Basic Information | |
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Family ID | F092351 |
Family Type | Metagenome |
Number of Sequences | 107 |
Average Sequence Length | 41 residues |
Representative Sequence | MKLEDFIDFHVLFMTICILIAYEYIMNSSNIIVEKKINDK |
Number of Associated Samples | 76 |
Number of Associated Scaffolds | 107 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.93 % |
% of genes near scaffold ends (potentially truncated) | 16.82 % |
% of genes from short scaffolds (< 2000 bps) | 69.16 % |
Associated GOLD sequencing projects | 69 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.43 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (93.458 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (26.168 % of family members) |
Environment Ontology (ENVO) | Unclassified (72.897 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (80.374 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 51.47% β-sheet: 0.00% Coil/Unstructured: 48.53% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.43 |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Marine Seawater Marine Marine Surface Seawater Marine Seawater Marine Aqueous Seawater Marine Surface Water Sackhole Brine Freshwater To Marine Saline Gradient Seawater Marine Estuarine Salt Marsh Marine Marine Estuarine Water M Pelagic Marine Seawater Macroalgal Surface |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
GS312G0146KB_00360690 | 2189573027 | Marine Estuarine | MKFQIEDFIDFHVLFMTICILIAYEYIMNGTNIIVEKKINDIS |
BBAY92_100112462 | 3300000947 | Macroalgal Surface | MKFQIDNFIDFHVLFMTICILIAYEYIMNSSNIIIEKNK* |
GOS2245_10865694 | 3300001966 | Marine | MKFQIEDFIDFIDFHVLFMTICILIAYEYIMNGTNIIVEKKLKNK* |
GOS2216_100981062 | 3300001972 | Marine | MKIDDFIDYHTLFMTMCIVIAYRYITTDTNIILEKNIQ* |
Ga0073579_12883712 | 3300005239 | Marine | MKFQIEDFIDFHVLFMTICVLIAYEYIMNGTNIIVEKKLN* |
Ga0066849_100818711 | 3300005430 | Marine | MKFQIDDFIDFHVLFMTICILIAYEYIMNGSNIIIEKKLNDKL* |
Ga0076919_103590216 | 3300005731 | M | MKFQIEDFIDFHVFFMTICILIAYEYIMNGTNIIIEKKINDKL* |
Ga0078893_103884313 | 3300005837 | Marine Surface Water | MKLEDFIDFHVLFMTICILIAYEYIMNGSNIIVEKKINDIS* |
Ga0075474_100835833 | 3300006025 | Aqueous | DFIDFHVLFMTICILIAYEYIMNGTNIIIEKKLNDIS* |
Ga0075478_101895302 | 3300006026 | Aqueous | MKLDDFIDFHVLFMTICILIAYEYIMNGTNIIIEKKLNDIS* |
Ga0075445_100051075 | 3300006193 | Marine | MTIDDFIDFHALFLTASAVIAYKYITKENNVIFERKKI* |
Ga0075445_101064542 | 3300006193 | Marine | MNFKIDDYIDFHILFMTISIVIAYKYITDESNIIVEKKN* |
Ga0075445_101924551 | 3300006193 | Marine | MNLKSFKIENYIDFDVLFMTICILIFLEYIMNHSDIIIEKKYTDK* |
Ga0068470_11301721 | 3300006308 | Marine | MKIEDIIDYHTLFMTMCIVIAYKYITIEENIILEKKIQ* |
Ga0068471_15717183 | 3300006310 | Marine | MKIEDIIDYHTLFMTMCIVIAYKYITIEENIILEKKLQ* |
Ga0068500_13431052 | 3300006332 | Marine | MNIKIENYIDFHVLFMTICILIAYEYIMNNSNIIVEKKIKDI* |
Ga0075444_102819952 | 3300006947 | Marine | MNFKIEDYIDFHVLFMTISITIAYKYITNESNIIVEKKDFRTSK* |
Ga0075460_101336242 | 3300007234 | Aqueous | MKFQIDDFIDFHVLFMTICILIAYEYIMNSSNIIVEKKLNDKL* |
Ga0066367_13194982 | 3300007291 | Marine | MDIEDYIDFKVLFTTMCIVIAYKYITLEEDIIIERKLS* |
Ga0114996_101937602 | 3300009173 | Marine | MTFKDFQIDDYIDFDTLFMTICILIFYEYIMNHSDIIIEKKYTDK* |
Ga0114996_103562643 | 3300009173 | Marine | MNLKDFKLEDYIDFHVLFMTMCILVLYHYIMNDSNIIIEKKKP* |
Ga0118722_13162062 | 3300009376 | Marine | MDIEDYIDFKVIFTTMCIVIAYKYITHDENIIIEKKI* |
Ga0114993_112366291 | 3300009409 | Marine | MNFKIEDYIDFHVLFMTISIIIAYKYITDESNIIV |
Ga0114994_100349054 | 3300009420 | Marine | MNLKSFKIENYIDFDTLFMTICILIFYEYIMNHSDIIIEKKYTDK* |
Ga0114994_101309824 | 3300009420 | Marine | MNFEIEDYIDFHVLFVTMCIVIAYRYITDEQDIIVERKID* |
Ga0114994_102274623 | 3300009420 | Marine | MTFKIENYIDFHVLFMTICILIAYEYIMNGSNIIIEKKIKDIS* |
Ga0114994_102807982 | 3300009420 | Marine | MKFEIENYIDFHVLFSTICIVIAYKYITNEQNIIIEKKYNY* |
Ga0114994_105473382 | 3300009420 | Marine | KIEDYIDFHVLFMTISIVIAYKYITDESNIIVEKK* |
Ga0115000_100391271 | 3300009705 | Marine | MNFKIEDYIDFHVLFMTISIIIAYKYITDESNIIVEKKGIK* |
Ga0115000_100452887 | 3300009705 | Marine | MNFKIEDYIDFHVLFMTISIVIAYKYITDESNIIVEKK* |
Ga0115002_108396233 | 3300009706 | Marine | MNLKDFKLEDYIDFHVLFMTMCILVLYHYVMNDSNIIVEKKINDK* |
Ga0114999_100578733 | 3300009786 | Marine | MNFKDFKIDDLIDFHVLFMTMCILIAYHYIMNDSNIIVEKKINDK* |
Ga0114999_100731811 | 3300009786 | Marine | KIEDYIDFHVLFMTISIVIAYKYITDESNIIVEKKN* |
Ga0136655_10034014 | 3300010316 | Freshwater To Marine Saline Gradient | MKLEDFIDFHVLFMTICVLIAYEYIMNGTNIIVEKKINDK* |
Ga0129324_101002452 | 3300010368 | Freshwater To Marine Saline Gradient | MKFQIEDFIDFHVLFMTICVLIGYEYIMNGTNIIVEKKINDKL* |
Ga0133547_101287002 | 3300010883 | Marine | MNFKIEEYIDFHVLFMTISIIIAYKYITDESNIIVEKRNINK* |
Ga0133547_102495852 | 3300010883 | Marine | MNFKIEDYIDFHVLFMTISLIIAYKYITDGNNIIVEKKN* |
Ga0133547_105050851 | 3300010883 | Marine | MNSKIEDYIDFHVLFMTISIIIAYKYITEESNIIIEKKEIK* |
Ga0133547_106057775 | 3300010883 | Marine | MNFKVEDYIDFHVLFMTITIIIAYKYITDEVNIIIETQT |
Ga0160423_102288803 | 3300012920 | Surface Seawater | MKLEDFIDFHVLFMTICILIAYEYIMNGSNIIIEKKINDIS* |
Ga0160423_105293882 | 3300012920 | Surface Seawater | MKFQIDDFIDFHVLFMTICILIAYEYIMNGSNIIVEKKLNDK* |
Ga0163109_107043692 | 3300012936 | Surface Seawater | MKFQIDDFIDFHVLFMTICILIAYEYIMNSSNIIVEKKLNDK* |
Ga0181413_12127181 | 3300017765 | Seawater | MKLEDFIDFHVLFMTICILIAYEYIMNGTNIIVEKKLKDK |
Ga0181565_106372413 | 3300017818 | Salt Marsh | MKFQIEDFIDFHVLFMTICILIAYEYIMNSSNIIVE |
Ga0181552_106086882 | 3300017824 | Salt Marsh | MKLDDFIDFHVLFMTICILIAYEYIMNGTNIIIEKKLNDIS |
Ga0181607_104795231 | 3300017950 | Salt Marsh | MKLDDFIDFHVLFMTICILIAYEYIMNGSNIIIEKKIKDIS |
Ga0181590_102737383 | 3300017967 | Salt Marsh | MKLDDFIDFHVLFMTICILIAYEYIMNGSNIIVEKKINDKL |
Ga0181606_103609941 | 3300018048 | Salt Marsh | YIDFHVLFMTICILIGYEYIMNNSNIIIEKKIKDI |
Ga0181563_105706511 | 3300018420 | Salt Marsh | MKLDDFIDFHVLFMAICILIAYEYIMNGSNIIVEKKLNDIS |
Ga0181595_101176372 | 3300020053 | Salt Marsh | MNIKIENYIDFHVLFMTICILIGYEYIMNNSNIIIEKKIKDI |
Ga0181603_103023001 | 3300020174 | Salt Marsh | MNIKIENYIDFHVLFMTICILIGYEYIMNNSNIIIEK |
Ga0211658_11180622 | 3300020274 | Marine | NMRFQIEDFIDFHVLFMTICILIAYEYIMNESNIIVEKKIK |
Ga0211497_100753332 | 3300020394 | Marine | MKLEDFIDFHVLFMTICILIAYEYIMNSSNIIVEKKLKDK |
Ga0211583_101277943 | 3300020397 | Marine | MRFQIEDFIDFHVLFMTICILIAYEYIMNESNIIVEKKIKG |
Ga0211636_101374603 | 3300020400 | Marine | MKLEDFIDFHVLFMTICILIAYEYIMNGSNIIVEKKIKDKL |
Ga0211532_103986311 | 3300020403 | Marine | MKLEDFIDFHVLFMTICILIAYEYIMNGSNIIVEKKINDKL |
Ga0211659_100167093 | 3300020404 | Marine | MRFQIEDFIDFHVLFMTICILIAYEYIMNESNIIVEKKIK |
Ga0211496_100016078 | 3300020405 | Marine | MKFQIDDFINFHVLFMTICILIAYEYIMNGSNIIIEKKIKDK |
Ga0211699_102306882 | 3300020410 | Marine | MKIENIIDYHTLFMTMCIVIAYKYITIEENIILEKKI |
Ga0211528_102112892 | 3300020417 | Marine | MKLEDFIDFHVLFMTICILIAYEYIMNGSNIIVEKKNK |
Ga0211576_1000150813 | 3300020438 | Marine | MKLEDFIDFHILFMTICILIAYEYIMGGTNIIIEKKIKDK |
Ga0211576_101002863 | 3300020438 | Marine | MKLDDFIDFHVLFTTICIVIAYQYITNEMNIIVEKKISL |
Ga0211518_100561675 | 3300020440 | Marine | MKFQIDDFIDFHVLFMTICILIAYEYIMNSSNIIIEKKINDKL |
Ga0211574_100076748 | 3300020446 | Marine | MKLEDFIDFHVLFMTICILIAYEYIMNSSNIIVEKNLNDIS |
Ga0211574_100534143 | 3300020446 | Marine | MKFEIENYIDFHVLFTTISIVIAYKYITHEENIIIEKKIG |
Ga0211691_101549611 | 3300020447 | Marine | MKINNIIDYHTLFMTMCIVIAYKYITIEENIILEKKYK |
Ga0211638_101028902 | 3300020448 | Marine | MKLEDFIDFHVLFMTICILIAYEYIMNSSNIIVEKKINDK |
Ga0211486_100234694 | 3300020460 | Marine | MDIEDYIDFKVLFTTMCIVIAYKYITLEENIIIERKLT |
Ga0211577_100241467 | 3300020469 | Marine | MKFEIENYIDFHILFTTICIVIAYKYITNEQNIIIEKKFN |
Ga0211585_100317095 | 3300020477 | Marine | MKIEDIIDYHTLFMTMCIVIAYKYITIEENIILEKKI |
Ga0206682_100336735 | 3300021185 | Seawater | MKLEDFIDFHVLFMTICILIAYEYIMGQSNIIVEKKLKDK |
Ga0222719_104231762 | 3300021964 | Estuarine Water | ILLNINMKLEDFIDFHVLFMTICILIAYEYIMNGTNIIVEKKINDKL |
Ga0222719_108283271 | 3300021964 | Estuarine Water | MKLEDFIDFHVLFMTICILIAYEYIMNGTNIIVEKKIND |
(restricted) Ga0233426_100488784 | 3300022920 | Seawater | MKFQIDDFIDFHVLFMTICILIAYEYIMNGSNIIVEKKLNDK |
(restricted) Ga0233432_1000939412 | 3300023109 | Seawater | MTFKIDDYIDFHVLFMTICILIAYEYIMNGSNIIIKKNII |
(restricted) Ga0233432_100138333 | 3300023109 | Seawater | MKLEDFIDFHVLFMTICILIAYEYIMNGSNIIVEKKLKDK |
(restricted) Ga0233432_102646362 | 3300023109 | Seawater | MKLEDFIDFHVLFMTICILIAYEYIMNETNIIIEKKINDK |
(restricted) Ga0233432_103592303 | 3300023109 | Seawater | MKLDDFIDFHVLFMTICILIAYEYIMNGTNIIVEKKLNDK |
Ga0208542_11128782 | 3300025818 | Aqueous | MKFQIDDFIDFHVLFMTICILIAYEYIMNSSNIIVEKKLNDKL |
Ga0208547_11382222 | 3300025828 | Aqueous | FQIDDFIDFHVFFMTICILIAYEYIMNGTNIIVEKKINDK |
Ga0209630_103348012 | 3300025892 | Pelagic Marine | MKLEDFIDFHVLFMTICVLIGYEYIMNDTNIIIEKKINDKL |
Ga0209335_101631833 | 3300025894 | Pelagic Marine | MKLQIEDFIDFHVLFMTICIIIAYEYIMGQSNIIVEKKLKDK |
Ga0209383_11742182 | 3300027672 | Marine | MNFKIDDYIDFHILFMTISIVIAYKYITDESNIIVEKKN |
Ga0209383_11867012 | 3300027672 | Marine | MTIDDFIDFHALFLTASAVIAYKYITKENNIIFERKKI |
Ga0209710_10349843 | 3300027687 | Marine | MNLKSFKIENYIDFDTLFMTICILIFYEYIMNHSDIIIEKKYTDK |
Ga0209709_101395742 | 3300027779 | Marine | MTFKIENYIDFHVLFMTICILIAYEYIMNGSNIIIEKKIKDIS |
Ga0209090_100632391 | 3300027813 | Marine | MNFKDFKIDDYIDFDTLFMTICILIFYEYIMNNSNI |
Ga0209090_104545832 | 3300027813 | Marine | MNFKIEDYIDFHVLFMTISLIIAYKYITDGNNIIVEKKN |
Ga0209090_105651682 | 3300027813 | Marine | MNFKIEDYIDFHVLFMTISIVIAYKYITDESNIIVEKKN |
Ga0209089_100326454 | 3300027838 | Marine | MTFKDFQIDDYIDFDTLFMTICILIFYEYIMNHSDIIIEKKYTDK |
Ga0209402_100539764 | 3300027847 | Marine | MKFEIENYIDFHVLFSTICIVIAYKYITNEQNIIIEKNLMIENKFN |
Ga0228646_11121841 | 3300028280 | Seawater | MKLEDFIDFHVLFMTICILIAYEYIMNSSNIIIEKKLNDKL |
Ga0308025_10866513 | 3300031143 | Marine | YKMNFKIEDYIDFHVLFMTISIVIAYKYITGESNIIIEKK |
Ga0308025_11061011 | 3300031143 | Marine | MNFKIEDYIDFHVLFMTISIVIAYKYITDESNIIVEKKEINY |
Ga0308025_11273783 | 3300031143 | Marine | MNLKSFKIENYIDFDVLFMTICILIFLEYIMNHSDIIIEKKYTDK |
Ga0308010_10609082 | 3300031510 | Marine | MNFKIEDYIDFHVLFMTISIVIAYKYITDESNIIVEKKEINYDKKNI |
Ga0307488_100039297 | 3300031519 | Sackhole Brine | MNFKDFKIDDYIDFDTLFMTICILIFYEYIMNNSDIIIEKKYTDK |
Ga0307488_101159993 | 3300031519 | Sackhole Brine | MNFKDFKIDDYIDFDTLFMTICILIFYEYIMNNSNIIIEKKSTDK |
Ga0307488_102940972 | 3300031519 | Sackhole Brine | DDYIDFDTLFMTICILIFYEYIMNNSNIIIEKKSTDK |
Ga0307488_104221133 | 3300031519 | Sackhole Brine | MNFKDFNIDDYIDFDTLFMTICVLIFYEYIMNNSDIIIEKKYTDK |
Ga0307488_104830011 | 3300031519 | Sackhole Brine | MNFKDLNIDDYIDFDTLFMTICVLIFYEYIMNNSDIIIEKKYTDK |
Ga0307488_108501351 | 3300031519 | Sackhole Brine | MNFKDFNIDDYIDFDTLFMTVCILIFYEYIMNNSNIIIEKKYKDK |
Ga0315316_104831752 | 3300032011 | Seawater | MDIEDYIDLKVLFTTMCIVIAYKYITLEEDIIIEKKLS |
Ga0315316_114703211 | 3300032011 | Seawater | MKIENIIDYHTLFMTMCIVIAYKYITIEENIILEQKI |
Ga0315315_100655493 | 3300032073 | Seawater | MNIKIENYIDFHVLFMTICILIAYEYIMNNSNIIVEKKIKDI |
Ga0310345_100379908 | 3300032278 | Seawater | MDIEDYIDFKVIFTTMCIVIAYKYITLEEDIIIEKKLS |
Ga0310345_103126501 | 3300032278 | Seawater | MDIEDYIDFKVLFTTMCIVIAYKYITLEEDIIIERKLS |
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