012971\|Ga0126369_10779421	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1037	Open in IMG/M
3300014657\|Ga0181522_11050915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300015373\|Ga0132257_104412764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300016341\|Ga0182035_12061997	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	518	Open in IMG/M
3300016730\|Ga0181515_1327659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300017823\|Ga0187818_10498789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300017938\|Ga0187854_10033669	All Organisms → cellular organisms → Bacteria → Acidobacteria	2683	Open in IMG/M
3300017943\|Ga0187819_10514003	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300017948\|Ga0187847_10132446	All Organisms → cellular organisms → Bacteria → Acidobacteria	1365	Open in IMG/M
3300017970\|Ga0187783_10513331	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300017970\|Ga0187783_11172926	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300018018\|Ga0187886_1042384	All Organisms → cellular organisms → Bacteria → Acidobacteria	2175	Open in IMG/M
3300018046\|Ga0187851_10152545	All Organisms → cellular organisms → Bacteria → Acidobacteria	1398	Open in IMG/M
3300019264\|Ga0187796_1054352	All Organisms → cellular organisms → Bacteria → Acidobacteria	703	Open in IMG/M
3300019878\|Ga0193715_1009916	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2037	Open in IMG/M
3300021178\|Ga0210408_11073891	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	620	Open in IMG/M
3300021180\|Ga0210396_11267921	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	614	Open in IMG/M
3300021407\|Ga0210383_11742854	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	509	Open in IMG/M
3300021420\|Ga0210394_10957315	All Organisms → cellular organisms → Bacteria → Acidobacteria	743	Open in IMG/M
3300022499\|Ga0242641_1013527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300022524\|Ga0224534_1019089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1854	Open in IMG/M
3300025320\|Ga0209171_10279141	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300025439\|Ga0208323_1011249	All Organisms → cellular organisms → Bacteria → Acidobacteria	2194	Open in IMG/M
3300025460\|Ga0208562_1016283	All Organisms → cellular organisms → Bacteria → Acidobacteria	1826	Open in IMG/M
3300027545\|Ga0209008_1001021	All Organisms → cellular organisms → Bacteria	7352	Open in IMG/M
3300027874\|Ga0209465_10004539	All Organisms → cellular organisms → Bacteria	6032	Open in IMG/M
3300027874\|Ga0209465_10168693	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300028799\|Ga0307284_10250710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	704	Open in IMG/M
3300029917\|Ga0311326_10429173	Not Available	653	Open in IMG/M
3300030503\|Ga0311370_10987603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300030598\|Ga0210287_1145679	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	616	Open in IMG/M
3300031231\|Ga0170824_118808029	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	729	Open in IMG/M
3300031231\|Ga0170824_119168700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	556	Open in IMG/M
3300031446\|Ga0170820_10016509	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	585	Open in IMG/M
3300031474\|Ga0170818_103319403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	562	Open in IMG/M
3300031474\|Ga0170818_108521452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300031708\|Ga0310686_111754264	All Organisms → cellular organisms → Bacteria → Acidobacteria	4238	Open in IMG/M
3300031744\|Ga0306918_10050927	All Organisms → cellular organisms → Bacteria	2749	Open in IMG/M
3300031753\|Ga0307477_10012168	All Organisms → cellular organisms → Bacteria	5893	Open in IMG/M
3300031820\|Ga0307473_10043060	Not Available	2077	Open in IMG/M
3300031823\|Ga0307478_11103058	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300031879\|Ga0306919_10075643	All Organisms → cellular organisms → Bacteria	2306	Open in IMG/M
3300031912\|Ga0306921_10456682	All Organisms → cellular organisms → Bacteria → Acidobacteria	1488	Open in IMG/M
3300031945\|Ga0310913_10787041	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	671	Open in IMG/M
3300031946\|Ga0310910_11461595	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300032055\|Ga0318575_10380148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300032094\|Ga0318540_10016838	All Organisms → cellular organisms → Bacteria	2981	Open in IMG/M
3300032174\|Ga0307470_10936932	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300032205\|Ga0307472_100333627	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300032211\|Ga0310896_10745061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300032828\|Ga0335080_10234965	Not Available	2007	Open in IMG/M
3300033289\|Ga0310914_11077565	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300033412\|Ga0310810_11044640	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.39%
Host-Associated	Host-Associated	5.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.24%
Aquatic	Environmental → Aquatic	12.15%
Plants	Host-Associated → Plants	5.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.44%
Freshwater	Environmental → Aquatic → Freshwater	11.21%
Peat	Environmental → Terrestrial → Peat	2.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.87%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.93%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.40%
Loam	Environmental → Terrestrial → Soil → Loam	23.36%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.21%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.87%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.74%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.87%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	7.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.54%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.74%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.87%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.87%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.87%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.87%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.93%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.93%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.93%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001401	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012	Environmental	Open in IMG/M
3300001417	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300003351	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004136	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF214 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004473	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005276	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300019264	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025439	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)	Environmental	Open in IMG/M
3300025460	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030598	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE048SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A100DRAFT_10030371	3300000837	Forest Soil	MELVRSPLSIVVGLPCEKVRSAPAIVVSGPAQRSLTLWPARSRSRLATLSIESSDSFVASVAVSIATGWSEPVPGGSFTR*
AP72_2010_repI_A001DRAFT_10021902	3300000893	Forest Soil	MELVRSSLSIVSGFPCEKVRSAPAFVVSGPAQRLLTLRPARSRSRLATLSIESSDSLVASATASIATGWSEPVPGRELHPLKSSAFHGALFRQPIG*
AP72_2010_repI_A001DRAFT_10815582	3300000893	Forest Soil	LHAIAIIPAGPMELVRSSLSIVSGLPCEKVRSAPAIVVSGPAQRSLMLWPARSRSCLATLSIESSDSFVASTIVSIATGWSEPVPGGSCTH*
JGI11615J12901_105387651	3300000953	Soil	MELVRSSISIVSGLPCVTVRSAPAIIVSGPAQRSLTLWPARSRGRLATLSIESSDSFVASTAVSIATGWNEPVPGRELHPLKSSAFHGA
JGI20189J14885_10050832	3300001401	Arctic Peat Soil	MELIRSSVSIAIGLPREKVRSAPAIVFSGPAQRSLTLRPARSRSRQATLYIESSDSFVASAAASITGWSEPVPGRELHPLKSSAFHGALFRQLTLGISLASSDTAGVQLARRNQ*
JGI20196J14858_10121702	3300001417	Arctic Peat Soil	MELVRSSLSIVSGLPCVTVRSAPAIVVSGPAQRSLTLWPVRSPSRLATLYIESSDSFVASAAVSIVTGWSEPVPGRELHPLKSSAFHG
JGI12712J15308_100003965	3300001471	Forest Soil	MELVRSTISIASGLPRETVRSAPAIIFSGPTQRSLTLRPARSRSRQATLYTESSDSFVASAAASIATGWSEPVPGRELHPL*
JGI25613J43889_100303342	3300002907	Grasslands Soil	MVPFCLHAVANTPAGLMEFIRSYDSISFGLPTNRGGSAPALSVSGPAQRSLTLRPARSPSRLATLCTRGFSSLVASTAALIATGWSEPVP
JGI26346J50198_10046431	3300003351	Bog Forest Soil	MELVRSSLSIPSGLACEKVRLAPAIVFSGPAQRSLMLWPARSPSRQATLYTESSDSFVASAAASIATGWSEPVPGRE
JGIcombinedJ51221_100315253	3300003505	Forest Soil	MELVRSSFSIANGLPCETVRSAPAIIVSGPAQRLLSLWPARSPSRLATLFIESSDSFVASAAVSIVTGWNEPVPGRELHPLESSAFHGAL
Ga0058889_14252981	3300004136	Forest Soil	MELVRSSISIDSGLPCEKVRSAPAIVFSRPAQRSLMLRPARSRSRQATLSIESSDSFVASAAASIATGWSEQVPGRELHPLKSSAF
Ga0068919_14142592	3300004473	Peatlands Soil	MELVRSFVSIVSGLPCEKVRSAPAIIVSGPAQRSLTLWPARSPSRLTTLSIESSDSFVASAAVSIATGWNEPVPGRELHPLKSSAFHGALYRQLSIL
Ga0066395_100626191	3300004633	Tropical Forest Soil	SGLLCLHAVAIIPVGPMKLVRSSFSIVSGLPCEKVRSAPAIIVSRPAQRLLTLRPARSRSRHATLSIESSHSFVASTAASIATGWSEPVPGRELHPLKSSAFHGALFRQLTNHRFELRINHLRLVSTLLHFYPIVPK*
Ga0066395_102717392	3300004633	Tropical Forest Soil	MKLVRSSIFIVSGFPCEKVRSAPAIVVSGPAQRSLPLWPARSRSRLATLSIESSDSLVASAAVSIATGWNEPVPGRELHPLKSSAFHGALLRQLRLSRIGCFLSG
Ga0066677_102358752	3300005171	Soil	TPAGSMKLVRSSVSIDCGLPCDKARSVPAIIFSRPAQRSLALRPARSPSRQATLYTEGSDSFVASAAASIATGWSEQFPGGTFTRGGPALFHGARAIWI*
Ga0066683_104373051	3300005172	Soil	MDSGLPCVTVRSAPAIVFSGPAQRSLTLWPVRSPSRLATLYIESSDSFVASAAASIATGWSEPVPGRELHPLKSSAF
Ga0066676_104972461	3300005186	Soil	MELVRSFISTVSGLPCVTVRSAPALVLSGPAQRSLTLRPARSPSRLATLYIESSDSFVASTAASIATGWSEPVPGRELHPLKSSAFHGA
Ga0065717_10100361	3300005276	Arabidopsis Rhizosphere	MKLVRSSISIVCGLPCETVRSAPAIVFSGPAQRSLTLWPARSPSRLATLYIESSDSFVASAAVSIATGWSEPVPGRELHPLKSSAFHGALFRQLSNNPQGSSPACFIEEVDDRVR
Ga0066388_1001195352	3300005332	Tropical Forest Soil	MELVRSPISIVSGLPCEKVRSAPAMIVSGPAQRLLTFWPARSPSRLATLSIESSGSFVASAIVSIATGWSELVPGRELHPLKPNAFHGALFRQLTNTVSELRINYLRLVSTLLHFYPIVP
Ga0066388_1004150062	3300005332	Tropical Forest Soil	MGLPVLRLVSYAYMIAIIPAGPMELVRSSISIVNGLPCVTVRSAPAIVVSGPAQRLLTLWPARSRSRLATLSIESSDSFVASAIVSIATGWSEPVPGRELHPLKPSAFHGA
Ga0068869_1000247771	3300005334	Miscanthus Rhizosphere	MELVRSSISIVVGLPCVTVRSAPAIIVSGPAQRLLTLRPARSPSRHATLYTESSDSFVASAAASIATRWSEPVPGRELHPLKSSAFHGA
Ga0070714_1009477702	3300005435	Agricultural Soil	MELVRSFVSIVSGLPCEKVRSAPAIIVSGPAQRSLTLWPARSPSRQATLYIESFGSFVASVAVSIATGWSEPVPGRESHPLKSSAFHGALFRQQ
Ga0070713_1015709621	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MELVRSSVSIVSGLPCEKVRSAPAIIVSGPAQRSLVLWPACSPSRHATLSIEGFDSFVASAAASIATGWNEPVPGRELHPLKSSAFHGA
Ga0070711_1010973472	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKLVRSSISIVCGLPCETVRSAPAIVVSGPAQRSLTLWPARSPSRLATLYIESSDSFVASAAVSIATGWSEPVPGR
Ga0066682_106734591	3300005450	Soil	MELVRSSISIASGLPRETVRSAPAIIFPGPAQRSLTLRPARSRSRQATLYTQSSDSFVASAAASIATGWSEPVPGRELHPL
Ga0070706_1001416221	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MEPIRSSLSTVSGLPCVTVRSAPAIVFSGPAQRLLTLWPARSPSRLATLYTEGSDSFVTSTAASIATGWSEPVPGRELHPLKSSAFHGALLRQ
Ga0070707_1002568501	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKLIRSSLSIDGGLPCEKVRSAPATVFSRPAQRLLTLWPARSPSRHATLYIESSDSFVASAAASIATGWSEPVPGRELHPLKSSAFHGALFRQLTDSFRIADQY*
Ga0070699_1001710072	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MELVRSFVSIVSGLPCEKVRSAPAIIVSGPAQRSLTLWPARSPSRQATLYIESSGSFVASVAVSIATGWSEPVPGRESHPLKSSAFHGALFRQ
Ga0073909_100253182	3300005526	Surface Soil	MKLVRSSISIVCGLPCEKVRSAPAIVFSGPAQRSLTLWPARSPSRLATLYIESSDSFVASAAVSIATGWSEPVPGRELHPLKSSAFHGALYRQLSRPWLLDLQSFFFHNV*
Ga0066695_101228574	3300005553	Soil	VAITPAGSMELVRSSISIASGLPRETVRSAPAIIFPGPAQRSLTLRPARSRSRQATLYTQSSDSFVASAAASIATGWSEPVPGRELHPL*
Ga0070762_101366043	3300005602	Soil	SELIRSSVSIASGLLRETIRSAPAITFRACSAVHSLYGLRARGVAKATLCTESSDSFVASAAASGATGWSEPVPGRELHPL*
Ga0070762_112110471	3300005602	Soil	MELVRSSLFIVSGLPCEKVRSAPAIVVSGPAQRSLSLWPARSPSRLATLYIESSDSFVASAAVSIVTGWSEPVPGRELHPLKSSAFHGAL
Ga0066903_1018243591	3300005764	Tropical Forest Soil	MEFVRSSISIASGLPCVTVRSAPAITFSGHAQRLLVLRPVRSPSHQVTLYTESSDSFVASAVASIATGWSEPVPGRELHPLKSSAFHGALLR
Ga0066903_1025823311	3300005764	Tropical Forest Soil	MELVRSSISIVNGLPCVTVRSAPAIVVSGPAQRLLTLWPARSRSRLATLSIESSDSFVASAIVSIATGWSEPVPGRELHPLKPSAFHGA
Ga0070717_116050531	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MELIRSSISIVSGLPCEKVRSAPAIIVSGPAQRSLTLWPARSPSRLATLYTEGSDSFVASAAASIATGWSEPVPGRELHPLKSSAF
Ga0070715_100203281	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MELVRSSVSIVSGLPCEKVRSAPAIIVSGPAQRSLVLWPACSPSRHATLSIEGFDSFVASAAASIATGWNEPVPGRELHPLKSSAFHGALF
Ga0068871_1010356412	3300006358	Miscanthus Rhizosphere	MKLVRSSISIVCGLPCEKVRSAPAIVFSGPAQRSLTLWPARSPSRLATLSIESSDSFVASAAVSIATGWSEPVPGRELHPLKSSAFHGALFRQPDLASGVPTIQQVT*
Ga0079222_103430572	3300006755	Agricultural Soil	MEFIRSYDSISFGLPTNRGGSAPALTVSGPAQRSLTLRPARSPSRLATLYTRGFSSLVASTAALIATGWSEPVPGR
Ga0079220_105959781	3300006806	Agricultural Soil	SSLSIVSGLPCEKVRSAPAIIVSGPAQRSLTLWPARSPSRQATLYIESSGSFVASVAVSIATGWSEPVPGRESHPLKSSAFHGALFRQLRGVRLRP*
Ga0066797_13188541	3300006864	Soil	MELVRSSLSIPSGLPRVTVRSAPAIVFSGPAQRLLTLWPARSPSRQATLYTEGSDSFVASAAASIATGWSEPVPGRELHPLKSSAFHGALL
Ga0075436_1002709262	3300006914	Populus Rhizosphere	MKLVRSSISIVCGLPCETVRSAPAIVVSGPAQRSLTLWPARSPSRLATLYIESSDSFVASAAVSIATGWSEPVPGRELHPLKSSAFHGALFRQPDLASGVPTIQQVT*
Ga0075435_1004321562	3300007076	Populus Rhizosphere	MQLVRSFVSIVSGLPCEKVRSAPAIIVSGPAQRSLTLWPARSPSRQATLSIESSGSFVASVAVSIATGWSEPVPGRESHPLKSSAFHGAYFANYVAFVSGPKRMK*
Ga0116108_10157732	3300009519	Peatland	SGLLCVHAIAITPAGPMELVRSSVSIASGLPRVTVRSAPAIIFPGPAQRSLTLRPARSRSRHATLYTESSDSFVASAVASIATGWSEPVPGRELHPL*
Ga0126373_102514741	3300010048	Tropical Forest Soil	MERVRSSLSIGSGLPRVTVGSAPAITFSGPAQRSLTLRPVRSPSRLATLYTESSDSFVASAAASIATGWSEPVPGR
Ga0126373_103456152	3300010048	Tropical Forest Soil	MELVRSSLSIVSGLPCVTVRSAPAIVFSGPAQRSLTLWPARSPSRQATLYIESSDSFVASAAASIATGWSEPVPGREFHPLKSSAIHGALSRQLAVSRRV*
Ga0126372_100164841	3300010360	Tropical Forest Soil	MELVRSLISIVRGLPGVTVRSAPAITVSGPAQRLLTLWPARSRSRLATLSIESSDSFVASAAASIATGWSEPVPGRELHPLKSSAFH
Ga0126372_104775383	3300010360	Tropical Forest Soil	MEFVRSSISIVGGLPCVTVRSAPAIIVSGPAQRSLTLRPARSRSRLATLSIESSDSFVASTIVSIATGWSEPVPGRELHPLKSSAFHGALLR
Ga0126378_129596822	3300010361	Tropical Forest Soil	MELIRSSISIVSGLPCVTVRSAPAIIVSGPAQRLLTLWPARSRSRLATLYTESSDSFVASAAASIATGWSEPVPGVGIEP
Ga0126379_101833021	3300010366	Tropical Forest Soil	MELVRSSISIVNGLPCVTVRSAPAIVVSGPAQRLLTLWPARSRSRLATLSIESSDSFVASAIVSIATGWSEPVPGRELHPLKPSAFHGAL
Ga0134125_112096242	3300010371	Terrestrial Soil	YVHAIAITPAASMELIRSSISIVGGLPCVTVRSAPAIVFSGPAQRSLTLRPARSRSRQATLYTESSDSFVASAAASIATGWSEPVPGRELHPL*
Ga0134124_101904522	3300010397	Terrestrial Soil	ACSLVSLHDGGLPCVTVRSAPAIVFSGPAQRLLTLWPARSPSRHATLYTESSDSFVASAAVSIATGWSEPVPGRELHPLKSSAFHGALLRQL*
Ga0124850_10483083	3300010863	Tropical Forest Soil	MELVRSPISIVSGLPCEKVRSAPAMIVSGPAQRLLTFWPARSPSRLATLSIESSGSFVASAIVSIATGWSELVPGRELHPLKPNAFHGAL
Ga0137390_109417381	3300012363	Vadose Zone Soil	VHAIAITPAGSMELVRSSVSIASGLPRVTVRSAPAIVFSGPAQRSLTLRPARSRSRLATLYTESSDSFVASAAASIATGWSEPVPGRELHPL*
Ga0126369_107794212	3300012971	Tropical Forest Soil	SIVSGLPCEKVRSAPAIVVSGPAQRLLTLWPARSPSRLATLSIESSDSLVAYVVVSIATGWSEPVPGREFHPLKSSAFHGALFRQLWVLSVVADGSSSSENLL*
Ga0181522_110509151	3300014657	Bog	MELIRSSLSIPSGLPCVTVRSAPAIVFSGPAQRSLALWPARSRSRHATLYTEGSDSFVASAAASIATGWSEPVPGRDFHPLKTSAFHGAQLDPFQAGANTTQPADGLQRGGILEM
Ga0132257_1044127641	3300015373	Arabidopsis Rhizosphere	MELVRSSVSIVSGLPCEKVRSAPAIIVSGPAQRSLVLWPACSPSRHATLSIEGFDSFVASAAASIATGWNEPVPGRELHPLKS
Ga0182035_120619971	3300016341	Soil	MELVRSSLSIVSGLPCEKVRSAPAIVVSGPAQRSFPLWPARSRSRLATLSIESSDSFVPSTAVSIATGWSEPVPGRELHPLKSSAFHGA
Ga0181515_13276592	3300016730	Peatland	MELIRSSLSIPSGLPCVTVRSAPASTFSGPAQRSLALWPARSRSRHATLYTEGSDSFVASAAASIASGWSEPVPGRDLHPLKSSAFHGALLR
Ga0187818_104987891	3300017823	Freshwater Sediment	PAGSMEHIRSWFSIASGLPCVTVRSAPAITVSGPAQRSLTLWPARSPSRQATLYTESSDSFVASDAVSIATGWNEPVPRAGVSPAEVQRLFTAHCYAN
Ga0187854_100336692	3300017938	Peatland	SGLLCVHAIAITPAGPMELVRSSVSIASGLPRVTVRSAPAIIFPGPAQRSLTLRPARSRSRHATLYTESSDSFVASAVASIATGWSEPVPGRELHPL
Ga0187819_105140031	3300017943	Freshwater Sediment	TVRSAPAIVFSGPAQRSLTLRPARSPSRLATLYIEGSDSFVASTAASIATGWSEPVPGREFHPLKSSAFHGALFHQLLVRRAVKFIALIDLREY
Ga0187847_101324461	3300017948	Peatland	ELVRSSVSIASGLPRVTVRSAPAIIFPGPAQRSLTLRPARSRSRHATLYTESSDSFVASAVASIATGWSEPVPGRELHPL
Ga0187783_105133312	3300017970	Tropical Peatland	MELVRSSLSIVGGLPRVTVRSAPAVIVSGPAQRSLTLWPARSRSRLATLSIESFDSFVASAAVSIATGWNEPVPGRELHPLKSSAFHGALLRQ
Ga0187783_111729261	3300017970	Tropical Peatland	LVRSSFSIDCGLPCVTVRSAPAIIVSGPAQRSLTLWPTRSRSRLATLSIESSDSIVASAAASIATGWSESVPGRELHPLKSSAFHGALLHQPSILNFLKPSRFIDLPSTQS
Ga0187886_10423842	3300018018	Peatland	CVHAIAITPAGPMELVRSSVSIASGLPRVTVRSAPAIIFPGPAQRSLTLRPARSRSRHATLYTESSDSFVASAVASIATGWSEPVPGRELHPL
Ga0187851_101525451	3300018046	Peatland	HAIAITPAGSMELGRSSISIVSGFPRVTVRSAPAIIFPGPAQRSLTLRPARSRSRHATLYTESSDSFVASAVASIATGWSEPVPGRELHPL
Ga0187796_10543521	3300019264	Peatland	MELVRSSLSIVGGLPCEKVRSAPAIIVSGPAQRLLTLWPARSRSRLATLSIESSDRFVASTAASIATGWNEPVPGRELHPLKSSAF
Ga0193715_10099161	3300019878	Soil	MELVRSSISIVNGLPCEKVRSAPAIIVSGPAQRLLTLWPARSPSRLATLSIESSDSFVASAAVSIATGWNEPVPGRELHPLKSSAFHGALFHQLG
Ga0210408_110738911	3300021178	Soil	AITPAGPTELVRSSVSIVNGLPCVTVRSAPAIIVSGPAQRSLTLWPARSPSRLTTLSIESSDRFVASAAVSIATGWNEPVPGRELHPLKSSAFSRRTITSIDI
Ga0210396_112679211	3300021180	Soil	MKLVRSSLSIPSGLPCVTVRSAPAIIVSGPAQRSLPLWPARSRSRLATLSIESSDSFVASTAVSIATGWNEPVPGRELHPLKSNAFHGALLRQLMISSVVL
Ga0210383_117428541	3300021407	Soil	MELVRSCLSIHSGLPCEKVRSAPAIVFSGPAQRSLTLWPARSPSRHATLYTEGSDSFVASAAASIATGWSEPVPGRELHPL
Ga0210394_109573151	3300021420	Soil	MELVRSSISIVGGLPREKVGSAPATVFSGPAQRSLTLWPARSPSRLATLYIESSDSFVASAAVSIATGWSEPVPGRELHPLK
Ga0242641_10135271	3300022499	Soil	MELVRSCLSIHSGLPCEKVRSAPAIVFSGPAQRSLTLWPARSPSRHATLYTEGSDSFVASAAASIATGWSEPVPGRELHPLKSSAFHGARVESRTGAVALAS
Ga0224534_10190891	3300022524	Soil	MELVRSSVSIVSGLPCEKVRSAPAIVFSGPAQRLLTLWPVRSPSRLATLYTESSDSFVTSAAASIATGWSEPVPGRELHPLKSSAFHGALFRQL
Ga0209171_102791412	3300025320	Iron-Sulfur Acid Spring	MELVRSSVSIASGLPRVTVRSAPAIVFSGPAQRSLMLWPARSRSRQATLYTESSDSFVASAAASIASGWSEPVPGRELHPLES
Ga0208323_10112491	3300025439	Peatland	LLCVHAIAITPAGPMELVRSSVSIASGLPRVTVRSAPAIIFPGPAQRSLTLRPARSRSRHATLYTESSDSFVASAVASIATGWSEPVPGRELHPL
Ga0208562_10162831	3300025460	Peatland	ITPAGPMELVRSSVSIASGLPRVTVRSAPAIIFPGPAQRSLTLRPARSRSRHATLYTESSDSFVASAVASIATGWSEPVPGRELHPL
Ga0207700_102336612	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MELVRSSVSIGSGLPPVIVRSAPATTFSGPAQRSLTLRPARSRSRQATLYIESSDSFVASAADSIATGWS
Ga0209008_100102111	3300027545	Forest Soil	MELVRSSISIDCGLPYVTVRAAPAIVFSGPAQRSLTLRSARSPSRHATLYVESSDSFVASAAASIASTGWSEPVPGAGVAPAEVQHLSRRT
Ga0209465_100045395	3300027874	Tropical Forest Soil	MELVRSSISIVNGLPCVTVRSAPAIVVSGPAQRLLTLWPARSRSRLATLSIESSDSFVASAIVSIATGWSEPVPGRELHPLKPSAFHGALLRQLSFDLLFRQT
Ga0209465_101686931	3300027874	Tropical Forest Soil	MKLVRSSIFIVSGFPCEKVRSAPAIVVSGPAQRSLPLWPARSRSRLATLSIESSDSLVASAAVSIATGWNEPVPGRELHPLKSSAFHGALFHQPTGGLPGSGSLG
Ga0307284_102507102	3300028799	Soil	MEPVRSSVSIVSGLPCDKARSAPAIVVSGPAQRSLSLWPARSRSRLATLSIESSDSFVASAAVSIATGWNEPVPGRELHPLKSSAFHGALFRPIMRGTELWAFTDTRLCDW
Ga0311326_104291731	3300029917	Bog	PSITIGLPRRIGGSAPALVFSRPAQRLITLRPARLPSRQATLYTEGFNGFVASAIASIATGWNEPVPGRGSPRC
Ga0311370_109876033	3300030503	Palsa	LLCVDAIAITPAGSMELIRSSVSIASGLPRETVRSAPAITFSGPAQRSLRLRPARSLSRQETLYPESSDSFVASFAVSVATGWSEPVPGRELHRL
Ga0210287_11456791	3300030598	Soil	MEFVRSYASISFGLPRNRGGSAPASLFSGPAQRSLTLRPARSPSRLATLYTRGFSSLVASTAALIVTGWSEPVPGRVTPAVDHHLSRRTQ
Ga0170824_1188080291	3300031231	Forest Soil	MELVRSFIPIVGGLPCDKARSAPAIVFSGPAQRLLTLRPVRSPSRLATLYIESSDSFVASAAVSIATGWNEPVPGRELHPLKSSAFSRRT
Ga0170824_1191687001	3300031231	Forest Soil	MKLVRSSISIVNGLPCEKVRSAPAIIVSGPAQRLLTLWPARSPSRLATLSIESSDSFVASAAVSIATGWNEPVPGRELHPLKSSAFHGA
Ga0170820_100165091	3300031446	Forest Soil	MKLVRSSISIVNGLPCEKVRSAPAIIVSGPAQRLLTLWPARSPSRLATLSIESSDSFVASAAVSIATGWNEPVPGRELRPLKSSAFHGALFRQLCLQPWKK
Ga0170818_1033194031	3300031474	Forest Soil	MKLVRSSISIVNGLPCEKVRSAPAIIVSGPAQRLLTLWPARSPSRLATLSIESSDSFVASAAVSIATGWNEPVPGRELHPLKSSAFHGALF
Ga0170818_1085214521	3300031474	Forest Soil	LLCGHAVAITPAGSMELVRSSVSIVGGLPRETVRSAPAIVFSGPARRSLELRPARSRSRLATLYTESSDSFVASAAASIATGWSEPVPGRELHPL
Ga0310686_1117542641	3300031708	Soil	MELVRSSISIGSGPPRVALRSAPAIIFLGPAQRSLTLWPASSRSRQATLYTESSDSFVASPAVSIATGWSEPVPGRE
Ga0306918_100509273	3300031744	Soil	MKLVRSSFSIVSGLPCEKVRSAPAIIVSGPAQRLLTLRPARSRSRHATLSIESSDSFVASTAASIATGWSEPVPGRELHPLKSSAFHGALFRQLTNHRFELRINHLRLVSTLLHFYPIVP
Ga0307477_100121681	3300031753	Hardwood Forest Soil	ITPAGSMELVRSSFSIVIGLPRVTVRSAPAITFSGPAQRSLTLRPARSRSRLATLYIESSDSLVASAADSIASGWSEPVPGREFHPLKSSAFHGALFRQSSTSSV
Ga0307473_100430601	3300031820	Hardwood Forest Soil	MKLVRSSISIVGGLPCEKVRSAPAIIVSGPAQRSLALWPARSRSRLATLSIESSDSFVASAAVSIATGWSEPVPGRESHPLKSNAFHGALFRQLKELSVSVYR
Ga0307478_111030582	3300031823	Hardwood Forest Soil	MLHAIAITPAGPMQLVRSPLSIVNGLPCVTVRSAPAIVVSGPTQRSLTLWPASSPNRVATLYIESSDSFVASAAVSIATGWSEPAPGWELHPLKPSAFHGALLRQL
Ga0306919_100756431	3300031879	Soil	MKLVRSSFSIVSGLPCEKVRSAPAIIVSGPAQRLLTLRPARSRSRHATLSIESSDSFVASTAASIATGWSEPVPGRELHPLKSSAFHGALFRQLTNHRFELRINHLRLVSTLLQ
Ga0306921_104566821	3300031912	Soil	LPCEKVRSAPAIIVSGPAKRLLTLRPARSRSRHATLSIESSDSFVASTAASIATGWSEPVPGRELHPLKSSAFHGALFRQLKGGKRYLSGVVDIP
Ga0310913_107870412	3300031945	Soil	MELVRSSLSIVSGLPCEKVRSAPAIVVSGPAQRSFPLWPARSRSRLATLSIESSDSFVPSTAVSIATGWSEPVPGRELHPLKSSAFHGALITTTNFDSEISGPCAPGW
Ga0310910_114615951	3300031946	Soil	LPCVTVRSAFPAIIFSGPAQRSLTLWPARSPSRLATLYTESSDGFVASAAASIATGWSEPVPGREFHPLESSAFHGSLLRQRSAETVINLPAFIDLPISGK
Ga0318575_103801481	3300032055	Soil	MELVRSSLSIVSGLPCEKVRSAPAIIVSGPAQRLLTLRPARSRSRHATLSIESSDSFVASTAASIATGWSEPVPGRELHPLKSSAFHGALFRQLDVETRTAQYL
Ga0318540_100168381	3300032094	Soil	MKLVRSSFSIVSGLPCEKVRSAPAIIVSGPAQRLLTLRPARSRSRHATLSIESSDSFVASTAASIATGWSEPVPGRELHPLKSSAFHGALFRQLKGGKRYLSGVVDIP
Ga0307470_109369321	3300032174	Hardwood Forest Soil	MELVRSSLSIVGGLPREKVGSAPATVFSGPAQRSLTLWPARSRSRQATLSIESSDSFVASAAASIASGWSEPVPGREL
Ga0307472_1003336272	3300032205	Hardwood Forest Soil	MELVRSFVSIVSRLPCEKVRSAPAIMVSGPAQRSLTLWPARSPSRQATLYIESFGSFVASVAVSIATGWSEPVPGRESHPLKSSAFHGALFHQIKG
Ga0310896_107450611	3300032211	Soil	MELVRSSISIDSGLPCEKVRSAPAIIVSGPAQRSLALWPARSRSRLATLSIESSGSFVASTAVSIATGWSEPVPGRELHPLKSSAFHGALLRQQPHSFRLADDTDRADVLGSI
Ga0335080_102349651	3300032828	Soil	MELVRSSLSIVSGLPCEKVRSAPAIIVSGPAQRSLVLWPACSPSRHATLYTEGSDSFVASAAASIATGWNEPVPGRELHPLKSSAFHGAL
Ga0310914_110775652	3300033289	Soil	MKLIRSSIFIVSGLPCDKVRSAPAIVVSGPAQRSLTLWPARSRSRRATLSIESSDSFVASAVVSIATGWSEPVPGRELHPLKSNAFHGALYRQLS
Ga0310810_110446402	3300033412	Soil	MELVRSSVSIVSGLPCEKVRSAPAIIVSGPAQRSLVLWPACSPSRHATLYTEGSDSFVASAAASIATGWNEPVPGRELHPLKSSAFHGALFH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092818

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences