NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F092650

Metagenome / Metatranscriptome Family F092650

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F092650
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 140 residues
Representative Sequence VAITERREIEFDLRALKLALEWSPRSAQAFGLPPLTPHAVRCNAAEGTVEVTYGELTSTRVFMLRAEAVGAILIAYCNRAGMPMPRAADKGVRIERDHVVVVLTLRIAGTPPPEVPESTITRVPEAVRAWSWIEMEH
Number of Associated Samples 95
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 50.47 %
% of genes near scaffold ends (potentially truncated) 46.73 %
% of genes from short scaffolds (< 2000 bps) 86.92 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (62.617 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(18.692 % of family members)
Environment Ontology (ENVO) Unclassified
(26.168 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(41.121 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.
1C688J35102_1203725322
2JGI26341J46601_101212721
3Ga0062389_1000367092
4Ga0062389_1049032561
5Ga0070676_109572811
6Ga0070683_1013282341
7Ga0070666_107669771
8Ga0070680_1012649391
9Ga0068868_1004616612
10Ga0070673_1020115331
11Ga0070713_1002697812
12Ga0070713_1003625202
13Ga0070713_1004639862
14Ga0070710_114752431
15Ga0070711_1004564602
16Ga0070679_1000209073
17Ga0070733_108482421
18Ga0070686_1016187021
19Ga0068857_1008816932
20Ga0068856_1004757632
21Ga0070764_104760352
22Ga0068866_109281251
23Ga0066903_1021402792
24Ga0070766_102839531
25Ga0081455_105571062
26Ga0075028_1000675212
27Ga0075018_104575942
28Ga0073928_108981311
29Ga0105248_101897574
30Ga0126378_100703634
31Ga0126377_112593442
32Ga0136449_1001477833
33Ga0136449_1007736782
34Ga0136449_1025218212
35Ga0134126_112318572
36Ga0153951_10239821
37Ga0150985_1114135102
38Ga0150984_1107817503
39Ga0157369_108827872
40Ga0163162_113816422
41Ga0163162_128748462
42Ga0182008_100452262
43Ga0182008_102860092
44Ga0181522_101355662
45Ga0157376_113083002
46Ga0132258_130387582
47Ga0132257_1035148431
48Ga0182041_112971471
49Ga0182040_111886661
50Ga0190274_120606571
51Ga0206354_104784451
52Ga0210395_100057453
53Ga0210405_108776901
54Ga0210396_106764722
55Ga0210396_106822771
56Ga0210385_107856331
57Ga0210397_101004555
58Ga0210397_105729631
59Ga0210387_106784721
60Ga0210386_104632361
61Ga0210386_113361932
62Ga0210391_109036431
63Ga0210390_100585804
64Ga0210392_107353852
65Ga0210402_103478302
66Ga0210410_100537971
67Ga0126371_112356291
68Ga0224712_100729283
69Ga0247676_10166262
70Ga0207692_107823101
71Ga0207692_108260571
72Ga0207680_112652422
73Ga0207695_108519462
74Ga0207652_106249442
75Ga0207700_101903181
76Ga0207700_106510071
77Ga0207704_117459171
78Ga0207677_120691191
79Ga0207702_109829842
80Ga0207674_105568351
81Ga0209040_100012988
82Ga0209517_103369411
83Ga0209167_101821511
84Ga0209068_109400121
85Ga0209624_101262644
86Ga0209415_108632941
87Ga0209006_100862855
88Ga0268266_103643911
89Ga0307503_106246171
90Ga0265460_101113732
91Ga0308201_100305122
92Ga0170824_1062614351
93Ga0307506_103966151
94Ga0318572_107691571
95Ga0307476_107726061
96Ga0306917_115904371
97Ga0318543_105609621
98Ga0318564_101830481
99Ga0308174_107365771
100Ga0306926_115033381
101Ga0311301_101096123
102Ga0306920_1039779681
103Ga0335078_106203632
104Ga0335069_102033332
105Ga0335073_100694533
106Ga0335077_118792592
107Ga0310811_107751441
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 18.79%    β-sheet: 28.48%    Coil/Unstructured: 52.73%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

20406080100120VAITERREIEFDLRALKLALEWSPRSAQAFGLPPLTPHAVRCNAAEGTVEVTYGELTSTRVFMLRAEAVGAILIAYCNRAGMPMPRAADKGVRIERDHVVVVLTLRIAGTPPPEVPESTITRVPEAVRAWSWIEMEHSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.77
Powered by PDBe Molstar

Structural matches with PDB biological assemblies



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
62.6%37.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Bog Forest Soil
Bog
Iron-Sulfur Acid Spring
Watersheds
Soil
Terrestrial Soil
Tropical Forest Soil
Surface Soil
Peatlands Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Forest Soil
Soil
Hardwood Forest Soil
Soil
Soil
Soil
Tropical Forest Soil
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
Corn Rhizosphere
Tabebuia Heterophylla Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Avena Fatua Rhizosphere
Attine Ant Fungus Gardens
3.7%2.8%4.7%2.8%5.6%18.7%4.7%3.7%8.4%3.7%3.7%3.7%3.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J35102_12037253223300002568SoilLVAITDRREIEFDLQTVRLVLEWSPRAAQAFGLPPLTPTAVHGNPTEGMIEVTYGELTSIRVFMLRAEALGAILISYCNRVGMPLRRNANKSVRIERDHVVVLLSHGQDAATAPELPEPAVGRIPEAVRAWSWIEADR*
JGI26341J46601_1012127213300003219Bog Forest SoilVAITDRREIRFDLHAVRLVIEWSPRSAQAFGLPLQTPEAVRCNPADGTVEVTYVDLTSTRVFTLRAEGLGAILISYCHRAGMPIPRTADKSVRIQPEHVVLVFTLRIASAQKPGQPEGPI
Ga0062389_10003670923300004092Bog Forest SoilMSGRGKGAFVAITERREIEFDLRALKLALEWSPRSAQAFGLPPLTPHAVRCNAAEGTVEVTYGELTSTRVFMLRAEAVGAILIAYCNRAGMPMPRAADKGVRIERDHVVVVLTLRIAGTPPPEVPESTITRVPEAVRAWSWIEMEH*
Ga0062389_10490325613300004092Bog Forest SoilIEFDLDAVRLAIEWSPRSAQAFGLPQQTPQTVRCNPTDGLLEVTYVDLTSTREFMLGADALGAILISYCHRVAMPVPRHADKAVRIEPEHVVVVFTLHLTNEKQPQQPEGAIGRVPDAARASLRTEAEH*
Ga0070676_1095728113300005328Miscanthus RhizosphereQAVRLALEWSPRSAQSFGLPPLTPNVVRCNPPDGTVEVTYGELTSTRVFVLRAEALGAILISYCNRAGMPMPRSADKAVRIDREQVVVVFSLHLPGAPEPELPEASIARVPEAVRAWAWIEADR*
Ga0070683_10132823413300005329Corn RhizosphereREIEFDMQAVKLALEWSPRSANAFGLPPLTPQSVRCHPTDGSVEVTYGELTSMRVFMLRAEALGAILIAYCNRAGMPMPRNADKAVRVEREHVVVVFTLRVPGLPRPALPEGHIGRVPEAVRAWSWVETER*
Ga0070666_1076697713300005335Switchgrass RhizosphereVAITDRREIVFDLQAVRLALEWSPRSAQSFGLPPLTPNVVRCNPPDGTVEVTYGELTSTRVFVLRAEALGAILISYCNRAGMPMPRSADKAVRIDREQVVVVFSLHLPGAPEPELPEASIARVPEAVRAWAWIEADR*
Ga0070680_10126493913300005336Corn RhizosphereTDRREIEFDLLGVKLALQWSPRAAQAFGLPPLTPSAVRCNAADGHVEVVYGVLNATRVFALRAEALGAILISYCNRSGMPMPRGANKAIRIEHDRIIVTFTMQVQDAVQPQAAESGVARAPEAVLAWSWIEPAR*
Ga0068868_10046166123300005338Miscanthus RhizosphereVAITDRREIEFDLQTVRLVLEWSPRAAQAFGLPPLIPTAVHGSSAEGAIEVTYGELTSTRVFMLRAEALGAILISYCSRVGMPMPRNADKGVRIERDNVVLLLSRRQETVTAPDLPEPTVGRIPEAVRAWSWIETEH*
Ga0070673_10201153313300005364Switchgrass RhizosphereMCGNANDVMRTRFTEPSFPFAKIAGREWGVPVPITDRREIEFDMQSVRLLLEWSPRSAQAFGLPPLTPQGVHCNPTDGTIEVTYGELTSTRVFVLRAEALGAILIAYCNRAGMPMPRHADKAVRIEREHVVVVFTLRMAAAPQPELPEGNIGRLPEAVRAWSWIEAER*
Ga0070713_10026978123300005436Corn, Switchgrass And Miscanthus RhizosphereAVRLVLEWSPRAAQGFGLPPLTPTAVHGNPAEGVVEVTYGELTSIRVFMLRAEALGAILISYCNRVGMPMPRNAEKGVRIERDHVVLMLSHHRDAVTAPELPEPVVGRIPEAVRAWSWIEADH*
Ga0070713_10036252023300005436Corn, Switchgrass And Miscanthus RhizosphereMVDSRYKGNAAVITDRREIEFDLQSVRLALEYSPRSAQAFGLPPLVPQSVRCNAADGTVEVTYGELTSTRVFLLRAEALGAILIAYCNRAGMPMPRAADKAVRVEREHVVVVFTLRLREVPQPEQPENAIVRVPDAVRAWAWIEADR*
Ga0070713_10046398623300005436Corn, Switchgrass And Miscanthus RhizosphereVPITDRRELEFDLQTVRLVLEWSPRAAQAFGLPPLTPAAVHGNPAEGVIEVTYGELTAMRVFMLRAEALGAILIAYCNRVGMPMPRNAEKGVRIERDHVVLLLSHRQDAVPAPDLPEPVVGRIPEAVRAWSWIEADH*
Ga0070710_1147524313300005437Corn, Switchgrass And Miscanthus RhizosphereIRIADAQQLASKRRFDDNANFVNAGLYGPSSSSATLPDCGEDPMVAITDRREIEFDTDAVKLALECSPCAAHAFGLPPLTPSAVRCRPVEALIQVTYGMLTTTRVFSLRAEALGAILIAYCNRAGMPMPRAADKAVRIEREHVVVVLTLRLRETPQLEGPEPPIGRLPDA
Ga0070711_10045646023300005439Corn, Switchgrass And Miscanthus RhizosphereMVDSRYKGNAAVITDRREIEFDLQSVRLVLEYSPRSAQAFGLPPLVPQSVRCNAADGTVEVTYGELTSTRVFLLRAEALGAILIAYCNRAGMPMPRAADKAVRVEREHVVVVFTLRLREVPQPEQPENAIVRVPDAVRAWAWIEADR*
Ga0070679_10002090733300005530Corn RhizosphereMLPPETKGLAVAITDRREIEFDLLGVKLALQWSPRAAQAFGLPPLTPSAVRCNAADGHVEVVYGVLNATRVFALRAEALGAILISYCNRSGMPMPRGANKAIRIEHDRIIVTFTMQVQDAVQPQAAESGVARAPEAVLAWSWIEPAR*
Ga0070733_1084824213300005541Surface SoilMLWIRRKDIVLSAAIIDRRAIEFDRESLRQVLEWSPHAAQAFGLPPLAPDSVRCKPADGVIEVTFGKLIATRVFMLRAEALGAILIAYCNRAGMPMPRHADKAVRIEREHAVLEFTLRMPDAPAPEVPEHPITRMPEPVRAWAWVEVEE*
Ga0070686_10161870213300005544Switchgrass RhizosphereVAITDRREIVFDLQAVRLALEWSPRSAQSFGLPPLTPNVVRCNPPDGTVEVTYGELTSTRVFVLRAEALGAILISYCNRAGMPMPRSADKAVRIDREQVVVVFSLHLPGAPEPELPEASIARVPEAVRAWAW
Ga0068857_10088169323300005577Corn RhizosphereVAITDRREIEFDLHTVRLVLEWSPRAAQAFGLPPLTPTAVRGNPTEGTIEVTYGELTSIRVFMLRAEALGAILLSYCKRVGMPMPRKADKGVRIERDQVVMLLSYRQDAPTAPELPEPATGRIPEAVRAWSWIETEH*
Ga0068856_10047576323300005614Corn RhizosphereVAITDRREIEFDLQTVRLVLEWSPRAAQAFGLPPLIPTAVHGSSAEGAIEVTYGELTSTRVFMLRAEALGAILISYCSRVGMPMPRNADKGVRIERDNVVLLLSRRQETVTAPDLPEPTVGRIPEAVRAWSWIEAEH*
Ga0070764_1047603523300005712SoilVAITDRREIELDTDAVKFALECSPCAAHAFGLPPLTPTAVRCRPAEALIQVTYGMLTTTRVFSLRAEALGAILIAYCNRAGVPMPRAADKAVRIEREHGVVVLTLRLRETPQLEGSEPPIGRLPDAIRVWSWIESDD*
Ga0068866_1092812513300005718Miscanthus RhizosphereMVVPGYKGNTVVITDRREIEFDLQAVKLVLEYSPRSAQAFGLPPLVPQSVRCNVTEGTVEVTYGELTSTRVFLLRAEALGAILIAYCNRAGMPMPRAADKAVRVEREHVVVVFTLRLRDVPQPDQPENAIVRVPDAVR
Ga0066903_10214027923300005764Tropical Forest SoilVAITDRREIAFDVQAIRLALEWSPRSAQSFGLPPLTPHAVRCNPADGTVEVTYGEFTSTRVFVVRAEALGAILISYCNRAGMPMPRSADKGVRIDHDGVAVVFTLHLPTAPEPELPEGNIARLPEAVRAWAWIEAGR*
Ga0070766_1028395313300005921SoilVAITERREIEFDLQALKLALEWSPRSAQAFGLPPLTPHAVRCNAAEGTVEVTYGELTSTRVFMLRAEAVGAILIAYCNRAGMPMPRAADKGVRIERDLVVVVLTLRIAGTPPPEAPESTITRVPEAVRAWSW
Ga0081455_1055710623300005937Tabebuia Heterophylla RhizosphereVTITDRREIEFDPDAVKQVLTWSPQSAQAFGLPPLTPQSVRCRPGNGTIEVTYGELVSTRIFALRAEALGAILIAYCNRSGMPMPRAADKAVRIEREHIVVVLTLRLAAAPSPEAPEGAIARVPDAVRAWSWIEAGG*
Ga0075028_10006752123300006050WatershedsMSGRGKGAFVAITERREIEFDLRAVQLALEWSPRSAQAFGLPPLTPHAVRCNAAEGTVEVTYGELTSTRVFMLRAEAVGAILIAYCNRAGMPMPRAADKGVRIERDHVVVVLTLRIAGTPPPEVPECTITRVPEAVRAWSWIEMEH*
Ga0075018_1045759423300006172WatershedsGAFVAITERREIEFDLRAVQLALEWSPRSAQAFGLPPLTPHAVRCNAAEGTVEVTYGELTSTRVFMLRAEAVGAILIAYCNRAGMPMPRAADKGVRIERDHVVVVLTLRIAGTPPPEVPECTITRVPEAVRAWSWIEMEH*
Ga0073928_1089813113300006893Iron-Sulfur Acid SpringLAITDRREIEFDLIAVKLALESSPRAAQAFGLPPLTPRDVRCDAAAGNVEVIYGELTSARVFALRPEALGAILISYCNRAGMPMPRAADKAVRIERAHVVVVFTLRLDGAPQPELPEGPIAHAPEAVRAWSWIEPAR*
Ga0105248_1018975743300009177Switchgrass RhizosphereVAITDRREIVFDLQAVRLALEWSPRSAQSFGLPPLTPNVVRCNPPDGTVEVTYGELTSTRVFVLRAEALGAILISYRNRAGMPMPRSADKAVRIDREQVVVVFSLHLPGAPEPELPEASIARVPEAVRAWAWIEADR*
Ga0126378_1007036343300010361Tropical Forest SoilVAITDRREIKFDLHAVRLVIEWSPRSAQAFGLPPQTPQAVRCNPADGTVEVTYVDLTSTRVFTLRAEALGAILISYCHRAGMPIPRTADKSVRIQPEHVVLVFVLRIASAQKPGQPEGPITRVPEGVRAVSRIEPDH*
Ga0126377_1125934423300010362Tropical Forest SoilVTITDRREIEFDPDAVKQVLTWSPQSAQAFGLPPLTPQSVRCRPGNGTIEVTYGELVSTRIFALRAEALGAILIAYCNRSGMPMPRAADKAVRIEPEHIVVVLTLRLTAAPSPEAPDDAIARVP
Ga0136449_10014778333300010379Peatlands SoilVAIVDRRDVEFDRDAVRLALQWSPKAAQAFGLPPLTPSAVRCRPAEGTIEVVYGTLTSTRVFALRAESLGPILISYCNRAGMPIPRHADKGIRVEHDHVVLVFTLRLYDTPNPEVPEPPVGHAPEAVQAWSWIETET*
Ga0136449_10077367823300010379Peatlands SoilMDPDRVAVVDRREIEFDCDAVKLAIKWSPKAAQAFGLPPLVPNTVRCNPVEGTIEVTYGMLTATRVFALRAELLGALLISYYNRAGMPMPRQADKGIRIERSHVVLVFTLRLRETPQPEIPEGPVSRAPETVQAWSWIEADT*
Ga0136449_10252182123300010379Peatlands SoilVSDRAKGAFVAITERREIEFDLRAVQLALEWSPRSAQAFGLPPLTPHAVRCNAAEGTVEVTYGELTSTRVFMLRAEAVGAILIAYCNRAGMPMPRAADKGVRIERDHVVVVLTLRITGAQPPEVPESTITRVPEAVRAWSWIEIEH*
Ga0134126_1123185723300010396Terrestrial SoilATLPDCGEDPMVAITDRREIEFDTDAVKFALECSPCAANAFGLPPLTPTAVRCRPVEALIQVTYGMLTTTRVFSLRAEALGAILIAYCNRTGMPMPRAADKAVRIEREHVVVVLTLRLRDTPQLEGPEPPIGRLPDAIRVWSWIESDD*
Ga0153951_102398213300011404Attine Ant Fungus GardensMLWIRRKDIVLSAAIIDRRAIEFDRESLRQVLEWSPHAAQAFGLPPLAPDSVRCKPADGVIEVTFGKLIATRVFMLRAEALGAILIAYCNRAGMPMPRHVDKAVRIEREHAVLEFTLRMPGAPAPEVPEHPIARMPEPVRAWAWVEVEE*
Ga0150985_11141351023300012212Avena Fatua RhizosphereLPVPITDRREIEFDLEAVRFALECSPRSAQALGLPPLAPQAVRCNPPTSTVEVTYGDFTSTRVFILRAEALGAILISYCNRSGMPMPRNAGKAVRVDREHIVVVFTLRMSRALQPELPEGQIARAPEAVRAWPWIETRR*
Ga0150984_11078175033300012469Avena Fatua RhizosphereVAITDRREIEFDLQTVRLVLEWSPRAAQAFGLPPLIPTAVHGSSAEGAIEVTYGELTSTRVFMLRAEALGAILISYCSRVGMPMPRNADKGVRIERDNVVLLLSRRQETVTAPDLPEPTVGRIPE
Ga0157369_1088278723300013105Corn RhizosphereVAITDRREIEFELHTVRLVLEWSPRAAQAFGLPPLTPTAVRGNPTEGTIEVTYGELTSIRVFMLRAEALGAILLSYCKRVGMPMPRKADKGVRIERDQVVVLLSYRQDAPTAPELPEPATGRIPEAVRAWSWIETEH*
Ga0163162_1138164223300013306Switchgrass RhizosphereLVAITDRREIEFDLQTVRLVLEWSPRAAQAFGLPPLTPTAVHGNPAEGVIEVTYGELTSTRVFMLRAEALGAILISYCNRVGMPMPRKADKSVRIERDHVVVLLSYRQDAATAPELPEPGVGRIPEAVRAWSWIEADH*
Ga0163162_1287484623300013306Switchgrass RhizosphereVAITDRREIVFDLQAVRLALEWSPRSAQSFGLPPLTPNVVRCNPPDGTVEVTYGELTSTRVFVLRAEALGAILISYCNRAGMPMPRSADKAVRIDREQVVVVFSLHLPGAPEPELPEASIARVPEAVRAWAWI
Ga0182008_1004522623300014497RhizosphereLVPITDRRELEFDLQTVRLVLEWSPRAAQAFGLPPLTPTAVHGNPVEGVIEVTYGELTSTRVFMLRAEALGAILISYCNRVGMPMPRNAEKGVRIERDQAVLLLSHRQEALTAPEVPEPVIGRIPEAVRAWSWIEADH*
Ga0182008_1028600923300014497RhizosphereSPRAAQAFGLPPLTPTAVRGNPTEGTIEVTYGELTSIRVFMLRAEALGAILLSYCKRVGMPMPRKADKGVRIERDQVVMLLSYRQDAPTAPELPEPATGRIPEAVRAWSWIETEH*
Ga0181522_1013556623300014657BogLAIVDRREIAFDADAMRFVIECSPRAALAFGLPPLTPQAVRCNVADGHIEVVYGTLTATRVFALRAEALGAIIVSYCNRTGMPMPRHADKGIRVERDRVVLVFTLRLEDAPEPEIAEGSIAHAPEAVRAWSWMEPPRA*
Ga0157376_1130830023300014969Miscanthus RhizosphereVLAYSPRSAQAFGLPPLVPQSVRCNVTEGTVEVTYGELTSTRVFLLRAEALGAILIAYCNRAGMPMPRAADKAVRVEREHVVVVFTLRLRDVPQPDQPENAIVRVPDAVRAWAWIEADR*
Ga0132258_1303875823300015371Arabidopsis RhizosphereVAVTDRREIDFDTDAVRQAVEWSPRAAQAFGLPPLVPTGLRCNPAVGCVEVVYGTLTTTRVFALRAEALGALLVSYCNRAGMPMPRFADKGIRLEKDHVVLVITLRLEGPPSPDAPEGHITRAPEAVQAWSWIESPN*
Ga0132257_10351484313300015373Arabidopsis RhizosphereVAVTDRREIDFDTDAVRQAVEWSPRAAQAFGLPPLVPTGLRCNPAVGCVEVVYGTLTTTRVFALRAEALGALLVSYCNRAGMPMPRFADKGIRLEKDHVVLVITLRLEGPPSPDAP
Ga0182041_1129714713300016294SoilRTSPARSEPRRRGGVLQRARAPPGALPCLHPSMRRSPREARALRVAITDRREIKFDLHAVRLVIEWSPRSAQAFGLPPQTPQAVRCNPADGTVEVTYVDLTSTRVFTLRAEALGAILISYCHRAGMPIPRTADKSVRIQPEHVVLVFVLRIASAQKPGQPEGPITRVPEGVRAVSRIEPD
Ga0182040_1118866613300016387SoilGVLQRARAPPGALPCLHPSMRRSPREARALRVAITDRREIKFDLHAVRLVIEWSPRSAQAFGLPPQTPQAVRCNPADGTVEVTYVDLTSTRVFTLRAEALGAILISYCHRAGMPIPRTADKSVRIQPEHVVLVFVLRIASAQKPGQPEGPITRVPEGVRAVSRIEPDH
Ga0190274_1206065713300018476SoilMCGNANDVMRTRFTEPSFPFAKIAGREWGVPVPITDRREIEFDMQSVRLLLEWSPRSAQAFGLPPLTPQGVHCNPTDGTIEVTYGELTSTRVFVLRAEALGAILIAYCNRAGMPMPRHADKAVRIEREHVVVVFTLRMAAAPQPELPEGNIGRLPEAVRAWSWIE
Ga0206354_1047844513300020081Corn, Switchgrass And Miscanthus RhizosphereVAITDRREIEFDLQTVRLVLEWSPRAAQAFGLPPLIPTAVHGSSAEGAIEVTYGELTSTRVFMLRAEALGAILISYCSRVGMPMPRNADKGVRIERDNVVLLLSRRQETVTAPDLPEPTVGRIPEAVRA
Ga0210395_1000574533300020582SoilMSGRGKGAFVAITERREIEFDLRALKLALEWSPRSAQAFGLPPLTPQAVRCNAAEGTVEVTYGELTSTRVFMLRAEAVGAILIAYCNRAGMPMPRAADKGVRIERDHVVVVLTLRIAGTPPPEVPESTITRVPEAVRAWSWIEMEH
Ga0210405_1087769013300021171SoilLAITDRREIEFDLIAVKLALESSPRAAQAFGLPPLTPRDVRCDAAAGNVEVIYGELTSARVFALRAEALGAILISYCNRAGMPMPRAADKAVRIERAHVVVVFTLRLDGAPQPELPEGPIAHAPEAVR
Ga0210396_1067647223300021180SoilMLWIRRKDIVLSAAIIDRRAIEFDRESLRQVLEWSPHAAQAFGLPPLAPDSVRCKPADGVIEVTFGKLIATRVFMLRAEALGAILIAYCNRAGMPMPRHADKAVRIEREHAVLEFTLRMPGAPAPEVPEHPIARMPEPVRAWAWVEVEE
Ga0210396_1068227713300021180SoilMAIVDRREIEFDRDAVKLALEWSPQAAQAFGLPPLKPDGVRCKPADGLVQVTYGKLTATRVFTLRAEALGAILIAYCNRAGMPMARNADKAVRIERDHVVVVFTLRIPHASRPEAAESLVNRMPEAVSTWAWVEGDN
Ga0210385_1078563313300021402SoilMSGRGKGAFVAITERREIEFDLRAVQLALEWSPRSAQAFGLPPLTPHAVRCNAAEGTVEVTYGELTSTRVFMLRAEAVGAILIAYCNRAGMPMPRAADKGVRIEHDHVVVVLTLRIAGAQPPEVPESTITRVPEAVRAWSWIEMEH
Ga0210397_1010045553300021403SoilVTIVDRREIELDTAAVRRALELSPRAAQAFGLPPLVPAGVRCNSRDGCIEVVYGTLTATRVFGLRAEALGALLISYCNRAGMPLPRHADKGVRVEREHVVLVCTLRLDEPPQPEAPEGQISHAPEAIQAWSWIESPS
Ga0210397_1057296313300021403SoilMMSDRAKGAFVAITERREIEFDLRALKLALEWSPRSAQAFGLPPLTPHAVRCNAAEGTVEVTYGELTSTRVFMLRAEAVGAILIAYCNRAGMPMPRAADKGVRIERDHVVVVLTLRIAGTPPPEVPESTITRVPEAVR
Ga0210387_1067847213300021405SoilVAITDRREIEFDTDAVKFALECSPCAAHAFGLPPLTPTAVRCRPAEALIQVTYGMLTTTRVFSLRAEALGAILIAYCNRAGMPMPRAADKAVRIEREHVVVVLTLRLRETPQLEGSEPPIGRLPDAIRVWSWIESDD
Ga0210386_1046323613300021406SoilMAIVDRRKIEFDRDAVKLALEWSPQAAQAFGLPPLKPDGVRCKPADGLVQVTYGKLTATRVFTLRAEALGAILIAYCNRAGMPMARNADKAVRIERDHVVVVFTLRIPHASRPEAAESLVNRMPEAVSTWAWVEGDN
Ga0210386_1133619323300021406SoilPFARGTFRLAITDRREIEFDLIAVKLALESSPRAAQAFGLPPLTPRDVRCDAAAGNVEVIYGELTSARVFALRAEALGAILISYCNRAGMPMPRAADKAVRIERAHVVVVFTLRLDGAPQPELPEGPIAHAPEAVRAWSWIEPAR
Ga0210391_1090364313300021433SoilMSGRGKGAFVAITERREIEFDLRALKLALEWSPRSAQAFGLPPLTPQAVRCNAAEGTVEVTYGELTSTRVFMLRAEAVGAILIAYCNRAGMPMPRAADKGVRIERDHVVVVLTLRIAGTPPPEVPESTITRVPEAVRAWSWIE
Ga0210390_1005858043300021474SoilVAITERREIEFDLRALKLALEWSPRSAQAFGLPPLTPHAVRCNAAEGTVEVTYGELTSTRVFMLRAEAVGAILIAYCNRAGMPMPRAADKGVRIERDHVVVVLTLRIAGTPPPEVPESTITRVPEAVRAWSWIEMEH
Ga0210392_1073538523300021475SoilDPSSSTATLQDCGEDPLVAITDRREIEFDTDAVKFALECSPCAAHAFGLPPLTPTAVRCRPAEALIQVTYGMLTTTRVFSLRAEALGAILIAYCNRAGMPMPRAADKAVRIEREHVVVVLTLRLRETPQLEGSEPPIGRLPDAIRVWSWIESDD
Ga0210402_1034783023300021478SoilVTIVDRREIELDTAAVQHALEWSPRAAQAFGLPPLVPTGVRCNSKDGCIEVVYGTLTATRVFALRAEALGALLISYCNRAGMPLPRHSDKGVRVEREHVVLVCTLRLDEPPQPEAPEGQISRAPEAVQAWSWIESPS
Ga0210410_1005379713300021479SoilMSGRGKGAFVAITERREIEFDLRALKLALEWSPRSAQAFGLPPLTPHAVRCNAAEGTVEVTYGELTSTRVFMLRAEAVGAILIAYCNRAGMPMPRAADKGVRIERDHVVVVLTLRIAGTPPPEVPESTITRVPEAVRAWSWIEMEH
Ga0126371_1123562913300021560Tropical Forest SoilFDLHAVRLVIEWSPRSAQAFGLPPQTPQAVRCNPADGTVEVTYVDLTSTRVFTLRAEALGAILISYCHRAGMPIPRTADKSVRIQPEHVVLVFVLRIASAQKPGQPEGPITRVPEGVRAVSRIEPDH
Ga0224712_1007292833300022467Corn, Switchgrass And Miscanthus RhizosphereVAITDRREIEFDLHTVRLVLEWSPRAAQAFGLPPLTPTAVRGNPTEGTIEVTYGELTSIRVFMLRAEALGAILLSYCKRVGMPMPRKADKGVRIERDQVVVLLSYRQDAPTAPELPEPATGRIPEAVRAWSWIETEH
Ga0247676_101662623300024249SoilMVAITDRREIEFDTDAVKLALECSPCAAHAFGLPSLTPSAVRCRPAEALIQVTYGMLTTTRVFGLRAEALGAILIAYCNRAGMPMPRAADKAVRIEREHVVVVLTLRLRETPQLEGPEPPIGRLPDAVRVWSWIESDD
Ga0207692_1078231013300025898Corn, Switchgrass And Miscanthus RhizosphereSSSATLPECGEDPMVAITDRREIEFDTDAVKLALECSPCAAHAFGLPPLTPSAVRCRPVEALIQVTYGMLTTTRVFSLRAEALGAILIAYCNRAGMPMPRAADKAVRIEREHVVVVLTLRLRETPQLEGPEPPIGRLPNAIRVWSWIEGDD
Ga0207692_1082605713300025898Corn, Switchgrass And Miscanthus RhizosphereTGCSWGHGMVDHRYKGNAAVITDRREIEFDLQSVRLVLEYSPRSAQAFGLPPLVPQSVRCNAADGTVEVTYGELTSTRVFLLRAEALGAILIAYCNRAGMPMPRAADKAVRVEREHVVVVFTLRLREVPQPEQPENAIVRVPDAVRAWAWIEADR
Ga0207680_1126524223300025903Switchgrass RhizosphereVAITDRREIVFDLQAVRLALEWSPRSAQSFGLPPLTPNVVRCNPPDGTVEVTYGELTSTRVFVLRAEALGAILISYCNRAGMPMPRSADKAVRIDREQVVVVFSLHLPGAPEPELPE
Ga0207695_1085194623300025913Corn RhizospherePRSAQSFGLPPLTPNVVRCNPPDGTVEVTYGELTSTRVFVLRAEALGAILISYCNRAGMPMPRSADKAVRIDREQVVVVFSLHLPGAPEPELPEASIARVPEAVRAWAWIEADR
Ga0207652_1062494423300025921Corn RhizosphereAFSFTVRSFERPMLPPEMKGLAVAITDRREIEFDLLGVKLALQWSPRAAQAFGLPPLTPSAVRCNAADGHVEVVYGVLNATRVFALRAEALGAILISYCNRSGMPMPRGANKAIRIEHDRIIVTFTMQVQDAVQPQAAESGVARAPEAVLAWSWIEPAR
Ga0207700_1019031813300025928Corn, Switchgrass And Miscanthus RhizosphereMRPEEDPLVAITDRREIEFDLQAVRLVLEWSPRAAQGFGLPPLTPTAVHGNPAEGVVEVTYGELTSIRVFMLRAEALGAILISYCNRVGMPMPRNAEKGVRIERDHVVLMLSHHRDAVTAPELPEPVVGRIPEAVRAWSWIEADH
Ga0207700_1065100713300025928Corn, Switchgrass And Miscanthus RhizosphereLAITDRREIEFDLIAVKLALESSPRAAQAFGLPPLTPRDVRCDAAAGNVEVIYGELTSARVFALRAEALGAILISYCNRAGMPMPRAADKAVRIERAHVVVVFTLRLDGAPQPELPEGPIAHAPEAVRAWSWIEP
Ga0207704_1174591713300025938Miscanthus RhizosphereMCGNANDVMRTRFTEPSFPFAKIAGREWGVPVPITDRREIEFDMQSVRLLLEWSPRSAQAFGLPPLTPQGVHCNPTDGTIEVTYGELTSTRVFVLRAEALGAILIAYCNRAGMPMPRHADKAVRIEREHVVVVFTLRIAAAPQPELPEGNIGRLPEAVRAWSWIEAER
Ga0207677_1206911913300026023Miscanthus RhizosphereVAITDRREIEFDLQTVRLVLEWSPRAAQAFGLPPLIPTAVHGSSAEGAIEVTYGELTSTRVFMLRAEALGAILISYCSRVGMPMPRNADKGVRIERDNVVLLLSRRQETVTAPDLPEPTVGRIPEAVRAWSWIETEH
Ga0207702_1098298423300026078Corn RhizosphereVAITDRREIEFDLQTVRLVLEWSPRAAQAFGLPPLIPTAVHGSSAEGAIEVTYGELTSTRVFMLRAEALGAILISYCSRVGMPMPRNADKGVRIERDNVVLLLSRRQETVTAPDLPEPTVGRIPEAVRAWSWIEAEH
Ga0207674_1055683513300026116Corn RhizosphereVAITDRREIEFDLHTVRLVLEWSPRAAQAFGLPPLTPTAVRGNPTEGTIEVTYGELTSIRVFMLRAEALGAILLSYCKRVGMPMPRKADKGVRIERDQVVMLLSYRQDAPTAPELPEPATGRIPEAVRAWSWIETEH
Ga0209040_1000129883300027824Bog Forest SoilVAITDRREIRFDLHAVRLVIEWSPRSAQAFGLPLQTPEAVRCNPADGTVEVTYVDLTSTRVFTLRAEGLGAILISYCHRAGMPIPRTADKSVRIQPEHVVLVFTLRIASAQKPGQPEGPITRVPEGVRAVPRIEPDH
Ga0209517_1033694113300027854Peatlands SoilVAIVDRRDIEFDRDAVRLAIQWSPKASQAFGLPPLTPSAVRCRPAEGTIEVVYGTLTSTRIFALRAQSLGAILISYCNRTGMPIPRHADKGIRIERDHVVLVFTLRLYDTPNPEVPEPPVGHAPEAVQAWSWIETET
Ga0209167_1018215113300027867Surface SoilMLWIRRKDIVLSAAIIDRRAIEFDRESLRQVLEWSPHAAQAFGLPPLAPDSVRCKPADGVIEVTFGKLIATRVFMLRAEALGAILIAYCNRAGMPMPRHADKAVRIEREHAVLEFTLRMPDAPAPEVPEHPITRMPEPVRAWAWVEVEE
Ga0209068_1094001213300027894WatershedsVRFTVPSYRDATMSGRGKGAFVAITERREIEFDLRAVQLALEWSPRSAQAFGLPPLTPHAVRCNAAEGTVEVTYGELTSTRVFMLRAEAVGAILIAYCNRAGMPMPRAADKGVRIERDHVVVVLTLRIAGTPPPEVPECTITRVPEAVRAWSWIEMEH
Ga0209624_1012626443300027895Forest SoilVAITERREIEFDLRALKLALEWSPRSAQAFGLPPLTPHAVRCNAAEGTVEVTYGELTSTRVFMLRAEAVGAILIAYCNRAGMPMPRAADKGVRIERDHVVVVLTLRIAGTPPPEVPESTITRV
Ga0209415_1086329413300027905Peatlands SoilAIVDRRDVEFDRDAVRLALQWSPKAAQAFGLPPLTPSAVRCRPAEGTIEVVYGTLTSTRIFALRAESLGPILISYCNRAGMPIPRHADKGIRVERDHVVLVFTLRLYDTPNPEVPEPPVGRAPEAVQAWSWIETPT
Ga0209006_1008628553300027908Forest SoilVTIVDRREIELDTAAVRRALELSPRAAQAFGLPPLVPAGVRCNSRDGCIEVVYGTLTATRVFGLRAEALGALLISYCNRAGMPLPRHADKGVRVEREHVVLVCTLRLDEPPQPETPEGQISHAPEAIQAWSWIASPS
Ga0268266_1036439113300028379Switchgrass RhizosphereFIPACDDALRDGGVAVAITDRREIVFDLQAVRLALEWSPRSAQSFGLPPLTPNVVRCNPPDGTVEVTYGELTSTRVFVLRAEALGAILISYCNRAGMPMPRSADKAVRIDREQVVVVFSLHLPGAPEPELPEASIARVPEAVRAWAWIEADR
Ga0307503_1062461713300028802SoilPACDDDPETTETLPVPITDRREIEFDLEAVRFALECSPRSAQALGLPSLAPQAVRCNPPTSTVEVTYGDLTSTRVFILRAEALGAILISYCNRSGMPMPRNAGKAVRVDREHIVVVFTLRMSRALQPELPEGPIARAPEAVRAWPWIETRR
Ga0265460_1011137323300030740SoilMSGRGKGAFVAITERREIEFDLRALKLALEWSPRSAQAFGLPPLTPHAVRCNAAEGTVEVTYGELTSTRVFMLRAEAVGAILIAYCNRAGMPMPRAADKGVRVERDHVVVVLTLRIAGTPPPAVPESTITRVPEAVRAWSWIEMEH
Ga0308201_1003051223300031091SoilMETLPAPITDRREIEFDLQAVKFALECSPRSAQAFGLPPLTPQAVRCNPPAGTVEVTYGELTSTRVFILRAEALGAILISYCSRTGVPIPRNADKAVRVDREHIVVVFTLRMSPALQPELPESPIARAPEAVRAWAWIEAQR
Ga0170824_10626143513300031231Forest SoilMVAITDRREIEFDTDAVKLALECSPCAAHAFGLPPLTPSAVRCRPVEALIQVTYGMLTTTRVFSLRAEALGAILIAYCNRAGMPMPRAADKAVRIEREHVVVVLTLRLRETPQLEGPEPPIGRLPDAIRVWSWIEGDD
Ga0307506_1039661513300031366SoilPAKILGHEGDVAVAITDRREIEFDMQSVRLLLEWSPRSAQAFGLPPLTPDGVHCNPAAGTIEVTYGELTSTRVFVLRAEALGAILISYCSRAGMPMPRNADKAVRIEREHVVVVFTLRLPAPPQPELPEPHITRLPEAVRAWSWIEAER
Ga0318572_1076915713300031681SoilVAITDRREIKFDLHAVRLVIEWSPRSAQAFGLPPQTPQAVRCNPADGTVEVTYVDLTSTRVFTLRAEALGAILISYCHRAGMPIPRTADKSVRIQPEHVVLVFVLRIASAQKPGQPEGPITRVPEGVRAVSRIEP
Ga0307476_1077260613300031715Hardwood Forest SoilMLWIRRKDIVLSAAIIDRRAIEFDRESLRQVLEWSPHAAQAFGLPPLAPDSVRCKPADGVIEVTFGKLIATRVFMLRAEALGAILIAYCNRAGMPMPRHADKAVRIEREHAVLEFTLRMASAPAPEVPEHPITRMPEPVRAWAWVEVEE
Ga0306917_1159043713300031719SoilPPGALPCLHPSMRRSPREARALRVAITDRREIKFDLHAVRLVIEWSPRSAQAFGLPPQTPQAVRCNPADGTVEVTYVDLTSTRVFTLRAEALGAILISYCHRAGMPIPRTADKSVRIQPEHVVLVFVLRIASAQKPGQPEGPITRVPEGVRAVSRIEPDH
Ga0318543_1056096213300031777SoilVAITDRREIKFDLHAVRLVIEWSPRSAQAFGLPPQTPQTVRCSPADGTVGVTYVDLTSTRVFTLRAEALGAILISYCHRAGMPIPRTADKSVRIQPEHVVLVFVLRIASAQKPGQPEG
Ga0318564_1018304813300031831SoilVAITDRREIKFDLHAVRLVIEWSPRSAQAFGLPPQTPQAVRCNPADGTVEVTYVDLTSTRVFTLRAEALGAILISYCHRAGMPIPRTADKSVRIQPEHVVLVFVLRIASAQKPGQPEGPITRVPEGVRAVSRIEPDH
Ga0308174_1073657713300031939SoilVPITDRRELEFDLQTVRLVLEWSPRAAQAFGLPPLTPTAVHGNPVEGVIEVTYGELTSTRVFMLRAEALGAILISYCNRVGTPMPRNAEKGVRIERDQVVLLLSHRQEALTAPEVPEPVIGRIPE
Ga0306926_1150333813300031954SoilPREARALRVAITDRREIKFDLHAVRLVIEWSPRSAQAFGLPPQTPQAVRCNPADGTVEVTYVDLTSTRVFTLRAEALGAILISYCHRAGMPIPRTADKSVRIQPEHVVLVFVLRIASAQKPGQPEGPITRVPEGVRAVSRIEPDH
Ga0311301_1010961233300032160Peatlands SoilVRLALQWSPKAAQAFGLPPLTPSAVRCRPAEGTIEVVYGTLTSTRVFALRAESLGPILISYCNRAGMPIPRHADKGIRVEHDHVVLVFTLRLYDTPNPEVPEPPVGHAPEAVQAWSWIETET
Ga0306920_10397796813300032261SoilSAPGPPGALPCLHASVRRSPPEARALRVAITDRREIKFDLHAVRLVIEWSPRSAQAFGLPPQTPQAVRCNPADGTVEVTYVDLTSTRVFTLRAEALGAILISYCHRAGMPIPRTADKSVRIQPEHVVLVFALRIASAQKPGQPEGPITRVPEGVRAVCRIEPDH
Ga0335078_1062036323300032805SoilVAITERREIEFDLHAVRLALEWSPRSAQAFGLPPLTPQAVHCDPTEGTVAVTYGELTSTRVFMLRAEALGAILIAYCNRSGMPMPRTADKGVRIEREHVVIVFTLRVTGAPPPEAPEGTISRMPEAVRAWSWIEAER
Ga0335069_1020333323300032893SoilVGIIEQRELAFARETVRQVLEWSPQSAQAFGLPPLMPQAVRCNPTEGAIEVTYGELTSTRVFMLRAEAVGAILIAYCNRAGMPVPRYADKAVRIDREQVVVVFTLHTPFPRRPDLPEGAIGRAPEAVRAWAWITPER
Ga0335073_1006945333300033134SoilMAIVDRREIEFDRDAVRLALEWSPQAAQAFGLPPLTPDGVRCKPAEGLVEVTYGRLTTTRVFMLHAEALGAILIAYCNRAGMPMPRNADKAVRIESGHVVVVFTLRMAHAPHPEVPENPVHRVPDAVRAWAWVESDT
Ga0335077_1187925923300033158SoilAITERREIEFDLHAVRLALEWSPRSAQAFGLPPLTPQAVHCDPTEGTVAVTYGELTSTRVFMLRAEALGAILIAYCNRSGMPMPRTADKGVRIEREHVVIVFTLRVTGAPPPEAPEGTISRMPEAVRAWSWIEAER
Ga0310811_1077514413300033475SoilVAITDRREIEFDTDAVKVALECSPCAANAFGLPPLAPSAVRCRPADALIQVTYGMLTTTRVFSLRAEALGAILIAYCNRAGMPMPRAADKAVRIEREHVVVVLTLRLRETPQLEAPEPSIGRLPD


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.