Metagenome / Metatranscriptome Family F092752

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092752
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	47 residues
Representative Sequence	MSLDSYYAMTAAKRNGTTTEHEMEKLGYVKDYYIGSGAWHWKKKVSK
Number of Associated Samples	89
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	42.06 %
% of genes near scaffold ends (potentially truncated)	15.89 %
% of genes from short scaffolds (< 2000 bps)	72.90 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.682 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (29.907 % of family members)
Environment Ontology (ENVO)	Unclassified (70.093 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.196 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.33% β-sheet: 18.67% Coil/Unstructured: 56.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF01258	zf-dskA_traR	10.28
PF01844	HNH	4.67
PF10688	Imp-YgjV	3.74
PF00140	Sigma70_r1_2	3.74
PF04542	Sigma70_r2	2.80
PF03851	UvdE	2.80
PF08443	RimK	1.87
PF04545	Sigma70_r4	1.87
PF14743	DNA_ligase_OB_2	1.87
PF00877	NLPC_P60	1.87
PF01467	CTP_transf_like	1.87
PF00156	Pribosyltran	1.87
PF02585	PIG-L	0.93
PF07728	AAA_5	0.93
PF00583	Acetyltransf_1	0.93
PF00534	Glycos_transf_1	0.93
PF00959	Phage_lysozyme	0.93
PF13385	Laminin_G_3	0.93
PF07068	Gp23	0.93
PF00154	RecA	0.93
PF01068	DNA_ligase_A_M	0.93
PF02894	GFO_IDH_MocA_C	0.93
PF03061	4HBT	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	10.28
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	6.54
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.80
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.80
COG4294	UV DNA damage repair endonuclease	Replication, recombination and repair [L]	2.80
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.80
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	1.87
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.93
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.93
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.93
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.93
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
All Organisms	root	All Organisms	38.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
Viruses	superkingdom	All Organisms → Viruses	25.23 %
cellular organisms	root	All Organisms → cellular organisms	13.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	13.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.15 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	11.21 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	13.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.15 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	6.54 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	13.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.15 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	6.54 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	13.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.15 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	6.54 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	12.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.15 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	4.67 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1.87 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.15 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	4.67 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1.87 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.15 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	1.87 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1.87 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.93 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.15 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1.87 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1.87 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	0.93 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.15 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1.87 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1.87 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.93 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001460\|JGI24003J15210_10095652	Not Available	862	Open in IMG/M
3300001472\|JGI24004J15324_10054539	Not Available	1175	Open in IMG/M
3300001589\|JGI24005J15628_10042628	Not Available	1815	Open in IMG/M
3300001829\|ACM55_1061709	Not Available	664	Open in IMG/M
3300001941\|GOS2219_1027128	Not Available	913	Open in IMG/M
3300002482\|JGI25127J35165_1018255	Not Available	1718	Open in IMG/M
3300002482\|JGI25127J35165_1019381	All Organisms → cellular organisms → Bacteria	1655	Open in IMG/M
3300002514\|JGI25133J35611_10024286	All Organisms → Viruses → Predicted Viral	2347	Open in IMG/M
3300004461\|Ga0066223_1345754	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1292	Open in IMG/M
3300005074\|Ga0070431_1281805	Not Available	507	Open in IMG/M
3300005239\|Ga0073579_1068019	Not Available	1303	Open in IMG/M
3300006026\|Ga0075478_10175185	Not Available	662	Open in IMG/M
3300006164\|Ga0075441_10000933	Not Available	14497	Open in IMG/M
3300006345\|Ga0099693_1538412	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	830	Open in IMG/M
3300006484\|Ga0070744_10116536	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	771	Open in IMG/M
3300006735\|Ga0098038_1032912	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1928	Open in IMG/M
3300006735\|Ga0098038_1058587	All Organisms → Viruses → Predicted Viral	1379	Open in IMG/M
3300006735\|Ga0098038_1058700	All Organisms → Viruses → Predicted Viral	1378	Open in IMG/M
3300006749\|Ga0098042_1018951	All Organisms → Viruses → Predicted Viral	2040	Open in IMG/M
3300006752\|Ga0098048_1004479	Not Available	5483	Open in IMG/M
3300006921\|Ga0098060_1137348	Not Available	681	Open in IMG/M
3300006927\|Ga0098034_1034434	All Organisms → Viruses → Predicted Viral	1521	Open in IMG/M
3300007539\|Ga0099849_1158114	Not Available	873	Open in IMG/M
3300007539\|Ga0099849_1363429	Not Available	513	Open in IMG/M
3300008993\|Ga0104258_1096381	Not Available	553	Open in IMG/M
3300009003\|Ga0102813_1240537	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300009079\|Ga0102814_10117657	All Organisms → Viruses → Predicted Viral	1456	Open in IMG/M
3300009432\|Ga0115005_10265361	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1347	Open in IMG/M
3300009495\|Ga0115571_1003528	Not Available	9854	Open in IMG/M
3300009507\|Ga0115572_10000190	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	52911	Open in IMG/M
3300009507\|Ga0115572_10067720	Not Available	2206	Open in IMG/M
3300009550\|Ga0115013_10153416	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1351	Open in IMG/M
3300010148\|Ga0098043_1063804	Not Available	1109	Open in IMG/M
3300010155\|Ga0098047_10037362	All Organisms → Viruses → Predicted Viral	1932	Open in IMG/M
3300010883\|Ga0133547_11275499	Not Available	1397	Open in IMG/M
3300012919\|Ga0160422_10301159	Not Available	986	Open in IMG/M
3300012920\|Ga0160423_10063062	Not Available	2664	Open in IMG/M
3300012920\|Ga0160423_10422695	Not Available	910	Open in IMG/M
3300012920\|Ga0160423_10487688	Not Available	838	Open in IMG/M
3300012928\|Ga0163110_10799199	Not Available	741	Open in IMG/M
3300012954\|Ga0163111_10073298	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2736	Open in IMG/M
3300017708\|Ga0181369_1036437	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1140	Open in IMG/M
3300017708\|Ga0181369_1072645	Not Available	742	Open in IMG/M
3300017710\|Ga0181403_1009826	All Organisms → Viruses → Predicted Viral	2065	Open in IMG/M
3300017721\|Ga0181373_1002575	Not Available	3541	Open in IMG/M
3300017721\|Ga0181373_1014432	Not Available	1478	Open in IMG/M
3300017732\|Ga0181415_1010111	Not Available	2251	Open in IMG/M
3300017749\|Ga0181392_1134072	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	729	Open in IMG/M
3300017749\|Ga0181392_1140690	Not Available	709	Open in IMG/M
3300017753\|Ga0181407_1112112	Not Available	683	Open in IMG/M
3300017755\|Ga0181411_1006845	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3872	Open in IMG/M
3300017759\|Ga0181414_1090504	Not Available	807	Open in IMG/M
3300017764\|Ga0181385_1008294	All Organisms → Viruses → Predicted Viral	3388	Open in IMG/M
3300017818\|Ga0181565_10793086	Not Available	596	Open in IMG/M
3300018049\|Ga0181572_10844932	Not Available	544	Open in IMG/M
3300018416\|Ga0181553_10098055	All Organisms → Viruses → Predicted Viral	1816	Open in IMG/M
3300018421\|Ga0181592_10497845	Not Available	843	Open in IMG/M
3300018426\|Ga0181566_10843948	Not Available	623	Open in IMG/M
3300018428\|Ga0181568_11092629	Not Available	603	Open in IMG/M
3300020055\|Ga0181575_10633452	Not Available	554	Open in IMG/M
3300020185\|Ga0206131_10315384	Not Available	692	Open in IMG/M
3300020267\|Ga0211648_1039681	Not Available	949	Open in IMG/M
3300020282\|Ga0211667_1043922	Not Available	1131	Open in IMG/M
3300020340\|Ga0211594_1020486	All Organisms → Viruses → Predicted Viral	1448	Open in IMG/M
3300020393\|Ga0211618_10244718	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	606	Open in IMG/M
3300020394\|Ga0211497_10031065	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	2502	Open in IMG/M
3300020397\|Ga0211583_10197999	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	733	Open in IMG/M
3300020404\|Ga0211659_10011764	All Organisms → Viruses → Predicted Viral	4379	Open in IMG/M
3300020406\|Ga0211668_10058074	Not Available	1705	Open in IMG/M
3300020436\|Ga0211708_10224704	Not Available	757	Open in IMG/M
3300020442\|Ga0211559_10050766	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2041	Open in IMG/M
3300020448\|Ga0211638_10218473	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	876	Open in IMG/M
3300020463\|Ga0211676_10015318	Not Available	6330	Open in IMG/M
3300020463\|Ga0211676_10267016	Not Available	993	Open in IMG/M
3300020469\|Ga0211577_10450124	Not Available	788	Open in IMG/M
3300021335\|Ga0213867_1179443	Not Available	713	Open in IMG/M
3300021375\|Ga0213869_10346646	Not Available	621	Open in IMG/M
3300022074\|Ga0224906_1218980	Not Available	514	Open in IMG/M
3300023116\|Ga0255751_10283756	Not Available	873	Open in IMG/M
3300024223\|Ga0228601_1000319	All Organisms → cellular organisms → Bacteria	5298	Open in IMG/M
3300024236\|Ga0228655_1000010	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	145041	Open in IMG/M
3300024281\|Ga0228610_1012649	Not Available	922	Open in IMG/M
3300024346\|Ga0244775_10002999	All Organisms → cellular organisms → Bacteria	18138	Open in IMG/M
3300024346\|Ga0244775_11397158	Not Available	539	Open in IMG/M
3300025070\|Ga0208667_1058517	Not Available	606	Open in IMG/M
3300025071\|Ga0207896_1027944	Not Available	963	Open in IMG/M
3300025086\|Ga0208157_1002920	Not Available	6892	Open in IMG/M
3300025101\|Ga0208159_1029017	Not Available	1269	Open in IMG/M
3300025101\|Ga0208159_1042997	Not Available	968	Open in IMG/M
3300025120\|Ga0209535_1151196	Not Available	731	Open in IMG/M
3300025122\|Ga0209434_1101334	Not Available	823	Open in IMG/M
3300025127\|Ga0209348_1009434	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3966	Open in IMG/M
3300025127\|Ga0209348_1132141	Not Available	747	Open in IMG/M
3300025128\|Ga0208919_1122417	Not Available	824	Open in IMG/M
3300025276\|Ga0208814_1146212	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	536	Open in IMG/M
3300025626\|Ga0209716_1002254	Not Available	12896	Open in IMG/M
3300025849\|Ga0209603_1055934	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2025	Open in IMG/M
3300026505\|Ga0228647_1143114	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	548	Open in IMG/M
3300027280\|Ga0208972_1091766	Not Available	536	Open in IMG/M
3300029319\|Ga0183748_1000615	All Organisms → cellular organisms → Bacteria	24183	Open in IMG/M
3300029319\|Ga0183748_1061721	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1005	Open in IMG/M
3300029319\|Ga0183748_1116071	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	587	Open in IMG/M
3300029319\|Ga0183748_1118045	Not Available	579	Open in IMG/M
3300029448\|Ga0183755_1021803	All Organisms → Viruses → Predicted Viral	2095	Open in IMG/M
3300029787\|Ga0183757_1000148	Not Available	41554	Open in IMG/M
3300031519\|Ga0307488_10000113	Not Available	55916	Open in IMG/M
3300031519\|Ga0307488_10426818	Not Available	812	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.07%
Porifera	Host-Associated → Porifera	0.93%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.07%
Unclassified	Host-Associated → Porifera → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	40.19%
Unclassified	Environmental → Aquatic → Marine → Unclassified	22.43%
Coastal	Environmental → Aquatic → Marine → Coastal	11.21%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	11.21%
Strait	Environmental → Aquatic → Marine → Strait	8.41%
Pelagic	Environmental → Aquatic → Marine → Pelagic	5.61%
Unclassified	Host-Associated → Porifera → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	33.64%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	22.43%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	11.21%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	8.41%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	7.48%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	6.54%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	5.61%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.87%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.87%
Unclassified	Host-Associated → Porifera → Unclassified → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	29.91%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	19.63%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	8.41%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	7.48%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	5.61%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	4.67%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	4.67%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.80%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.80%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.87%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.87%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.87%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.93%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.93%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.93%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.93%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.93%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.93%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.93%
Marine Benthic Sponge Stylissa Massa Associated	Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Marine Benthic Sponge Stylissa Massa Associated	0.93%
Ocean Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental	Open in IMG/M
3300001829	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM55, ROCA_DNA132_0.2um_27g	Environmental	Open in IMG/M
3300001941	Marine microbial communities from Browns Bank, Gulf of Maine - GS003	Environmental	Open in IMG/M
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300005074	Marine benthic sponge Stylissa massa associated microbial communities from Guam, USA	Host-Associated	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006345	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0075m	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300008993	Marine microbial communities from eastern North Pacific Ocean - P1 free-living	Environmental	Open in IMG/M
3300009003	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017721	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaG	Environmental	Open in IMG/M
3300017732	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020055	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020267	Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556026-ERR599108)	Environmental	Open in IMG/M
3300020282	Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX556074-ERR599169)	Environmental	Open in IMG/M
3300020340	Marine microbial communities from Tara Oceans - TARA_B100001121 (ERX555960-ERR599119)	Environmental	Open in IMG/M
3300020393	Marine microbial communities from Tara Oceans - TARA_B100000161 (ERX556105-ERR599054)	Environmental	Open in IMG/M
3300020394	Marine microbial communities from Tara Oceans - TARA_B000000557 (ERX556068-ERR599026)	Environmental	Open in IMG/M
3300020397	Marine microbial communities from Tara Oceans - TARA_B100000123 (ERX556052-ERR599075)	Environmental	Open in IMG/M
3300020404	Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)	Environmental	Open in IMG/M
3300020406	Marine microbial communities from Tara Oceans - TARA_B100000886 (ERX555926-ERR599024)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020448	Marine microbial communities from Tara Oceans - TARA_B100000941 (ERX555919-ERR598954)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300021335	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540	Environmental	Open in IMG/M
3300021375	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300024223	Seawater microbial communities from Monterey Bay, California, United States - 1D	Environmental	Open in IMG/M
3300024236	Seawater microbial communities from Monterey Bay, California, United States - 67D	Environmental	Open in IMG/M
3300024281	Seawater microbial communities from Monterey Bay, California, United States - 11D	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025070	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025071	Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025276	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)	Environmental	Open in IMG/M
3300025626	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)	Environmental	Open in IMG/M
3300025849	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)	Environmental	Open in IMG/M
3300026505	Seawater microbial communities from Monterey Bay, California, United States - 59D	Environmental	Open in IMG/M
3300027280	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_48_BLW_10 (SPAdes)	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24003J15210_100956521	3300001460	Marine	MSYNSYYAMTAAKRNGTTIESEMEKMGYIKDYYIGSGAWHWKKV*
JGI24004J15324_100545391	3300001472	Marine	YAMTAAKRNGTTIESEMEKMGYIKDYYIGSGAWHWKKV*
JGI24005J15628_100426283	3300001589	Marine	MSLDSYYAMTAAKRNHTSIESEMEKKGYVKDYYIGAGAWQWKKVLKTVG*
ACM55_10617092	3300001829	Marine Plankton	MEYTSYYAMTAARKNGTTLEEEMNKRGYVKDYYIGSGAWHWKKSLNFSGKKVDTH*
GOS2219_10271283	3300001941	Marine	MNYNSYYAMTASKRNGTTVEYEMEARGYTKDYYIGSGAWHWKKSVKKC*
JGI25127J35165_10182551	3300002482	Marine	MDYTSYYAMTAAKRNSSSLEEEMNKRGYIKDYYIGAGAWHWKKV*
JGI25127J35165_10193813	3300002482	Marine	MKYDSYYALTASKRNGTTIEHEMTKRGYVKEYYIGSGAFHWKKVGSLT*
JGI25133J35611_100242863	3300002514	Marine	MYDSYYAMTSSKRNGTTIEEEMKKRGYVKDYYIGSGAYHWKKVQRVR*
Ga0066223_13457542	3300004461	Marine	MSLDSYYAMTAAKRNGTNVNDEMEKSGYIKEYYIGSGAWHWKKSNNEEKG*
Ga0070431_12818052	3300005074	Marine Benthic Sponge Stylissa Massa Associated	MEYTAYYAMTAAKRNGTTLEEEMKKRGYVKERYIGFGAWHWKKVKN
Ga0073579_10680191	3300005239	Marine	NSYYAMTASKRNGTTVEYEMEARGYTKDYYIGSGAWHWKKSVKKC*
Ga0075478_101751853	3300006026	Aqueous	MKYDSYYALTASKRNGTTIEHEMTKRGYVKEYYIGAGAFHWKKVGSLT*
Ga0075441_100009334	3300006164	Marine	MSLDSYYAMTAAKRNNTSVESQMKKRGYVKDYYIGAGAWQWKKVLKRLDI*
Ga0099693_15384121	3300006345	Marine	MEYTSYYAMTAAKKNGTTLEEEMNKRGYVKDYYIGSGAWHWKKSLNFSGKKVDTH*
Ga0070744_101165363	3300006484	Estuarine	MSLDSYYAMTAAKRNGTNADDEMEKLGYIKEYYIGSGAWHWKKSNNEEKR*
Ga0098038_10329123	3300006735	Marine	MKYDSYYALTASKRNGTTIEHEMTKLGYVKEYYIGSGAFHWKKVGSLT*
Ga0098038_10585871	3300006735	Marine	MKYDSYYALTASKRNGTTMEHEMTKLGYVKEYYVGSGAFHWKKVGSVT*
Ga0098038_10587003	3300006735	Marine	MSLDSYYAMTAAKRNGTTTEHEMEKLGYVKDYYIGSGAWHWKKKVSK*
Ga0098042_10189514	3300006749	Marine	MKYDSYYALTASKRNGTTIEHEMTKLGYVKEYYVGSGAFHWKKVGSVT*
Ga0098048_100447913	3300006752	Marine	MSLDSYYAMTAARRNNTTIESEMEKKGYVKDYYIGAGAWQWKKVLKTVG*
Ga0098060_11373482	3300006921	Marine	MTAAKRNGTTTEHEMEKLGYVKDYYIGSGAWHWKKKVSK*
Ga0098034_10344343	3300006927	Marine	MYDSYYAMTSSKRNGTTIEEEMKKRGYVKDYYIGSGAY
Ga0099849_11581142	3300007539	Aqueous	MSLDSYYAMTAARRNNTSIESEMEKKGYVKDYYIGAGAWQWKKVLKTVG*
Ga0099849_13634292	3300007539	Aqueous	MNLDSYYAMTAAKRNGTTTEYEMEKRGYVKDYYIGAGAWHWKKKVSK*
Ga0104258_10963812	3300008993	Ocean Water	MTASKRNGTPIEYEMEAMGYVKDYYIGSGVWHWKKS*
Ga0102813_12405371	3300009003	Estuarine	MTASKRNGTPIEYEMEAMGYVKDYYIGSGAWHWKKVKKSVKKFSRVK
Ga0102814_101176573	3300009079	Estuarine	MSLDSYYAMTAARRNNTTVESEMEKKGYVKDYYIGAGAWQWKKVLKTVG*
Ga0115005_102653612	3300009432	Marine	MKLDSYYAMTASKRNGTTIEVEMERRGYQKEWYIGSGAWHWIKSGDGR*
Ga0115571_100352824	3300009495	Pelagic Marine	MSLDSYYAMTAARRNNTSMESEMEKKGYVKDYYIGAGAWQWKKVLKTVG*
Ga0115572_1000019052	3300009507	Pelagic Marine	MTASKRNGTPIEYEMEAMGYVKDYYIGSGAWHWKKSEKKC*
Ga0115572_100677204	3300009507	Pelagic Marine	MKYDSYYALTASKRNGTTIEHEMTKRGYVKEYYIGSGAFH*
Ga0115013_101534161	3300009550	Marine	MDYTSYYAMTAAKRNGSSLEEEMNKRGYVKDYYIGAGAWHWKKV*
Ga0098043_10638044	3300010148	Marine	MKYDSYYALTASKRNGTTIEHEMTKRGYVKEYYIGSGAFHWKKVG*
Ga0098047_100373622	3300010155	Marine	MTSSKRNGTTIEEEMKKRGYVKDYYIGSGAYHWKKVQRVR*
Ga0133547_112754993	3300010883	Marine	MSYNSYYAMTAAKRNGTTVEFEMEALGYIKDYYIGSGAWHWKKV*
Ga0160422_103011591	3300012919	Seawater	MNLDSYYAMIDSKKNGTTSEHEMEKRGYVKDYYIGAGAWHWKKKESKK*
Ga0160423_100630628	3300012920	Surface Seawater	MKYDSYYAMTAAKRNGTTVEYEMESRGYVKDYYIRSGAWHWKKVDK*
Ga0160423_104226951	3300012920	Surface Seawater	MYDSYYAMTSSKRNGTTIEEEMKKRGYVKDYYIGSGAYHWKKENQKG*
Ga0160423_104876883	3300012920	Surface Seawater	MDYTSYYAMTAAKRNGTSLEEEMNKRGYVKDYYIGSGAWHWKKV*
Ga0163110_107991992	3300012928	Surface Seawater	MEYTSYYAMTAAKKNGTTLEEEMNKRGYVKDYYIGSGAWHWKKV*
Ga0163111_100732987	3300012954	Surface Seawater	MKYDSYYALTASKRNGTTIEHEMTKRGYVKEYYIGSGAFYWKKVG*
Ga0181369_10364373	3300017708	Marine	MKYDSYYALTASKRNGTTMEHEMTKLGYVKEYYIGSGAFHWKKVGSLT
Ga0181369_10726452	3300017708	Marine	MTASKRNGTSIEYEMEARGYVKDYYIGQGTWHWKKVKNNC
Ga0181403_10098262	3300017710	Seawater	MSLDSYYAMTAARRNNTTVESEMEKRGYVKDYYIGAGAWQWKKVLKTVG
Ga0181373_10025752	3300017721	Marine	MKYDSYYALTASKRNGTTIEHEMTKLGYVKEYYIGSGAFHWKKVGSVT
Ga0181373_10144321	3300017721	Marine	MKYDSYYALTASKRNGTTIEHEMTKRGYVKEYYIGS
Ga0181415_10101118	3300017732	Seawater	MDSYYAMTAAKKNGTTLEEEMNKRGYVKDYYIGSGAWHRKKV
Ga0181392_11340722	3300017749	Seawater	VDLDSYYAMTASKRNGTSIEYEMEAREYVKDYYIGQGAWHWKKVKNNC
Ga0181392_11406902	3300017749	Seawater	MTASKRNGTTIEYEMEAIGYVKDYYIGSGAWHWKKSVKKC
Ga0181407_11121124	3300017753	Seawater	MKYDSYYALTASKRNGTTIEHEMTKRGYVKEYYIGSGAFHWKK
Ga0181411_10068451	3300017755	Seawater	VDLNSYYAMTASKRNGTTIEYEMEAIGYVKDYYIGSGAWHWKKSVKKC
Ga0181414_10905043	3300017759	Seawater	MDSYYAMTAAKKNGTTLEEEMTKRGYVKDYYIGSGAWHWKKSLNFSGKKVDTH
Ga0181385_10082949	3300017764	Seawater	MDSYYAMTAAKKNGTTLEEEMNKRGYVKDYYIGSGAWHWKKSLNFSGKKVDTH
Ga0181565_107930862	3300017818	Salt Marsh	MNLDSYYAMTSAKKNGTTTEHEMEKLGYIKDYYIGSGAWHWKKKVSKKQ
Ga0181572_108449322	3300018049	Salt Marsh	MEYTAYYAMTAAKKNGTTLEEEMNKRGYVKDYYIGSGAWHWKKSLNFSGKKVDTH
Ga0181553_100980551	3300018416	Salt Marsh	ILNGRCRQMNLDSYYAMTSAKKNGTTTEHEMEKLGYIKDYYIGSGAWHWKKKVSKKQ
Ga0181592_104978453	3300018421	Salt Marsh	DSYYAMTSAKKNGTTTEHEMEKLGYIKDYYIGSGAWHWKKKVSKKQ
Ga0181566_108439483	3300018426	Salt Marsh	MEYTAYYAMTAAKRNGTTLEEEMKKRGYVKERYIGFGA
Ga0181568_110926291	3300018428	Salt Marsh	MEYTVYYAMTAAKRNGTTLEEEMKKRGYVKEHYIGFGAWHWKKVKNFW
Ga0181575_106334521	3300020055	Salt Marsh	MEYTAYYAMTAAKKNGTTLEEEMNKRGYVKDYYIGSGAWHWKKSLNF
Ga0206131_103153841	3300020185	Seawater	MSLDSYYAMTASKRNGTNVDDEMKKSGYIKEYYIGSGAWHWKKSNNEKKR
Ga0211648_10396813	3300020267	Marine	MEYTSYYAMTAAKRNGSSLEEEMNKRGYVKDYYIGSGAWHWKKSLNFSGKKVDTH
Ga0211667_10439222	3300020282	Marine	MYDSYYAMTSSKRNGTTIEEEMKKRGYVKDYYIGSGAYHWKRENQKG
Ga0211594_10204862	3300020340	Marine	MINMYDSYYAMTSSKRNGTTIEEEMKKRGYVKDYYIGSGAYHWKKENQKG
Ga0211618_102447183	3300020393	Marine	YYAMTAARKNGTTLEEEMNKRGYVKDYYIGSGAWHWKKSLNFSGKKVDTH
Ga0211497_100310655	3300020394	Marine	MSESYYAMTAAKRNGTTLEHEMEKRGFIKDYYIGSGAWHWKKEKK
Ga0211583_101979991	3300020397	Marine	MEYTSYYAMTAAKKNGTTLEEEMNKRGYVKDYYIGSGAWHWKKSLNFSGKKVDTH
Ga0211659_100117645	3300020404	Marine	MYDSYYAMTSSKRNGTTIEEEMKKRGYVKDYYIGSGAYHWKKENQKG
Ga0211668_100580742	3300020406	Marine	MSDSYYAMTASKRNGTTIEYEMKKRGYVKDYYIGSGAYHWKKETSTK
