NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F092332

Metagenome Family F092332

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F092332
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 88 residues
Representative Sequence MAQRTRSIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETAKYNCSD
Number of Associated Samples 87
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 42.99 %
% of genes near scaffold ends (potentially truncated) 34.58 %
% of genes from short scaffolds (< 2000 bps) 89.72 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (69.159 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(14.019 % of family members)
Environment Ontology (ENVO) Unclassified
(40.187 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(71.963 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.
1F14TC_1003379541
2JGI1027J11758_130418181
3JGI24036J26619_101198672
4Ga0062595_1024918771
5Ga0065707_100246273
6Ga0070668_1010979051
7Ga0070675_1019751111
8Ga0070674_1004061181
9Ga0070667_1016156142
10Ga0070711_1018877641
11Ga0070700_1013255811
12Ga0068860_1003647181
13Ga0075432_105741391
14Ga0075422_100182243
15Ga0075428_1005528962
16Ga0075430_1008402912
17Ga0075431_1015337571
18Ga0075433_106829111
19Ga0075425_1002953173
20Ga0075425_1004885281
21Ga0075425_1025204841
22Ga0075429_1005005621
23Ga0068865_1008659692
24Ga0105245_122417911
25Ga0105245_131972971
26Ga0066709_1004060011
27Ga0114129_104130731
28Ga0111538_130368282
29Ga0111538_130658531
30Ga0105249_124608872
31Ga0134122_102019243
32Ga0134122_111890401
33Ga0138514_1000486521
34Ga0137463_10873231
35Ga0137463_10957571
36Ga0137382_105711331
37Ga0137399_103539982
38Ga0137399_106912471
39Ga0137381_112122331
40Ga0137376_102918201
41Ga0137370_101662511
42Ga0137375_104863611
43Ga0157340_10038881
44Ga0157348_10013791
45Ga0157346_10106961
46Ga0157331_10093261
47Ga0157335_10271411
48Ga0157323_10180011
49Ga0157339_10085861
50Ga0157342_10402841
51Ga0157315_10382582
52Ga0157338_10371551
53Ga0157354_10237942
54Ga0157352_10207221
55Ga0137358_109774101
56Ga0137397_104479082
57Ga0137394_108462951
58Ga0137413_110134662
59Ga0137419_118013701
60Ga0164302_101961393
61Ga0163162_109792391
62Ga0137418_100884822
63Ga0137412_110418071
64Ga0137403_110608091
65Ga0132258_101981338
66Ga0132258_102076904
67Ga0132258_133316171
68Ga0132256_1010039221
69Ga0132256_1031300821
70Ga0132256_1036729891
71Ga0132257_1011130181
72Ga0132257_1017929192
73Ga0132255_1002884085
74Ga0132255_1032624112
75Ga0132255_1045765711
76Ga0163161_102630691
77Ga0184620_100771073
78Ga0184611_12192962
79Ga0184635_100388011
80Ga0184635_101067641
81Ga0184624_100087397
82Ga0184624_100780634
83Ga0184625_100294574
84Ga0184625_101611542
85Ga0184639_101867552
86Ga0190270_105548602
87Ga0193725_10895171
88Ga0193727_11395222
89Ga0193719_104083161
90Ga0222622_101979773
91Ga0207697_101376941
92Ga0207663_115537451
93Ga0207681_108712012
94Ga0207701_100243026
95Ga0207709_107155481
96Ga0207669_105929631
97Ga0207704_111048461
98Ga0207712_109145911
99Ga0209481_101866822
100Ga0207428_100868091
101Ga0307469_101981503
102Ga0307469_104652021
103Ga0307469_116838531
104Ga0307468_1000306471
105Ga0307468_1010849981
106Ga0307471_1006707722
107Ga0307472_1027847951
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 37.63%    β-sheet: 12.90%    Coil/Unstructured: 49.46%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090MAQRTRSIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETAKYNCSDSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
30.8%69.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Groundwater Sediment
Groundwater Sediment
Soil
Vadose Zone Soil
Terrestrial Soil
Unplanted Soil
Switchgrass Rhizosphere
Soil
Soil
Grasslands Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Hardwood Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
8.4%5.6%14.0%2.8%6.5%2.8%7.5%7.5%14.0%2.8%2.8%2.8%2.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TC_10033795413300000559SoilMAQRTRSIDISVREARHKVYNELCTAYRRSGQDADFGLRADDVIGDLAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD*
JGI1027J11758_1304181813300000789SoilVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELTIPRNVFTEALDGFADVKGELIVEMFERNGERY
JGI24036J26619_1011986723300002128Corn, Switchgrass And Miscanthus RhizosphereMAQRRSNEISVLEARHKIFNQLCIAYRRSAQDPDFGLRAYDVMVELAIPLSLFAEALDGFADVRGELIVEMFERKGERYIRLGETAKYNCSD*
Ga0062595_10249187713300004479SoilMAQRRSNEISVLEARHKIFNQLCTAYRRSAQDPDFGLRAYDVMVELAIPLSLFAEALDGFADVNGELIVEMFERNGERYI
Ga0065707_1002462733300005295Switchgrass RhizosphereRSAQDPDFGLRAYDVMVELAIPLSLFAEALDGFADVNGELIVEMFERNGERYIRLGETAKYNCSD*
Ga0070668_10109790513300005347Switchgrass RhizosphereMAQRTRSIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD*
Ga0070675_10197511113300005354Miscanthus RhizosphereVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETAKYNCSD*
Ga0070674_10040611813300005356Miscanthus RhizosphereMAQRRSNEISVLEARHKIFNQLCIAYRRSAQDPDFGLRAYDVMVELAIPLSLFAEALDGFADVNGELIVEMFERNGERYIRLGETAKYNCSD*
Ga0070667_10161561423300005367Switchgrass RhizosphereML*MAQS*STEISLLEARHKIFNKLCSAYRRAGQDANFGLLAYDVMVELAIPRNVFAEALDGFADIRGELIVEMFERNGERYIRLGETAKYNCSD*PPPTL*PDLVMREP*
Ga0070711_10188776413300005439Corn, Switchgrass And Miscanthus RhizosphereMAQRRSNEISVLEARHKIFNQLCTAYRRSAQDPNFGLLAYDVMVELAIPRNVFAEALDGFVDVNGELIVEMVERDGERYIRLGETAKYNCSD*
Ga0070700_10132558113300005441Corn, Switchgrass And Miscanthus RhizosphereIFNQLCTAYRRSAQDPDFGLRAYDVMVELAIPLSLFAEALDGFADVNGELIVEMFERNGERYIRLGETSKYNCSD*
Ga0068860_10036471813300005843Switchgrass RhizosphereMAQRTRSIDISVREARHKIFNKLCSAYRRSGQDPNFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD*
Ga0075432_1057413913300006058Populus RhizosphereMAQRTRSIDISVREARHKVYNELCTAYRRSGQDADFGLRADDVIGDLAIPRNVFAEALDGFADVRGELIVEMFERNGERYIRLGETAKYNCSD*
Ga0075422_1001822433300006196Populus RhizosphereMGQSRSTEIPVLEARHKIFNRLCSAYRRAGQDPDFGLRGYDVMVELAIPRNVFAEALDGFADARGELIVVMFERDGERYIRLGETAKYNCSD*
Ga0075428_10055289623300006844Populus RhizosphereMGQSRSTEISLLEARHKIFNKLCSAYRRAGQDANFGLLAYDVMVELAIPRNVFAEALDGFADVRGELIVEMFERNGERYIRLGETAKYNCSD*
Ga0075430_10084029123300006846Populus RhizosphereMGQSRSTEIPVLEARHKIFNRLCSAYRRAGQDPDFGLRGYDVMVELAIPRNVFAEALDGFADARGELIVVMFERDGERYIRLG
Ga0075431_10153375713300006847Populus RhizosphereMAQRTRSIDISVREARHKVYNELCTAYRRSGQDADFGLRADDVIGDLAIPQNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD*
Ga0075433_1068291113300006852Populus RhizosphereMAQRTRSIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSG*
Ga0075425_10029531733300006854Populus RhizosphereMAQRTRPIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD*
Ga0075425_10048852813300006854Populus RhizosphereMAQRRSNEISVLEARHKIFNQLCTAYRRSAQDPDFGLRAYDVMVELAIPLSLFAEALDGFADVNGELIVEMFERNGERY
Ga0075425_10252048413300006854Populus RhizosphereHKIFNKLCSAYRRAGQDANFGLLAYDVMVELAIPRNVFAEALDGFADVRGELIVEMFERNGERYIRLGETAKYNCSD*
Ga0075429_10050056213300006880Populus RhizosphereLCTAYRRSGQDADFGLRADDVIGDLAIPQNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD*
Ga0068865_10086596923300006881Miscanthus RhizosphereMAQRRSNEISVLEARHKIFNQLCTAYRRSAQDPDFGLRAYDVMVELAIPLSLFAEALDGFADVNGELIVEMFERNGERYIRLGETAKYNCSD*
Ga0105245_1224179113300009098Miscanthus RhizosphereMAQSRSTEISLLEARHKIFNKLCSAYRRAGQDANFGLLAYDVMVELAIPRNVFAEALDGFADIRGELIVEMFERN
Ga0105245_1319729713300009098Miscanthus RhizosphereMAQRTRPIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETAKYNCSD
Ga0066709_10040600113300009137Grasslands SoilVREARHKIFNKLCTAYRRSGQDPNFGLRADDVIGELDIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGGTAKYNCSD*
Ga0114129_1041307313300009147Populus RhizosphereKLCSAYRRAGQDANFGLLAYDVMVELAIPRNVFAEALDGFADVRGELIVEMFERNGERYIRLGETAKYNCSD*
Ga0111538_1303682823300009156Populus RhizosphereMAQRRSNEISVLEARHKIFNQLCTAYRRSAQDPDFGLRAYDVMVELAIPLSLFAEALDGFADVNGELIVEMFERNGERYIRLGET
Ga0111538_1306585313300009156Populus RhizosphereMGQSRSTEISTLEARRKIFNKLRSAYRRSGQDPNFGLLAYDVMVELAIPRNVFAEALDGFADVRGELIVEMFQRKGERYIRLGQTAKYNCSDWSAPL
Ga0105249_1246088723300009553Switchgrass RhizosphereMAQRRSNEISVLEARHKIFNQLCTAYRRSAQDPDFGLRAYDVMVELAIPRNVFAEALDGFVDVNGELIVEMFERDGERYIRLGETAKYNCSD*
Ga0134122_1020192433300010400Terrestrial SoilAQRTRSIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD*
Ga0134122_1118904013300010400Terrestrial SoilMAQSRSTEISLLVARHKIFNKLCSAYRRAGQDANFGLLAYDVMVELAIPRNVFAEALDGFADIRGELIVEMFERNGERYIRLGETAKYNCSD*
Ga0138514_10004865213300011003SoilMAQRTRPIEISVREARHKIFNKLCSAYRRSGQDPNFGLRADDVIKELDMPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCTD*
Ga0137463_108732313300011444SoilMAQRTRSIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERY
Ga0137463_109575713300011444SoilMAQRRSNEISVLEARHKIFNQLCTAYRRSAQDPDFALRAYDVMVELAIPLSLFAEALDGFVDVNGERIVEMFERKGERYIRLGETAKYNCSD*
Ga0137382_1057113313300012200Vadose Zone SoilVNGEEAINGISVLEARHKIFNQLCTAYRRSAQDPDFGLRAYDVMVELAIPLNLFAEALDGFVDVRGELIVAMFERNGERYIRLGETAKYNCGD*
Ga0137399_1035399823300012203Vadose Zone SoilMAQRRSNEISVLEARHKIFNQLCTAYRRSAQDPDFGLRAYDVMVELAIPLSLFAEALDGFADVRGELIVEMFERNGERYIRLGETAKYNCRD*
Ga0137399_1069124713300012203Vadose Zone SoilMAQRTRSIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELDIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD*
Ga0137381_1121223313300012207Vadose Zone SoilMAQRTRSIDISVREARHKIFNKLCSAYRRSGQDSDFGLRADDVIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD*
Ga0137376_1029182013300012208Vadose Zone SoilMAQRKRSIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD*
Ga0137370_1016625113300012285Vadose Zone SoilMAQRKRSIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDKIRELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD*
Ga0137375_1048636113300012360Vadose Zone SoilMAQRTRSIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDVIEELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD*
Ga0157340_100388813300012473Arabidopsis RhizosphereGQDPDFGLRADDIIGELAIPQNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD*
Ga0157348_100137913300012479Unplanted SoilMAQSRSTEISLLEARHKIFNKLCSAYRRAGQDANFGLLAYDVMVELAIPRNVFAEALDGFADIRGELIVEMFERNGERYIRLGETAKYNCGD*
Ga0157346_101069613300012480Arabidopsis RhizosphereMAQRTRSIDISVREARHKIFNKLCGAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD*
Ga0157331_100932613300012486SoilMAQSRSTEISLLEARHKIFNKLCSAYRRAGQDANFGLLAYDVMVELAIPRNVFAEALDGFADVRGELIVEMFERNGERYIRLGET
Ga0157335_102714113300012492Arabidopsis RhizosphereLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGEFIVEMFERNGERYIRLGETSKYNCSD*
Ga0157323_101800113300012495Arabidopsis RhizosphereGQDANFGLLAYDVMVELAIPRNVFAEALDGFADVRGELIVEMFERNGERYIRLGETSKYNCSD*
Ga0157339_100858613300012505Arabidopsis RhizosphereMAQRTRSIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGEFIVEMFERNGERYIRLGETSKYNCSD*
Ga0157342_104028413300012507Arabidopsis RhizosphereIFNKLCSAYRRAGQDANFGLLAYDVMVELAIPRNVFAEALDGFADVRGELIVEMFERNGERYIRLGETAKYNCSD*
Ga0157315_103825823300012508Arabidopsis RhizosphereMTQSQSTEISLLEARRKIFNKLCSAYRRAGQDANFGLLAYDVMVELAIPRNVFAEALDGFADVRGELIVEMFERNGER*
Ga0157338_103715513300012515Arabidopsis RhizosphereMAQRTRSIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELTIPRNVFTEALDGFADVKGELIVEMFERNGERYIRLGETAKYNCSD*
Ga0157354_102379423300012517Unplanted SoilMAQRTRSIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVRGELIVVMFERNGERYIRLGETAKYNCGD*
Ga0157352_102072213300012519Unplanted SoilMAQSRSTEISLLEARHKIFNKLCSAYRRAGQDANFGLLAYDVMVELAIPRNVFAEALDGFADVRGELIVEMFERNGERYIRLGETAKYNCSD*
Ga0137358_1097741013300012582Vadose Zone SoilMAQRTRSIDISVREARHKIFNKLCSAYRHSGQDPDFGLRADDIIGELDIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD*
Ga0137397_1044790823300012685Vadose Zone SoilMAQRAINEISVLEARHKIFNQLCTAYRRSAQDPDFGLRAYDVMVELAIPLNLFAEALDGFADVNGELIVEMFERKGERYIRLGETGKYNCRD*
Ga0137394_1084629513300012922Vadose Zone SoilMAQRAINEISVLEARHKIFNQLCTAYRRSAQDPDFGLRAYDVMVELAIPLNLFAEALDGFADVRGELIVEMFERNGERYIRLGETAKYNCGD*
Ga0137413_1101346623300012924Vadose Zone SoilVNGEEAINGISVLEARHKIFNQLCTAYRCSAQDPDFGLRAYDVMVELAIPLSLFAEALDGFVDVNGELIVEMFERNGERYIRLGETAKYNCSD*
Ga0137419_1180137013300012925Vadose Zone SoilMAQRRSNEISVLEARHKIFNQLCTAYRRSAQDPDFGLRAYDVMVELTIPLSLFAEALDGFVDVNGELIVEMFERNGERY
Ga0164302_1019613933300012961SoilMAQRTRSIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERKGERYIRLGETAKYNCSD*
Ga0163162_1097923913300013306Switchgrass RhizosphereAQDPDFGLRAYDVMVELAIPLSLFAEALDGFADVNGELIVEMFERNGERYIRLGETAKYNCSD*
Ga0137418_1008848223300015241Vadose Zone SoilMAQRRSIEISVLEARHKIFNQLCTAYRRSAQDPDFGLRAYDVMVELTIPLSLFAEALDGFVDVNGELIVEMFERNGERYIRLGETSKYNCSD*
Ga0137412_1104180713300015242Vadose Zone SoilVNGEEAINGISVLEARHKIFNQLCTAYRCSAQDPDFGLRAYDVMVELTIPLSLFAEALDGFVDVNGELIVEMFERKGERYIRLGETGKYNCRD*
Ga0137403_1106080913300015264Vadose Zone SoilMGQSPSTEISILEARRKIFNKLCSAYPRSGQDPNFGLLAYDVMVELAIPRNVFAEAVDGFADVRGELIVEMFERNGREIYGTRRNSEV*
Ga0132258_1019813383300015371Arabidopsis RhizosphereMAQRTRSIDISVREARHKIFNKLCSAYRRSGQDPDLGLRADDIIGELTIPRNVFGEALDGFADVKGELIVKMFERNGERYIRLGETSKYNCSD*
Ga0132258_1020769043300015371Arabidopsis RhizosphereLDLIQSRSIEISVLEARHKIFNKLCSSYRRSGQDPDFGLLGYDVMVELDIPRNVFAEALDGFADVGGELIVVMFARNGERYIRLGETAKLR*
Ga0132258_1333161713300015371Arabidopsis RhizosphereAQDPDFGLRAYDVMVELAMPLSLFAEALDGFVDVNGEFIVEMFERNGERYIRLGETAKYNCGD*
Ga0132256_10100392213300015372Arabidopsis RhizosphereMAQRRSNEISVLEARHKIFNQLCTAYRRSAQDPDFGLRAYDVMVELAIPLSLFAEALDGFADVNGEFIVEMFERNGERYIRLGETAKYNCGD*
Ga0132256_10313008213300015372Arabidopsis RhizosphereMAQSRSTEISLLEARHKIFNKLCSAYRRAGQDANFGLLAYDVMVELAIPRNVFAEALDGFADIRGELIVEMFERNGERYIRLGETAKYNCSD*
Ga0132256_10367298913300015372Arabidopsis RhizosphereFNKLCSSYRRSGQDPDFGLLGYDVMVELDIPRNVFAEALDGFADVGGELIVVMFARNGERYIRLGETAKLR*
Ga0132257_10111301813300015373Arabidopsis RhizosphereMAQRTRSIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPQNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD*
Ga0132257_10179291923300015373Arabidopsis RhizosphereMGQSRSIEISVLEARHTIFNKLCSAYRRSGQDPNFGLLAYDVMVELAIPRNVFAEALDGFADIRGELIVEMFERNGERYIRLGETAKYNCSD*
Ga0132255_10028840853300015374Arabidopsis RhizosphereMAQRTRSIDISVREARHKIFNKLCSAYRRSGQDPDLGLRADDIIGELTIPRNVFGEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD*
Ga0132255_10326241123300015374Arabidopsis RhizosphereHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGEFIVEMFERNGERYIRLGETSKYNCSD*
Ga0132255_10457657113300015374Arabidopsis RhizosphereMAQRLSNEISVLEARHKIFNQLCTAYRRSAQDPDFGLRAYDVMVELAMPLSLFAEALDGFVDVNGEFIVEMFERNGERYIRLGETAKYNCGD*
Ga0163161_1026306913300017792Switchgrass RhizosphereMRFQFLKRGTRFFNQLCTAYRRAGQDPDFGLRAYDVMVELAIPLSLFAEALDGFADVRGELIVEMFERKGERYIRLGETAKYNCSD
Ga0184620_1007710733300018051Groundwater SedimentMAQRRSNEISVLEARHKIFNQLCTAYRRSAQDPDFGLRAYDVMVELAIPLSLFAEALDGFADVRGELVVEMFERNGERYIRLGETAKYNCSD
Ga0184611_121929623300018067Groundwater SedimentMAQRRSNEISVLEARHKIFNQLCTAYRRSAQDPDFGLRAYDVMVELAIPLSLFAEALDGFADVNGELIVEMFERKGERYIRLGETAKYNCSD
Ga0184635_1003880113300018072Groundwater SedimentNDISVLEARHKIFNQLCTAYRRSAQDPDFGLRAYDVMVELAIPLNLFAEALDGFADVNGELIVEMFERKGERYIRLGETAKYNCSD
Ga0184635_1010676413300018072Groundwater SedimentMAQRRSNEISVLEARHKIFNQLCTAYRRSAQDPDFDLRAYDVMVELAIPLSLFAEALDGFADVNGGLIVEMFERNGER
Ga0184624_1000873973300018073Groundwater SedimentMAQRRSNEISVLEARHKIFNQLCTAYRRSAQDPDFDLRAYDVMVELAIPLSLFAEALDGFADVNGGLIVEMFERNGERYIRLG
Ga0184624_1007806343300018073Groundwater SedimentMAQRRSNEISVLEARHKIFNQLCTAYRRSAQDPDFGLRYYDVMVELAIPLNLFAEALDGFADVNGELIVEMFERKGERYIRLGETAKYNCSD
Ga0184625_1002945743300018081Groundwater SedimentVDGAEAINEISVLEARRKIFNQLCTAYRRSAQDPDFGLRYYDVMVELAIPLNLFAEALDGFADVNGELIVEMFERKGERYIRLGETAKYNCSD
Ga0184625_1016115423300018081Groundwater SedimentMAQRRSNEISVLEARHKIFNQLCTAYRRSAQDPDFGLRAYDVMVELAIPLSLFAEALDGFADVNGGLIVEMFERNGERYIRLGETAKYNCSD
Ga0184639_1018675523300018082Groundwater SedimentMAQRRSNEISVLEARHKIFNQLCTAYRRSAQDPDFDLRAYDVMVELAIPLSLFAEALDGFADVNGGLIVEMFERNGERYIRLGETSKYNCSD
Ga0190270_1055486023300018469SoilMAQRRSIEISVLEARHKIFNNLCSAYRRSRQDPNFGLRAYDVMIELAIPRSVFAEALDGFADVNGELIVEMFERNGERYIRLGETAKYNCSD
Ga0193725_108951713300019883SoilDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD
Ga0193727_113952223300019886SoilSIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD
Ga0193719_1040831613300021344SoilMAQRTRSIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD
Ga0222622_1019797733300022756Groundwater SedimentLCTAYRRSAQDPDFGLRASDVMVELAIPLNLFAEALDGFADVNGELIVEMFERNGERYIRLGETAKYNCSD
Ga0207697_1013769413300025315Corn, Switchgrass And Miscanthus RhizosphereARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD
Ga0207663_1155374513300025916Corn, Switchgrass And Miscanthus RhizosphereMAQRLSNEISVLEARHKIFNQLCTAYRRSAQDPNFGLLAYDVMVELAIPRNVFAEALDGFADVRGELIVEMFERNGERYIRLGETAKYNCSD
Ga0207681_1087120123300025923Switchgrass RhizosphereMAQRTRPIDISVREARHTIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETAKYNCSD
Ga0207701_1002430263300025930Corn, Switchgrass And Miscanthus RhizosphereMAQRRSNEISVLEARHKIFNQLCIAYRRSAQDPDFGLRAYDVMVELAIPLSLFAEALDGFADVRGELIVEMFERKGERYIRLGETAKYNCSD
Ga0207709_1071554813300025935Miscanthus RhizosphereMAQRRSNEISVLEARHKIFNQLCIAYRRSAQDPDFGLRAYDVMVELAIPLSLFAEALDGFADVNGELIVEMFERNGERYIRLGETAKYNCSD
Ga0207669_1059296313300025937Miscanthus RhizosphereMAQRRSNEISVLEARHKIFNQLCIAYRRSAQDPDFGLRAYDVMVELAIPLSLFAEALDGFVDVNGEFIVEMFERNGERYIRLGETAKYNCSD
Ga0207704_1110484613300025938Miscanthus RhizosphereMAQRTRSIDISVREARHKIFNKLCSAYRRSGQDPNFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD
Ga0207712_1091459113300025961Switchgrass RhizosphereMAQRTRSIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETAKYNCSD
Ga0209481_1018668223300027880Populus RhizosphereMGQSRSTEIPVLEARHKIFNRLCSAYRRAGQDPDFGLRGYDVMVELAIPRNVFAEALDGFADARGELIVVMFERDGERYIRLGETAKYNCSD
Ga0207428_1008680913300027907Populus RhizosphereMAQRTRSIDISVREARHKVYNELCTAYRRSGQDADFGLRADDVIGDLAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD
Ga0307469_1019815033300031720Hardwood Forest SoilMAQRRSNEISVLEARHKIFNQLCTAYRRSAQDPDFGLRAYDVMVELAIPLSLFAEALDGFADVNGELIVEMFERNGERYIRLGETAKYNCSD
Ga0307469_1046520213300031720Hardwood Forest SoilQRTRSIDISVREARHKIFNKLCSAYRRSGQDLDFGLRADDIIEELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGETSKYNCSD
Ga0307469_1168385313300031720Hardwood Forest SoilSIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVRGELIVEMFERNGERYIRLGETAKYNCSD
Ga0307468_10003064713300031740Hardwood Forest SoilMAQRTRSIDISVREARHKIFNKLCSAYRRSGQDPDFGLRADDIIGELAIPRNVFAEALDGFADVKGELIVEMFERNGERYIRLGKHRSITAVIDTST
Ga0307468_10108499813300031740Hardwood Forest SoilMAQSRSTEISLLEARHKIFNKLCSAYRRAGQDANFGLLAYDVMVELAIPRNVFAEALDGFADVRGELIVEMFERNGERYIRLGETAKYNCSD
Ga0307471_10067077223300032180Hardwood Forest SoilVLEARHKIFNQLCTAYRRSAQDPDFGLRAYDVMVELAIPLSLFAEALDGFADVNGELIVEMFERNGERYIRLGETAKYNCSD
Ga0307472_10278479513300032205Hardwood Forest SoilMAQSRSTEISLLEARHKIFNKLCSAYRRAGQDANFGLLAYDVMVELAIPRNVFAEALDGFADVRGELIVEMFERNGERYIR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.