Metagenome Family F092256

Basic Information
Family ID	F092256
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	66 residues
Representative Sequence	MRRSVLSNVVIGLLTVAIVAGAFASFQRKRSSFERIDFTFRRNNGVIVVKAVDPGSGAA
Number of Associated Samples	95
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (15.888 % of family members)
Environment Ontology (ENVO)	Unclassified (37.383 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.794 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112 1Ga0062590_1026284931 2Ga0062594_1011493672 3Ga0062594_1028187291 4Ga0066683_109003321 5Ga0066684_106263512 6Ga0066678_109168982 7Ga0070687_1012295752 8Ga0070661_1010634442 9Ga0070671_1009931991 10Ga0070671_1019533311 11Ga0070674_1007828522 12Ga0066681_107345382 13Ga0070678_1003034051 14Ga0070706_1016747491 15Ga0068853_1002581701 16Ga0066701_105127052 17Ga0066700_103221391 18Ga0066699_106006271 19Ga0066699_106779051 20Ga0066699_106988321 21Ga0066699_110011371 22Ga0066702_103534052 23Ga0066702_104013181 24Ga0066654_104232841 25Ga0068864_1020121231 26Ga0074472_113860222 27Ga0068863_1020424272 28Ga0075275_10231602 29Ga0075275_10764802 30Ga0075272_10531892 31Ga0075279_100268482 32Ga0097621_1008363922 33Ga0066653_107349472 34Ga0066660_107328181 35Ga0079217_111242872 36Ga0075429_1008472012 37Ga0068865_1021447581 38Ga0075426_105768812 39Ga0075426_113804972 40Ga0075426_115669641 41Ga0099791_102580212 42Ga0099829_108010031 43Ga0099830_115414831 44Ga0099827_118887072 45Ga0105245_123786261 46Ga0105248_123297861 47Ga0105858_12889642 48Ga0134065_103132471 49Ga0134066_103037901 50Ga0134124_111271692 51Ga0134127_105105062 52Ga0105246_101046912 53Ga0137392_103020461 54Ga0137393_101667923 55Ga0137466_10453362 56Ga0120118_10455012 57Ga0137321_11427352 58Ga0137364_106270531 59Ga0137382_109252001 60Ga0137399_109456511 61Ga0137376_100289873 62Ga0137371_106292182 63Ga0137368_105038082 64Ga0137390_113672401 65Ga0137397_111922282 66Ga0164298_108413572 67Ga0164306_118836011 68Ga0163162_133875291 69Ga0120127_100010573 70Ga0134078_105021111 71Ga0137418_106044361 72Ga0134085_103183922 73Ga0132255_1017953792 74Ga0187809_100649642 75Ga0066655_104848922 76Ga0066667_117926942 77Ga0190269_100195674 78Ga0066662_106770001 79Ga0190270_125024171 80Ga0066669_117591451 81Ga0193697_10083003 82Ga0213882_105291221 83Ga0213874_102187092 84Ga0213874_104521091 85Ga0247672_10352072 86Ga0247677_10469662 87Ga0247670_10185612 88Ga0208079_10250131 89Ga0207695_100574471 90Ga0207662_113666591 91Ga0207649_106116802 92Ga0207649_108405812 93Ga0207650_102844992 94Ga0207650_110634431 95Ga0207670_116610552 96Ga0207704_114645952 97Ga0207639_112688872 98Ga0207641_117976612 99Ga0209059_11401501 100Ga0209689_13076722 101Ga0209701_104988293 102Ga0247682_10317201 103Ga0307468_1011404872 104Ga0307475_113914111 105Ga0308173_115874101 106Ga0307471_1023111461 107Ga0334929_087991_424_639
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112 1Ga0062590_1026284931 2Ga0062594_1011493672 3Ga0066683_109003321 4Ga0066684_106263512 5Ga0070687_1012295752 6Ga0070661_1010634442 7Ga0070671_1019533311 8Ga0066681_107345382 9Ga0066701_105127052 10Ga0066699_106006271 11Ga0066699_106779051 12Ga0066699_106988321 13Ga0066702_104013181 14Ga0066654_104232841 15Ga0068864_1020121231 16Ga0074472_113860222 17Ga0068863_1020424272 18Ga0075275_10231602 19Ga0075275_10764802 20Ga0066653_107349472 21Ga0066660_107328181 22Ga0079217_111242872 23Ga0075429_1008472012 24Ga0075426_105768812 25Ga0099791_102580212 26Ga0099829_108010031 27Ga0105858_12889642 28Ga0134065_103132471 29Ga0134066_103037901 30Ga0134127_105105062 31Ga0105246_101046912 32Ga0137392_103020461 33Ga0137382_109252001 34Ga0137399_109456511 35Ga0137371_106292182 36Ga0137368_105038082 37Ga0164298_108413572 38Ga0120127_100010573 39Ga0132255_1017953792 40Ga0187809_100649642 41Ga0066655_104848922 42Ga0190269_100195674 43Ga0213882_105291221 44Ga0208079_10250131 45Ga0207649_108405812 46Ga0307468_1011404872
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58. 1Ga0308173_115874101 2Ga0062590_1026284931 3Ga0062594_1011493672 4Ga0066684_106263512 5Ga0066678_109168982 6Ga0070687_1012295752 7Ga0070671_1009931991 8Ga0066681_107345382 9Ga0070678_1003034051 10Ga0066701_105127052 11Ga0066699_106006271 12Ga0066699_106779051 13Ga0066699_106988321 14Ga0068864_1020121231 15Ga0074472_113860222 16Ga0075275_10231602 17Ga0075279_100268482 18Ga0097621_1008363922 19Ga0079217_111242872 20Ga0075429_1008472012 21Ga0068865_1021447581 22Ga0075426_105768812 23Ga0075426_113804972 24Ga0075426_115669641 25Ga0105245_123786261 26Ga0105858_12889642 27Ga0134065_103132471 28Ga0134066_103037901 29Ga0134127_105105062 30Ga0105246_101046912 31Ga0137392_103020461 32Ga0120118_10455012 33Ga0137321_11427352 34Ga0137364_106270531 35Ga0137399_109456511 36Ga0137376_100289873 37Ga0137368_105038082 38Ga0137390_113672401 39Ga0120127_100010573 40Ga0134078_105021111 41Ga0187809_100649642 42Ga0066655_104848922 43Ga0066667_117926942 44Ga0190269_100195674 45Ga0066662_106770001 46Ga0190270_125024171 47Ga0066669_117591451 48Ga0193697_10083003 49Ga0213874_104521091 50Ga0247672_10352072 51Ga0208079_10250131 52Ga0207695_100574471 53Ga0207704_114645952 54Ga0209059_11401501 55Ga0307468_1011404872 56Ga0307475_113914111 57Ga0307471_1023111461 58Ga0334929_087991_424_639
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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 35.63% β-sheet: 14.94% Coil/Unstructured: 49.43%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF09674	DUF2400	61.68
PF13620	CarboxypepD_reg	4.67
PF00072	Response_reg	1.87
PF08447	PAS_3	0.93
PF13537	GATase_7	0.93

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
No data available in table

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.90%
Host-Associated	Host-Associated	27.10%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	3.74%
Plants	Host-Associated → Plants	27.10%
Terrestrial	Environmental → Terrestrial	69.16%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.95%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.93%
Roots	Host-Associated → Plants → Roots	2.80%
Sediment	Environmental → Aquatic → Sediment	2.80%
Soil	Environmental → Terrestrial → Soil	68.22%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.48%
Loam	Environmental → Terrestrial → Soil → Loam	3.74%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.48%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.93%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	0.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.80%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.87%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.93%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.74%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	3.74%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.80%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.95%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M

Showing 1 to 10 of 95 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062590_1026284931	3300004157	Soil	MRISLVTKLLISALTLAVVLGAFVSFQRKRSSFERIDFTFRRDNGVIVVKSVDPGSGAEAAGIRQGDEIWVIG
Ga0062594_1011493672	3300005093	Soil	MRRSLLANLVILMVTVAVVVGAFASFQRKRSSFERIDFTFTRDKGTIVVKSVDSGS
Ga0062594_1028187291	3300005093	Soil	MRRSFLANLVILAVTVAIVAGAFASFQRKRSSFERIDFTFTRNSGVIVVKTVDPGSNA
Ga0066683_109003321	3300005172	Soil	MRRSIFSNLLILALTVAVVIGAFVSFQRKRSSFERIDFTFTRDNGVIVV
Ga0066684_106263512	3300005179	Soil	MRKSILWNLLILALTVALVGGAFASFQRKRSSFERIDFTFTRRNGVIVVKSVDAESGAQQSGLRAGDEIWLIGDVPSNEVEG
Ga0066678_109168982	3300005181	Soil	MRRSLVANFLILTVTLGLVVGAFASFQRKRSSFERIDFTFTRHNGIVVVKSVDPGSNA
Ga0070687_1012295752	3300005343	Switchgrass Rhizosphere	MRKSVIANVLLAVLTAGIVLGAFVSFQRKRSSFERIDFTFLRQNGVIVVKTVAPG
Ga0070661_1010634442	3300005344	Corn Rhizosphere	MRRSVLSNVVIGLLTVAIIVGAFASFQRKRSSFERIDFTFRRNNGVIVVKTVDSGSGAEAAGLRPGDAIWLI
Ga0070671_1009931991	3300005355	Switchgrass Rhizosphere	MRNSVLSKVVIGVATVAVIVGAFASFQRKRSSFERIDFTFRRDKGIIVVKAIDPGSGAETSGLRPGDHIWLIGDTPS
Ga0070671_1019533311	3300005355	Switchgrass Rhizosphere	MRKSVLTNILISLLTAVMVIGAFASFQRKRSSFERIDFTFERRNGLIVVKNV
Ga0070674_1007828522	3300005356	Miscanthus Rhizosphere	MRRSLLSNVVIGLLTLAIIAGAFASFQRKRSSFERIDFTFRRNKGVIVVKTVDPDSGAAVAGLRPGDAIWLIGGTPTT
Ga0066681_107345382	3300005451	Soil	MRRSVLTNLLILAVTMAIVVGAFVSFQRKRSSFERIDFTFSRLNGLVLVKTVDPGSNA
Ga0070678_1003034051	3300005456	Miscanthus Rhizosphere	MRKSVLTNILISLLTAVMVIGAFASFQRKRSSFERIDFTFERRNGLIVVKNVDAGSGAA
Ga0070706_1016747491	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRRSIFSNLLILALTVAVVIGAFVSFQRKRSSFERIDFTFTRDNGVIVVKAVDPGSG
Ga0068853_1002581701	3300005539	Corn Rhizosphere	MRRSVLSNVVIGLLTVAIIVGAFASFQRKRSSFERIDFTFRRNNGVIVVKTVDSGSGAEAAGL
Ga0066701_105127052	3300005552	Soil	MRKSLIANALILVTTLALVVGAFASFQRKRSSFERIDFTFTRRNGMIVVKSVDPDSNAQRAGLRPVDEIWVIGDTPSNEIEGLQKSLRRI
Ga0066700_103221391	3300005559	Soil	MRRSIFSNLLILALTVAVVIGAFVSFQRKRSSFERIDFTFTRDNGVIVVKAVDPG
Ga0066699_106006271	3300005561	Soil	MRKSSLINVVIALLTVAVVIGAFASFQRKRSSFERIDFQFARANGVIVVKSVDAHSGAEAAGLRPGDQIWLIADTPTTEIQGLQKTLRRFAQTVPM
Ga0066699_106779051	3300005561	Soil	MRKILANALILIVTVALVVGAFASFQRKRSTFERIDFTFTRHNGVIVVKGVDPDSNAQRAGLRPGDEIWVIGD
Ga0066699_106988321	3300005561	Soil	MRRSIFSNLLILALTVAVVIGAFVSFQRKRSSFERIDFTFTRDNGVIVVKAVDAGSGAERAGLRPADKIWMIGETPSTEVEGLQKTLRRIGQS
Ga0066699_110011371	3300005561	Soil	MRRSILANLVILAVTMAAVVGAFASFQRKRSSFERIDFTFTHRDGVVVVKSVE
Ga0066702_103534052	3300005575	Soil	MRRSFLANLVILAVTVAIVAGAFASFQRKCSSFERIDFTFTRDSGVIVVKTVD
Ga0066702_104013181	3300005575	Soil	MSSSVRLPVMRRSFLANLVILAVTVAIVAGAFASFQRKRSSFERIDFTFTRDSGVIVVKT
Ga0066654_104232841	3300005587	Soil	MRRSVLTNAVLGLLTVALVIGAFASFQRKRSSFERIDFQFVRVNGIVVIKSVDPHSGAEAAGLKPGDQIWVIADTPTT
Ga0068864_1020121231	3300005618	Switchgrass Rhizosphere	MRRSALLNLLIVLLTLAIVAGAFASFQRKRSSSERIDFTFTRHNGVIAVKSVDPGSNAAAAGLR
Ga0074472_113860222	3300005833	Sediment (Intertidal)	MRKSLLTNVAISVLTLAVVVGAFVSFQRKRSSFERIDFTFRRDNGVIVVKTVLPDSGAARSGLKPG
Ga0068863_1020424272	3300005841	Switchgrass Rhizosphere	MRRSLLSNVVIGLLTLAIIAGAFASFQRKRSSFERIDFTFRRNKGVIVVKTVDPD
Ga0075275_10231602	3300005892	Rice Paddy Soil	MRRSIFTNAVIGLLTVAIVVGAFVSFQRKRSSFERIDFTFERMNGLIVVKAVDPGSGAEKSGLRAGDQIWLIADTPTTEIEGLQ
Ga0075275_10764802	3300005892	Rice Paddy Soil	MRKSTWINAAILLLTLAVVVGAFASFQRKRSSFERIDFTFTRRNGVIVVKSVDPDSDAAR
Ga0075272_10531892	3300005900	Rice Paddy Soil	MRRSIFTNAVIGLLTVAIVVGAFVSFQRKRSSFERIDFTFERMNGLIVVKAVDPGSGAEKSGLRAGDQIWLIADT
Ga0075279_100268482	3300005903	Rice Paddy Soil	MRKSTWINAAILLLTLAVVVGAFASFQRKRSSFERIDFTFTRRNGVIVVKSVDPDSDAARSGLRAGDAIWLIGDTPSTEVEG
Ga0097621_1008363922	3300006237	Miscanthus Rhizosphere	MRRSFLANLVILALTVAIVAGAFASFQRKRSSFERIDFTFTRANAIIVVKTVDSGSGAEK
Ga0066653_107349472	3300006791	Soil	MAIVVGAFASFQRKRSSFERIDFTFTRHSPNRVVVVKAVDPGSNAEAAGL
Ga0066660_107328181	3300006800	Soil	MRRSILTNALIGLLTVAIVIGAFASFQRKRSSFERIDFRFERINGVSAVKS
Ga0079217_111242872	3300006876	Agricultural Soil	LNSSTGPVRISLIKKVLISLLTVAVVLGAFVSFQRKRSSFERIDFTFRRANGVIVVKSVDKGSGAESAGLKPGD
Ga0075429_1008472012	3300006880	Populus Rhizosphere	MRRSILANALLALLTVGVVLGAFVSFQRKRSSFERIDFSFTRQHGVIVVKTVDPGSGAE
Ga0068865_1021447581	3300006881	Miscanthus Rhizosphere	MRRSFLANLVIFAVTVAIVAGAFASFQRKRSSFERIDFTFTRSNGIIVVKTVDPGSSA
Ga0075426_105768812	3300006903	Populus Rhizosphere	MFKPVLRSVVIGVVTVAAIVGAFASFQRKRSSFERIDFQFTRANGVIVVKAVDPHSNAEAAGLHSGDQIWVIADTPTTEIQG
Ga0075426_113804972	3300006903	Populus Rhizosphere	MRKTVENVLILALTLALVVGAFASFQRKRSSFERIDFTFARHNGAIVVKTVDADSNAQRAGLKPGDEIWVVGDTPSNEVGGLQKTLRRIGA
Ga0075426_115669641	3300006903	Populus Rhizosphere	MRRSVLTNAILGLLTVALVIGAFASFQRKRSSFERIDFQFVRANGIVVIKSVDPHSGAEAAGLKPGDQIWVIADTP
Ga0099791_102580212	3300007255	Vadose Zone Soil	MLSDRAVMRKSILTNIGIMALTVALVVGAFASFQRKRSSFERIDFTFTRRNGVIVVKTVDPDRGAQQAGLRPGDEIWLVGDTPSNEVEGLQKTL
Ga0099829_108010031	3300009038	Vadose Zone Soil	MRRSIFSNLLILALTVAVVIGAFVSFQRKRSSFERIDFTFTRDNGVIVVKAVDPGSGAERTGLRPGDK
Ga0099830_115414831	3300009088	Vadose Zone Soil	MRRSLLTNFLIAILTVSAVVGAFASFQRKRSSFERIDFPFTRRSGVIVVKDVDPGSGAE
Ga0099827_118887072	3300009090	Vadose Zone Soil	MRRSIFSNLLILALTVAVVIGAFVSFQRKRSSFERIDFTFTRDNGVIVVKAVDPGS
Ga0105245_123786261	3300009098	Miscanthus Rhizosphere	MRKSIFSNLLIGALTIALVVGAFASFQRKRSSFERIDFTFSRRNGVIVVKTVDPGSGAGQIGL
Ga0105248_123297861	3300009177	Switchgrass Rhizosphere	MRRSFLANFVILALTVAIVAGAFASFQRKRSSFERIDFTFTRANGIIVVKTVDSGSGAEKSGLRPGDQIWLIGDTPSGQVEGLQKTLRRIG
Ga0105858_12889642	3300009661	Permafrost Soil	MGFSVLMRKSVLTNILISLLTIVLVVGAFASFQRKRSSFERIDFTFARHNGVIVVKNVDTGSGAARAGLRP
Ga0134065_103132471	3300010326	Grasslands Soil	MRKSILSNAVIGILTVSLVVGAFASFQRKRSSFERIDFTFERRNSVVVVKSVDPHSGAEASGLRSGDQIWI
Ga0134066_103037901	3300010364	Grasslands Soil	MRKSVLTNAAIGLLTVAVVIGAFSSFQRKRSSFERIDFQFDRSNGLIVIKSVDAHSGAE
Ga0134124_111271692	3300010397	Terrestrial Soil	MRRSVLANVVIGLLTLAIVAGAFASFQRKRSSFERIDFTFRRNNGVIVVKTVDPGSGAEAAGLRPGDAIWVIGE
Ga0134127_105105062	3300010399	Terrestrial Soil	MRKSLITNLLLAILTVGVVVGAFVSFQRKRSSFERIDFTFQRQNGVIVVKSVDSPSNAEAAGLRAGDAIWVIGETATTEVERLQKTLRRIGTNATMIVNR
Ga0105246_101046912	3300011119	Miscanthus Rhizosphere	MRRSFLANLVILAVTVAIVAGAFASFQRKRSSFERIDFTFTRDSGVIVVKSVDSGGSAETSGLRAG
Ga0137392_103020461	3300011269	Vadose Zone Soil	MRRSLLTNFLIAILTVSAVVGAFASFQRKRSSFERIDFTFTRRSGVIVVKDVDPGSGAEAAGLRSGDEIWVIAETPMTE
Ga0137393_101667923	3300011271	Vadose Zone Soil	MRRSLLTNFLIAILTVSAVVGAFASFQRKRSSFERIDFTFTRRSGVIVVKDVDSGS
Ga0137466_10453362	3300011399	Soil	MRKSVLVNALLAILTIGIVLGAFVSFQRKRSSFERIDFTFQRDNGPIVVKTVDPGS
Ga0120118_10455012	3300012010	Permafrost	MRKSVLTNALISLLTAVLVVGAFASFQRKRSSFERIDFTFERNNGVIVVKKVDMGSGAARAGLR
Ga0137321_11427352	3300012175	Soil	MRKSVLVNALLAILTVGIVLGAFVSFQRKRSSFERIDFTFQRDNGPIVVKTVDPDSN
Ga0137364_106270531	3300012198	Vadose Zone Soil	MRRSALLNLLIVLLTLAIVAGAFASFQRKRSSFERIDFTFTRHSPNRVVVVKAVDPGSNAETACLRAGD
Ga0137382_109252001	3300012200	Vadose Zone Soil	MLSGHAAMRKSLFTNLAIMALTVALVVGAFASFQRKRSSFERIDFTFTRRNGVIVVKTVD
Ga0137399_109456511	3300012203	Vadose Zone Soil	MRKSIFTNALILAVTVAIVAGAFASFQRKRSSFERIDFTFTRHNGVIVVKSVDPESGAQQAG
Ga0137376_100289873	3300012208	Vadose Zone Soil	MRKTVENVLILALTLALVVGAFASFQRKRSSFERIDFTFMRRNGVILVRNVDADSNAQRAGLRPGDEIWVIAD
Ga0137371_106292182	3300012356	Vadose Zone Soil	MRRSALLNLLIVLLTLAIVAGAFASFQRKRSSFERIDFTFTRHNGVIAVKSVDPGSNAAAAGLRRGDEIWVTGDQRTTATEGLHKSLR
Ga0137368_105038082	3300012358	Vadose Zone Soil	MLSSVHMRKSVLANVLISLLTVTLVIGAFASFQRKRSSFERIDFTFQRHNGVIVVKSVDPGSGAERAGLRPSDQIWLIG
Ga0137390_113672401	3300012363	Vadose Zone Soil	MRKSILTNLGIMALTVALVAGAFASFQRKRSSFERIDFTFTRRNGVIVVKTVDPDSGAQQSGLRPGDEIWLIGDTPSNEVEGLQKTL
Ga0137397_111922282	3300012685	Vadose Zone Soil	MRKSLLTNLGIMALTVALVVGAFASFQRKRSSFERIDFTFTRRNGVIVVKTV
Ga0164298_108413572	3300012955	Soil	LNLLIVLLTLAIVAGAFASFQRKRSSFERIDFTFTRHNGVIAVKSVDP
Ga0164306_118836011	3300012988	Soil	MRRSFLSNLVILAVTVAIVAGAFASFQRKRSSFERIDFTFTRDSGVIVVKTVDPGS
Ga0163162_133875291	3300013306	Switchgrass Rhizosphere	MRKSVLTNILISLLTAVMVIGAFASFQRKRSSFERIDFTFERRNGLIVVKNVDAGSGAAK
Ga0120127_100010573	3300013503	Permafrost	MLRRSSAFNVVIALMTIAIVIGAFASFQRKRSSFERIDFTFARNRGMIVVKAVDPNS
Ga0134078_105021111	3300014157	Grasslands Soil	MRNSVLSKVLIGLATVAVVVGAFASFQRKRSSFERIDFTFRRNNGVIAVVKVDPGSGADRSGLRPGDEIWVI
Ga0137418_106044361	3300015241	Vadose Zone Soil	MRRSFLANLVILAVTVAIVAGAFASFQRKRSSFERIDFTFTRSNGIIVVKT
Ga0134085_103183922	3300015359	Grasslands Soil	MLALHAAMRKSIFTNALILAVTVAVVAGAFASFQRKRSSFERIDFTFTRHNGVIAVKSVDPESGAQRAGLRPGDEIWVIGDQPSNEVEGLQKTL
Ga0132255_1017953792	3300015374	Arabidopsis Rhizosphere	MRKTIENVLILALTLALVVGAFASFQRKRSSFERIDFTFSRRNGVIVVKSVDPDSNAQRAGLKTGDE
Ga0187809_100649642	3300017937	Freshwater Sediment	MRKSIVANILILAVTVGLVVGAFASFQRKRSSFERIDFTFARRNGVIVVKSVD
Ga0066655_104848922	3300018431	Grasslands Soil	MRRSVLANLVILAVTMAIVVGAFASFQRKRSSFERIDFTFTRRDGVVVVKSVEAGSNAEAAGLRGGDQIWVVGETPSTEIEGLQKTLRR
Ga0066667_117926942	3300018433	Grasslands Soil	MRRSVLTNLLILTVTVAIVFGAFASFQRKRSSFERIDFTFSRNNGNIAVRTVDPGSNA
Ga0190269_100195674	3300018465	Soil	MRRSHLVNALIALLTLGVIVGAFTSFQRKRSSFERIDFTFGRNNGIIYVKS
Ga0066662_106770001	3300018468	Grasslands Soil	MRRSLVANLLILIATVALVVGAFASFQRKRSSFERIDFTFTRRNGNVIVKTVDPGSNAA
Ga0190270_125024171	3300018469	Soil	MRRSVLLNLLITVLTVGVVIGAFVSFQRKRSSFERIDFTFHRDSGLIVVKTVDPGSDAER
Ga0066669_117591451	3300018482	Grasslands Soil	MRRSFLANLVILALTLAIVAGAFASFQRKRSSFERIDFTFTRDNGVVVVKTVDPGSSAELSGLRP
Ga0193697_10083003	3300020005	Soil	MRRSLLSNVVIGLLTLAIIAGAFASFQRKRSSFERIDFTFRRNKGVIVVKTVDPDSGAAVAGLRPGDAIWLIGGTPTTE
Ga0213882_105291221	3300021362	Exposed Rock	MRKSIFSNLLIGALTIALVVGAFASFQRKRSSFERIDFTFSRRNGVIVVKTVDSGSGAERIGLKPGDEILLIGDT
Ga0213874_102187092	3300021377	Plant Roots	MRRSIVTNALIGLLTVAIVIGAFASFQRKRSSFERIDFRFERINGVIGVKSVD
Ga0213874_104521091	3300021377	Plant Roots	MRKSIFANVLIGALTVALVIGAFASFQRKRSSFERIDFTFSRRNGVVVVKSVDPG
Ga0247672_10352072	3300024187	Soil	MRRSLLANFVILAVTVAIVAGAFASFQRKRSSFERIDFTFTRDNGVVVVKAVDPGSGAEASGLRPGDQIWLIG
Ga0247677_10469662	3300024245	Soil	MRRSLLANFVILAVTVAIVAGAFASFQRKRSSFERIDFTFTRDNGVVVVKAVDPGSGAEASGLRPGDQIWLIGD
Ga0247670_10185612	3300024283	Soil	MRRSLLANFVILAVTVAIVAGAFASFQRKRSSFERIDFTFTRDNGVVVVKAVDPGSGAEASGL
Ga0208079_10250131	3300025481	Arctic Peat Soil	MRRSVLTNVGIGLLTLAFVVGGFASFQRKRSSFERIDFTFTRNNGVVVVKSVEQNSAAARAGLRSGDQI
Ga0207695_100574471	3300025913	Corn Rhizosphere	MRRSIVTNALIGLLTVAIVIGAFASFQRKRSSFERIDFRFERINGVIAVKSVDPGSRAERAGLRPGD
Ga0207662_113666591	3300025918	Switchgrass Rhizosphere	MRISLVTKLLISALTLAVVLGAFVSFQRKRSSFERIDFTFRRDNGVIVVKSVDPGS
Ga0207649_106116802	3300025920	Corn Rhizosphere	MRRSVLSNVVIGLLTVAIIVGAFASFQRKRSSFERIDFTFRRNNGVIVVKTVDSGSGAEAAGLRPGDAIWLIGDTPTTEIEGL
Ga0207649_108405812	3300025920	Corn Rhizosphere	MRNSVLSKVLIGLATVVVIVGAFASFQRKRSSFERIDFTFRRNNGVIAVLKVDPGSG
Ga0207650_102844992	3300025925	Switchgrass Rhizosphere	MRRSFLANLVILALTLAIVAGAFASFQRKRSSFERIDFTFGRDAGVVVVKTVDPGS
Ga0207650_110634431	3300025925	Switchgrass Rhizosphere	MRRSFLANLVILALTLAIVAGAFASFQRKRSSFERIDFTFGRDAGVVVVKTVDPGSNAER
Ga0207670_116610552	3300025936	Switchgrass Rhizosphere	MRNSVLSKVLIGLATVAVVVGAFASFQRKRSSFERIDFTFRRNNGVIVVLKVD
Ga0207704_114645952	3300025938	Miscanthus Rhizosphere	MRRSLVANLLILTVTVAIVVGAFASFQRKRSSFERIDFTFRRENGTVVVKNVDPGGGAETAGLR
Ga0207639_112688872	3300026041	Corn Rhizosphere	MRRSVLSNVVIGLLTVAIIVGAFASFQRKRSSFERIDFTFRRNNGVIVVKTVDSGSGAEAAGLRP
Ga0207641_117976612	3300026088	Switchgrass Rhizosphere	MRRSLLSNVVIGLLTLAIIAGAFASFQRKRSSFERIDFTFRRNNGVIVVKTVDPGSGAGAAGLHPG
Ga0209059_11401501	3300026527	Soil	MRRSILTNALIGLLTVAIVIGAFASFQRKRSSFERIDFQFVRMNGIVVIKGVDPHSGAEAAGLRPGDQIWVIADTPTTEIQGLQKTLRRFGQT
Ga0209689_13076722	3300027748	Soil	MRRSIFSNLLILALTVAVVIGAFVSFQRKRSSFERIDFTFTRDNGVIVVKAVDPGSGAERAGL
Ga0209701_104988293	3300027862	Vadose Zone Soil	MRKSILANLAILALTAALVVGAFASFQRKRSSFERIDFTFTRRSGVIVVKSVDAESGAQQAGLR
Ga0247682_10317201	3300028146	Soil	MRRSLLANFVILAVTVAIVAGAFASFQRKRSSFERIDFTFTRDNGVVVVKVVDPGSGAEASGLRPGDQIW
Ga0307468_1011404872	3300031740	Hardwood Forest Soil	MRRSALANLVILAVTMAIVVGAFASFQRKRSSFERIDFTFTRGPNRIIVVLTVDPGSHADTAGLRPDDRILL
Ga0307475_113914111	3300031754	Hardwood Forest Soil	MRRSLFANLVILALTVAVVAGAFASFQRKRSSFERIDFTFTRDNGVVVVKDVDPNSGAEASGLRRGDQ
Ga0308173_115874101	3300032074	Soil	MRRSVLSNVVIGLLTVAIVAGAFASFQRKRSSFERIDFTFRRNNGVIVVKAVDPGSGAA
Ga0307471_1023111461	3300032180	Hardwood Forest Soil	MRKNIENVLILALTMALVVGAFASFQRKRSSFERIDFTFTRRSGVIVVKSVDPDSNAQRA
Ga0334929_087991_424_639	3300034135	Hypolithic Biocrust	MRRSRLVNVLIALLTLGVILGAFTSFQRKRSSFERIDFTFKRSNGIIVVKSVDEGSGAERAGLRPGDQIWLI

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092256

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences