Metagenome / Metatranscriptome Family F092675

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092675
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	90 residues
Representative Sequence	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERMVDQEGGRSKRVDTRP
Number of Associated Samples	90
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.64 %
% of genes near scaffold ends (potentially truncated)	44.86 %
% of genes from short scaffolds (< 2000 bps)	86.92 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.832 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (13.084 % of family members)
Environment Ontology (ENVO)	Unclassified (41.121 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (65.421 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.74% β-sheet: 0.00% Coil/Unstructured: 28.26%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00441	Acyl-CoA_dh_1	19.63
PF13641	Glyco_tranf_2_3	13.08
PF00535	Glycos_transf_2	6.54
PF05195	AMP_N	6.54
PF11959	DUF3473	4.67
PF01522	Polysacc_deac_1	3.74
PF02770	Acyl-CoA_dh_M	1.87
PF02771	Acyl-CoA_dh_N	0.93
PF00002	7tm_2	0.93
PF00930	DPPIV_N	0.93
PF14667	Polysacc_synt_C	0.93
PF02219	MTHFR	0.93
PF13936	HTH_38	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	22.43
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	6.54
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	3.74
COG0685	5,10-methylenetetrahydrofolate reductase	Amino acid transport and metabolism [E]	0.93
COG0823	Periplasmic component TolB of the Tol biopolymer transport system	Intracellular trafficking, secretion, and vesicular transport [U]	0.93
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.83 %
Unclassified	root	N/A	26.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.83 %
Unclassified	root	N/A	26.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.83 %
Unclassified	root	N/A	26.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	10.28 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	9.35 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.87 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	6.54 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.61 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3.74 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.80 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.87 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.93 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	6.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.61 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	2.80 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	2.80 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.87 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Spirulinales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Spirulinales	6.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.61 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	2.80 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	2.80 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1.87 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Spirulinaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Spirulinales → Spirulinaceae	6.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.61 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	2.80 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2.80 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	1.87 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Spirulina	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Spirulinales → Spirulinaceae → Spirulina	6.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.61 %
Alkalihalobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Alkalihalobacillus	2.80 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1.87 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.93 %
Calycomorphotria	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Calycomorphotria	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Spirulina subsalsa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Spirulinales → Spirulinaceae → Spirulina → Spirulina subsalsa	6.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.61 %
Alkalihalobacillus pseudalcaliphilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Alkalihalobacillus → Alkalihalobacillus pseudalcaliphilus	2.80 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1.87 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.93 %
Calycomorphotria hydatis	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Calycomorphotria → Calycomorphotria hydatis	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459019\|G14TP7Y02H5P5W	Not Available	613	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0899989	Not Available	1488	Open in IMG/M
3300000789\|JGI1027J11758_11800560	Not Available	507	Open in IMG/M
3300000956\|JGI10216J12902_107027232	Not Available	647	Open in IMG/M
3300001990\|JGI24737J22298_10111431	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300003324\|soilH2_10166278	All Organisms → cellular organisms → Bacteria	1684	Open in IMG/M
3300004016\|Ga0058689_10073978	Not Available	677	Open in IMG/M
3300004114\|Ga0062593_100458149	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300004156\|Ga0062589_100106444	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300004156\|Ga0062589_101783938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Spirulinales → Spirulinaceae → Spirulina → Spirulina subsalsa	617	Open in IMG/M
3300004157\|Ga0062590_100080009	All Organisms → cellular organisms → Bacteria	1975	Open in IMG/M
3300004479\|Ga0062595_100432966	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300004479\|Ga0062595_101304364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Spirulinales → Spirulinaceae → Spirulina → Spirulina subsalsa	654	Open in IMG/M
3300005290\|Ga0065712_10025870	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300005294\|Ga0065705_10256991	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300005295\|Ga0065707_10033103	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300005327\|Ga0070658_10097470	All Organisms → cellular organisms → Bacteria	2428	Open in IMG/M
3300005332\|Ga0066388_101128251	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300005332\|Ga0066388_103294362	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005333\|Ga0070677_10841454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Spirulinales → Spirulinaceae → Spirulina → Spirulina subsalsa	527	Open in IMG/M
3300005334\|Ga0068869_101149036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Spirulinales → Spirulinaceae → Spirulina → Spirulina subsalsa	681	Open in IMG/M
3300005336\|Ga0070680_101443816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Spirulinales → Spirulinaceae → Spirulina → Spirulina subsalsa	596	Open in IMG/M
3300005338\|Ga0068868_101670278	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005345\|Ga0070692_11179602	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300005355\|Ga0070671_100095964	All Organisms → cellular organisms → Bacteria	2486	Open in IMG/M
3300005355\|Ga0070671_100642561	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300005436\|Ga0070713_100859766	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300005439\|Ga0070711_100166248	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300005471\|Ga0070698_100318462	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300005518\|Ga0070699_101087171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Spirulinales → Spirulinaceae → Spirulina → Spirulina subsalsa	734	Open in IMG/M
3300005535\|Ga0070684_100378502	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300005548\|Ga0070665_100905628	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300005548\|Ga0070665_101150362	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300005618\|Ga0068864_100450935	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300005618\|Ga0068864_101287956	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300005718\|Ga0068866_11386532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Spirulinales → Spirulinaceae → Spirulina → Spirulina subsalsa	513	Open in IMG/M
3300005841\|Ga0068863_100071479	All Organisms → cellular organisms → Bacteria	3282	Open in IMG/M
3300005841\|Ga0068863_100142520	All Organisms → cellular organisms → Bacteria	2291	Open in IMG/M
3300005844\|Ga0068862_100522140	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300006049\|Ga0075417_10435913	Not Available	652	Open in IMG/M
3300006049\|Ga0075417_10528931	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300006169\|Ga0082029_1701377	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300006844\|Ga0075428_100399150	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300006845\|Ga0075421_100941189	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300006845\|Ga0075421_102815572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Alkalihalobacillus → Alkalihalobacillus pseudalcaliphilus	500	Open in IMG/M
3300006846\|Ga0075430_100907413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Alkalihalobacillus → Alkalihalobacillus pseudalcaliphilus	726	Open in IMG/M
3300006852\|Ga0075433_11607901	Not Available	560	Open in IMG/M
3300006876\|Ga0079217_10131637	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300007004\|Ga0079218_10281147	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300007004\|Ga0079218_14007851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Alkalihalobacillus → Alkalihalobacillus pseudalcaliphilus	500	Open in IMG/M
3300009094\|Ga0111539_11942660	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300009098\|Ga0105245_12422700	Not Available	578	Open in IMG/M
3300009100\|Ga0075418_10181529	All Organisms → cellular organisms → Bacteria	2240	Open in IMG/M
3300009100\|Ga0075418_12961090	Not Available	518	Open in IMG/M
3300009147\|Ga0114129_10014514	All Organisms → cellular organisms → Bacteria → Proteobacteria	11227	Open in IMG/M
3300009148\|Ga0105243_12100104	Not Available	601	Open in IMG/M
3300009162\|Ga0075423_11040135	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300009174\|Ga0105241_12128086	Not Available	555	Open in IMG/M
3300009176\|Ga0105242_11794709	All Organisms → cellular organisms → Bacteria → Acidobacteria	652	Open in IMG/M
3300009177\|Ga0105248_12024485	Not Available	654	Open in IMG/M
3300009551\|Ga0105238_10616408	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300009551\|Ga0105238_12738009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300010041\|Ga0126312_10080175	All Organisms → cellular organisms → Bacteria	2211	Open in IMG/M
3300010166\|Ga0126306_11785099	Not Available	515	Open in IMG/M
3300010358\|Ga0126370_11533166	Not Available	635	Open in IMG/M
3300010373\|Ga0134128_11262834	Not Available	814	Open in IMG/M
3300010403\|Ga0134123_11499580	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	718	Open in IMG/M
3300011333\|Ga0127502_10904683	Not Available	637	Open in IMG/M
3300012212\|Ga0150985_106484891	Not Available	615	Open in IMG/M
3300012212\|Ga0150985_120627098	Not Available	536	Open in IMG/M
3300012910\|Ga0157308_10125165	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	790	Open in IMG/M
3300012957\|Ga0164303_10461453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300012958\|Ga0164299_10363242	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300012985\|Ga0164308_11198556	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300013296\|Ga0157374_12739995	Not Available	521	Open in IMG/M
3300014325\|Ga0163163_10002882	All Organisms → cellular organisms → Bacteria	14543	Open in IMG/M
3300014745\|Ga0157377_11560115	Not Available	527	Open in IMG/M
3300015371\|Ga0132258_10034882	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	11307	Open in IMG/M
3300015371\|Ga0132258_10356405	All Organisms → cellular organisms → Bacteria	3619	Open in IMG/M
3300015371\|Ga0132258_13110014	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M
3300018073\|Ga0184624_10195497	Not Available	901	Open in IMG/M
3300018476\|Ga0190274_10221744	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1685	Open in IMG/M
3300018476\|Ga0190274_10556332	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300021445\|Ga0182009_10543573	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300022756\|Ga0222622_10182310	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300025321\|Ga0207656_10150970	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300025321\|Ga0207656_10197303	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	971	Open in IMG/M
3300025893\|Ga0207682_10380555	Not Available	666	Open in IMG/M
3300025903\|Ga0207680_10158733	All Organisms → cellular organisms → Bacteria → Acidobacteria	1514	Open in IMG/M
3300025916\|Ga0207663_10138358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1693	Open in IMG/M
3300025925\|Ga0207650_10135366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1932	Open in IMG/M
3300025931\|Ga0207644_10444319	Not Available	1065	Open in IMG/M
3300025936\|Ga0207670_10538867	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300025949\|Ga0207667_10335455	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300025961\|Ga0207712_10023621	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4060	Open in IMG/M
3300025972\|Ga0207668_12102562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300026121\|Ga0207683_11086294	Not Available	742	Open in IMG/M
3300027639\|Ga0209387_1056109	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Calycomorphotria → Calycomorphotria hydatis	879	Open in IMG/M
3300027873\|Ga0209814_10338385	Not Available	658	Open in IMG/M
3300027886\|Ga0209486_10136713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1337	Open in IMG/M
3300027909\|Ga0209382_11498802	Not Available	672	Open in IMG/M
3300028587\|Ga0247828_11138956	Not Available	519	Open in IMG/M
3300031731\|Ga0307405_10483682	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300031903\|Ga0307407_10423188	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300032179\|Ga0310889_10017529	All Organisms → cellular organisms → Bacteria	2448	Open in IMG/M
3300033412\|Ga0310810_10008904	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	11590	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	55.14%
Environmental	Environmental	43.93%
Engineered	Engineered	0.93%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	55.14%
Terrestrial	Environmental → Terrestrial	41.12%
Aquatic	Environmental → Aquatic	2.80%
Solid Waste	Engineered → Solid Waste	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	35.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.76%
Sediment	Environmental → Aquatic → Sediment	1.87%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Roots	Host-Associated → Plants → Roots	0.93%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.93%
Grass	Engineered → Solid Waste → Grass	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	24.30%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.21%
Loam	Environmental → Terrestrial → Soil → Loam	10.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.87%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.93%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.93%
Composting	Engineered → Solid Waste → Grass → Composting	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	24.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.95%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.87%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.93%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.08%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.87%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.93%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.93%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.93%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4MG_04378650	2170459019	Switchgrass, Maize And Mischanthus Litter	AMGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERLVDQEGGRSKRVETRP
ICChiseqgaiiDRAFT_08999892	3300000033	Soil	VFGWGIPVALXTIAYQVVQEQGFVWRLVMTQHLKTGIAIAMLVFPLCGYLFGRYLWTTGEENYERMVESSGEDREPRIRTRQSARRGEYRDRADGHS*
JGI1027J11758_118005601	3300000789	Soil	MGRSTFXWRRGVFGWGIPVALXTIAYQVVQEQGFVWRLVMTXXLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERMVDQEGGRSKR
JGI10216J12902_1070272321	3300000956	Soil	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTSEENYARLVETRESRDRDGRNDQPK*
JGI24737J22298_101114311	3300001990	Corn Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTA
soilH2_101662782	3300003324	Sugarcane Root And Bulk Soil	MGRTTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGIAMLVFPLCGYLFGRYLWTAGEENYVRMVDQETGSSSKRVDTRP*
Ga0058689_100739781	3300004016	Agave	MGRSTFIWRRGVFGWGVPVALLTIAYQIVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTGEENYERMVDSKDANRKPAQRRRR*
Ga0062593_1004581492	3300004114	Soil	MGRTTFIWRRGVFGWAIPIALVTIAYQVVQEQGFVWRLVMTQHLKTGIGLAMLVFPLCGYLFGRYLWTIGEENYERMREAEETDRSRGP*
Ga0062589_1001064441	3300004156	Soil	MGRSTFIWRRGVFGWGVPVALLTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTGEENYERMVESKDPNGKSPPRRRR*
Ga0062589_1017839381	3300004156	Soil	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERLVDQEG
Ga0062590_1000800092	3300004157	Soil	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERLVDQEGGRSKRVETRP*
Ga0062595_1004329661	3300004479	Soil	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEDNYERMVDQEGGRSRRVDTRP*
Ga0062595_1013043641	3300004479	Soil	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERMVDQEGGRSKRVDTRP*
Ga0065712_100258702	3300005290	Miscanthus Rhizosphere	MGRSTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLRVGIGVAMLVFPLCGYLFGRYLWTAGEENYERMVDQEVGRTRRVDTRP*
Ga0065705_102569912	3300005294	Switchgrass Rhizosphere	MGRSTFIWRRGVFGWGVPVALLTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTGEENYERMVESKDPNGKSPPR
Ga0065707_100331032	3300005295	Switchgrass Rhizosphere	MGRSTFIWRRGVFGWGVPVALLTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTGEENYERMVESKDPNGKSPPRRRR
Ga0070658_100974703	3300005327	Corn Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTSEENYERMVDSRAARERNSRAGDRTDHPG*
Ga0066388_1011282512	3300005332	Tropical Forest Soil	GVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERLVDQEGGRSKRIDTRP*
Ga0066388_1032943621	3300005332	Tropical Forest Soil	GVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERLVDQEGGRSKRVETRP*
Ga0070677_108414541	3300005333	Miscanthus Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTSEENYARLVETRESRDPDTRNDQPK*
Ga0068869_1011490361	3300005334	Miscanthus Rhizosphere	MGRSTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEDNYERMVDQEGGRSRRVDTRP*
Ga0070680_1014438161	3300005336	Corn Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERMVDQEVGRTRRVDT
Ga0068868_1016702781	3300005338	Miscanthus Rhizosphere	AMGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEDNYERMVDQEGGRSRRVDTRP*
Ga0070692_111796021	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	IWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGHLFGRYLWTAGEENYERMVDQEGGRSKRVDTRP*
Ga0070671_1000959643	3300005355	Switchgrass Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTSEENYERMVDSRAARERNSRAGDRTDRPA*
Ga0070671_1006425612	3300005355	Switchgrass Rhizosphere	VFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTSEENYARMVETRESRDPDGRDDQQK*
Ga0070713_1008597662	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLIFPLCGYLFGRYLWTTGEENYERLVDQEGGRTKRVDTRP*
Ga0070711_1001662481	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLIFPLCGYLFGRYLWTTGEENYERLVDQEGGRTKRVDTRP*
Ga0070698_1003184622	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTGEENYERMVGSPPIRDRDTRIEQAE*
Ga0070699_1010871711	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTGEENYERMVGSPPIRDRDNRIEHAE*
Ga0070684_1003785022	3300005535	Corn Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTSEENYARMVQTRESRNSDGRNDQPK*
Ga0070665_1009056281	3300005548	Switchgrass Rhizosphere	RAMGRSTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERLVDQEGGRSRRVDTRP*
Ga0070665_1011503622	3300005548	Switchgrass Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTSEENYERMVDSRAARERNSRAGDLTDHPG*
Ga0068864_1004509352	3300005618	Switchgrass Rhizosphere	RSTFIWRRGVFGWGVPVALLTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTGEENYERMVESKDPNGKSPPRRRR*
Ga0068864_1012879562	3300005618	Switchgrass Rhizosphere	IWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERLVDQEGGRSKRVETRP*
Ga0068866_113865321	3300005718	Miscanthus Rhizosphere	GRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTSEENYERMVDSRAARERNSRAGDRTDHPG*
Ga0068863_1000714791	3300005841	Switchgrass Rhizosphere	MGRSTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLRVGIGVAMLVFPLCGYLFGRYLWTAGEENYERMVDQEVGGTRRVDTRP*
Ga0068863_1001425203	3300005841	Switchgrass Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTSEENYERMVDSRAARERNSRAGERTDRPG*
Ga0068862_1005221402	3300005844	Switchgrass Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTGEENYERMAKAEDTVDAHGHPKA
Ga0075417_104359131	3300006049	Populus Rhizosphere	MGRSTFIWRRGVFGWGVPVALITIAYQVVQEQGFVWRLVMTQHLKTGIAIAMLVFPLCGYLFGRYLWTTGEENYERMVESKDANGKSPPRRRR*
Ga0075417_105289312	3300006049	Populus Rhizosphere	MGRSTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTGEENYERMVEAQG
Ga0082029_17013771	3300006169	Termite Nest	GWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTTGEENYERLVDQESGRRERLDTRP*
Ga0075428_1003991502	3300006844	Populus Rhizosphere	MGRSTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERMVDQEGGRSKRVDTRP*
Ga0075421_1009411892	3300006845	Populus Rhizosphere	MGRSTFIWRRGVFGWGVPVALITIAYQVVQEQGFVWRLVMTQHLKTGIAIAMLVFPLCGYLFGRYLWTTGEENYERMVESKDPNGKSPPRRRR*
Ga0075421_1028155721	3300006845	Populus Rhizosphere	MGRSTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTGEENYERMVEAQGA
Ga0075430_1009074131	3300006846	Populus Rhizosphere	MGRSTFIWRRGVFGWGVPVALITIAYQVVQEQGFVWRLVMTQHLKTGIAIAMLVFPLCGYLFGRYLWTTGEENYERMVESKDANGNSPPRRRR*
Ga0075433_116079012	3300006852	Populus Rhizosphere	RWERNRAMGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTGEENYERMVDSKGTDQGSEKR*
Ga0079217_101316372	3300006876	Agricultural Soil	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMSQHLKTGIGLAILVFPLCGYLFGRYLWTAGEENYERMRKDGTGKRGRDDARN*
Ga0079218_102811471	3300007004	Agricultural Soil	QFIWRRGVFGWGIPVALLTIAYQIVQEQGFVWRLVMTQDLRSGIAVAAFVFPLCGYLFGRWLWTTGEENYQRMVQAEPEQPADE*
Ga0079218_140078511	3300007004	Agricultural Soil	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMSQHLKTGIGLAILVFPLCGYLFGRYLWTAGEENYERMRKD
Ga0111539_119426601	3300009094	Populus Rhizosphere	STFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERLVDQEGGRSKRVETRP*
Ga0105245_124227001	3300009098	Miscanthus Rhizosphere	GWGVPVALLTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTGEENYERMVESKDPNGKSPPRRRR*
Ga0075418_101815292	3300009100	Populus Rhizosphere	MGRSTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTTGEENYERLVDQKSDGRKRVETRP*
Ga0075418_129610901	3300009100	Populus Rhizosphere	MGRSTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTGEENYERMVEAQGTGDRESGTGKTG*
Ga0114129_100145146	3300009147	Populus Rhizosphere	MGRSTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTGEENYERMVEAQGAGDGESGTGKTG*
Ga0105243_121001041	3300009148	Miscanthus Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQYLKTGIGVAMLVFPLCGYLFGRYLWTTSEENYERMVDSRAARERNSRAGDRTDHPG*
Ga0075423_110401351	3300009162	Populus Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRMVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTGEENYERMVDSKGTDQGSEKR*
Ga0105241_121280861	3300009174	Corn Rhizosphere	MGRSTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLRVGIGVAMLVFPLCGYLFGRYLWTAGEENYERMVGQEVGRTRRVDTRP*
Ga0105242_117947092	3300009176	Miscanthus Rhizosphere	MGRSTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERLVDQEDGRSRRVDTRP*
Ga0105248_120244851	3300009177	Switchgrass Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTSEENYVRMVE
Ga0105238_106164082	3300009551	Corn Rhizosphere	MGRSTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEDNYERMVDQEGGRSRRVDTRH*
Ga0105238_127380092	3300009551	Corn Rhizosphere	AMGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERLVDQEGGRSKRVETRP*
Ga0126312_100801752	3300010041	Serpentine Soil	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTGEENYERMVGSPTIRDRDDQIEQAD*
Ga0126306_117850991	3300010166	Serpentine Soil	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTSEENYARMVETRESRERDGREDQTK*
Ga0126370_115331661	3300010358	Tropical Forest Soil	RRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVARLVLPLCGYLFGRYLWTAGEENYERLVDQEGGRSKRVDTRP*
Ga0134128_112628341	3300010373	Terrestrial Soil	MGRSTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLRVGIGVAMLVFPLCGYLFGRYLWTAGEDNYERMVDQEGGRSRRVDTRP*
Ga0134123_114995802	3300010403	Terrestrial Soil	PVALLTIAYQVVQEQGFVWRLVMTQHLRVGIGVAMLVFPLCGYLFGRYLWTAGEENYERMVDQEVGRTRRVDTRP*
Ga0127502_109046831	3300011333	Soil	MGRSTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLKTGIAIAMLVFPLCGYLFGRYLWTTGEENYERMVDSSGEDREPRIRTR*
Ga0150985_1064848912	3300012212	Avena Fatua Rhizosphere	FIWRRGVFGWGVPVALVTIAYQIVQEQGFVRRLVMTQHLKVGVGIAMLVFPLCGYLFGRYLWTAGEENYERLVDQEPGSSGWERSQRRR*
Ga0150985_1206270981	3300012212	Avena Fatua Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTSEESYERMVETR
Ga0157308_101251652	3300012910	Soil	WGVPVALLTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTGEENYERMVESKDVNGKSPPRRHR*
Ga0164303_104614531	3300012957	Soil	PVALLTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERLVDQEGGRSRRVDTRP*
Ga0164299_103632422	3300012958	Soil	MGRTTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLRVGIGVTMLVFPLCGYLFGRYLWTAGEENYERMVDQEAGSSNRVETRP*
Ga0164308_111985562	3300012985	Soil	MGRTTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLRVGIGVTMLVFPLCGYLFGRYLWTAGEENYERMVDQEAGSSNRVKTRP*
Ga0157374_127399951	3300013296	Miscanthus Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLRVGIGVAMLVFPLCGYLFGRYLWTAGEENYERMVDQEVGRTRRVDTRP*
Ga0163163_100028827	3300014325	Switchgrass Rhizosphere	MGRSTFIWRRGVFGWGIPVALLTIAYQVVQEQWFVWRLVMTQHLRVGIGVAMLVFPLCGYLFGRYLWTAGEDNYERMVDQEGGRSRRVDTRP*
Ga0157377_115601151	3300014745	Miscanthus Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTSEENYE
Ga0132258_100348824	3300015371	Arabidopsis Rhizosphere	MGRTTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLKVGIGVTMLVFPLCGYLFGRYLWTAGEENYERMVDQEGSRSKRVDTRP*
Ga0132258_103564052	3300015371	Arabidopsis Rhizosphere	MGRTTFIWRRGVFGWGIPVALITIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERMVDQEAGGSKRVDTRP*
Ga0132258_131100141	3300015371	Arabidopsis Rhizosphere	MARWERNRAMGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTGEENYERMVEAEDAQRPERR*
Ga0184624_101954971	3300018073	Groundwater Sediment	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAILVSPLCGYLFGRYLWTTSEETYERMVDSRAARERNSRAGDRTDRPG
Ga0190274_102217442	3300018476	Soil	MGRSTFIWRRGVFGWGVPVALLTIAYQVVQEQGFVWRLVMTQHLKTGIGIAMLVFPLCGYLFGRYLWTTGEENYERMVDSKDANGKSPPRRRR
Ga0190274_105563321	3300018476	Soil	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTGEENYERLVGRPPIREADREIEQAE
Ga0182009_105435732	3300021445	Soil	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEDNYE
Ga0222622_101823102	3300022756	Groundwater Sediment	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTSEENYERMVDSRAARERNSRAGDRTDHPG
Ga0207656_101509702	3300025321	Corn Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERLVDQEGGRSKRVETRP
Ga0207656_101973031	3300025321	Corn Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEDNYERMVDQEGGRSRRVDTRP
Ga0207682_103805551	3300025893	Miscanthus Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTSEENYARLVETRESRDPDTRNDQPK
Ga0207680_101587332	3300025903	Switchgrass Rhizosphere	MGRSTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEDNYERMVDQEGGRSRRVDTRP
Ga0207663_101383581	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	WRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLIFPLCGYLFGRYLWTTGEENYERLVDQEGGRTKRVDTRP
Ga0207650_101353661	3300025925	Switchgrass Rhizosphere	MGRSTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLRVGIGVAMLVFPLCGYLFGRYLWTAGEENYERMVDQEVGRTRRVDTRP
Ga0207659_113486651	3300025926	Miscanthus Rhizosphere	VALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERMVDQEGGRSKRVDTRP
Ga0207644_104443191	3300025931	Switchgrass Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTSEENYARMVETRESRDPDGRDDQQK
Ga0207670_105388671	3300025936	Switchgrass Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERLVDQEGGRSKRVE
Ga0207667_103354552	3300025949	Corn Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERLVDQEGG
Ga0207712_100236215	3300025961	Switchgrass Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERMVDQEGGRSKRVDTRP
Ga0207668_121025621	3300025972	Switchgrass Rhizosphere	WGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERLVDQEGGRSKRVETRP
Ga0207683_110862941	3300026121	Miscanthus Rhizosphere	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTGEENYERMVDSRAARERNSRAGDRTDHPG
Ga0209387_10561092	3300027639	Agricultural Soil	AMGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMSQHLKTGIGLAILVFPLCGYLFGRYLWTAGEENYERMRKDGTGKRGRDDARN
Ga0209814_103383851	3300027873	Populus Rhizosphere	MGRSTFIWRRGVFGWGVPVALITIAYQVVQEQGFVWRLVMTQHLKTGIAIAMLVFPLCGYLFGRYLWTTGEENYERMVDQET
Ga0209486_101367132	3300027886	Agricultural Soil	QFIWRRGVFGWGIPVALLTIAYQIVQEQGFVWRLVMTQDLRSGIAVAAFVFPLCGYLFGRWLWTTGEENYQRMVQAEPEQPADE
Ga0209382_114988021	3300027909	Populus Rhizosphere	MGRSTFIWRRGVFGWGVPVALITIAYQVVQEQGFVWRLVMTQHLKTGIAIAMLVFPLCGYLFGRYLWTTGEENYERMVESKDANGNSPPRRRR
Ga0247828_111389561	3300028587	Soil	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTSEENYERMVDSRAARER
Ga0307405_104836821	3300031731	Rhizosphere	MGRSTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLKTGIAIAMLVFPLCGYLFGRYLWTTGEENYERMVDSSGEDREPRIRTR
Ga0307407_104231881	3300031903	Rhizosphere	MGRSTFIWRRGVFGWGIPVALLTIAYQVVQEQGFVWRLVMTQHLKTGIAIAMLVFPLCGYLFGRYLWTTGEENYERMVDSSGEDREPR
Ga0310889_100175291	3300032179	Soil	IWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKVGIGVAMLVFPLCGYLFGRYLWTAGEENYERLVDQEGGRSKRVETRP
Ga0310810_100089045	3300033412	Soil	MGRSTFIWRRGVFGWGIPVALVTIAYQVVQEQGFVWRLVMTQHLKTGIGVAMLVFPLCGYLFGRYLWTTSEENYARMVQTRESRNSDGRNDQPK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092675

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences