NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F092148

Metagenome Family F092148

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092148
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 53 residues
Representative Sequence MNNNKKREDLSDKIKTALDKAIKNVIAETKAKNSYLVIADKKGNIKKIPAKDL
Number of Associated Samples 102
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 7.48 %
% of genes near scaffold ends (potentially truncated) 12.15 %
% of genes from short scaffolds (< 2000 bps) 71.96 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (79.439 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere
(7.477 % of family members)
Environment Ontology (ENVO) Unclassified
(34.579 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(26.168 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 29.63%    β-sheet: 12.35%    Coil/Unstructured: 58.02%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF06414Zeta_toxin 25.23
PF02780Transketolase_C 12.15
PF00155Aminotran_1_2 3.74
PF01261AP_endonuc_2 3.74
PF00294PfkB 1.87
PF07969Amidohydro_3 1.87
PF12679ABC2_membrane_2 1.87
PF13715CarbopepD_reg_2 1.87
PF04020Phage_holin_4_2 0.93
PF13366PDDEXK_3 0.93
PF07726AAA_3 0.93
PF01255Prenyltransf 0.93
PF00408PGM_PMM_IV 0.93
PF01128IspD 0.93
PF04916Phospholip_B 0.93
PF14903WG_beta_rep 0.93
PF00486Trans_reg_C 0.93
PF00535Glycos_transf_2 0.93
PF02163Peptidase_M50 0.93
PF00892EamA 0.93
PF02910Succ_DH_flav_C 0.93
PF14493HTH_40 0.93
PF00034Cytochrom_C 0.93
PF01979Amidohydro_1 0.93
PF01804Penicil_amidase 0.93
PF01642MM_CoA_mutase 0.93
PF00072Response_reg 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0020Undecaprenyl pyrophosphate synthaseLipid transport and metabolism [I] 0.93
COG0033Phosphoglucomutase/phosphomannomutaseCarbohydrate transport and metabolism [G] 0.93
COG0746Molybdopterin-guanine dinucleotide biosynthesis protein ACoenzyme transport and metabolism [H] 0.93
COG1109PhosphomannomutaseCarbohydrate transport and metabolism [G] 0.93
COG1207Bifunctional protein GlmU, N-acetylglucosamine-1-phosphate-uridyltransferase/glucosamine-1-phosphate-acetyltransferaseCell wall/membrane/envelope biogenesis [M] 0.93
COG12112-C-methyl-D-erythritol 4-phosphate cytidylyltransferaseLipid transport and metabolism [I] 0.93
COG1884Methylmalonyl-CoA mutase, N-terminal domain/subunitLipid transport and metabolism [I] 0.93
COG1950Uncharacterized membrane protein YvlD, DUF360 familyFunction unknown [S] 0.93
COG2068CTP:molybdopterin cytidylyltransferase MocACoenzyme transport and metabolism [H] 0.93
COG2366Acyl-homoserine lactone (AHL) acylase PvdQSecondary metabolites biosynthesis, transport and catabolism [Q] 0.93

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms80.37 %
UnclassifiedrootN/A19.63 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002100|JGI24809J26612_1003611All Organisms → cellular organisms → Bacteria4622Open in IMG/M
3300004778|Ga0062383_10279974All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes795Open in IMG/M
3300004778|Ga0062383_10573813All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes570Open in IMG/M
3300005205|Ga0068999_10094610All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes587Open in IMG/M
3300005328|Ga0070676_10596196All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes796Open in IMG/M
3300005331|Ga0070670_100050547All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae3572Open in IMG/M
3300005334|Ga0068869_100138127All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae1879Open in IMG/M
3300005338|Ga0068868_100266772All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1445Open in IMG/M
3300005340|Ga0070689_100150661All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1876Open in IMG/M
3300005364|Ga0070673_100411450All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1211Open in IMG/M
3300005367|Ga0070667_100296416All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1455Open in IMG/M
3300005466|Ga0070685_11488198All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales521Open in IMG/M
3300005487|Ga0074211_122485All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes819Open in IMG/M
3300005548|Ga0070665_100564153All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1151Open in IMG/M
3300005719|Ga0068861_100517095All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1082Open in IMG/M
3300005844|Ga0068862_102666958All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes511Open in IMG/M
3300005943|Ga0073926_10013124All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1482Open in IMG/M
3300005955|Ga0073922_1006715All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1319Open in IMG/M
3300006358|Ga0068871_100163436All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1905Open in IMG/M
3300006918|Ga0079216_10699942All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae722Open in IMG/M
3300006918|Ga0079216_11992644All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes504Open in IMG/M
3300007004|Ga0079218_12420261All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes618Open in IMG/M
3300007790|Ga0105679_10568629All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1058Open in IMG/M
3300007799|Ga0105049_10483863Not Available928Open in IMG/M
3300009083|Ga0105047_10460411All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1224Open in IMG/M
3300009151|Ga0114962_10139293All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum1469Open in IMG/M
3300009430|Ga0114938_1000035All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes106579Open in IMG/M
3300009455|Ga0114939_10013018All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes4217Open in IMG/M
3300009695|Ga0123337_10181832All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1150Open in IMG/M
3300009710|Ga0116192_1177472Not Available694Open in IMG/M
3300009716|Ga0116191_1100185All Organisms → cellular organisms → Bacteria1280Open in IMG/M
3300009768|Ga0116193_1087406All Organisms → cellular organisms → Bacteria1454Open in IMG/M
3300009787|Ga0116226_10595778Not Available1107Open in IMG/M
3300009873|Ga0131077_10002349All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes50053Open in IMG/M
3300009873|Ga0131077_10087744All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes3870Open in IMG/M
3300010348|Ga0116255_10741246All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes621Open in IMG/M
3300010351|Ga0116248_10229664All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales1490Open in IMG/M
3300011264|Ga0151623_1011748Not Available960Open in IMG/M
3300012044|Ga0136636_10340188All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300012045|Ga0136623_10023408All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2644Open in IMG/M
3300012046|Ga0136634_10022661All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae2152Open in IMG/M
3300012093|Ga0136632_10527167Not Available522Open in IMG/M
3300012530|Ga0136635_10024831All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1776Open in IMG/M
3300012533|Ga0138256_10042103All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes4649Open in IMG/M
3300012943|Ga0164241_11265927All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes545Open in IMG/M
3300013097|Ga0136639_10081811All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1267Open in IMG/M
3300013296|Ga0157374_10123986All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2496Open in IMG/M
3300013308|Ga0157375_13435503All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium527Open in IMG/M
3300013772|Ga0120158_10362421All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes678Open in IMG/M
3300015194|Ga0167666_1031635All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1386Open in IMG/M
3300015198|Ga0167625_1029689All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1914Open in IMG/M
3300017787|Ga0183260_10833914All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300018059|Ga0184615_10027594All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae3137Open in IMG/M
3300018084|Ga0184629_10344779Not Available784Open in IMG/M
3300018906|Ga0193609_1042226All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1436Open in IMG/M
3300019487|Ga0187893_10002338All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes41971Open in IMG/M
3300020021|Ga0193726_1136602All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1079Open in IMG/M
3300020027|Ga0193752_1138822All Organisms → cellular organisms → Bacteria → FCB group963Open in IMG/M
3300020034|Ga0193753_10002562All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes14177Open in IMG/M
3300020034|Ga0193753_10013170All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes5140Open in IMG/M
3300021090|Ga0210377_10053218All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2795Open in IMG/M
3300021168|Ga0210406_10000018All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes270436Open in IMG/M
3300021363|Ga0193699_10249228All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes739Open in IMG/M
3300021474|Ga0210390_10392515All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1173Open in IMG/M
3300021976|Ga0193742_1093192All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1080Open in IMG/M
3300022561|Ga0212090_10145748All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2135Open in IMG/M
3300023171|Ga0247813_10111767All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1089Open in IMG/M
3300023194|Ga0256612_1281879Not Available998Open in IMG/M
3300024288|Ga0179589_10464080All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium585Open in IMG/M
3300024304|Ga0233391_1009446Not Available509Open in IMG/M
3300025106|Ga0209398_1000002All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae565064Open in IMG/M
3300025130|Ga0209594_1026293All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2025Open in IMG/M
3300025130|Ga0209594_1051045All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1331Open in IMG/M
3300025691|Ga0208826_1063220All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1219Open in IMG/M
3300025900|Ga0207710_10004303All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales6232Open in IMG/M
3300025903|Ga0207680_10000048All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae58651Open in IMG/M
3300025904|Ga0207647_10136177All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1441Open in IMG/M
3300025925|Ga0207650_11364399Not Available603Open in IMG/M
3300025942|Ga0207689_10294806All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1344Open in IMG/M
3300025960|Ga0207651_10263257Not Available1417Open in IMG/M
3300025961|Ga0207712_10061096All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2673Open in IMG/M
3300025973|Ga0210145_1034492Not Available588Open in IMG/M
3300026035|Ga0207703_11910462All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300026041|Ga0207639_11831830All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria568Open in IMG/M
3300026088|Ga0207641_10133954All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2228Open in IMG/M
3300026118|Ga0207675_100012993All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes7771Open in IMG/M
3300026931|Ga0209850_1006485Not Available1000Open in IMG/M
3300027393|Ga0209867_1022481All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes908Open in IMG/M
3300027778|Ga0209464_10271488Not Available614Open in IMG/M
3300027802|Ga0209476_10215596Not Available869Open in IMG/M
3300027831|Ga0209797_10218820Not Available806Open in IMG/M
3300027840|Ga0209683_10219870Not Available873Open in IMG/M
3300027843|Ga0209798_10225843All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Ferruginibacter → unclassified Ferruginibacter → Ferruginibacter sp.916Open in IMG/M
3300028379|Ga0268266_10348049Not Available1392Open in IMG/M
3300028664|Ga0302164_10182309All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes574Open in IMG/M
3300028800|Ga0265338_10064621All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Sediminibacterium3181Open in IMG/M
(restricted) 3300031150|Ga0255311_1077014All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes712Open in IMG/M
(restricted) 3300031197|Ga0255310_10018912All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1774Open in IMG/M
3300031344|Ga0265316_10066689All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Sediminibacterium2785Open in IMG/M
3300031507|Ga0307509_10160310All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2148Open in IMG/M
3300031834|Ga0315290_11606298Not Available525Open in IMG/M
3300031939|Ga0308174_10913073All Organisms → cellular organisms → Bacteria742Open in IMG/M
3300032004|Ga0307414_10365441Not Available1243Open in IMG/M
3300032420|Ga0335397_10348963All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1278Open in IMG/M
3300034013|Ga0334991_0004883All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae9759Open in IMG/M
3300034157|Ga0370506_005871Not Available2485Open in IMG/M
3300034170|Ga0370487_0007774Not Available2847Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere7.48%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand6.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.54%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment5.61%
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge5.61%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater4.67%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.67%
SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sand3.74%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater2.80%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.80%
Glacier ValleyEnvironmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley1.87%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.87%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.87%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil1.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.87%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.87%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.87%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil1.87%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.87%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.87%
WastewaterEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater1.87%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.93%
SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Sediment0.93%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.93%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.93%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.93%
SedimentEnvironmental → Aquatic → Freshwater → Groundwater → Acid Mine Drainage → Sediment0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.93%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.93%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.93%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment0.93%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.93%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.93%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.93%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.93%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.93%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.93%
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated0.93%
Activated SludgeEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge0.93%
Activated SludgeEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge0.93%
Active SludgeEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002100Soil microbial communities from Manhattan, Kansas, USA - Sample 500um MDAEnvironmentalOpen in IMG/M
3300004778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3FreshEnvironmentalOpen in IMG/M
3300005205Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005487Sediment microbial communities from Lake Washington, Seattle, Washington, USA - Methanol enrichmentEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300005943Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_4-Nov-14EnvironmentalOpen in IMG/M
3300005955Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T2_23-Sept-14EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007790Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projectsEnvironmentalOpen in IMG/M
3300007799Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-06EnvironmentalOpen in IMG/M
3300009083Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (megahit assembly)EnvironmentalOpen in IMG/M
3300009151Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaGEnvironmentalOpen in IMG/M
3300009430Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big SpringEnvironmentalOpen in IMG/M
3300009455Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal SpringEnvironmentalOpen in IMG/M
3300009695Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - frozenSSSS metaGEnvironmentalOpen in IMG/M
3300009710Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC113_MetaGEngineeredOpen in IMG/M
3300009716Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC111_MetaGEngineeredOpen in IMG/M
3300009768Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC115_MetaGEngineeredOpen in IMG/M
3300009787Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300009873Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plantEngineeredOpen in IMG/M
3300010348AD_HKYLcaEngineeredOpen in IMG/M
3300010351AD_USPNcaEngineeredOpen in IMG/M
3300011264Acid mine drainage microbial communities from Malanjkhand copper mine, India - M16 k-mer 63EnvironmentalOpen in IMG/M
3300012044Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ852 (21.06)EnvironmentalOpen in IMG/M
3300012045Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)EnvironmentalOpen in IMG/M
3300012046Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ833 (21.06)EnvironmentalOpen in IMG/M
3300012093Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)EnvironmentalOpen in IMG/M
3300012530Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)EnvironmentalOpen in IMG/M
3300012533Active sludge microbial communities from wastewater in Klosterneuburg, Austria - KNB2014incub_MGEngineeredOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300013097Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ859 (21.06)EnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300015194Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb1c, glacier snout)EnvironmentalOpen in IMG/M
3300015198Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G2A, Ice surface)EnvironmentalOpen in IMG/M
3300017787Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)EnvironmentalOpen in IMG/M
3300018059Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coexEnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018906Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 3 min after wetting v1EnvironmentalOpen in IMG/M
3300019487White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaGEnvironmentalOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300020027Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1EnvironmentalOpen in IMG/M
3300020034Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2EnvironmentalOpen in IMG/M
3300021090Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redoEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021976Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c1EnvironmentalOpen in IMG/M
3300022561Borup_combined assemblyEnvironmentalOpen in IMG/M
3300023171Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L169-409C-1EnvironmentalOpen in IMG/M
3300023194Activated sludge enriched bacterial communities from WWTP in Fort Collins, Colorado, USA ? MLEngineeredOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300024304Subsurface microbial communities from Mancos shale, Colorado, United States - Mancos A_10_July_PBEnvironmentalOpen in IMG/M
3300025106Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring (SPAdes)EnvironmentalOpen in IMG/M
3300025130Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal Spring (SPAdes)EnvironmentalOpen in IMG/M
3300025691Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC115_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025973Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026931Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T2_23-Sept-14 (SPAdes)EnvironmentalOpen in IMG/M
3300027393Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_4-Nov-14 (SPAdes)EnvironmentalOpen in IMG/M
3300027778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027802Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB14_precipitate (SPAdes)EngineeredOpen in IMG/M
3300027831Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027840Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027843Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028664Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_1EnvironmentalOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031344Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaGHost-AssociatedOpen in IMG/M
3300031507Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EMHost-AssociatedOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032420Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (spades assembly)EnvironmentalOpen in IMG/M
3300034013Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Jun2018-rr0034EnvironmentalOpen in IMG/M
3300034157Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_18EnvironmentalOpen in IMG/M
3300034170Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_16EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI24809J26612_100361143300002100SoilMNNNKKREDLSDKIKIALDKAIKDVIAETKSKNSYLVVADKKGNIKKIPAKDL*
Ga0062383_1027997413300004778Wetland SedimentMIKKVKREDLSGKIKIALDKAIKNVIAETKAKNSYMVIADKNGNIQKIPAKDL*
Ga0062383_1057381323300004778Wetland SedimentMNNRPKREDLSGKIKIALDKAISKVVAETKAKNSYLVIADKKGNIKKIPAKDL*
Ga0068999_1009461023300005205Natural And Restored WetlandsMSIIKKREDLSDKIKVALDKAIKKVIAETKEKNSYMVVADKNGKIRKIPAKDL*
Ga0070676_1059619623300005328Miscanthus RhizosphereVINKEKKRENLSPKIKIALDNAIKKVIAETKARNSYLVIADKKGNIKKIPARDL*
Ga0070670_10005054723300005331Switchgrass RhizosphereMSEGNKRENLTGKIKIALDNAIKKVIAETKAKNSYMVIADKKGNVKKIPASDL*
Ga0068869_10013812713300005334Miscanthus RhizosphereMSKLQKREDLSDKIKIALDKAIQKVIAETKATNTYMVYSDKKGNIIKVPAKDL*
Ga0068868_10026677213300005338Miscanthus RhizosphereLVINKEKKRENLSPKIKIALDNAIKKVIAETKARNSYLVIADKKGNIKKIPARDL*
Ga0070689_10015066133300005340Switchgrass RhizosphereMIDPKKVEDLSDKIQIALEKAIKVVIAEAKARNSYLVIADKKGNIKKIPASDL*
Ga0070673_10041145023300005364Switchgrass RhizosphereMSNRKKEKIAPKIKIALDNAIKKIIAETKAKNSYLVIADKKGNIKKIPARDL*
Ga0070667_10029641623300005367Switchgrass RhizosphereMSEPKKREDLSDKIQIALDKAIQKVIAETKATNTYMVYSDKKGNIIKVPAKDL*
Ga0070685_1148819823300005466Switchgrass RhizosphereMIDPKKVEDLSDKIQIALEKAIKVVIAEAKARNSYLVIADKKGNIKKIPASDL**
Ga0074211_12248513300005487SedimentMRNLRKREDSAMIKIALDKAIKNVIAETKAKNSYLVIADKKGNIKKVPAKDL*
Ga0070665_10056415333300005548Switchgrass RhizosphereMDNAKKREDLSDKIQIALDKAIQKVIAETKAKNSYLVYADKDGKIIKVPAKDL*
Ga0068861_10051709523300005719Switchgrass RhizosphereMSNGKKRENPAPKIKIALDNAIKKIIAETKAKNSYLVIADKKGNIKKIPARDL*
Ga0068862_10266695813300005844Switchgrass RhizosphereKKVEDLSDKIQIALEKAIKVVIAEAKARNSYLVIADKKGNIKKIPARDL*
Ga0073926_1001312413300005943SandEDLSDKIKVALDKAIKNVIAETKAKNSFLVVADKKGNIKKIPAKDL*
Ga0073922_100671533300005955SandMSIIKQREDLSDKIKVALDKAIKNVIAETKAKNSFLVVADKKGNIKKIPAKDL*
Ga0068871_10016343613300006358Miscanthus RhizosphereLVINKEKKRENLSPKIKIALDNAIKKVIAETKARNSYLVIADKKGNIKKIP
Ga0079216_1069994223300006918Agricultural SoilMSNLKKREDLSDKIKIALDKAIKNVIAETKTKNSFLVIADKKGNIKKIPAKDL*
Ga0079216_1199264423300006918Agricultural SoilMEKVSKKRDLSSKIKTALDKAVKKVIADQKAKDGYLITGDKAGNIKKIPAK
Ga0079218_1242026123300007004Agricultural SoilMNKKEREDLSSKIKIALDKAIQKVIAEEKARNGFLVISDRDGNIKKIPAKDF*
Ga0105679_1056862943300007790SoilMEKVSKKSDLSEKIKTALDKAVKKVITDQKAKNGYLITGDAQGNIKKIPAKDL*
Ga0105049_1048386323300007799FreshwaterMSIAKEKKDLSAQIKKALDKATKKVIAETKAKNSYMVIADKNGTIKKIPAKDL*
Ga0105047_1046041133300009083FreshwaterMSIAKEKQDLSAQIKKALDKATQKVIAETKAKNSYMVIAGKNGSIKKIPAKDL*
Ga0114962_1013929323300009151Freshwater LakeMIKQKKREDLSAKIQVALDKAIQQVKADTKAKNSFFVIADENGNIKKIPAKDL*
Ga0114938_1000035813300009430GroundwaterMKINKKPGDLRGKIKVALDKAIKKVIAEEKARNGYLVVADKEGKIKKIPAKDL*
Ga0114939_1001301853300009455GroundwaterMINVENKKDLSDKIQIALDKAKQNLIAETKAKNSYLVIADEKGNIKKIPAKDL*
Ga0123337_1018183233300009695Glacier ValleyMKPTNKRGDLSDKIQIALDKATQKIIAEAKANNSFIVVSDDKGGVKKIYAKDL*
Ga0116192_117747223300009710Anaerobic Digestor SludgeVNDLSSKIKIALDKAIEKVIAETKAKNSYMVVSDKKGNIKKIPASEL
Ga0116191_110018533300009716Anaerobic Digestor SludgeVNDLSSKIKIALDKAIEKVIAEIKAKNSYMVVSDKKGNIKKIPASEL*
Ga0116193_108740623300009768Anaerobic Digestor SludgeVNDLSSKIKIALDKAIEKVIAETKAKNSYMVVSDKKGNIKKIPASEL*
Ga0116226_1059577823300009787Host-AssociatedMINQKKREDLSAKIQVALDKAIEQVKAETKAKNSFFVYSDKKGNIIKIAGKDL*
Ga0131077_10002349333300009873WastewaterMNNLKKKESLVPKIQEALDKAIQKVIAETKAKNSYLVIADKDGKITKIPAKDL*
Ga0131077_1008774443300009873WastewaterMSNGNNRESRLGKIEIALAKAIQNVIAETKAKNSFLVIADKKGNIKKIPAKDL*
Ga0116255_1074124623300010348Anaerobic Digestor SludgeMKPHLKANDLSSKIKVALDKAIEKVIAETKAKNSYMVVSDKKGNIKKIPASEL*
Ga0116248_1022966423300010351Anaerobic Digestor SludgeMGPSDKREDLSVKIKIALDKATQKIIAEAKASGSYIVVSDKKGGVKKIYAKDL*
Ga0151623_101174813300011264SedimentMNNINKREDLSDKIKLALDKAIKKVIAETKAKNSYLVIADKDGKIKKIPAKDL*
Ga0136636_1034018823300012044Polar Desert SandMSIVKKREDLSGKIKVALDKAIQNLEVETKAKNSYLVIADKRGNIKKIPAKDL*
Ga0136623_1002340823300012045Polar Desert SandMNTPKKREDLSDKIKIALDKAIKNVIAETKSKNSYLVIADKDGNITRIPAKDL*
Ga0136634_1002266113300012046Polar Desert SandMSIAKETKDLSAQIKKALDKATQKVIAETRAKNSYMVIADKNGSIKKIPAKDL*
Ga0136632_1052716713300012093Polar Desert SandKKREDLSDKIKIALDKAIKNVIAETKSKNSFLVVADKDGNIIKIPAKDL*
Ga0136635_1002483133300012530Polar Desert SandMNTPKKREDLSDKIKVALDKAIKNVIAETKSKNSYLVIADKDGNITRIPAKDL*
Ga0138256_1004210343300012533Active SludgeMNNNKKREDLSEKIKVALDKAIINVIAETKAKNSYLVIADKQGNIKKIPAKDL*
Ga0164241_1126592723300012943SoilMNNTNKREDLSDKIKGALDKAIKKVIAETKAKNSYLVIADKDGKIKKIPARDL*
Ga0136639_1008181133300013097Polar Desert SandMSIAKETKDLSAQIKKALDKATQKVIAETKAKNSYMVIADKNGSIKKIPAKDL*
Ga0157374_1012398633300013296Miscanthus RhizosphereVINKEKKRENLSPKIKIALDNAIKKVIAETKARNSYLVIADKKGNSKKIPARDL*
Ga0157375_1343550313300013308Miscanthus RhizosphereDPKKVEDLSDKIQIALEKAIKVVIAEAKARNSYLVIADKKGNIKKIPASDL*
Ga0120158_1036242123300013772PermafrostMSTSKKREDLSPKITVALHKAIQRVIAEEKAHNGYLVISDHKGNIKKIPAKDFMNSNPFHLISM*
Ga0167666_103163533300015194Glacier Forefield SoilMSTVKKQEDLSGKIKIALDKAIKKVVEETKAKNSYFVFSDKNGVIKKIPAKDL*
Ga0167625_102968923300015198Glacier Forefield SoilMSTVKKQEDLSEKIKIALDKAIKKVVEETKAKNSYFVFSDKNGNIKKIPAKDL*
Ga0183260_1083391413300017787Polar Desert SandMVIDGSPKIKIALDKAIQKIIAEEKARNGYLVVSDSNGNIKRIPAKDL
Ga0184615_1002759423300018059Groundwater SedimentMADKKKNKSFSAKIKIALSKAIEKVIAEEKARNGYLVVSDKKGNIKKIPASEL
Ga0184629_1034477913300018084Groundwater SedimentMVNNKNSKDLSGKIKIALDKAIKKVIAEEKARDGYLVVSDKKGNIKKIPAREL
Ga0193609_104222613300018906SoilMSKLKKREDLSDKIKIALDKAITNVIAETKSKNTYLVIADDDGNIKKIPAKDL
Ga0187893_10002338273300019487Microbial Mat On RocksMKNNSKKVEDLSDKIKVALDKAIENVIAETKAKNSYLVIADKNGKIKKIPAKDL
Ga0193726_113660223300020021SoilMIKKKSEDLSDKIQIALDKAIQKVIAETKAKNSYLVIADKKGNIKKIPAKDL
Ga0193752_113882223300020027SoilMSSKKKREDLSAKIKIALDKAIQGVIAETKAKNSYLVIADKKGSIIKIPAKDL
Ga0193753_1000256293300020034SoilMNTGKKIEDLSDKIKIALDKAIQGVIAETKAKNSYLVIADKKGNIIKIPAKDL
Ga0193753_1001317023300020034SoilMSSKKKREDLSAKIKIALDKAIQGVIAETKAKNSYLVVSDKKGSIIKIPAKDL
Ga0210377_1005321823300021090Groundwater SedimentMADKKKNKDLSAKIKIALSKAIEKVIAEEKARNGYLVVSDKKGNIKKIPASEL
Ga0210406_100000182123300021168SoilMNSDNKGKDLSGKIKIALDKAIQNVIAETKAKNSYMVISDKNGGIKKIPARDL
Ga0193699_1024922823300021363SoilMNNGKKREDLSDKIKIALDEAIKDVIAETKAKNSYMVIADKKGNIKKIPAKDL
Ga0210390_1039251523300021474SoilMNSDNKSKDLSGKIKIALDKAIQGVIAETKAKNSYMVISDKNGGVKKIPAKDL
Ga0193742_109319223300021976SoilMSSKKKREDLSAKIKIALDKAIQGVIAETKAKNSYMVIADKKGNIKKIPARDL
Ga0212090_1014574833300022561Glacier ValleyMKPTNKRGDLSDKIQIALDKATQKIIAEAKANNSFIVVSDDKGGVKKIYAKDL
Ga0247813_1011176723300023171Plant LitterMIIKKKREDLSGKIKTALDKGIQKLIAETKATNSYIVVSDKNGKVKKIPAKDL
Ga0256612_128187923300023194Activated SludgeMDSSKKAEDLSAKIQVALDKAIQGVIAETKAKNSYMVIADKKGHIKKIPAKDL
Ga0179589_1046408023300024288Vadose Zone SoilKSLILSYTKKSLAMPNKQKREDLSEKIKIALDKGIQKLIAETKAKNSYLVIADKNGKIKKIYAKDL
Ga0233391_100944613300024304Deep Subsurface SedimentMSNIKKREDLSGKIKIALDKAIVKVVAETKAKNSYLVVADKKGNIKKIPAKDL
Ga0209398_1000002813300025106GroundwaterMYIQDLQGMKINKKPGDLRGKIKVALDKAIKKVIAEEKARNGYLVVADKEGKIKKIPAKD
Ga0209594_102629343300025130GroundwaterMVNGKKQEDLSGKIKIALDKAIKKVIAEEKARNGYLVVTDKEGKIKKIPAKDL
Ga0209594_105104523300025130GroundwaterMINVENKKDLSDKIQIALDKAKQNLIAETKAKNSYLVIADEKGNIKKIPAKDL
Ga0208826_106322023300025691Anaerobic Digestor SludgeMKPHTKVNDLSSKIKIALDKAIEKVIAETKAKNSYMVVSDKKGNIKKIPASEL
Ga0207710_1000430353300025900Switchgrass RhizosphereMIDPKKVEDLSDKIQIALEKAIKVVIAEAKARNSYLVIADKKGNIKKIPASDL
Ga0207680_10000048503300025903Switchgrass RhizosphereVINKEKKRENLSPKIKIALDNAIKKVIAETKARNSYLVIADKKGNIKKIPARDL
Ga0207647_1013617723300025904Corn RhizosphereMIDPKKVEDLSDKIQIALEKAIKVVIAEAKARNSYLVIADKKGNIKKIPARDL
Ga0207650_1136439913300025925Switchgrass RhizosphereMSEGNKRENLTGKIKIALDNAIKKVIAETKAKNSYMVIADKKGNVKKIPASDL
Ga0207689_1029480623300025942Miscanthus RhizosphereMVIKEKREDLSGKIKIALDKGIKKLIAETKATNSYLVVSDKNGKIKKISAKDL
Ga0207651_1026325713300025960Switchgrass RhizosphereKGKKRENPAPKIKIALDNAIKKIIAETKAKNSYLVIADKKGNIKKIPARDL
Ga0207712_1006109623300025961Switchgrass RhizosphereMSEPKKREDLSDKIQIALDKAIQKVIAETKATNTYMVYSDKKGNIIKVPAKDL
Ga0210145_103449223300025973Natural And Restored WetlandsMSIIKKREDLSDKIKVALDKAIKKVIAETKEKNSYMVVADKNGKIRKIPAKDL
Ga0207703_1191046213300026035Switchgrass RhizosphereVINKEKKRENLSPKIKIALDNAIKKVIAETKARNSYLVIADKKGNIKKIPA
Ga0207639_1183183023300026041Corn RhizosphereVINKEKKRENLSPKIKIALDNAIKKVIAETKAKNSYLVIADKKGNIKKIPARDL
Ga0207641_1013395423300026088Switchgrass RhizosphereMANKKQREDLSAKIKIALDKGIQKLIAETKAKNSYLVIADKNGNIKEIPAKDL
Ga0207675_100012993103300026118Switchgrass RhizosphereMSKLQKREDLSDKIKIALDKAIQKVIAETKATNTYMVYSDKKGNIIKVPAKDL
Ga0209850_100648523300026931SandMSIIKQREDLSDKIKVALDKAIKNVIAETKAKNSFLVVADKKGNIKKIPAKDL
Ga0209867_102248123300027393SandEDLSDKIKVALDKAIKNVIAETKAKNSFLVVADKKGNIKKIPAKDL
Ga0209464_1027148813300027778Wetland SedimentMNNRPKREDLSGKIKIALDKAISKVVAETKAKNSYLVIADKKGNIKKIPAKDL
Ga0209476_1021559613300027802Activated SludgeMNNNKKREDLSEKIKVALDKAIINVIAETKAKNSYLVIADKQGNIKKIPAKDL
Ga0209797_1021882013300027831Wetland SedimentMSNSSKREDLSGKIQIALDKAIKNVIAETKAKNSYMVVADKKGNIKKIPAKDL
Ga0209683_1021987023300027840Wetland SedimentMKNSSKREDLSSKIKIALDKAIKNVIAETKAKNSYMVVADKKGNIKKIPAKDL
Ga0209798_1022584313300027843Wetland SedimentMIKKVKREDLSGKIKIALDKAIKNVIAETKAKNSYMVIADKNGNIQKIPAKDL
Ga0268266_1034804933300028379Switchgrass RhizosphereMDNAKKREDLSDKIQIALDKAIQKVIAETKAKNSYLVYADKDGKIIKVPAKDL
Ga0302164_1018230923300028664FenMVIKQKREDLSGKIKTALDKGIQKLIAETKATNSYIVVSDKSGKVKKIPAKDL
Ga0265338_1006462123300028800RhizosphereMITQKNTEDLSTKIKIALDKAVEKVIAETKTKNCYLVFADDKGNIKKVFAKDL
(restricted) Ga0255311_107701423300031150Sandy SoilMNTAKKTEDLSDKIKVALDKAIKNVIAETKAKNSYMDIADKNGKIKKIPAKDL
(restricted) Ga0255310_1001891223300031197Sandy SoilMNTAKKTEDLSDKIKVALDKAIKNVIAETKAKNSYMVIADKNGKIKKIPAKDL
Ga0265316_1006668913300031344RhizosphereDLSTKIKIALDKAVEKVIAETKTKNCYLVFADDKGNIKKVFAKDL
Ga0307509_1016031033300031507EctomycorrhizaMSSKKKVEDLSDKIKIALDEAIKEVIAETKAKNSYLVVADKKGNIKKIPAKDL
Ga0315290_1160629823300031834SedimentMSTSKKREDLSGKIQIALDKAIKNVIAETKAKNSYLVIADKDGKVKKIPAKDL
Ga0308174_1091307323300031939SoilMEKVKNKKDLSSKMKTALDKAVKKIIAEEKSRNGHLVVGDENGNIKKIPAKDLK
Ga0307414_1036544133300032004RhizosphereMNNNKKREDLSDKIKTALDKAIKNVIAETKAKNSYLVIADKKGNIKKIPAKDL
Ga0335397_1034896323300032420FreshwaterMSIAKEKQDLSAQIKKALDKATQKVIAETKAKNSYMVIAGKNGSIKKIPAKDL
Ga0334991_0004883_2808_29693300034013FreshwaterMNAVKTREDLSPKITAALKKAIEKVIAETKEKNSYMVISDKNGKIKKIPAKDL
Ga0370506_005871_2167_23283300034157Untreated Peat SoilMENKDKPGDLRDKIKIALDKAIQKVIAEEKASNGYLVVADKDGNIKKIPASEL
Ga0370487_0007774_470_6313300034170Untreated Peat SoilMVIKQKREDLSGKIKTALDKGIQKLIAETKATNSYIVVSDKNGKVKKIPAKDL

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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