NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F092252

Metagenome Family F092252

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F092252
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 69 residues
Representative Sequence MHIRRSSRWLVIGLPFCGVAAFAVLLAAQSADAPGDPLIAGFKSSYPASVSDAVELVTGKNGTMRYDM
Number of Associated Samples 89
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 98.11 %
% of genes near scaffold ends (potentially truncated) 99.07 %
% of genes from short scaffolds (< 2000 bps) 93.46 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (89.720 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil
(13.084 % of family members)
Environment Ontology (ENVO) Unclassified
(28.037 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(47.664 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 45.83%    β-sheet: 0.00%    Coil/Unstructured: 54.17%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF13378MR_MLE_C 5.61
PF00069Pkinase 4.67
PF02746MR_MLE_N 3.74
PF00474SSF 1.87
PF03551PadR 1.87
PF00215OMPdecase 0.93
PF07690MFS_1 0.93
PF01979Amidohydro_1 0.93
PF13474SnoaL_3 0.93
PF08450SGL 0.93
PF08308PEGA 0.93
PF07623Obsolete Pfam Family 0.93
PF00331Glyco_hydro_10 0.93
PF01738DLH 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 18.69
COG4948L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamilyCell wall/membrane/envelope biogenesis [M] 7.48
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 1.87
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 1.87
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 1.87
COG3386Sugar lactone lactonase YvrECarbohydrate transport and metabolism [G] 0.93
COG3391DNA-binding beta-propeller fold protein YncEGeneral function prediction only [R] 0.93
COG3693Endo-1,4-beta-xylanase, GH35 familyCarbohydrate transport and metabolism [G] 0.93

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms89.72 %
UnclassifiedrootN/A10.28 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_101506269All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300000956|JGI10216J12902_123966992All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300004114|Ga0062593_100645556All Organisms → cellular organisms → Bacteria1020Open in IMG/M
3300004156|Ga0062589_102902176All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M
3300004157|Ga0062590_100037368All Organisms → cellular organisms → Bacteria2546Open in IMG/M
3300004157|Ga0062590_101674317All Organisms → cellular organisms → Bacteria → Acidobacteria647Open in IMG/M
3300004157|Ga0062590_102317401All Organisms → cellular organisms → Bacteria → Acidobacteria565Open in IMG/M
3300004463|Ga0063356_100548592All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1545Open in IMG/M
3300004480|Ga0062592_100862142All Organisms → cellular organisms → Bacteria811Open in IMG/M
3300004480|Ga0062592_100945046All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300004643|Ga0062591_100769159All Organisms → cellular organisms → Bacteria → Acidobacteria883Open in IMG/M
3300004643|Ga0062591_101232385All Organisms → cellular organisms → Bacteria → Acidobacteria731Open in IMG/M
3300004643|Ga0062591_102826696All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium514Open in IMG/M
3300005093|Ga0062594_101882810All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia634Open in IMG/M
3300005293|Ga0065715_11059982Not Available528Open in IMG/M
3300005294|Ga0065705_10819618All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300005337|Ga0070682_101283700All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300005340|Ga0070689_101106351Not Available708Open in IMG/M
3300005343|Ga0070687_101493004All Organisms → cellular organisms → Bacteria → Acidobacteria508Open in IMG/M
3300005353|Ga0070669_101323943All Organisms → cellular organisms → Bacteria → Acidobacteria624Open in IMG/M
3300005364|Ga0070673_101530522Not Available629Open in IMG/M
3300005445|Ga0070708_101398385All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300005450|Ga0066682_10571669All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300005455|Ga0070663_101053907All Organisms → cellular organisms → Bacteria → Acidobacteria709Open in IMG/M
3300005456|Ga0070678_101779662All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300005535|Ga0070684_100436722All Organisms → cellular organisms → Bacteria1209Open in IMG/M
3300005718|Ga0068866_11030374All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300005844|Ga0068862_100945423All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium850Open in IMG/M
3300005844|Ga0068862_101793267All Organisms → cellular organisms → Bacteria → Acidobacteria623Open in IMG/M
3300006042|Ga0075368_10184694All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300006237|Ga0097621_101122547All Organisms → cellular organisms → Bacteria → Acidobacteria739Open in IMG/M
3300006755|Ga0079222_11875794All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300006844|Ga0075428_102073012All Organisms → cellular organisms → Bacteria → Acidobacteria589Open in IMG/M
3300006852|Ga0075433_10504617All Organisms → cellular organisms → Bacteria → Acidobacteria1065Open in IMG/M
3300006880|Ga0075429_100426915All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_65_91161Open in IMG/M
3300006881|Ga0068865_101608347All Organisms → cellular organisms → Bacteria → Acidobacteria584Open in IMG/M
3300007004|Ga0079218_13720607All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300009012|Ga0066710_103904097All Organisms → cellular organisms → Bacteria → Acidobacteria558Open in IMG/M
3300009094|Ga0111539_10512408All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1397Open in IMG/M
3300009094|Ga0111539_10819198All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_65_91083Open in IMG/M
3300009094|Ga0111539_12494119All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_65_9600Open in IMG/M
3300009157|Ga0105092_10972622Not Available504Open in IMG/M
3300009609|Ga0105347_1192586All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300010166|Ga0126306_10278589All Organisms → cellular organisms → Bacteria → Acidobacteria1283Open in IMG/M
3300011414|Ga0137442_1040193All Organisms → cellular organisms → Bacteria → Acidobacteria914Open in IMG/M
3300011421|Ga0137462_1012363All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1591Open in IMG/M
3300012360|Ga0137375_10168472All Organisms → cellular organisms → Bacteria2116Open in IMG/M
3300012532|Ga0137373_11229355All Organisms → cellular organisms → Bacteria → Acidobacteria527Open in IMG/M
3300012957|Ga0164303_10525068All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300012985|Ga0164308_10441814All Organisms → cellular organisms → Bacteria → Acidobacteria1074Open in IMG/M
3300012986|Ga0164304_10843260All Organisms → cellular organisms → Bacteria → Acidobacteria711Open in IMG/M
3300012988|Ga0164306_11542874Not Available571Open in IMG/M
3300014325|Ga0163163_10873411All Organisms → cellular organisms → Bacteria963Open in IMG/M
3300014745|Ga0157377_11091144All Organisms → cellular organisms → Bacteria → Acidobacteria611Open in IMG/M
3300015371|Ga0132258_10398798All Organisms → cellular organisms → Bacteria3417Open in IMG/M
3300015371|Ga0132258_10858433All Organisms → cellular organisms → Bacteria2291Open in IMG/M
3300015372|Ga0132256_100176428All Organisms → cellular organisms → Bacteria2168Open in IMG/M
3300015372|Ga0132256_102106671All Organisms → cellular organisms → Bacteria → Acidobacteria669Open in IMG/M
3300015372|Ga0132256_102762974All Organisms → cellular organisms → Bacteria → Acidobacteria590Open in IMG/M
3300015373|Ga0132257_100470901All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1537Open in IMG/M
3300015374|Ga0132255_103901789All Organisms → cellular organisms → Bacteria → Acidobacteria633Open in IMG/M
3300018028|Ga0184608_10230715All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300018054|Ga0184621_10230142All Organisms → cellular organisms → Bacteria → Acidobacteria663Open in IMG/M
3300018073|Ga0184624_10493259All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300018075|Ga0184632_10149171All Organisms → cellular organisms → Bacteria1031Open in IMG/M
3300018081|Ga0184625_10289725All Organisms → cellular organisms → Bacteria856Open in IMG/M
3300018469|Ga0190270_10502547All Organisms → cellular organisms → Bacteria → FCB group1156Open in IMG/M
3300018481|Ga0190271_11289845All Organisms → cellular organisms → Bacteria851Open in IMG/M
3300018481|Ga0190271_13074885All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300019362|Ga0173479_10639775All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300022213|Ga0224500_10345576Not Available538Open in IMG/M
3300025901|Ga0207688_10776899Not Available607Open in IMG/M
3300025903|Ga0207680_11191339Not Available543Open in IMG/M
3300025908|Ga0207643_11149625All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_65_9500Open in IMG/M
3300025918|Ga0207662_10862073All Organisms → cellular organisms → Bacteria → Acidobacteria640Open in IMG/M
3300025930|Ga0207701_11043357All Organisms → cellular organisms → Bacteria → Acidobacteria679Open in IMG/M
3300025931|Ga0207644_11179606All Organisms → cellular organisms → Bacteria → Acidobacteria644Open in IMG/M
3300025938|Ga0207704_10304427All Organisms → cellular organisms → Bacteria → Acidobacteria1222Open in IMG/M
3300025986|Ga0207658_11270263All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300027866|Ga0209813_10174742All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300027909|Ga0209382_10117136All Organisms → cellular organisms → Bacteria3109Open in IMG/M
3300027909|Ga0209382_10935248All Organisms → cellular organisms → Bacteria → Acidobacteria909Open in IMG/M
3300028381|Ga0268264_12428776Not Available530Open in IMG/M
3300028814|Ga0307302_10678591All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300028819|Ga0307296_10096421All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1583Open in IMG/M
3300028881|Ga0307277_10129366All Organisms → cellular organisms → Bacteria → Acidobacteria1087Open in IMG/M
3300031226|Ga0307497_10210050All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300031455|Ga0307505_10263557All Organisms → cellular organisms → Bacteria803Open in IMG/M
3300031538|Ga0310888_10264256All Organisms → cellular organisms → Bacteria → Acidobacteria971Open in IMG/M
3300031538|Ga0310888_10378415All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300031538|Ga0310888_10515503All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300031538|Ga0310888_10986578All Organisms → cellular organisms → Bacteria → Acidobacteria529Open in IMG/M
3300031547|Ga0310887_10093280All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_65_91474Open in IMG/M
3300031562|Ga0310886_10429919All Organisms → cellular organisms → Bacteria → Acidobacteria784Open in IMG/M
3300031731|Ga0307405_10551948All Organisms → cellular organisms → Bacteria → Acidobacteria932Open in IMG/M
3300031854|Ga0310904_10140532All Organisms → cellular organisms → Bacteria → Acidobacteria1390Open in IMG/M
3300031854|Ga0310904_10984219All Organisms → cellular organisms → Bacteria → Acidobacteria600Open in IMG/M
3300031911|Ga0307412_10593648All Organisms → cellular organisms → Bacteria937Open in IMG/M
3300031944|Ga0310884_10149564All Organisms → cellular organisms → Bacteria → Acidobacteria1203Open in IMG/M
3300031944|Ga0310884_10548792All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300032012|Ga0310902_10890198All Organisms → cellular organisms → Bacteria → Acidobacteria612Open in IMG/M
3300032017|Ga0310899_10286803All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300032122|Ga0310895_10080867All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_65_91278Open in IMG/M
3300033407|Ga0214472_11099217All Organisms → cellular organisms → Bacteria → Acidobacteria698Open in IMG/M
3300033408|Ga0316605_11887946Not Available581Open in IMG/M
3300033550|Ga0247829_11257016All Organisms → cellular organisms → Bacteria613Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil13.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.15%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil10.28%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere8.41%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.67%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.67%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.74%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.80%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.80%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere2.80%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.87%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.87%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.87%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.87%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.87%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.93%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.93%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.93%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.93%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.93%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.93%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006042Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009609Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300011414Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2EnvironmentalOpen in IMG/M
3300011421Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2EnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300022213Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_4_1EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027866Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031455Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_SEnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300033408Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCTEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10150626923300000364SoilMHTRRPIRLLLIALPLCAAATAAVLFAAQGGESPGDPLIAGFKSTYPASVSDAVELV
JGI10216J12902_12396699223300000956SoilMNSRRSSRSLVIALPLVAVAALAALGAAQNREEQGDPLIAGFKSTYPASVSDAVELVTGKNGTMRY
Ga0062593_10064555613300004114SoilMHTRRSFRLLMIALPFCVAATVAVLRAAQGADTAGDPLIAGFKSTYPASVSDAVELVTGKNGTMRYDMKLMTGANVV
Ga0062589_10290217623300004156SoilMHIRRSFRLLGIGLPFCGAAAFAVLLAAQTPDTPGDPLIAGFKSTYPASVSDAVELVTGKNGTMRYDMKLMTGANL
Ga0062590_10003736843300004157SoilMYTHRSFRLLGIGLPICGAAAFAVLLTAQSADAPGDPLIAGFKSTYPASVSDAVELVTGKNGTMRYDMKLM
Ga0062590_10167431723300004157SoilMHIRRVSRSVVIGVPLVGAAAFVVLGAAQTPAPPGDPLIAGFKSTYAASVSDAVEIVTGRNGTMRYDMKLMAGTNLV
Ga0062590_10231740123300004157SoilMHIRRSFRPLAIALPFCAAATVAVLLAAQGADAPGDQLVAGFKSTYPASVSDAVELVTGKNGTMRYDMKLM
Ga0063356_10054859233300004463Arabidopsis Thaliana RhizosphereMHIRRPFGPLVIALLFCAAAAAALFAAQGADPAGDPLVAGFKGTYPASVSDAVELVTGKNGTM
Ga0062592_10086214223300004480SoilMNIRRPVRSLLIALPLVGAATLGLRGVGQAPADSGDPLIAGFKSTYPASVSDAVEIVTGKNGTMRYDMKLMAG
Ga0062592_10094504623300004480SoilMNIRRACRSLVIGLPLVGAAIVALAAAQNPEAPGDPLIAGFKSTYPASVSDAVELVTGKNGTM
Ga0062591_10076915923300004643SoilMHTRRSLRLLVIALPICTVATVAVLVAAQSADTTGDPLVAGFKSTYPASVSDAVELVTGKNGTMRYDMK
Ga0062591_10123238513300004643SoilMDTRRSFRLLAIALPFGVAAIAVLLAAQGADTPGDPLLAGFKSTYPASVSDAVELVTGKNGTMRYDMKL
Ga0062591_10282669623300004643SoilMARSLSRRIALIVVPLGVVVALSMTAQRPSAQTDQLIEGFKKTYPASVSDAVELVTGKNGSMGHDMKQ
Ga0062594_10188281023300005093SoilMQIRRSSRSLVITLPLVGIAAFVALGATQSPEAPGDPLIAGFKSTYPASVSDAVELVTGKNGTMRYDMKLMTGANL
Ga0065715_1105998223300005293Miscanthus RhizospherePMHTRLSLRPLVIALPFCTVATVAVLVAAQSADTPGDTFAGFKSTYPASVSDAVELVTGKNGDDAL*
Ga0065705_1081961813300005294Switchgrass RhizosphereMRTRRSFRLLMIAVPFCAAAMVAVLFAAQGADAPGDPLVAGFKSTYPASVSDAVELVTGKNGTMR
Ga0070682_10128370013300005337Corn RhizosphereMSIHPAFRRLIVAVPLVGVVVFVGLGRAQTPEAPGDPLIAGFKSTYPASVSDAVELVTGKNGTM
Ga0070689_10110635113300005340Switchgrass RhizosphereMTILNLSRSSRWLILALALVLAGVVVVRGAAPTTPPAAAGDPLIAGFKSTYAASVSDAVELVTGKNGTMRYDMKLMAGSNLV
Ga0070687_10149300423300005343Switchgrass RhizosphereMHTRRSFRLLMIALPFCVAATVAVLRAAQGADTAGDPLIAGFKSTYPASVSDAVELVTGKNGTMRYDM
Ga0070669_10132394313300005353Switchgrass RhizosphereMHTRRSFRQLAIVLPFCAAATVAVLLAAQAADPQGDPLVAGFKSTYPASVSDAVELVTGKNGTMRYDMKLMTGANV
Ga0070673_10153052213300005364Switchgrass RhizosphereMSIHPAFRRLIVAVPLVGVVVFVGLGRAQTPEAPGDPLIAGFKSTYPASVSDAVELVTGKNGTMRYDMK
Ga0070708_10139838513300005445Corn, Switchgrass And Miscanthus RhizosphereMHTRALFRRLAIALPFGAAGALAVLLAAQGGDAPGDPLVAGFKSTYPASVSDAVEL
Ga0066682_1057166913300005450SoilMHIRRSFRLLLIAVPFCTAAAVAVLFAAQGAETPGDPLVAGFKSTYPASVSDAVELV
Ga0070663_10105390723300005455Corn RhizosphereMNLRRISRLVVIGVPLVGAAAFAAVGAAQTPAAPGDPLIAGFKSTYAASVSDAVEIVTGRNGTMRYDMKL
Ga0070678_10177966213300005456Miscanthus RhizosphereMNLRRISRLVFIGVPLVGAAAFAAVGAAQTPAAPGDPLIAGFKSTYAASVSDAVEIVTGRNGT
Ga0070684_10043672233300005535Corn RhizosphereMNLRRLARALVIGLPLAGGATLVAIAATQTPGASASPGDPLIAGFKSTYAASVSDAVEIVTGKNGTMRSDMKLMAGTNMVGRAV
Ga0068866_1103037413300005718Miscanthus RhizosphereMNLRRISRLVVIGVPLVGAAAFAAVGAAQTPAAPGDPLIAGFKSTYAASVSDAVEIVTGRNGTMRYDM
Ga0068862_10094542333300005844Switchgrass RhizosphereMHSHRSLRLLVIGLSLCGAAACAALLAAQSVDAPGDALIAGFKSTYPASVSDAVELVTGKNGTM
Ga0068862_10179326723300005844Switchgrass RhizosphereMHTRRSFRLLTIALPFCAAATVAVLLAAQGADPQGDPLVAGFKSTYPASVSDAVELVTGKNGTMRYDMKLMTG
Ga0075368_1018469423300006042Populus EndosphereMHTRRLFHLLVIALPVCAAAVLLAAQATEPAGDALIAGFKSTYPASVSDAVELVTGKNGT
Ga0097621_10112254713300006237Miscanthus RhizosphereMHIRRSSRWLVIGLPFCGAAAFAVLLAAQSADAPGDPLIAGFKSSYPASVSDAVELVTGKSGTMRYDMARMTGSNVV
Ga0079222_1187579423300006755Agricultural SoilMHMRHASRLLTIAFLFVASLTLVALGRAQNREEQGDPLIAGFKSTYAASVSDAVELVTGRNGT
Ga0075428_10207301223300006844Populus RhizosphereMHTRHSFRLLMIALPFCAAAMVAVLFAAQGADAPGDPLVAGFKGTYPASVSDAVELVTGKNGTMRYDMKLMTGAN
Ga0075433_1050461733300006852Populus RhizosphereMHTRRLFHLLVIALPVCAAAVLFAAQATEPAGDALIAGFKSTYPASVSDAVELVT
Ga0075434_10107012913300006871Populus RhizosphereMHTRRSFRLLMIALPFCVAATVAVLRAAQGADTGGDPLIAGFKSTYPASVSD
Ga0075429_10042691523300006880Populus RhizosphereMNIRRSSRSLVIGLPLLGAAIVALGAAQSPEAPGDALIAGFKSTYPASVSDAVELVTGKNGTMRYDMKLMTG
Ga0068865_10160834723300006881Miscanthus RhizosphereMHTLRSFRPLAIALPFGAAATVAVLLAAQGADTPGDPLVAGFKSTYPASVSDAVELVTGKNG
Ga0079218_1372060723300007004Agricultural SoilMNIRRSRSILVAVPLLAAATLGSRGVQDPPSGDPLIAGFKGTYPASVADAVELVTGKNGAMRYDMKLM
Ga0066710_10390409713300009012Grasslands SoilMHIRRSFRLLLIALPFCTAAAVAVLFAAQGADTPGDPLVAGFKSTYPASVSDAVELVTGKNGTMRYDMKQMTGAN
Ga0111539_1051240813300009094Populus RhizosphereMQIRRSSRSLVMTLPLVGVAAFVALGATQSPEAPGDPLIAGFKSTYPASVSDAVELVTGKNGTMRYDMKLMTGAN
Ga0111539_1081919823300009094Populus RhizosphereMTIRRAFRSLAIGLPLVAAAIVALAAAQNPEAPGDPLIAGFKSTYPASVSDAVELVTGKNGTMRYDMK
Ga0111539_1249411923300009094Populus RhizosphereMKIRRAFRSLVIGLPLVAAALVALAAAQNPEAPGDPLIASFKSTYPASVSDAVELVTGKNGTMRYDMKLMTGT
Ga0105092_1097262223300009157Freshwater SedimentMNIRRSSRTLVIASLIVGAAAFVAPGAAQNPEAPGDPLIAGFKSTYPASVSDAVELVTGRNGTMRHDMKLMTGANLVGRAV
Ga0105347_119258623300009609SoilMNIRRPSRSLLIALPLVAAATLGLRGVAQDPAAGDPLIAGFKSTYPASVSDAVELVTGKTGTMRHDMKLMTGTN
Ga0126306_1027858933300010166Serpentine SoilMNSRRSFRSLVMALPLVAGSAFLALGAAQNREEQGDPLIAGFKSTDAASVSDAVELVTGKSGTMPYD
Ga0137442_104019323300011414SoilMHTRASFRPLAIALPFCAAATVAVLLAAQGAETPGDPLVAGFKSTYPASVSDAVELVTGKNGTMRYDMKLMTGAN
Ga0137462_101236313300011421SoilMIIRRVSRSLAIASLIAPLGLAAAFVALGAAQNPEAPGDALVAGFKSTYAASVSDAVELVTGR
Ga0137375_1016847213300012360Vadose Zone SoilMHTRRSFRLFAIALPFCAAATVAVLFAAQGADTPGDPLVAGFKSTYPASVSDAVELVTGKNGTMRYDMKLMTG
Ga0137373_1122935513300012532Vadose Zone SoilMHIRRSFRLLLIAVPFFTVAAVAVLLAAQGADAPGDPLVAGFKSTYPASVSDAVELVTGKNGTMRYDMKLMTGA
Ga0164303_1052506813300012957SoilMHTRRSLRLLVIALPLCTVAMVAVLFAAQSADTTGDPLVAGFKSTYPASVSDAVELVTGKNGTMRYD
Ga0164308_1044181433300012985SoilMHIRRSSRWLVIGLAFCGAAAFAVLLAAQSADAPGDPLIAGFKSSYPASVSDAVELVTGKNGTMRYDMARM
Ga0164304_1084326013300012986SoilMHIRRSSRWLVIGLPFCGAAAFAVLLAAQSADAPGDPLIAGFKSSYPASVSDAVELVTGKNGTMRYDMARMTGSNVVGRA
Ga0164306_1154287423300012988SoilMQIRRSSRWPVIGLPYCGAAAFAVLLAAQSADAPGDPLIAGFKSSYPASVSDAVELVTGKNGTMRYDMARM
Ga0163163_1087341113300014325Switchgrass RhizosphereMRAAADGRRGYVTIPALKGATVMNLRRISRSVVIGVPLVGAAAFAAVGAAQPPAAPGDPLIAGFKSTYAASVSDAVEIVTGRNGTMRYDMK
Ga0157377_1109114413300014745Miscanthus RhizosphereMNLRRLARALVIGLPLAGGATLVAIAATQTPGASASPGDPLIAGFKSTYAASVSDAVEIVTGKNGTMRSD
Ga0132258_1039879813300015371Arabidopsis RhizosphereMPTRRSFRLLVIALPFCTAAMVAVLLAAQGTDTAGDPLVAGFKSTYPASVSDAVELVTGKNGTMRYDMKLMTGANMTG
Ga0132258_1085843313300015371Arabidopsis RhizosphereMKIRRAFRSLVIGLPLVAAAIVALAAAQNPDAPGDPLIASFKSTYPASVSDAVELVTGKNGTMRY
Ga0132256_10017642833300015372Arabidopsis RhizosphereMKIRRAFRSLVIGLPLVAAAIVALAAAQNAETPGDPLIASFKSTYPASVSDAVELV
Ga0132256_10210667113300015372Arabidopsis RhizosphereMNLGRLARALVIGLPLAGGATFAVSGAAQTPAAPASPGDPLIAGFKSTYAASVSDAVEIVTGKNGTMRYDMKLMAGTNLVGRAVTSL
Ga0132256_10276297423300015372Arabidopsis RhizosphereMNLRRLARALVIGLPLAGGATLVAIAATQTPGASPSPGDPLIAGFKSTYAASVSDAVEIVTGKNGTMRSDM
Ga0132257_10047090113300015373Arabidopsis RhizosphereMPTRRSFRLLVIALPFCTAAMVAVLLAAQGTDTAGDPLVAGFKSTYPASVSDAVELVTGKNGTMRYDMKLMAGTNLV
Ga0132255_10390178913300015374Arabidopsis RhizosphereMHTSRSFRLLMIALPFCVAATVAVLRAAQGADTVGDPLVAGFKSTYPASVSDAVELVTGKNGTMRYDMKL
Ga0184608_1023071523300018028Groundwater SedimentMHTRALFRRLAIALPFGAAATVALLLAAQGADTAGDPLVAGFKSTYPASVSDAVELV
Ga0184621_1023014223300018054Groundwater SedimentMHTRRSLRQLVIALPFCTVATVAVLLAAQGADTPGDSLVAGFKSTYPASVSDAVELV
Ga0184624_1049325913300018073Groundwater SedimentMTIRRFSHSVVIGVPLVGAVAFVALGAAQTPDAPGDPLIAAFKSTYAASVSDAVEIVTGRSGTMRYD
Ga0184632_1014917113300018075Groundwater SedimentMHTRRSFRPLAITLPFCVAATVAVLLAAQGADTPGDPLVAGFKSTYPASVSDAVELVTGKNGTMRYDMKL
Ga0184625_1028972513300018081Groundwater SedimentMNLRRISRSVVIGVPLVGAAQTPAAPGDPLIAGFKSTYAASVSDAVEIVTGRNGTMRYDMKL
Ga0190270_1050254733300018469SoilMPCRVSVRPFLIALLIVIAAFAAARAAQDATPSGDPLIAGFKSTYAASVSDAVELVTGKNGTMRY
Ga0190271_1128984523300018481SoilMQIRRSSRSLVMTLPLAGVAAFVALGATQSPEAPGDPLIAGFKSTYPASVSDAVELVTGKNGT
Ga0190271_1307488513300018481SoilMHFHPFRSWSIAGLIVTAAMVAARAAQDPAPPGDPLIAGFKSTYAASVSDAVELVTGKNGTMRYDMKLMT
Ga0173479_1063977513300019362SoilMPRRRPVRLLLIALPLGAAVTAAMLVAAQGGESPGDPLIAGFKSTYPASVSDAVELVTGRNGTMRY
Ga0224500_1034557613300022213SedimentMMIRRLSRSLVIAPLIAPVGLAAAFVALGAAQNQDAPGDALVAGFKSTYPASVSDAVELVTGKN
Ga0207688_1077689923300025901Corn, Switchgrass And Miscanthus RhizosphereMNLGRLARALVIGLPLAGGATFAVSGAAQTPAAPASPGDPLIAGFKSTYAASVSDAVEIVTGKNGTMRSDMK
Ga0207680_1119133913300025903Switchgrass RhizosphereMHIRRSSRWLVIGLPFCGVAAFAVLLAAQSADAPGDPLIAGFKSSYPASVSDAVELVTGKNGTMRYDM
Ga0207643_1114962523300025908Miscanthus RhizosphereMKIRRAFRSLVIGLPLVAAAIVALAAAQNPEAPGDPLIASFKSTYPASVSDAVELVTGKNGTMRYDMKLM
Ga0207662_1086207323300025918Switchgrass RhizosphereMHTRRSFRLLMIALPFCVAATVAVLRAAQGADTAGDPLIAGFKSTYPASVSDAVELVTGKNGTMRYDMK
Ga0207701_1104335723300025930Corn, Switchgrass And Miscanthus RhizosphereMNIRRISRSVVIGMPLVGAAAFAAVGAAQPPAAPGDPLIAGFKSTYAASVSDAVEIVTGRNGTMRYDMKLMAGT
Ga0207644_1117960613300025931Switchgrass RhizosphereMHIRRSSRWLVIGLPFCGVAAFAVLLAAQSADAPGDPLIAGFKSSYPASVSDAVELVTGKSGTMRYDMA
Ga0207704_1030442713300025938Miscanthus RhizosphereMHIRRSSRWLVIGLPFCGVAAFAVLLAAQSADAPGDPLIAGFKSSYPASVSDAVELVTGK
Ga0207658_1127026323300025986Switchgrass RhizosphereMHSRHSRRLLLIGLSFCLAAVAALVAAQSPDAPGDALIAGFKSTYPASVSDAVELVTG
Ga0209813_1017474223300027866Populus EndosphereMHTRRLFHLLVIALPVCAAAVLLAAQATEPAGDALIAGFKSTYPASVSDAVELVTGKNGTMRYDMKLM
Ga0209382_1011713613300027909Populus RhizosphereMDIRRSSRSLVIALLIIGAAAFVAAGAAQDLTSPGDPLIAGFKSTYAASVSDAVELVTGKNG
Ga0209382_1093524813300027909Populus RhizosphereMNIHRSPRSFVIRLTLSGVAALVALGAVQTPASPGDPLIAGFKSTYAASVSDAVELVTG
Ga0268264_1242877613300028381Switchgrass RhizosphereMPAGYYTGHQPKGVTAMSIRRSSRSLVIALFIIGAAALAAVGASRRQETPGDPLIAGFKSTYAASVSDAVELVTGKNGTMRYDMKLMAGTN
Ga0307302_1067859113300028814SoilMHTRRSFRPLVITLPFCAAATVAVLLAAQGADTPGDSLVAGFKSTYPASVSDAVE
Ga0307296_1009642113300028819SoilMHTRLPRRLLVIVLLFCAVATVAALVAAQSPDTTGDPLVAAFKSTYPASVSDAVELVTGKNGT
Ga0307277_1012936633300028881SoilMHTRRSLRLLVIALPFCTVAMVAVLVAAQSADTTGDPLVAGFKSTYPASVSDAVELVTGKNGTMRYDM
Ga0307497_1021005013300031226SoilMHIRRVSRSIVIGIPLVGAAAVVVLGAAQTPAPPGDPLIAGFKSTYAASVSDAVEIVTGRNGTMRYDMKLMAG
Ga0307505_1026355713300031455SoilMFRTARRRPVALSLVVAPVVALLTLGAAQSTPTEGDPLIAGFKSTYAASVSDAVELVTGRNGAMRH
Ga0310888_1026425633300031538SoilMTIGRVARSLVIVLPLVALAVVVLGAAQSSEAPGDPLIAGFKSTYPASVSDAVELVTGKNGTM
Ga0310888_1037841513300031538SoilMQIRRSSRSLVMTLPLVGIAAFVALGATQSPEAPGDPLIAGFKSTYPASVSDAVELVTGRNGTMRYDMKLMTGAN
Ga0310888_1051550323300031538SoilMQTLRSFRLQAAALSFCAAVSVAVLFAAQGADPQGDPLVAGFKSTYPASVSDAVELVTGKNGTMRYDMKLMTGANVV
Ga0310888_1098657823300031538SoilMTIRRFSHSVVIGVPLVGAVAFVALGAAQTPDASGDPLIGAFKSTYAASVSDAVEIVTGRSGTMRYDMKLMAG
Ga0310887_1009328023300031547SoilMKIRRAFRSLVIGLPLVAAAIVALAAAQNPEAPGDPLIASFKSTYPASVSDAVELVTG
Ga0310886_1042991923300031562SoilMNIRRSSRSLVLGVPLLGVAIVALAAAQNPEAPPGDPLIAGFKSTYPASVSDAVELVTGK
Ga0307405_1055194813300031731RhizosphereMDIRRSSRSLVLGLPLLGAVIVALGAAQNSEAPGDPLIAGFKSTYPASVSDAVELVTGKNGTMRYDM
Ga0310904_1014053233300031854SoilMTIGRVARSLVIVLPLVALAVVVLGAAQSSEAPGDPLIAGFKSTYPASVSDAVELVTGKNGTMRY
Ga0310904_1098421923300031854SoilMPIRRLFRPLAIALPFAAATVAVLLAAQGADAPGDPLIAGFKSTYPASVSDAVELVTGKNGTM
Ga0307412_1059364823300031911RhizosphereMKMRRSSRSLVIALPFVGASALVALGAAQSRDDPGDALIAGFKNTYAASVSDAVELVTGRSGTMRHDMKLMAG
Ga0310884_1014956433300031944SoilMNIRRSSRSLVLGVPLLGVAIVALAAAQNPEAPPGDPLIAGFKSTYPASVSDAVELVTGKNGTMRYDMKLMTGANLVGRAVT
Ga0310884_1054879223300031944SoilMQIRRSSRSLVMTLPLVGIAAFVATQSPEAPGDPLIAGFKSTYPASVSDAVELVTGRNGTMRY
Ga0310902_1089019823300032012SoilMNIRRFSRSVVIGVPFVAAVGFVALGAAQTPEAPGDPLIAAFKSTYAASVSDAVEIVTGRNG
Ga0310899_1028680313300032017SoilMPIRRLFRPLAIALPFAAATVAVLLAAQGADAPGDPLIAGFKSTYPASVSDAVELVTGKNGTMRYDMKLMTGANLVG
Ga0310895_1008086713300032122SoilMKIRRAFRSLVIGLPLVAAAIVALAAAQNPEAPGDPLIASFKSTYPASVSDAVELVTGM
Ga0214472_1109921713300033407SoilMTIRRSSRSLVLGLPLVSAAAFVALGAAQNPAEPGDPLIAGFKSTYAASVSDAVELVTGRNGTMRYDMKLMTGANL
Ga0316605_1188794613300033408SoilMPIPRPLRSLVIGLTLVLAAAVAALGTAQPPPPGDPLIAGFKSTYAASVSDAVELVTGRVGTMRHDMKLMTGTNLVGRAVTAIARTVPAAEATPTLS
Ga0247829_1125701623300033550SoilMQIRRSSRSLVLALPLVGIAAFVALGATQSPEAPGDPLIAGFKSTYPASVSDAVELVTGKNGTMRYDMKLMTGANL

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.