NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F092553

Metagenome Family F092553

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F092553
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 132 residues
Representative Sequence MALWFFQRTAPGNIRRIPLPSMQRFLAGERALAHDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVRGDGRVDPEHRARVVREAGSRGHGHGAVIHAAHRFAERRLAHLAEWRPEESDLQALRSAVNGRAGKEMI
Number of Associated Samples 79
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 72.90 %
% of genes near scaffold ends (potentially truncated) 36.45 %
% of genes from short scaffolds (< 2000 bps) 75.70 %
Associated GOLD sequencing projects 66
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(38.318 % of family members)
Environment Ontology (ENVO) Unclassified
(51.402 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(59.813 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186.188.190.192
1JGI12053J15887_101320672
2C688J18823_101434312
3Ga0063454_1011855901
4Ga0062595_1000983213
5Ga0066672_101821152
6Ga0066677_100253742
7Ga0066680_100935251
8Ga0066673_100084293
9Ga0066673_100135263
10Ga0066679_106486721
11Ga0066684_101019012
12Ga0066671_100390573
13Ga0066676_103047892
14Ga0066676_108370061
15Ga0066675_106458831
16Ga0066675_107509711
17Ga0066675_112554451
18Ga0066687_100253812
19Ga0070741_114738502
20Ga0066697_107093711
21Ga0066701_100017968
22Ga0066701_105037282
23Ga0066704_101875232
24Ga0066704_103248272
25Ga0066704_104863621
26Ga0066700_102036471
27Ga0066670_100984243
28Ga0066699_106542161
29Ga0066702_104502731
30Ga0066696_1000143411
31Ga0066696_100068033
32Ga0066696_102268692
33Ga0066696_105378512
34Ga0075417_100500393
35Ga0070716_1017298841
36Ga0066659_115690222
37Ga0066660_106739901
38Ga0075421_1004309532
39Ga0075433_102140851
40Ga0075419_108413742
41Ga0099793_100937781
42Ga0099793_104055812
43Ga0066710_1023958592
44Ga0099829_100097895
45Ga0099830_100073495
46Ga0099828_106282982
47Ga0066709_1010230692
48Ga0066709_1028994741
49Ga0099792_101767232
50Ga0099792_109253211
51Ga0114129_107379132
52Ga0114129_125547621
53Ga0075423_100119061
54Ga0099796_101053432
55Ga0134067_100763651
56Ga0126372_105582811
57Ga0126372_128889601
58Ga0137380_100012475
59Ga0150985_1008165261
60Ga0150985_1066239492
61Ga0150985_1141264231
62Ga0137384_105772861
63Ga0150984_1075676012
64Ga0150984_1186729222
65Ga0137398_100762512
66Ga0137396_100225562
67Ga0137419_108147051
68Ga0137407_100835222
69Ga0134087_107050961
70Ga0137418_107107142
71Ga0066655_100795552
72Ga0066655_105482871
73Ga0066667_100721592
74Ga0066662_100406343
75Ga0179596_101645722
76Ga0179596_104703832
77Ga0137417_10815572
78Ga0207665_101064432
79Ga0207665_114588561
80Ga0209027_10245832
81Ga0209238_10190952
82Ga0209239_13572881
83Ga0209153_10827772
84Ga0209801_11046201
85Ga0209804_12860032
86Ga0209690_10075146
87Ga0209058_11122772
88Ga0209805_10252542
89Ga0209805_11466421
90Ga0209156_104735121
91Ga0209474_100334522
92Ga0209474_101740292
93Ga0209474_102202332
94Ga0209577_100607643
95Ga0209577_102731613
96Ga0209588_10548122
97Ga0209689_13459342
98Ga0209180_100178412
99Ga0209488_100227564
100Ga0209488_100303102
101Ga0209488_105436302
102Ga0209488_111309781
103Ga0209382_104571322
104Ga0137415_103192161
105Ga0307308_105690281
106Ga0307471_1002834672
107Ga0372943_0856076_249_599
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 33.09%    β-sheet: 31.62%    Coil/Unstructured: 35.29%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

20406080100120MALWFFQRTAPGNIRRIPLPSMQRFLAGERALAHDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVRGDGRVDPEHRARVVREAGSRGHGHGAVIHAAHRFAERRLAHLAEWRPEESDLQALRSAVNGRAGKEMISequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Vadose Zone Soil
Tropical Forest Soil
Grasslands Soil
Surface Soil
Soil
Soil
Grasslands Soil
Soil
Hardwood Forest Soil
Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Avena Fatua Rhizosphere
Populus Rhizosphere
Avena Fatua Rhizosphere
23.4%38.3%9.3%4.7%2.8%2.8%7.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12053J15887_1013206723300001661Forest SoilMALWFFQRTAPGNLCRIPLPSMQRFLAGESALADDGDGYVRCIGMAVELRGRKPSAVRRVWFSKIRVSGDGRVDPEHRPRALREAGAKGHGHGPVVHAGHRFAERRLAHLAEWRPEESDLQALRIAVNGRAGKEMI*
C688J18823_1014343123300001686SoilMALWFFQRTAPGSIRRIPLPSMQRFLAGEDTLPHDGDHYVRCIGMAVELRNRKPSAVHRVWFSKIRVQGNGRVDPEHRPRVVREVKSREQHGSETVIAAAHRFAERRLSTLVEWRPEEADVQALRRAVNVRAGREMI*
Ga0063454_10118559013300004081SoilMALWFFQRTAPGSIRRIPLPSMQRFLAGEDTLPHDGDHYVRCIGMAVELRNRKPSAVHRVWFSKIRVQGDGTVDPEHRPRVVREVKSREQHGSETVIAAAHRFAERRLSTLVEWRPEEADVQALRRAVNVRAGREMI*
Ga0062595_10009832133300004479SoilMALWFFQRTAPGSIRRIPLPSMQRFLAGEDTLQHDGDHYVRCIGMAVELRNRKPSAIHRVWFSKIRVRGDGHVDPEHRARVVREVKSREHHGGETIIPAAHRFAERRLSTLVEWRPEEADVQALRHAVNGRAGREMI*
Ga0066672_1018211523300005167SoilMALWFFQRTAPGNIRRIPLPAMQRFLAGERALPHDGDGYVRCIGMALELRNRKPSAVRRVWFSKIRVQGDGRVDPEHRPRVLREAAQARHGHGSVVHASHRFAERRLAHLAEWRPEEVDVQALRTAVNGRAGKEMI*
Ga0066677_1002537423300005171SoilMALWFFQRTAPGNIRRIPLPSMQRFLAGERALAHDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVRGDGRVDPEHRARVVREAGSRGHGHGAVIHAAHRFAERRLAHLAEWRPEESDLQALRSAVNGRAGKEMI*
Ga0066680_1009352513300005174SoilMALWFFHRTAPGAIRRIPLPSMQRFLAGERALPHDGDGFVRCIGMAVEVRNRKLTAVRRVWFSKIRVGGDGRVDPDHRPRALREAARRRDGHRHGPVVDAAHRFAERRLSHLVEW
Ga0066673_1000842933300005175SoilMALWFFQRTAPGSIRRIPLPSMQRFLAGEDTLQHDGDHYVRCIGMAVELRNKKPSAIHRVWFSKIRVRGDGHVDPEHRARVVREVKSREHHGSESIIPAAHRFAERRLSTLVEWRPEEADVQALRHAVNGRAGREMI*
Ga0066673_1001352633300005175SoilMALWFFQRTAPGRIRRIPLPAMQRFLAGERTLPQDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVQGDGLVDPDHRPRVLREASAAKHGHGSVVHASHRFAERRLAHLAEWRPEEADVQALRSAVNGRAGKEMI*
Ga0066679_1064867213300005176SoilMIMSRRTLWFFQRTAPGNIRRIPLPAMQRFLAGERALRHDGDGYVRCIGMALELRNRKPTAIRRVWFSKIRVQVDGRVDPEHRPRMLREAASTRHAHGSVVHASHRFAERRLAHLAEWRPEEVDVQALRIAVNGRAGKEMI*
Ga0066684_1010190123300005179SoilSMQRFLAGEYTLPHDGDHYVRCIGMAVELRNKKPSAIHRVWFSKIRVQGDGRVDPEHRARVVREVKSREHHGGETVIPAAHRFAERRLSMLVEWRPEEADVQALRHAVNGRAGREMI*
Ga0066671_1003905733300005184SoilMALWFFQRTAPGSIRRIPLPAMQRFLSGERALPHDGDGYVRCIGMALELRNRKPSAVRRVWFSKIRVQGNGRVDPEHRPRVLRDAASARHGHGSVVHASHRFAERRLAHLAEWRPEEVDVQALRIAVNGRAGKEMI*
Ga0066676_1030478923300005186SoilMALWFFQRTAPGDIRRIPLPSMQRFLAGERALRHDGDGYVRCIGMALELRNRKPSAVRRVWFSKIRVGGDGRVDPEHRARVVREAGARQHGHGRVVQAAHRFAERRLAHLAEWRPEESDLQALRNAVNGRAGKEMI*
Ga0066676_1083700613300005186SoilEARRRMALWFFQRTAPGSIRRIPLPSMQRFLAGEETLPHDGDHYVRCIGMAVELRKRKPSAVHRVWFSKIRVQGDGRVDPEHRPRVVREVKSREQHGSDTVVAAAHRFAERRLSTLVEWRPEEADVQALRRAVNVRAGREMI*
Ga0066675_1064588313300005187SoilFQRTAPGRIRRIPLPAMQRFLAGERTLPQDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVQGDGLVDPDHRPRVLREASAAKHGHGSVVHASHRFAERRLAHLAEWRPEEADVQALRSAVNGRAGKEMI*
Ga0066675_1075097113300005187SoilMALWFFQRTAPGNIRRIPLPSMQRFLAGERALAHDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVRGDGRVDPEHRARVAREAGSRGHGHGAVVHAAHRFAERRLAHLAEWRPEESDLQALRSAVNGRAGKEMI*
Ga0066675_1125544513300005187SoilMALWFFQRTAPGSIRRIPLPSMQRFLAGEYTLPHDGDHYVRCIGMAVELRNKKPSAIHRVWFSKIRVQGDGRVDPEHRARVVREVKSREHHGGETVIPAAHRFAERRLSMLVEWR
Ga0066687_1002538123300005454SoilMALWFFQRTAPGSIRRIPLPAMQRFLSGERALPHDGDGYVRCIGMALELRNRKPSAVRRVWFSKIRVQGNGRVDPEHRPRVLREAASARHGHGPVVHASHRFAERRLAHLAEWRPEEVDVQALRIAVNGRAGKEMI*
Ga0070741_1147385023300005529Surface SoilLPSMQKFLAGESTLPQDGDGFVRCIGMAVELRNRKPSAVQRVWFSKIRVRADGRVDPEHRPSTIREAVQADRAPSPTVVAAAHRFAERRLSHLGEWHPEEADVQALRSVVNARAGKEMI*
Ga0066697_1070937113300005540SoilMALWFFQRTAPGNIRRIPLPAMQRFLAGERALPHDGDGYVRCIGMALEVRNRKPSAIRRVWFSKIRVQSDGRVDPEHRRRVLREASSPKHGHGSVVHASHRFAERRLAHLAEWRPEEADVQALRTAVNGRAGKEMI*
Ga0066701_1000179683300005552SoilMALWFFQRTAPGNIRRIPLPSMQRFLAGERALAHDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVRGDGRVDPEHRARVAREAGSRGHGHGAVIHAAHRFAERRLAHLAEWRPEESDLQALRSAVNGRAGKEMI*
Ga0066701_1050372823300005552SoilMALWFFHRTAPGAIRRIPLPSMQRFLAGERALPHDGDGFVRCIGMAVEVRNRKLTAVRRVWFSKIRVGGDGRVDPDHRPRALREAARRRDGHRHGPVVDAAHRFAERRLSHLVEWQPEESDLQALRIAVNGRAGKEMI*
Ga0066704_1018752323300005557SoilVALWFFQRTAPGNIRRIPLPAMQRFLAGERALRHDGDGYVRCIGMALELRNRKPTAIRRVWFSKIRVQVDGRVDPEHRPRVLREAASARHAHGSVVHASHRFAERRLAHLAEWRPEEVDVQALRIAVNGRAGKEMI*
Ga0066704_1032482723300005557SoilMALWFFQRTAPGTIRRIPLPSMQRFLAGERALPHDGDGFVRCIGMAVEVRNRKLTAVRRVWFSKIRVRGDGRVDPEHRPRVLREAVARRDGHRHGAVVDAAHRFAERQLLHLVEWRPEEADVRALRLAVNGRAGKEMI*
Ga0066704_1048636213300005557SoilMALWFFQRTAPGNIRRIPLPAMQRFLAGERALPHDGDGYVRCIGMALELRNRKPSAVRRVWFSKIRVQGDGRVDPEHRPRVLREAAQARHGHGSVVHASHRFAERRLAHLAEWRPEEVDVQALRTAVNGRAGKKMI*
Ga0066700_1020364713300005559SoilAGERALPHDGDGYVRCIGMALELRNRKPSAIRRVWFSKIRVQGDGRVDPEHRPSVLREAASARHGHGSVVHASHRFAERRLAHLADWRPEEVDVQALRTAVNGRAGKEMI*
Ga0066670_1009842433300005560SoilMALWFFQRTAPGRIRRIPLPAMQRFLAGERTLPQDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVQGDGLVDPDHRTRVLREASAAKHGHGSVVHASHRFAERRLAHLAEWRPEEADVQALRSAVNGRAGKEMI*
Ga0066699_1065421613300005561SoilRRMALWFFQRTAPGSIRRIPLPSMQRFLAGEDTLQHDGDHYVRCIGMAVELRNKKPSAIHRVWFSKIRVRGDGHVDPEHRARVVREVKSREHHGSESIIPAAHRFAERRLSTLVEWRPEEADVQALRHAVNGRAGREMI*
Ga0066702_1045027313300005575SoilMALWFFQRTAPGTIRRVPLPSMQRFLAGESALAHDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVRGDGHVDPEHRPRMLREAGSRGHGHGSVVHAAHRFAERRLAHLAEWRPEESDLQALRHAVNGLAGKEMI*
Ga0066696_10001434113300006032SoilIPLPAMQRFLAGERTLPQDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVQGDGLVDPDHRPRVLREASAAKHGHGSVVHASHRFAERRLAHLAEWRPEEADVQALRSAVNGRAGKEMI
Ga0066696_1000680333300006032SoilMALWFFQRTAPGSIHRIPLPSMQRFLAGEDTLKHDGDHYVRCIGMAVELRNKKPSAVHRVWFSKIRVRGDGHVDPEHRASVVRELKSRENHGSETIIPAAHRFAERRLSTLVEWRPEEADVQALRHAVNGRAGREMI*
Ga0066696_1022686923300006032SoilMALWFFQRTAPGSIRRIPLPSMQRFLAGEYTLPHDGDHYVRCIGMAVELRNKKPSAIHRVWFSKIRVQGDGRVDPEHRARVVREVKSREHHGGETVIPAAHRFAERRLSMLVEWRPEEADVQALRHAVNGRAGREMI*
Ga0066696_1053785123300006032SoilMALWFFQRTAPGTIRRIPLPSMQRFLAGERALPHDGDGFVRCIGMAVEVRNRKLTAVRRVWFSKIRVRGDGRVDPEHRPRVLREAVARRDGHRRGAVVDAAHRFAERQLLHLVEWRPEEADVRALRLAVNGRAGKEMI*
Ga0075417_1005003933300006049Populus RhizosphereMALWFFQRTGPGHIRRIPLPSMQRFLAGESSLPHDGDGYVRCIGMAVELRNRKPSAVRTVWFSKIRVRGDGRVDPEHRPRILREASARHRASGSVVHAAHRFAERRLAHLAEWQPEESDIKALRSAVNVRAGKEMM*
Ga0070716_10172988413300006173Corn, Switchgrass And Miscanthus RhizosphereMALWFFQRTAPGSIRRIPLPSMQRFLAGEETLQHDGDHYVRCIGMAVELRNRKPSAVHRVWFSKIRVQGDGRVDPEHRPRVVREVKSRELHGSETVIAAAHRFAERRLSTLVEWRPEEADVQALRRAV
Ga0066659_1156902223300006797SoilMALWFFQRTAPGNIRRIPLPAMQRFLAGERALPHDGDGYVRCIGMALELRNRKPSAIRRVWFSKIRVQGDGRVDPEHRPSVLREAASARHGHGSVVHASHRFAERRLAHLADWRPEE
Ga0066660_1067399013300006800SoilRRTFREIRPGAKRSSSDKGHHDERGARVFRDNRSVEGGRVALWFFQRTAPGNIRRIPLPAMQRFLAGERALRHDGDGYVRCIGMALELRNRKPTAIRRVWFSKIRVQVDGRVDPEHRPRVLREAASARHAHGSVVHASHRFAERRLAHLAEWRPEEVDVQALRIAVNGRAGKEMI*
Ga0075421_10043095323300006845Populus RhizosphereMALWFFQRTAPGTIRRIPLPSMQRFLAGERALAHDGDGYVRCIGMALELRNRKPSAVRRVWFSKIRVRGDGRVDPEHRPRVLREIGSRGHGHGPVVHAAHRFAERRLAHLAEWRPEESDLQALRHAVNGRAGKEMI*
Ga0075433_1021408513300006852Populus RhizosphereMALWFFQRTGPGHIRRIPLPSMQRFLAGESSLPHDGDGYVRCIGMAVELRNRKPSAVRTVWFSKIRVRGDGRVDPEHRPRILREASARHRASGSVVHAAHRFAERRLAHLAEW
Ga0075419_1084137423300006969Populus RhizosphereMALWFFQRTGPGHIRRIPLPSMQRFLAGESSLPHDGDGYVRCIGMAVELRNRKPSAVCTVWFSKIRVRGDGRVDPEHRPRILREASARHRASGSVVHAAHRFAERRLAHLAEWQPEESDIKALRSAVNVRAGKEMM*
Ga0099793_1009377813300007258Vadose Zone SoilMALWFFQRTAPGNLCRIPLPSMQRFLAGESALADDGDGYVRCIGMAVELRGRKPSAVRRVWFSKIRVSGDGRVDPEHRPRALREAGAKGHRHGPVVHAGHRFAERRLAHLAEWRPEESDLQALRIAVNGRAGKEMI*
Ga0099793_1040558123300007258Vadose Zone SoilFLTGERALAGDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVRGDGRVDPEHRPRVLREIGSRGHGHGSVVHAAHRFAERRLAQLAEWRPEESDLQALRYAVNGRAGKEMI*
Ga0066710_10239585923300009012Grasslands SoilMPLWFFQRTAPGNIRRIPLPAMQRFLAGERALPHDGDGYIRCIGMALEVRNRKPSAIRRVWFSKIRVQSDGRVDPEHRRRVLREASSPKHGHGSVVHASHRFAERRLAHLAEWRPEEADVQALRTAVNGRAGKEMI
Ga0099829_1000978953300009038Vadose Zone SoilMALWFFQRTAPGNIRRIPLPSMQRFLAGERSLAHDGDGYVRCIGMAVELRNRKPCAVRRVWFSKIRVRGDGRVDPEHRPRVLRESFARLHGHGPVVHAAHRFAERRLAHLAEWRPEESDLQALRSAVNGRAGKEMI*
Ga0099830_1000734953300009088Vadose Zone SoilMALWFFQRTAPGNIRRIPLPSMQRFLAGERALAHDGDGYVRCIGMAVELRNRKPCAVRRVWFSKIRVRGDGRVDPEHRPRVLRESFARLHGHGPVVHAAHRFAERRLAHLAEWRPEESDLQALRSAVNGRAGKEMI*
Ga0099828_1062829823300009089Vadose Zone SoilLAGERALAHDGDGYVRCIGMAVELRNRKPCAVRRVWFSKIRVRGDGRVDPEHRPRVLRESVARHHGHGAVVPAAHRFAERRLAHLAEWRPEESDLQALRSAVNGRAGKEMI*
Ga0066709_10102306923300009137Grasslands SoilMALWFFQRTAPGNIRRIPLPAMQRFLAGERALSHDGDGYVRCIGMALELRNRKPSAVRRVWFSKIRVQGDGRVDPEHRPRVLREAAQARHGHGSVVHASHRFAERRLAHLAEWRPEEVDVQALRTAVNGRAGKEMI*
Ga0066709_10289947413300009137Grasslands SoilMALWFFQRTAPGNIRRIPLPAMQRFLAGERALPHDGDGYVRCIGMALEVRNRKPSAIRRVWFSKIRVQGDGRVDPEHRRRVLREASSPKHGHGSVVHASHRFAERRLAHLAEWRPEEADVQALRTVVNGRAGKEMI*
Ga0099792_1017672323300009143Vadose Zone SoilMALWFFQRTAPGTIRRIPLPSMQRFLTGERALAGDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVSSDGRVDPEHRPRVLRDIGSRGRGHGSVVHAAHRFAERRLAHLAEWRPEESDLQALRHAVNGRAGKEMI*
Ga0099792_1092532113300009143Vadose Zone SoilMALWFFQRTAPGSIRRIPLPSMQRFLAGEDTLQHDGDHYVRCIGMAVELRNKKPSAIHRVWFSKIRVRGDGHVDPEHRARVVREVKSREHHGGETVIPAAHLFAERRLSTLVEWRPEEADVQALRH
Ga0114129_1073791323300009147Populus RhizosphereMALWFFQRTAPGTIRRIPLPSMQRFLAGERALAHDGDGYVRCIGMALELRNRKPSAVRGVWFSKIRVRGDGRVDPEHRPRVLREIGSRGHGHGPVVHAAHRFAERRLAHLAEWRPEESDLQALRHAVNGRAGKEMI*
Ga0114129_1255476213300009147Populus RhizosphereVEGGRMALWFFQRTAPGNIRRIPLPAMQRFLAGERALPHDGDGYVRCIGMALELRNRKPSAVRRVWFSKIRVRGDGRVDPEHRPRVLREAAAARGGHGSVVHAAHRFAERLLAHLAEWLPEEVDVRALRIAVNGRAGKEMI*
Ga0075423_1001190613300009162Populus RhizosphereIPLPSMQRFLAGESSLPHDGDGYVRCIGMAVELRNRKPSAVRTVWFSKIRVRGDGRVDPEHRPRILREASARHRASGSVVHAAHRFAERRLAHLAEWQPEESDIKALRSAVNVRAGKEMM
Ga0099796_1010534323300010159Vadose Zone SoilMALWFFQRTAPGSIRRIPLPSMQRFLAGESALAHDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVSSDGRVDPEHRPRVLRDIGSRGRGHGSVVHAAHRFAERRLAHLAEWRPEESDLQALRHAVNGRAGKEMI*
Ga0134067_1007636513300010321Grasslands SoilMALWFFQRTAPGSIRRIPLPSMQRFLAGEDTLQHDGDHYVRCIGMAVELRNKKPSAIHRVWFSKIRVRGDGHVDPEHRARVVREVKSREHHGSESIIPAAHRFAERRLSTLVEWRPEEADVQALRHAVNGRAGREM
Ga0126372_1055828113300010360Tropical Forest SoilLWFFQRTAPGDIQRIPLPSMQRFLAGERALQHDGDGYVRCIGMAVELRNRKPCAVRRVWFSKIRVGGDGRVDPEHRARVAREAGTRGHGHGSVVQAAHRFAARRLAHLAEWRPEESDLKALRTAVNGRAGKEMI*
Ga0126372_1288896013300010360Tropical Forest SoilMALWFFQRTAPGDIRRIPLPSMQRFLAGERALPDDGDGYVRCIGMAVELRNRKPAAVRRVWFSKIRVGGDGRVDPEHRARVVREAGTRHHGHGPVVQAAHRFAERRLAHLAEWRPEESDLQALRNAVNGRAGKEMI*
Ga0137380_1000124753300012206Vadose Zone SoilMALWFFQRTSPGNIRRIPLPSMRRFLAGERALAQDGDGYVRCIGMAVELRNRKPCAVRRVWFSKIRVRGDGRVDPEHRPRVLRESFARHHGHGPVVHAAHRFAERRLAHLAEWRPEESDLQALRSAVNGRAGKEMI*
Ga0150985_10081652613300012212Avena Fatua RhizosphereMALWFFQRTAPGSIRRIPLPSMQRFLAGEDTLPHDGDHYVRCIGMAVELRNRKPSAVHRVWFSKIRVQGDGKVDPEHRPRVVREVKSREQHGSETVIAAAHRFAERRLSTLVEWRPEEADVQALRRAVNVRAGREMI*
Ga0150985_10662394923300012212Avena Fatua RhizosphereMALWFFQRTAPGSIRRIPLPSMQRFLAGEDSLQHDGDHYVRCIGMAVELRNKKPSAIHRVWFSKIRVRGDGHVDPEHRARVVREVKSREHHGGETIIAAAHRFAERRLSTLVEWRPEEADVQALRHAVNGRAGREMI*
Ga0150985_11412642313300012212Avena Fatua RhizosphereMALWFFQRTAPGSIRRIPLPSMQRFLAGEDTLAHDGDHYVRCIGMAVELRNRKPSAVHRVWFSKIRVQGDGRVDPEHRPRVVREVESREQHGSKTVIAAAHRFAERRLSTLVEWRPEEADVQALRRAVNVRAGREMI*
Ga0137384_1057728613300012357Vadose Zone SoilMALWFFQRTSPGNIRRIPLPSMRRFLAGERALAQDGDGYVRCIGMAVELRNRKPCAVRRVWFSKIRVRGDGRVDPEHRPRVLRESFARHHGHGPVVHAAHRFAERRLAHLGEWRPEESDLQALRSAVNGRAGKEMI*
Ga0150984_10756760123300012469Avena Fatua RhizosphereAGEDTLPHDGDHYVRCIGMAVELRNRKPSAVHRVWFSKIRVQGDGTVDPEHRPRVVREVKSREQHGSETVIAAAHRFAERRLSTLVEWRPEEADVQALRRAVNVRAGREMI*
Ga0150984_11867292223300012469Avena Fatua RhizosphereMALWFFQRTAPGSIRRIPLPSMQRFLAGEDTLPHDGDHYVRCIGMAVELRNRKPSAVHRVWFSKIRVQGNGRVDPEHRPRVVREVKSREQHGSETVIAAAHRFAERRLSTLV
Ga0137398_1007625123300012683Vadose Zone SoilMALWFFQRTAPGSIRRIPLPSMQRFLAGEDTLQHYGDHDVGCIGMAVELRNKKPSAIHRVWFSKIRVRGDGHVDPEHRARVVREVKSREQHGGETVIPAAHLFAERRLSTLVEWRPEEADVQALRHAVNGRAGREMI*
Ga0137396_1002255623300012918Vadose Zone SoilMALWFFQRTAPGTIRRIPLPSMQRFLTGERALAGDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVRGDGRVDPEHRPRVLREIGSRGHGHGSVVHAAHRFAERRLAQLAEWRPEESDLQALRYAVNGRAGKEMI*
Ga0137419_1081470513300012925Vadose Zone SoilMALWFFQRTAPGNLCRIPLPSMQRFLAGESALADDGDGYVRCIGMAVELRGRKPSAVRRVWFSKIRVSGDGRVDPDHRPRALREAGAKGHGHGPVVHAGHRFAERRLAHLAEWRPEESDLQALRIAVNGRAGKEMI*
Ga0137407_1008352223300012930Vadose Zone SoilMALWFFQRTAPGMIRRIPLPSMQRFLAGERALAHDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVRGDGRVDPEHRPRVLREAGSRGHRHGPVVHAVHRFAERRLAHLAEWRPEESDLRALRHAVNGRAGKEMI*
Ga0134087_1070509613300012977Grasslands SoilMALWFFQRTAPGDIRRIPLPSMQRFLAGERALAHDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVRGDGRVDPEHRARVVREAGSRGHGHGAVIHAAHRFAERRLAHLAEWRPEESDLQALRNAVNGRAGKEMI*
Ga0137418_1071071423300015241Vadose Zone SoilGNMALWFFQRTAPGNLCRIPLPSMQRFLAGESALADDGDGYVRCIGMAVELRGRKPSAVRRVWFSKIRVSGDGRVDPEHRPRALREAGAKGHRHGPVVHAGHRFAERRLAHLAEWRPEESDLQALRIAVNGRAGKEMI*
Ga0066655_1007955523300018431Grasslands SoilMALWFFHRTAPGSIRRIPLPSMQRFLAGEDTLQHDGDHYVRCIGMAVELRNKKPSAIHRVWFSKIRVRGDGHVDPEHRARVVREVTSREHHGSETIIGAAHRFAERRLSTLVEWRPEEADVQALRHAVNGRAGREMI
Ga0066655_1054828713300018431Grasslands SoilMALWFFQRTAPGSIRRIPLPSMQRFLAGEDTLQHDGDHYVRCIGMAVELRNKKPSAIHRMWFSKIRVRGDGRVDPEHRARVVRELKSRESAANGTVVPAAHRFAERRLSTLVEWRPEEADVEALRHAVNGRAGREMI
Ga0066667_1007215923300018433Grasslands SoilMALWFFQRTAPGNIRRIPLPSMQRFLAGERALAHDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVRGDGRVDPEHRARVVREAGSRGHGHGAVIHAAHRFAERRLAHLAEWRPEESDLQALRSAVNGRAGKEMI
Ga0066662_1004063433300018468Grasslands SoilMALWFFQRTAPGSIRRIPLPSMQRFLAGEDTLQHDGDHYVRCIGMAVELRNKKPSAIHRVWFSKIRVRGDGHVDPEHRARVVREVKSREHHGSESIIPAAHRFAERRLSTLVEWRPEEADVQALRHAVNGRAGREMI
Ga0179596_1016457223300021086Vadose Zone SoilMALWFFQRTAPGDLRRIPLPSMQRFLAGERGLPHDGDGYVRCIGMALEVRNRKPCAVRRVWFSKIRVGGDGRVDPEHRPRVVREAGTHRHGHGSVVQAAHRFAERRLAHLAEWRPEESDLQALRSAVNGRAGKEMI
Ga0179596_1047038323300021086Vadose Zone SoilMALWFFQRTAPGNIRRIPLPSMQRFLAGERALAHDGDGYVRCIGMAVELRNRKPCAVRRVWFSKIRVRGDGRVDPEHRPRVLRESFARHHGHGPVVHAAHRFAERRLAHLAEWRPEESDLQALRSAVNGRAGKEMI
Ga0137417_108155723300024330Vadose Zone SoilMALWFFQRTAPGNLCRIPLPSMQRFLAGESALADDGDGYVRCIGMAVELRGRKPSAVRRVWFSKIRVSGDGRVDPEHRPRALREAGAKGHRHGPVVHAGHRFAERRLAHLAEWRPEESDLQALRIAVNGRAGKEMI
Ga0207665_1010644323300025939Corn, Switchgrass And Miscanthus RhizosphereMALWFFQRTAPGSIRRIPLPSMQRFLAGEDTLQHDGDHYVRCIGMAVELRNRKPSAIHRVWFSKIRVRGDGHVDPEHRARVVREVKSREHHGGETIIPAAHRFAERRLSTLVEWAGALGYELALRPKE
Ga0207665_1145885613300025939Corn, Switchgrass And Miscanthus RhizosphereMALWFFQRTAPGSIRRIPLPSMQRFLAGEETLQHDGDHYVRCIGMAVELRNRKPSAVHRVWFSKIRVQGDGRVDPEHRPRVVREVKSRELHGSETVIAAAHRFAERRLSTLVEWRPE
Ga0209027_102458323300026300Grasslands SoilMALWFFQRTAPGTIRRMPLPAMQRFLAGESALAHDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVRGDGHVDPEHRPRMLREAGSRGHGHGSVVHAAHRFAERRLAHLAEWRPEESDLQALRHAVNGLAGKEMI
Ga0209238_101909523300026301Grasslands SoilMALWFFQRTAPGAIRRIPLPSMQRFLAGEYTLQHDGDHYVRCIGMAVELRNRKPSAIHRVWFSKIRVAGDGHVDPEHRARVVRELKSREHHGSETVIPAAHRFAERRLSTLVEWRPEEADVQALRHAVNGRAGREMI
Ga0209239_135728813300026310Grasslands SoilALWFFQRTAPGSIRRIPLPSMQRFLAGEDTLQHDGDHYVRCIGMAVELRNKKPSAIHRVWFSKIRVRGDGHVDPEHRARVVREVKSREHHGSESIIPAAHRFAERRLSTLVEWRPEEADVQALRHAVNGRAGREMI
Ga0209153_108277723300026312SoilMALWFFQRTAPGRIRRIPLPAMQRFLAGERTLPQDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVQGDGLVDPDHRPRVLREASAAKHGHGSVVHASHRFAERRLAHLAEWRPEEADVQALRSAVNGRAGKEMI
Ga0209801_110462013300026326SoilLAGERALAHDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVRGDGRVDPEHRARVVREAGSRGHGHGAVIHAAHRFAERRLAHLAEWRPEESDLQALRSAVNGRAGKEMI
Ga0209804_128600323300026335SoilMALWFFQRTAPGNIRRIPLPAMQRFLAGERALPHDGDGYVRCIGMALELRNRKPSAVRRVWFSKIRVQGDGRVDPEHRPRVLREAAQARHGHGSVVHASHRFAERRLAHLAEWRPEEVDVQALRTAVNGRAGKEMI
Ga0209690_100751463300026524SoilMALWFFQRTAPGNIRRIPLPSMQRFLAGERALAHDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVRGDGRVDPEHRARVAREAGSRGHGHGAVIHAAHRFAERRLAHLAEWRPEESDLQALRSAVNGRAGKEMI
Ga0209058_111227723300026536SoilMQRFLAGERALAHDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVRGDGRVDPEHRARVVREAGSRGHGHGAVIHAAHRFAERRLAHLAEWRPEESDLQALRSAVNGRAGKEMI
Ga0209805_102525423300026542SoilMALWFFQRTAPGTIRRIPLPSMQRFLAGERALPHDGDGFVRCIGMAVEVRNRKLTAVRRVWFSKIRVRGDGRVDPEHRPRVLREAVARRDGHRRGAVVDAAHRFAERQLLHLVEWRPEEADVRALRLAVNGRAGKEMI
Ga0209805_114664213300026542SoilGTIRRMPLPAMQRFLAGESALAHDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVRGDGHVDPEHRPRMLREAGSRGHGHGSVVHAAHRFAERRLAHLAEWRPEESDLQALRHAVNGLAGKEMI
Ga0209156_1047351213300026547SoilMALWFFQRTAPGNIRRIPLPSMQRFLAGERALAHDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVRGDGRVDPEHRARVVREAGSRGHGHGAVIHAAHRFAERRLAHLAEWRPEESDLQALRSAVNGRAG
Ga0209474_1003345223300026550SoilMALWFFQRTAPGSIHRIPLPSMQRFLAGEDTLKHDGDHYVRCIGMAVELRNKKPSAVHRVWFSKIRVRGDGHVDPEHRASVVRELKSRENHGSETIIPAAHRFAERRLSTLVEWRPEEADVQALRHAVNGRAGREMI
Ga0209474_1017402923300026550SoilLPAMQRFLAGESALAHDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVRGDGHVDPEHRPRMLREAGSRGHGHGSVVHAAHRFAERRLAHLAEWRPEESDLQALRHAVNGLAGKEMI
Ga0209474_1022023323300026550SoilMALWFFQRTAPGSIRRIPLPEMQRFLSGERALPHDGDGYVRCIGMALELRNRKPSAVRRVWFSKIRVQGAGRVDPEHRPRVLREAASARHGHGPVVHASHRFAERRLAHLAEWRPEEVDVQALRIAVNGRAGKEMI
Ga0209577_1006076433300026552SoilMALWFFQRTAPGNIRRIPLPSMQRFLAGERALAHDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVRGDGRVDPEHRARVVREAGSRGHGHGAVIHAAHRFAERRLAHLAE
Ga0209577_1027316133300026552SoilMALWFFQRTAPGTIRRIPLPSMQRFLAGERALPHDGDGFVRCIGMAVEVRNRKLTAVRRVWFSKIRVRGDGRVDPEHRPRVLREAVARRDGHRHGAVVDAAHRFAERQLLHLVEWRPEEADVRALRLAVNGRAGKEMI
Ga0209588_105481223300027671Vadose Zone SoilMALWFFQRTAPGNIQRIPLPSMQRFLAGERAFADDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVGGDGRVDPEHRPRVLREAGSRPHGHGSVVHAGHRFAERRLAHLAEWRPEESDLQALRSAVNGRAGKEMI
Ga0209689_134593423300027748SoilAMQRFLAGERALPHDGDGYVRCIGMALELRNRKPSAIRRVWFSKIRVQGDGRVDPEHRPSVLREAASARHGHGSVVHASHRFAERRLAHLADWRPEEVDVQALRTAVNGRAGKEMI
Ga0209180_1001784123300027846Vadose Zone SoilMALWFFQRTAPGNIRRIPLPSMQRFLAGERALAHDGDGYVRCIGMAVELRNRKPCAVRRVWFSKIRVRGDGRVDPEHRPRVLRESFARLHGHGPVVHAAHRFAERRLAHLAEWRPEESDLQALRSAVNGRAGKEMI
Ga0209488_1002275643300027903Vadose Zone SoilMALWFFQRTAPGTIRRIPLPSMQRFLTGERALAGDGDGYVRCIGMAVELRNRRPSAVRRVWFSKIRVSSDGRVDPEHRPRVLRDIGSRGRGHGSVVHAAHRFAERRLAHLAEWRPEESDLQALRHAVNGRAGKEMI
Ga0209488_1003031023300027903Vadose Zone SoilMALWFFQRTAPGNLCRIPLPSMQRFLAGESALADDGDGYVRCIGMAVELRGRKPSAVRRVWFSKIRVSGDGRVDPEHRPRALREAGAKGHGHGPVVHAGHRFAERRLAHLAEWRPEESDLQALRIAVNGRAGKEMI
Ga0209488_1054363023300027903Vadose Zone SoilMALWFFQRTAPGSIRRIPLPSMQRFLAGEDTLQHDGDHYVRCIGMAVELRNKKPSAIHRVWFSKIRVRGDGHVDPEHRARVVREVKSREHHGGETVIPAAHLFAERRLSTLVEWRPEEADVQALRHAVNGRAGRE
Ga0209488_1113097813300027903Vadose Zone SoilMALWFFQRTAPGTIRRIPLPSMQRFLAGERALAHDGDGYVRCIGMAVELRNRKPSAVRRVWFSKIRVRGDGRVDPEHRPRVLREAGARGHGHGAVVHAAHRFAERRLAHLAEWRPEESDLRALRHAVNGRAGKEMI
Ga0209382_1045713223300027909Populus RhizosphereMALWFFQRTAPGTIRRIPLPSMQRFLAGERALAHDGDGYVRCIGMALELRNRKPSAVRRVWFSKIRVRGDGRVDPEHRPRVLREIGSRGHGHGPVVHAAHRFAERRLAHLAEWRPEESDLQALRHAVNGRAGKEMI
Ga0137415_1031921613300028536Vadose Zone SoilMALWFFQRTAPGNIRRIPLPSMQRFLAGERALAHDGDGYVRCIGMAVEVRNRKPSAVRRVWFSKIRVGGDGRVDPEHRPRVLREVGSRHHGRGSVVHAAHRFAERRLAHLAEWRPEESDLQALRSAVNGRAGKEMI
Ga0307308_1056902813300028884SoilGSMALWFFQRTAPGNIRRIPLPSMQRFLAGERALEHDGDGYVRCIGMAVELRNRKPAAVRRVWFSKIRVGSDGRVDPEHRPRILREATGAGHRGHGPVVQAAHRFAERRLAHLAEWRPEESDLQALRHAVNGRAGKEMI
Ga0307471_10028346723300032180Hardwood Forest SoilMALWFFQRTAPGALRRIPLPSMQRFLAGERPLPHDGDGYVRCIGMAVELRNRKPCAVRRVWFSKIRVGGDGRVDPEHRARVVREVGTRHHGQGPVVQAAHRFAERRLAHLAEWRPEESDLQALRSAVNGRAGKEMI
Ga0372943_0856076_249_5993300034268SoilMQRFLAGEDTLQHDGDHYVRCIGMAVELRNKKPSAIHRVWFSKIRVGGDGHVDPEHRARVVREMKSREHHGGETVIPAAHLFAERRLSTLVEWRPEEADVQALRHAVNGRAGREMI


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.