Ga0211708_102247042	3300020436	Marine	MEHTSYYAMTAAKKNGTTLEEEMNKRGYVKDYYIGSGAWHWKKSLNFSGKKVDTH
Ga0211559_100507663	3300020442	Marine	MDYTSYYAMTAAKRNGTSLEEEMNKRGYVKDYYIGSGAWHWKKSLNFSGKKVDTH
Ga0211638_102184733	3300020448	Marine	MKHISYYAMTAAKKNGTTLEEEMNKRGYVKDYYIGSGAWHWKKSLNFSGKKVDTH
Ga0211676_100153182	3300020463	Marine	MSLDSYYAMTSAKKNGTTTEHEMEKLGYIKDYYIGSGAWHWKKKVSKK
Ga0211676_102670163	3300020463	Marine	MDYTSYYAMTAAKRNGSSLEEEMNKRGYVKDYYIGSGAWHWKKSLNKVGK
Ga0211577_104501243	3300020469	Marine	MSLDSYYAMTAARRNNTTVESEMEKKGYVKDYYIGAGAWQWKKVLKTVG
Ga0213867_11794432	3300021335	Seawater	MKYDSYYALTASKRNGTTIEHEMTKRGYVKEYYIGAGAFHWKKVGSLT
Ga0213869_103466462	3300021375	Seawater	MSLDSYYAMTAARRNNTSIESEMEKKGYVKDYYIGAGAWQWKKVLKTVG
Ga0224906_12189803	3300022074	Seawater	MKYDSYYALTASKRNGTTIEHEMTKRGYVKEYYIGSGAFHWKKVG
Ga0255751_102837561	3300023116	Salt Marsh	TSAKKNGTTTEHEMEKLGYIKDYYIGSGAWHWKKKVSKKQ
Ga0228601_100031911	3300024223	Seawater	VDLNSYYAMTASKRNGTPIEYEMEAMGYVKDYYIGSGAWHWKKSEKKC
Ga0228655_100001049	3300024236	Seawater	LNSYYAMTASKRNGTPIEYEMEAMGYVKDYYIGSGAWHWKKSEKKC
Ga0228610_10126492	3300024281	Seawater	MTASKRNGTPIEYEMEAMGYVKDYYIGSGAWHWKKSEKKC
Ga0244775_1000299914	3300024346	Estuarine	MSLDSYYAMTAAKRNGTNADDEMEKLGYIKEYYIGSGAWHWKKSNNEEKR
Ga0244775_113971582	3300024346	Estuarine	MSLDSYYAMTAARRNNTTVESAMEKKGYVKDYYIGAGAWQWKKVLKTVG
Ga0208667_10585171	3300025070	Marine	MSLDSYYAMTAARRNNTTIESEMEKKGYVKDYYIGAGAWQWKKVLKTVG
Ga0207896_10279443	3300025071	Marine	MSYNSYYAMTAAKRNGTTIESEMEKMGYIKDYYIGSGAWHWKKV
Ga0208157_10029208	3300025086	Marine	MSLDSYYAMTAAKRNGTTTEHEMEKLGYVKDYYIGSGAWHWKKKVSK
Ga0208159_10290172	3300025101	Marine	MKYDSYYALTASKRNGTTIEHEMTKLGYVKEYYVGSGAFHWKKVGSVT
Ga0208159_10429974	3300025101	Marine	MKYDSYYALTASKRNGTTIEHEMTKLGYVKEYYIGSGAFHWKKVGSLT
Ga0209535_11511962	3300025120	Marine	MSLDSYYAMTAAKRNHTSIESEMEKKGYVKDYYIGAGAWQWKKVLKTVG
Ga0209434_11013342	3300025122	Marine	MYDSYYAMTSSKRNGTTIEEEMKKRGYVKDYYIGSGAYHWKKVQRVR
Ga0209348_100943410	3300025127	Marine	MDYTSYYAMTAAKRNSSSLEEEMNKRGYIKDYYIGAGAWHWKKV
Ga0209348_11321413	3300025127	Marine	MKYDSYYALTASKRNGTTIEHEMTKRGYVKEYYIGSGAFHWKKVGSLT
Ga0208919_11224171	3300025128	Marine	MKYDSYYALTASKRNGTTMEHEMTKLGYVKEYYVGSGAFHWKKVGSVT
Ga0208814_11462123	3300025276	Deep Ocean	MSLDSYYAMTAAKRNNTSVESQMKKRGYVKDYYIGAGAWQWKKVLKRLDI
Ga0209716_100225423	3300025626	Pelagic Marine	MSLDSYYAMTAARRNNTSMESEMEKKGYVKDYYIGAGAWQWKKVLKTVG
Ga0209603_10559344	3300025849	Pelagic Marine	MKYDSYYALTASKRNGTTIEHEMTKRGYVKEYYIGSGAFH
Ga0228647_11431141	3300026505	Seawater	MSLDSYYAMTAARRNNTTVESEMEKKGYVKDYYIGAGA
Ga0208972_10917661	3300027280	Marine	MFRKIKNNMSLDSYYAMTAAKRNGTNADDEMEKLGYIKEYYIGSGA
Ga0183748_10006152	3300029319	Marine	MNLDSYYAMIDSKKNGTTSEHEMEKRGYVKDYYIGAGAWHWKKKESKK
Ga0183748_10617213	3300029319	Marine	MEYTAYYAMTAAKRNGTTLEEEMKKRGYVKERYIGFGAWHWKKVKNFW
Ga0183748_11160711	3300029319	Marine	MNLDSYYAMTAAKRNGTTTEYEMEKLGYVKDYYIGAGAWHWKKKVSK
Ga0183748_11180452	3300029319	Marine	MEHTSYYAMTAAKRNGTTLEEEMNKRGYVKDYYIGSGAWHWKKV
Ga0183755_10218032	3300029448	Marine	MSLDSYYAMTSAKKNGTTTEHEMEKLGYTKDYYIGSGAWHWKKKVSKK
Ga0183757_100014844	3300029787	Marine	MDSYYAMTAAKRNGTTLEEEMNKRGYVKDYYIGSGAWHWKKSLNFSGKKVDTH
Ga0307488_1000011375	3300031519	Sackhole Brine	MSYNSYYAMTAAKRNGTTVEFEMEALGYIKDYYIGSGAWHWKKV
Ga0307488_104268181	3300031519	Sackhole Brine	MKLDSYYAMTSSKRNGTTIDVEMEKRGYQKEYYIGSGAYHWIKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092752

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences