Metagenome / Metatranscriptome Family F092399

Basic Information
Family ID	F092399
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	51 residues
Representative Sequence	MTFWLFSGWFQKSGAEIWSSVLASFCFWAGASKIPPHGQGLVAEGLVGAF
Number of Associated Samples	92
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	22.64 %
% of genes near scaffold ends (potentially truncated)	39.25 %
% of genes from short scaffolds (< 2000 bps)	78.50 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Most Common Taxonomy
Group	Bacteria (85.047 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (18.692 % of family members)
Environment Ontology (ENVO)	Unclassified (28.972 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (30.841 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.79% β-sheet: 0.00% Coil/Unstructured: 78.21%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF03462	PCRF	32.71
PF00149	Metallophos	23.36
PF12850	Metallophos_2	2.80
PF13561	adh_short_C2	1.87
PF16357	PepSY_TM_like_2	1.87
PF01300	Sua5_yciO_yrdC	1.87
PF15902	Sortilin-Vps10	0.93
PF01915	Glyco_hydro_3_C	0.93
PF02403	Seryl_tRNA_N	0.93
PF00437	T2SSE	0.93
PF03065	Glyco_hydro_57	0.93
PF01261	AP_endonuc_2	0.93
PF13460	NAD_binding_10	0.93
PF14582	Metallophos_3	0.93
PF13189	Cytidylate_kin2	0.93
PF00392	GntR	0.93
PF03481	Sua5_C	0.93
PF01042	Ribonuc_L-PSP	0.93
PF05593	RHS_repeat	0.93
PF13432	TPR_16	0.93
PF04255	DUF433	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	32.71
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	32.71
COG0172	Seryl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.93
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.93
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.93
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.93
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.05 %
Unclassified	root	N/A	14.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.05 %
Unclassified	root	N/A	14.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.05 %
Unclassified	root	N/A	14.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.62 %
Unclassified	root	N/A	14.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.80 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	2.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	31.78 %
Unclassified	root	N/A	14.95 %
bacterium HR26	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR26	2.80 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	27.10 %
Unclassified	root	N/A	14.95 %
bacterium HR26	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR26	2.80 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	1.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.87 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.87 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.93 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	24.30 %
Unclassified	root	N/A	14.95 %
bacterium HR26	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR26	2.80 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1.87 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.87 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.87 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	21.50 %
Unclassified	root	N/A	14.95 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	2.80 %
bacterium HR26	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR26	2.80 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	1.87 %
Craurococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Craurococcus	1.87 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %
Klebsiella/Raoultella group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group	0.93 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.93 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.93 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	20.56 %
Unclassified	root	N/A	14.95 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	2.80 %
bacterium HR26	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR26	2.80 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Craurococcus → environmental samples	1.87 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1.87 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.93 %
Klebsiella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella	0.93 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.93 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	20.56 %
Unclassified	root	N/A	14.95 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	2.80 %
bacterium HR26	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR26	2.80 %
uncultured Craurococcus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Craurococcus → environmental samples → uncultured Craurococcus sp.	1.87 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1.87 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %
Klebsiella pneumoniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	0.93 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.93 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.93 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	20.56 %
Unclassified	root	N/A	14.95 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	2.80 %
bacterium HR26	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR26	2.80 %
uncultured Craurococcus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Craurococcus → environmental samples → uncultured Craurococcus sp.	1.87 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1.87 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %
Klebsiella pneumoniae subsp. pneumoniae	subspecies	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae → Klebsiella pneumoniae subsp. pneumoniae	0.93 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.93 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.93 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	20.56 %
Unclassified	root	N/A	14.95 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	2.80 %
bacterium HR26	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR26	2.80 %
uncultured Craurococcus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Craurococcus → environmental samples → uncultured Craurococcus sp.	1.87 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1.87 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %
Klebsiella pneumoniae subsp. pneumoniae DSM 30104 = JCM 1662 = NBRC 14940	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae → Klebsiella pneumoniae subsp. pneumoniae → Klebsiella pneumoniae subsp. pneumoniae DSM 30104 = JCM 1662 = NBRC 14940	0.93 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.93 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.93 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c1822141	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300004114\|Ga0062593_100908209	All Organisms → cellular organisms → Bacteria → Acidobacteria	891	Open in IMG/M
3300005186\|Ga0066676_10699503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Craurococcus → environmental samples → uncultured Craurococcus sp.	690	Open in IMG/M
3300005329\|Ga0070683_102302681	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	517	Open in IMG/M
3300005334\|Ga0068869_100916458	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300005364\|Ga0070673_102183465	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300005466\|Ga0070685_11383315	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300005534\|Ga0070735_10165078	All Organisms → cellular organisms → Bacteria → Acidobacteria	1368	Open in IMG/M
3300005534\|Ga0070735_10534907	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300005542\|Ga0070732_10616713	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300005543\|Ga0070672_101384383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Craurococcus → environmental samples → uncultured Craurococcus sp.	629	Open in IMG/M
3300005544\|Ga0070686_100523936	All Organisms → cellular organisms → Bacteria → Acidobacteria	923	Open in IMG/M
3300005544\|Ga0070686_101670175	Not Available	540	Open in IMG/M
3300005617\|Ga0068859_100543099	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1257	Open in IMG/M
3300006052\|Ga0075029_100001317	All Organisms → cellular organisms → Bacteria	14247	Open in IMG/M
3300006176\|Ga0070765_101082112	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	758	Open in IMG/M
3300006954\|Ga0079219_12376765	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300009162\|Ga0075423_11671315	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300009623\|Ga0116133_1216262	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR26	519	Open in IMG/M
3300009629\|Ga0116119_1187046	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300009632\|Ga0116102_1095094	All Organisms → cellular organisms → Bacteria → Acidobacteria	863	Open in IMG/M
3300009644\|Ga0116121_1147032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae → Klebsiella pneumoniae subsp. pneumoniae → Klebsiella pneumoniae subsp. pneumoniae DSM 30104 = JCM 1662 = NBRC 14940	744	Open in IMG/M
3300009764\|Ga0116134_1019762	Not Available	2756	Open in IMG/M
3300010043\|Ga0126380_11224495	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	648	Open in IMG/M
3300010375\|Ga0105239_12394503	Not Available	615	Open in IMG/M
3300010379\|Ga0136449_100137690	All Organisms → cellular organisms → Bacteria	4838	Open in IMG/M
3300011120\|Ga0150983_14140279	Not Available	559	Open in IMG/M
3300012212\|Ga0150985_120026109	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR26	643	Open in IMG/M
3300014161\|Ga0181529_10420372	Not Available	719	Open in IMG/M
3300014164\|Ga0181532_10484014	Not Available	680	Open in IMG/M
3300014164\|Ga0181532_10809673	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300014200\|Ga0181526_11007097	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	523	Open in IMG/M
3300014489\|Ga0182018_10011091	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	6430	Open in IMG/M
3300014492\|Ga0182013_10124650	All Organisms → cellular organisms → Bacteria → Acidobacteria	1679	Open in IMG/M
3300014495\|Ga0182015_10010066	All Organisms → cellular organisms → Bacteria	8693	Open in IMG/M
3300014501\|Ga0182024_10001081	All Organisms → cellular organisms → Bacteria → Acidobacteria	70587	Open in IMG/M
3300014502\|Ga0182021_11647592	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	773	Open in IMG/M
3300014658\|Ga0181519_10345973	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300016750\|Ga0181505_11081756	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1194	Open in IMG/M
3300017943\|Ga0187819_10682493	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300017946\|Ga0187879_10049057	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2491	Open in IMG/M
3300017988\|Ga0181520_10689559	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300018025\|Ga0187885_10249253	Not Available	812	Open in IMG/M
3300018034\|Ga0187863_10070165	All Organisms → cellular organisms → Bacteria	1980	Open in IMG/M
3300018037\|Ga0187883_10342628	All Organisms → cellular organisms → Bacteria → Acidobacteria	764	Open in IMG/M
3300018038\|Ga0187855_10004375	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	10182	Open in IMG/M
3300020215\|Ga0196963_10305902	Not Available	701	Open in IMG/M
3300020581\|Ga0210399_11212529	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300020583\|Ga0210401_10161884	All Organisms → cellular organisms → Bacteria	2089	Open in IMG/M
3300021170\|Ga0210400_11180680	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	617	Open in IMG/M
3300021445\|Ga0182009_10627004	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	577	Open in IMG/M
3300021860\|Ga0213851_1269958	All Organisms → cellular organisms → Bacteria → Acidobacteria	2538	Open in IMG/M
3300022515\|Ga0224546_1028934	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	531	Open in IMG/M
3300023068\|Ga0224554_1093769	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300023311\|Ga0256681_11443333	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3039	Open in IMG/M
3300025907\|Ga0207645_10535961	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300025930\|Ga0207701_11512076	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300025936\|Ga0207670_10294648	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1268	Open in IMG/M
3300025944\|Ga0207661_10917010	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	807	Open in IMG/M
3300025944\|Ga0207661_12135698	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	506	Open in IMG/M
3300026116\|Ga0207674_10466946	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1220	Open in IMG/M
3300027775\|Ga0209177_10360530	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300027854\|Ga0209517_10665573	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	541	Open in IMG/M
3300027898\|Ga0209067_10000924	All Organisms → cellular organisms → Bacteria	18422	Open in IMG/M
3300027905\|Ga0209415_10673134	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	748	Open in IMG/M
3300027986\|Ga0209168_10129311	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1289	Open in IMG/M
3300029989\|Ga0311365_10968064	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300029990\|Ga0311336_10272019	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300030056\|Ga0302181_10152881	Not Available	1101	Open in IMG/M
3300030294\|Ga0311349_11207647	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	706	Open in IMG/M
3300030399\|Ga0311353_10503850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1073	Open in IMG/M
3300030759\|Ga0265745_1033476	Not Available	505	Open in IMG/M
3300031525\|Ga0302326_10595989	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1645	Open in IMG/M
3300031525\|Ga0302326_11378158	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300031595\|Ga0265313_10379096	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300031681\|Ga0318572_10732073	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300031708\|Ga0310686_115500385	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300031716\|Ga0310813_10926845	Not Available	791	Open in IMG/M
3300031723\|Ga0318493_10681638	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300031798\|Ga0318523_10626278	Not Available	529	Open in IMG/M
3300031912\|Ga0306921_12664622	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR26	515	Open in IMG/M
3300031938\|Ga0308175_100189266	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2016	Open in IMG/M
3300032054\|Ga0318570_10588222	Not Available	508	Open in IMG/M
3300032059\|Ga0318533_11392992	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300032261\|Ga0306920_102575062	All Organisms → cellular organisms → Bacteria → Acidobacteria	698	Open in IMG/M
3300032770\|Ga0335085_10051983	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5532	Open in IMG/M
3300032770\|Ga0335085_10541643	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1321	Open in IMG/M
3300032770\|Ga0335085_12552221	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300032783\|Ga0335079_10000575	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	42234	Open in IMG/M
3300032783\|Ga0335079_11458552	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300032783\|Ga0335079_12061171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300032805\|Ga0335078_10052607	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	6012	Open in IMG/M
3300032805\|Ga0335078_10091550	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4409	Open in IMG/M
3300032805\|Ga0335078_10208425	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2705	Open in IMG/M
3300032805\|Ga0335078_10477936	All Organisms → cellular organisms → Bacteria → Acidobacteria	1608	Open in IMG/M
3300032805\|Ga0335078_10679260	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300032828\|Ga0335080_10104212	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3148	Open in IMG/M
3300032828\|Ga0335080_10910371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	901	Open in IMG/M
3300032892\|Ga0335081_10587505	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1377	Open in IMG/M
3300032893\|Ga0335069_11514456	Not Available	722	Open in IMG/M
3300033134\|Ga0335073_10166418	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2776	Open in IMG/M
3300033158\|Ga0335077_10747808	All Organisms → cellular organisms → Bacteria → Acidobacteria	1001	Open in IMG/M
3300033158\|Ga0335077_10980826	Not Available	844	Open in IMG/M
3300033486\|Ga0316624_10819102	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300033513\|Ga0316628_100089483	All Organisms → cellular organisms → Bacteria	3403	Open in IMG/M
3300033823\|Ga0334837_009761	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4434	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.72%
Host-Associated	Host-Associated	10.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.16%
Aquatic	Environmental → Aquatic	20.56%
Plants	Host-Associated → Plants	10.28%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.81%
Freshwater	Environmental → Aquatic → Freshwater	18.69%
Peat	Environmental → Terrestrial → Peat	9.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.67%
Sediment	Environmental → Aquatic → Sediment	1.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.10%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	23.36%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.35%
Loam	Environmental → Terrestrial → Soil → Loam	8.41%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Lake	Environmental → Aquatic → Freshwater → Lake	0.93%
Sand	Environmental → Terrestrial → Soil → Sand	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	18.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.35%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.54%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.67%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.93%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	18.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.61%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.67%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.74%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.80%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.80%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.87%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.87%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.93%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022515	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 1-5	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030759	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033823	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092399

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_18221412	3300000033	Soil	MTFWLFSGWDQKSGAAICSSVLLSFCFCAGASKIPPHGERLFAEGLVFAV*
Ga0062593_1009082092	3300004114	Soil	MIFWLFSGLFQKSGAEMRASLLASFCRCPGASKIPPHGRGLVAEGLVFAL*
Ga0066676_106995031	3300005186	Soil	MIFWLFSGLFQKSAPEMRLSLRVSFWRCAGASKIPPDGRRLVAEGLVFAL*
Ga0070683_1023026811	3300005329	Corn Rhizosphere	CITFWLFSGWLQKSGAEICSSVRLSFCFCDGASKIPPDGQRLVAERLIFAFQLF*
Ga0068869_1009164582	3300005334	Miscanthus Rhizosphere	CMIFWLFSGLFQKSGVEIRLSLWASFDRWPGASKIPPHGRRLVAEGLVFAL*
Ga0070673_1021834651	3300005364	Switchgrass Rhizosphere	MIFWLFSGLFQKSAPEMRLSLRLSFWRCAGASKIPPDGRRLVAEGLVFAL*
Ga0070685_113833151	3300005466	Switchgrass Rhizosphere	LFSGWFQKSGEAIWASLSASFFFWVGASKIPPDGKGLVAEGLKLAVEFF*
Ga0070735_101650783	3300005534	Surface Soil	MIFWLFSGWFQKSGCAICSSVWASFFFCAGASKIPPHGQSLFAEGQIFAV*
Ga0070735_105349071	3300005534	Surface Soil	QKSGCAICSSSLASFCFCAEASKIPPHGKRLFAEGQIFAF*
Ga0070732_106167132	3300005542	Surface Soil	CCITFWLFSGWLQKSGAETCSSVRASFFFWEGASKIPPHGQGLVAEGEIFAVEFFYGHGLSSNSNK*
Ga0070672_1013843831	3300005543	Miscanthus Rhizosphere	LRACITFWLFSGWFQKSGEEICSSLSANFFFCVGASKIPPHGQGLVAQRLVLTV*
Ga0070686_1005239362	3300005544	Switchgrass Rhizosphere	MIFWLFSGLFQKSGAEMRPSLWASFDRWPEASKIPPHGRRLVAEGLVFAL*
Ga0070686_1016701752	3300005544	Switchgrass Rhizosphere	CDQKSGEEICSSVWASFCFCAGASKIPPDGKRLFTEGLVFAI*
Ga0068859_1005430993	3300005617	Switchgrass Rhizosphere	GWFQKSGEAIWASLSASFFFWVGASKIPPDGKGLVAEGLKLAVEFF*
Ga0068858_1015947552	3300005842	Switchgrass Rhizosphere	QKPGAEVCSSILASFSFCVGASKIPPHGKSLFAEGLIFAFQLV*
Ga0075029_1000013177	3300006052	Watersheds	MTFWLFSGWFQKSGAEICASVSASFFFWAGASKIPPHGQGLVAEGLIFAFELF*
Ga0070765_1010821123	3300006176	Soil	MIFWLFSGWFQKPGAAVCSSVCWSLDFSAGASKIPPDSQGLFAEGGIPAF*
Ga0079219_123767652	3300006954	Agricultural Soil	MSFWLFSGCDQKSGDPIFSSSLFSLDFCAETSKIPPHGERLFAEGKVFAF*
Ga0075423_116713152	3300009162	Populus Rhizosphere	IFWLFSGLFQKSGAEMSASLCASFCFCAGASKIPPHGRRLVAEGLVFAL*
Ga0116133_12162621	3300009623	Peatland	MTFWLFSGLFQKSGEEICSSVFASFCFCAGESKIPPHGQGLGAEGLVGAF*
Ga0116119_11870462	3300009629	Peatland	SGWFQKSGEEICASVSVSFCFCAGASKIPPHGQGLVAEGLIRAF*
Ga0116102_10950941	3300009632	Peatland	SRITFWLFSGWVQKSAAAICCSVWASFCFCAGASKIPPDGQSLVAEGQVFAV*
Ga0116121_11470322	3300009644	Peatland	MIFWLFSGWFQKPGAAVCSSVCWSLDFSAGASKIPPHSQGLFAEGDVLAF*
Ga0116134_10197623	3300009764	Peatland	MIFWLFSGWFQKPGALVCSSTFCSLDFCAGASKIPPHGERLFAEGRVLSF*
Ga0126380_112244952	3300010043	Tropical Forest Soil	MTFWLFSGCDQKSAAAICSSSLFSLDFCPEASKIPPHGERLFAEGKVFAF*
Ga0105239_123945032	3300010375	Corn Rhizosphere	MTFWLFSGWFQKSGAAIWASLSASFFFWVGASKIHPDGKGLVAEGLELAVEFF*
Ga0136449_1001376904	3300010379	Peatlands Soil	MIFWLFPGWLQKPGAAVCSSVSWSLDFSAGASKIPPHSQGLFAEGGVLAF*
Ga0150983_141402791	3300011120	Forest Soil	MTFWLFSGWLQKSGAEIWASVWASFCLCAGASKIPPHGQGLVAEGEIFAVEFFY
Ga0150985_1200261091	3300012212	Avena Fatua Rhizosphere	MIFWLRSGLFQKSGPEMTLSLRLSFWRCAGASKIPPHGRRLVAEGLVFAL*
Ga0181529_104203722	3300014161	Bog	MIFWLFSGWLQKPGAAVCSSVCWSLDFSAGASKIPPHSQGLFAEGDVLAF*
Ga0181532_104840141	3300014164	Bog	MIFWLFSGWLQKPGAAVCSSVCWSLDLSAGASKIPPHSQGLFAEGGVLAF*
Ga0181532_108096732	3300014164	Bog	FWLFSGCDQKSGWAICASVLASFCFCAEASKIPPDGQRLFTEGQVFAV*
Ga0181526_110070972	3300014200	Bog	MTFWLFSGWFQKSGAEIWSSVLASFCFWAGASKIPPHGQGLVAEGLIGAF*
Ga0182018_100110916	3300014489	Palsa	MIFWLLPGWFQKPGAAVCSSVSWSLDFSAGTSKIPPHSQGLFAEGSVLAF*
Ga0182013_101246504	3300014492	Bog	CSNFLRSCMTFWLFSGWFQKSGAEIWSSVVASFCFCRGASKIPPHGQGLVAERLVGAF*
Ga0182015_100100663	3300014495	Palsa	MIFWLFSGWLQKSGAAVCSSNFCSLDLSAGASKIPPHGQGLIAEGRVAVF*
Ga0182024_1000108130	3300014501	Permafrost	LRACITFWLFSGWLQKSGAAICSSVVASFFFCAGASKIPPHSQGLFAEGQIFAV*
Ga0182021_116475922	3300014502	Fen	MILWLFSGWLQKSGTATCCSTFSSLDFCAGASKIPPHGERLFAEGSVLSF*
Ga0181519_103459731	3300014658	Bog	AQKSGAEVCSSILASFCFCVETSKIPPHGQGLFAEGHVCAFQLF*
Ga0181505_110817563	3300016750	Peatland	MIFWLFSGWLQKPGAAVCSSVCWSLDFSAGASKIPPHSQGLFAEGDVLAF
Ga0187819_106824931	3300017943	Freshwater Sediment	QKSGAEDCSSIFCSLDFCAGASKIPPHGERLFAEGEVLPF
Ga0187879_100490574	3300017946	Peatland	MIFWLLPGWLQKSGAAVCSSVSWSLDFSAGASKIPPHGQSLFAEGDVLAFQIVERDHSTQ
Ga0181520_106895592	3300017988	Bog	MTFWLFSGWFQKSGAEICASVVASFSFCAGASKIPPHGQGLVAEGLVGAF
Ga0187885_102492532	3300018025	Peatland	MIFWLLPGWFQKPGAAVCSSVSWSLDFSAETSKIPPHSQGLFAEGSVLAFEFV
Ga0187863_100701651	3300018034	Peatland	LSSMRLRCCMIFWLFSGWFQKPGAAVCSSVCWSLDFSAGASKIPPHSQGLFAEGGVLAF
Ga0187883_103426281	3300018037	Peatland	MTFWLFSGWFQKSGAEIWSSVLASFCFWAGASKIPPHGQGLVAEGLIGAF
Ga0187855_100043758	3300018038	Peatland	MIFWLFSGWFQKPGALVCSSTFCSLDFCAGASKIPPHGERLFAEGRVLSF
Ga0196963_103059022	3300020215	Soil	MIFWLFSGLFQKSGAEMRASLWVSFWRCPGASKIPPHGSRLVAEGLVFAL
Ga0210399_112125291	3300020581	Soil	QKSGAEIWASVSASFFFCAGASKIPPHGQGLVAEGLEFAFDLF
Ga0210401_101618843	3300020583	Soil	MTFWLLSGWFQKSGAEICSSVLASFCLCAGASKIPPHGQGLVAQREIFAV
Ga0210400_111806802	3300021170	Soil	MTFWLLSGWFQKSGAEICCSVLASFCLWAGASKIPPHGQGLVAQREIFAV
Ga0182009_106270041	3300021445	Soil	TFWLLPGWLQKSAAPICSSVLASFCFCAGASKIPPHGQSLIAEGLVGAL
Ga0213851_12699581	3300021860	Watersheds	TFWLFSGWVQKSGAEIWASVSASFFFCAGASKIPPHGQGLVAEGLEFAFELF
Ga0224546_10289343	3300022515	Soil	MIFWLLPGWFQKPGAAVCSSVSWSLDFSAGTSKIPPHSQGLFAEGSVLAF
Ga0224554_10937691	3300023068	Soil	MRLRCCMIFWLFSGWFQKPGAAVCSSVCCSLDFSAGASKIPPHSQGLFAEGGVLAF
Ga0256681_114433334	3300023311	Freshwater	MIFWLFSGWFQKPGAEVCSSMPASFRFCAETSKIPPHGQGLFAEGQVCAV
Ga0207645_105359611	3300025907	Miscanthus Rhizosphere	WFQKSGALICASVVASFCFWPGASKIPPHGQGLVAQRLVFPF
Ga0207701_115120761	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	FWLFSGCDQKSGAAICSSVLLSFCFCAGASKIPPHGERLFAEGLVCAV
Ga0207670_102946482	3300025936	Switchgrass Rhizosphere	MIFWLFSGLFQKSGAEMRPSLWASFDRWPEASKIPPHGRRLVAEGLVFAL
Ga0207661_109170101	3300025944	Corn Rhizosphere	CITFWLFSGWLQKSGAEICSSVRLSFCFCDGASKIPPDGQRLVAERLIFAFQLF
Ga0207661_121356982	3300025944	Corn Rhizosphere	MTFWLFSGWLQKSGAEICSSLLLSFCFWAGASKIPPDGQGLVAERLIFAFQLF
Ga0207674_104669462	3300026116	Corn Rhizosphere	MTFWLFSGWDQKSGAAICSSVLLSFCFCAGASKIPPHGERLFAEGLVFAV
Ga0209177_103605302	3300027775	Agricultural Soil	LLEGLFQKSGAEICASVLASFCFCAGASKIPPHGQCLVAEGLVGAL
Ga0209517_106655732	3300027854	Peatlands Soil	RSRITFWLFSGWAQKPGAAVCSSILASFCFCAETSKIPPHGQGLFAEGQVFAVELF
Ga0209067_100009248	3300027898	Watersheds	MTFWLFSGWFQKSGAEICASVSASFFFWAGASKIPPHGQGLVAEGLIFAFELF
Ga0209415_106731342	3300027905	Peatlands Soil	MTFWLFSGWVQKPGAEVCSSILVSFCFCAETSKIPPHSQGLFAEGQVRALEFF
Ga0209168_101293112	3300027986	Surface Soil	MIFWLFSGWFQKSGCAICSSVWASFFFCAGASKIPPHGQSLFAEGQIFAV
Ga0311365_109680642	3300029989	Fen	MTFWLFSGWFQKSGAAICSSVSANFFFCAEASKIPPHGEGLVAKRLVLAV
Ga0311336_102720193	3300029990	Fen	MTFWLFSGWFQKSGAAICSSVSASFFFCVEASKIPPHGEGLVAKRLVLAV
Ga0302181_101528812	3300030056	Palsa	MIFWLLPGWFQKPGAAVCSSVSWSLDFSAETSKIPPHSQGLFAEGSVLAF
Ga0311349_112076472	3300030294	Fen	MTFWLFSGWFQKSGAAICSSVSASFFFCAEASKIPPHGEGLVAKRLVLAV
Ga0311353_105038503	3300030399	Palsa	RLSSRRLRCCMIFWLLPGWFQKPGAAVCSSVSWSLDFSAGTSKIPPHSQGLFAEGSVLAFEFV
Ga0265745_10334761	3300030759	Soil	AGLFQKSGAEVCSSNFWSLDFWPGASKIPPHGESLFAEGTVLAF
Ga0302326_105959894	3300031525	Palsa	FWLFSGWFQKPGAAVCSSVCWSLDFSAGASKIPPDSQGLFAEGGVLAF
Ga0302326_113781581	3300031525	Palsa	MIFWLFSGWFQKPGAAVCSSVCWSLDFSAGASKIPPHSQGLFAEGSVLAF
Ga0265313_103790962	3300031595	Rhizosphere	SLVMACSNFLRSCMTFWLFSGWFQKSGEDIWSSVLASFCFWAGASKIPPHGQGLVAEGLIGAF
Ga0318572_107320731	3300031681	Soil	FWLFSGWLQKSGAEICSSVLASFCFCAGASKIPPHGQCLVAEGLILAF
Ga0310686_1155003852	3300031708	Soil	MIFWLFSGWFQKPGADVCFSVSWSFDFSAGTSKIPPHSQGLFAEGSVLAF
Ga0310813_109268452	3300031716	Soil	MIFWLFSGLFQKSGAEMRASLLASFCRCPGASKIPPHGRGLVAEGLVFAL
Ga0318493_106816381	3300031723	Soil	LRSCITFWLFSGWFQKSGAPICSSILVSFCFCAGASKIPPHGQGLVAEGQKCAFQLV
Ga0318523_106262781	3300031798	Soil	MTFWLFSGLFQKSGAVMTTSLFANFSRWPGASKIPPDGRRLVAEGLVFAL
Ga0306921_126646221	3300031912	Soil	MTFWLFSGWLQKSGLEICSSVLASFSFCAGASKIPPHGQCLVAEGLVLAVEFV
Ga0308175_1001892662	3300031938	Soil	MIFWLFSGLFQKSGAEIRLSLWLSFCRWPAASKIPPDGSRLVAEGLVFAL
Ga0318570_105882222	3300032054	Soil	MTFWLFSGWLQKSGAEICSSVLASFCFCAGASKIPPHGQCLVAEGLVLAVEFV
Ga0318533_113929921	3300032059	Soil	RLRACITFWLFSGWFQKSGAAICSSLSASFFFWAGASKIPPHGQGLVAEGLVLAV
Ga0306920_1025750622	3300032261	Soil	ITFWLFSGWFQKSGAAICSSLSASFFFWAGASKIPPHGQGLVAEGLVLAV
Ga0335085_100519834	3300032770	Soil	LRSCITFWLFSGWDQKSGAEISFSVSFSFCFWVEASKIPPHGQGLVAEGLVGALLLV
Ga0335085_105416432	3300032770	Soil	MTFWLFSGWLQKSGAPICSSILFSFCFCAGASKIPPHGQRLFAEGQKFAFQLV
Ga0335085_125522212	3300032770	Soil	CMTFWLFSGWLQKSGAEICSSDWASFFFCAGASKIPPDGQGLVAEGLVCAF
Ga0335079_100005757	3300032783	Soil	MTFWLFSGWLQKSGWLICSSSLLSFCFWVGASKIPPHRERLFAEGKIFAVQFFYGH
Ga0335079_114585521	3300032783	Soil	FLRSCMTFWLFSGWFQKSGAEIWSSVLASFCFWAGASKIPPHGQGLVAEGLVGAF
Ga0335079_120611712	3300032783	Soil	MASSRRFRPCMTFWLFSGWVQKSGAEIWASVSANFFFWEGASKIPPHGQGLLAEGLKFALELV
Ga0335078_100526073	3300032805	Soil	MTFWLFSGCDQKSGCAMRSSILASFCFCAGASKIPPQGQSLFAEGLILAV
Ga0335078_100915504	3300032805	Soil	MIFWLVSGWLQKPGAAVCSSVCWSLDFSEGASKIPPDSQGLFAEGSILAF
Ga0335078_102084252	3300032805	Soil	MTFWLFSGWLQKSGAEICCSVVANFCFWAGASKIPPHGQGLVAEGLISAF
Ga0335078_104779362	3300032805	Soil	MIFWLFSGWLQKSGAPICSSTFCSLDFRVGESKIPPHGQGLFAEGVILPF
Ga0335078_106792602	3300032805	Soil	MIFWLFSGRFQKSGAEVRSSIFCSLDFSAGASKIPPDSQGLFAEGGIFAF
Ga0335080_101042121	3300032828	Soil	MTFWLFSGWVQKSGAEIWASVSANFFFWEGASKIPPHGQGLLAEGLEFALELV
Ga0335080_109103711	3300032828	Soil	MTFWLFSGWFQKSGAEIWSSVLASFCFWAGASKIPPHGQGLVAEGLVGAF
Ga0335081_105875052	3300032892	Soil	MTFWLFSGWLQKSGAEICCSLWANFCFCAGASKIPPHGEGLFAEGKVFAL
Ga0335069_115144561	3300032893	Soil	MTFWLFSGWFQKSGADICCSVLASFCFWAGASKIPPHGQGLVAEGLVSAF
Ga0335073_101664183	3300033134	Soil	MTFWLFSGWLQKSGAEIWSSVLANFSFWAGASKIPPHGQSLVAEGLIGAF
Ga0335077_107478083	3300033158	Soil	QKPGSTTFSSIFCSLDFCAGASKIPPHGERLFAEGTVLPF
Ga0335077_109808261	3300033158	Soil	MTFWLFSGWLQKSGWLICSSSLLSFCFWVGASKIPPHRERLFAEGKIFAVQFFY
Ga0316624_108191021	3300033486	Soil	SCITFWLFSGWLQKSGVPICCSTFSSLDFWVGASKIPPHGERLFAEGSVLSF
Ga0316628_1000894833	3300033513	Soil	MTFWLFSGWLQKSGVPICCSTFSSLDFWVGASKIPPHGERLFAEGSVLSF
Ga0334837_009761_3004_3156	3300033823	Soil	MIFWLFSGWFQKPGAAVCSSVCCSLDFSAGASKIPPHSQGLFAEGGVLAF

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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