Metagenome Family F092063

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092063
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	56 residues
Representative Sequence	MSKMAELDLTIRDMLEEGYNPVSISVRLGIPLHFVYDILEYDQDMEELSPFNTVNS
Number of Associated Samples	62
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	88.79 %
% of genes near scaffold ends (potentially truncated)	11.21 %
% of genes from short scaffolds (< 2000 bps)	64.49 %
Associated GOLD sequencing projects	45
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (46.729 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (55.140 % of family members)
Environment Ontology (ENVO)	Unclassified (81.308 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (87.850 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62. 1JGI12421J11937_100039427 2JGI24219J26650_10175231 3Ga0065167_10829311 4Ga0007804_10005627 5Ga0007791_101684882 6Ga0007794_100043323 7Ga0007794_100094637 8Ga0007794_100098137 9Ga0007794_100400072 10Ga0007794_101160333 11Ga0007792_100073993 12Ga0007792_100357373 13Ga0007792_100947242 14Ga0070744_100028193 15Ga0075464_102428292 16Ga0102817_11231531 17Ga0102828_10043325 18Ga0102816_10958751 19Ga0102829_11644382 20Ga0114973_101385193 21Ga0114962_100286354 22Ga0114962_101030736 23Ga0114962_101500093 24Ga0114962_101743885 25Ga0114962_102270683 26Ga0114962_103407861 27Ga0114980_100606072 28Ga0114963_101713794 29Ga0114968_106270721 30Ga0114977_101306801 31Ga0114977_103105773 32Ga0114977_104801691 33Ga0114978_106370803 34Ga0114966_1000908413 35Ga0114966_1005100710 36Ga0114966_106072261 37Ga0114966_106304311 38Ga0114970_102510063 39Ga0114975_100345011 40Ga0114975_101494633 41Ga0114975_107207782 42Ga0114979_104577563 43Ga0114969_103483421 44Ga0114959_104494392 45Ga0114974_1004084410 46Ga0114974_102113063 47Ga0114964_100344017 48Ga0114964_102747751 49Ga0114964_103661853 50Ga0114960_102515412 51Ga0114967_101551485 52Ga0136644_107387091 53Ga0133913_111477233 54Ga0133913_113840874 55Ga0133913_118105181 56Ga0119955_10230525 57Ga0177922_111498801 58Ga0194047_102446983 59Ga0213920_10103153 60Ga0214921_100697944 61Ga0214919_10000213146 62Ga0214919_100381382 63Ga0214919_100530256 64Ga0214919_101105413 65Ga0214919_102355883 66Ga0214919_103341863 67Ga0244775_1000381215 68Ga0244775_100063308 69Ga0208103_10049984 70Ga0208497_10078945 71Ga0208248_10013497 72Ga0208248_10040219 73Ga0208248_10052768 74Ga0208248_10083786 75Ga0208248_10797932 76Ga0208613_10489003 77Ga0208613_10640511 78Ga0208916_101574944 79Ga0208916_104898392 80Ga0209499_10035911 81Ga0209297_11912252 82Ga0209087_12699242 83Ga0209190_1000043106 84Ga0209190_100958112 85Ga0209085_10558216 86Ga0209085_12847512 87Ga0209597_11897643 88Ga0209084_10632963 89Ga0209084_11302333 90Ga0209084_12206973 91Ga0209084_13315452 92Ga0209084_13623432 93Ga0209296_10357906 94Ga0209296_11373392 95Ga0209086_103775431 96Ga0209500_1000969911 97Ga0209107_100212547 98Ga0209107_101609041 99Ga0209668_100501346 100Ga0209191_10025383 101Ga0209191_11715532 102Ga0209191_13099792 103Ga0209299_10902271 104Ga0304728_11316592 105Ga0304730_11495513 106Ga0334992_0160866_807_977 107Ga0335003_0094031_1336_1506
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62. 1JGI12421J11937_100039427 2Ga0007804_10005627 3Ga0007791_101684882 4Ga0114977_101306801 5Ga0114978_106370803 6Ga0114964_103661853
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56 1Ga0209107_101609041 2JGI24219J26650_10175231 3Ga0007794_100098137 4Ga0007794_101160333 5Ga0007792_100357373 6Ga0114962_101743885 7Ga0114977_103105773 8Ga0114977_104801691 9Ga0114966_106072261 10Ga0114970_102510063 11Ga0114969_103483421 12Ga0133913_111477233 13Ga0177922_111498801 14Ga0194047_102446983 15Ga0214921_100697944 16Ga0208497_10078945 17Ga0209190_1000043106 18Ga0209668_100501346 19Ga0335003_0094031_1336_1506
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.24% β-sheet: 14.29% Coil/Unstructured: 65.48%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF10902	WYL_2	9.35
PF00534	Glycos_transf_1	3.74
PF03851	UvdE	2.80
PF01844	HNH	1.87
PF13692	Glyco_trans_1_4	0.93
PF00004	AAA	0.93
PF00270	DEAD	0.93
PF05050	Methyltransf_21	0.93
PF00149	Metallophos	0.93
PF13392	HNH_3	0.93

Showing 1 to 10 of 14 entries

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COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG4294	UV DNA damage repair endonuclease	Replication, recombination and repair [L]	2.80
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.27 %
Unclassified	root	N/A	46.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	4.67 %
Unclassified	root	N/A	46.73 %
Viruses	superkingdom	All Organisms → Viruses	48.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.67 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	16.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
Unclassified	root	N/A	46.73 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	16.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.74 %
Unclassified	root	N/A	46.73 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
Unclassified	root	N/A	46.73 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	16.82 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	16.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
Unclassified	root	N/A	46.73 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	2.80 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	14.02 %
gamma proteobacterium NOR5-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	2.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
Unclassified	root	N/A	46.73 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.93 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.93 %
gamma proteobacterium NOR5-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	2.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
Unclassified	root	N/A	46.73 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14.02 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10003942	Not Available	5932	Open in IMG/M
3300002098\|JGI24219J26650_1017523	Not Available	1015	Open in IMG/M
3300004693\|Ga0065167_1082931	Not Available	553	Open in IMG/M
3300004770\|Ga0007804_1000562	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	13417	Open in IMG/M
3300004772\|Ga0007791_10168488	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	634	Open in IMG/M
3300004774\|Ga0007794_10004332	Not Available	4331	Open in IMG/M
3300004774\|Ga0007794_10009463	All Organisms → cellular organisms → Bacteria → Proteobacteria	2920	Open in IMG/M
3300004774\|Ga0007794_10009813	Not Available	2862	Open in IMG/M
3300004774\|Ga0007794_10040007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	1400	Open in IMG/M
3300004774\|Ga0007794_10116033	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	799	Open in IMG/M

Showing 1 to 10 of 107 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	90.65%
Marine	Environmental → Aquatic → Marine	9.35%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	2.80%
Creek	Environmental → Aquatic → Freshwater → Creek	0.93%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.74%
Lake	Environmental → Aquatic → Freshwater → Lake	66.36%
Lentic	Environmental → Aquatic → Freshwater → Lentic	23.36%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.80%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.74%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	2.80%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	66.36%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	19.63%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.93%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.80%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	3.74%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.80%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	18.69%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.41%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.87%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.93%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	2.80%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	55.14%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.93%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	0.93%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002098	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B7 metagenome	Environmental	Open in IMG/M
3300004693	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA7.5M (version 2)	Environmental	Open in IMG/M
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental	Open in IMG/M
3300004772	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0.5M	Environmental	Open in IMG/M
3300004774	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M	Environmental	Open in IMG/M
3300004805	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6M	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300007555	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555	Environmental	Open in IMG/M

Showing 1 to 10 of 62 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_100039427	3300000756	Freshwater And Sediment	MSKMAELDLSIRDMLEEGYNPVSISVRLGIPLHFIYDVLEYEQDMEELSPFNTVNS*
JGI24219J26650_10175231	3300002098	Lentic	MSKMADLDLTIRDMLEEGYNPVSISVRLGIPVHFVYDILEYEQESEDLSPFNTVNS*
Ga0065167_10829311	3300004693	Freshwater	MSKMAELDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEDDQYGEELSPYNTVNS*
Ga0007804_10005627	3300004770	Freshwater	MSKMAEIDSGIRDMLDEGYGPVAISVRLGIPVYFVYDILESDQEFEELNPFNTINS*
Ga0007791_101684882	3300004772	Freshwater	MSKMAELDMEIRDMLDEGFSPVSVSVRLNIPLTFVYDVLDSVQEDEDLSPFNTVNS*
Ga0007794_100043323	3300004774	Freshwater	MSKMADLDLSIRDMLEEGYNPVTVSVRLGIPLHFVYDILEYEQDMEELSPFNTVNS*
Ga0007794_100094637	3300004774	Freshwater	MSKMSELDLSIRDMIEEGYNPVTISVRLGIPVHFVYDILEDDQYGEDLSPYNTVNS*
Ga0007794_100098137	3300004774	Freshwater	MSKMADLDLSIRDMLDEGYNPVSISVRLGIPLHFVYDILEYEQDIEELSPFNTMNS*
Ga0007794_100400072	3300004774	Freshwater	MSKMAELDLTIRDMLDEGYNPVSISVRLGIPLHFVYDILEYEQGPEELSPYNTVNS*
Ga0007794_101160333	3300004774	Freshwater	MSKMADLDLSIRDMLEEGYNPVSISVRLGIPLYFVYDVLEYEKDMEELRPFNTVNS*
Ga0007792_100073993	3300004805	Freshwater	MAELDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEDDQYGEELSPYNTVNS*
Ga0007792_100357373	3300004805	Freshwater	MSKMADLDLSIRDMLDEGYNPVSISVRLGIPVHFLYDILEYEQGPEELSTYNTVNS*
Ga0007792_100947242	3300004805	Freshwater	MSKMSELDLSIRDMLEEGYNPVSISVRLGIPLHFVYDILEYEQESEDLSPYNTVNS*
Ga0070744_100028193	3300006484	Estuarine	MSKMAELDLTIRDMLEEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPYNTVNS*
Ga0075464_102428292	3300006805	Aqueous	MSKMADLDLSIRDMLEEGYNPVSISVRLGIPLHFVYDVLEYDQESEDLSPFNTVNS*
Ga0102817_11231531	3300007555	Estuarine	IKMSKMAELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPFNTIEFSNS*
Ga0102828_10043325	3300007559	Estuarine	MSKMAELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDILEYEQDIEELNPFNTIEFGNS*
Ga0102816_10958751	3300008999	Estuarine	MSKMAELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPFNTIEFSNS*
Ga0102829_11644382	3300009026	Estuarine	MSKMADLDLSIRDMLDEGYNPVSISVRLGIPLHFIYDVLEYEQDIEELSPYNTVNS*
Ga0114973_101385193	3300009068	Freshwater Lake	MSKISELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPYNTVNS*
Ga0114962_100286354	3300009151	Freshwater Lake	MSKMADLDLTIRDMLDEGYNPVSISVRLGIPVHFLYDILEYEQGPEELSPYNTVNS*
Ga0114962_101030736	3300009151	Freshwater Lake	MSKISELDLTIRDMLEEGYGPVSISVRLGIPVYFVYDILSYDEDNEELSPFNTVNF*
Ga0114962_101500093	3300009151	Freshwater Lake	MSKMADLDLSIRDMLEEGYNPVSISVRLGIPLHFIYAVLEYEQDMEELSPFNTVNS*
Ga0114962_101743885	3300009151	Freshwater Lake	MSKMADLDLSIRDMLHEGYNPVSISVRLGIPLSFVYGVLEYEEDLEELNPFNTINS*
Ga0114962_102270683	3300009151	Freshwater Lake	MSKMSELDLSIRDMLEEGYNPVTISVRLGIPVHFVYGILEDDQYGEELSPFNTVNS*
Ga0114962_103407861	3300009151	Freshwater Lake	MSKMSELDLCIRDMLEEGYNPVSISVRLGIPVHFVYDVLEDDQYGEDLSPYNTVNS*
Ga0114980_100606072	3300009152	Freshwater Lake	MSKMAELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPFNTIEFGNS*
Ga0114963_101713794	3300009154	Freshwater Lake	MSKMADLDLSIRDMLHEGYNPVSISVRLGIPLSFVYDVLEYEEDLEELNPFNTINS*
Ga0114968_106270721	3300009155	Freshwater Lake	KMSKISELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPYNTVNS*
Ga0114977_101306801	3300009158	Freshwater Lake	ISELDLTIRDMLEEGYSPVSISVRLGIPVYFVYDILSYDEDNEELSPFNTVNS*
Ga0114977_103105773	3300009158	Freshwater Lake	MSKMADLDLSIRDMLDEGYNPVSISVRLGIPVHFVYDVLEYDQEYEDFSPFNTVNS*
Ga0114977_104801691	3300009158	Freshwater Lake	MSKMADLDLSIRDMLEEGYSPVTVSVRLGIPLHFVYDILEYEQDMEELSPFNTVNS*
Ga0114978_106370803	3300009159	Freshwater Lake	IRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPYNTVNS*
Ga0114966_1000908413	3300009161	Freshwater Lake	MSKMADLDLSIRDMLEEGYSPVTVSVRLGIPLHFVYDILEDDQYGEDLSPYSTVNS*
Ga0114966_1005100710	3300009161	Freshwater Lake	MSKMADLDLSIRDMLEEGYNPVSISVRLGIPLYFVYDVLEYEKDMEELSPFNTVNS*
Ga0114966_106072261	3300009161	Freshwater Lake	MSKMAELDLSIRDMLEEGYNPITISVRLGIPVHFVYDILEDDQYGEELSPFNTVNS*
Ga0114966_106304311	3300009161	Freshwater Lake	MSKMAELDLTIRDMLEEGYNPVSISVRLGIPVHFVYDVLEYDQEYEDFSPFNTVNS*
Ga0114970_102510063	3300009163	Freshwater Lake	MSKMADLDLSIRDMLEEGYNPVSISVRLGIPLHFVYDILENDQYGEELSPFNTLNS*
Ga0114975_100345011	3300009164	Freshwater Lake	MSKMSELDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEDDQYGEELSPFNTVNS*
Ga0114975_101494633	3300009164	Freshwater Lake	MSKMAELDLCIRDMLEEGYNPVSISVQLGIPVHFVYDILEDDQYGEELSPFNTVNS*
Ga0114975_107207782	3300009164	Freshwater Lake	MSKMSELDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEYDQYGEDLSPYNTVNS*
Ga0114979_104577563	3300009180	Freshwater Lake	MSKMADLDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPFNTIEFGNS*
Ga0114969_103483421	3300009181	Freshwater Lake	MSKMADLDLTIRDMLDEGYGPVSISVRLGIPVYFVYDILEYEQDIEELNPFNTIEFGNS*
Ga0114959_104494392	3300009182	Freshwater Lake	MSELDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEDDQYGEDLSPYNTVNS*
Ga0114974_1004084410	3300009183	Freshwater Lake	MSKMSELDLSIRDMLEEGYNPVSISVRLGIPLHFVYDILEYEQDMEELSPFNTVNS*
Ga0114974_102113063	3300009183	Freshwater Lake	MSKMADLDLSIRDMLEEGYSPVSISVRLGIPLHFVYDILEYEQDMEELSPFNTVNS*
Ga0114964_100344017	3300010157	Freshwater Lake	MSKISELDLTIRDMLEEGYGPVSISVRLGIPVYFVYDILSYDEDNEELSPFNTVNS*
Ga0114964_102747751	3300010157	Freshwater Lake	MSKMAELDLSIRDMLDEGYNPVSISVRLGIPLHFVYDILEYEQGPEEL
Ga0114964_103661853	3300010157	Freshwater Lake	MSKMSELDLCIRDMLEEGYNPVSISVRLGIPVHFVYDILEYDQYGE
Ga0114960_102515412	3300010158	Freshwater Lake	MSKMAELDLSIRDMLEEGYNPVSISVRLGIPLHFVYDILEYEQDMEELSPYNTVNS*
Ga0114967_101551485	3300010160	Freshwater Lake	ELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPYNTVNS*
Ga0136644_107387091	3300010334	Freshwater Lake	MSELDLSIRDMIEEGYNPVTISVRLGIPVHFVYDILEDDQYGEDLSPYNTVNS*
Ga0133913_111477233	3300010885	Freshwater Lake	MSKMAELDLGIRDMLDEGYNPVSISVRLGIPLHFVYDVLEQDQYPEEYSPFDTINS*
Ga0133913_113840874	3300010885	Freshwater Lake	MSKMAELDLCIRDMLEEGYNPVSISVRLGIPVHFVYDILEDDQYGEELSPFNTVNS*
Ga0133913_118105181	3300010885	Freshwater Lake	LSIRDMLEEGYSPVTVSVRLGIPLHFVYDILEYEQDMEELSPFNTVNS*
Ga0119955_10230525	3300012006	Freshwater	MSKMAELDLGIRDMLDEGYSPVSISVRLGIPLHFVYDVLEQDQYPEEYSPFDTINS*
Ga0177922_111498801	3300013372	Freshwater	MSKMAELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELSPFNTVNS*
Ga0194047_102446983	3300021354	Anoxic Zone Freshwater	MSKMSELDLCIRDMLEEGYNPVSISVRLGIPVHFVYDILEDDQYGEDLSPYNTVNS
Ga0213920_10103153	3300021438	Freshwater	MSKMSELDLSIRDMIEEGYNPVTISVRLGIPVHFVYDILEDDQYGEDLSPYNTVNS
Ga0214921_100697944	3300023174	Freshwater	MSKMAELDMEIRDMLDEGFSPVSVSVRLNIPLTFVYDVLDSIQEDEDLSPFNTVNS
Ga0214919_10000213146	3300023184	Freshwater	MSKMAELDLCIRDMLEEGYNPVSISVRLGVPVHFVYDILEYDQYGEDLSPYNTVNS
Ga0214919_100381382	3300023184	Freshwater	MSKMAELDLGIRDMLDEGYSPVSISVRLGIPLHFVYDVLEQDQYPEEYSPFDTINS
Ga0214919_100530256	3300023184	Freshwater	MSKMAELDLGIRDMLDEGYNPVSISVRLGIPLYFVYDVLEYEKDMEELSPFNTVNS
Ga0214919_101105413	3300023184	Freshwater	MSKISELDLTIRDMLEEGYGPVSISVRLGIPVYFVYDILSYDEDNEELSPFNTVNS
Ga0214919_102355883	3300023184	Freshwater	MSKMAELDLSIRDMLEEGYNPVSISVRLGIPLHFIYDILEYDQYGEDLSPYNTVNS
Ga0214919_103341863	3300023184	Freshwater	MSKMADLDLSIRDMLEEGYNPVTISVRLGIPLHFVYDILEYEQDMEELSPYNTVNS
Ga0244775_1000381215	3300024346	Estuarine	MSKMAELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPFNTIEFSNS
Ga0244775_100063308	3300024346	Estuarine	MSKMAELDLTIRDMLEEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPYNTVNS
Ga0208103_10049984	3300025436	Freshwater	MSKMADLDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEDDQYGEELSPYNTVNS
Ga0208497_10078945	3300025466	Freshwater	MSKMAEIDSGIRDMLDEGYGPVAISVRLGIPVYFVYDILESDQEFEELNPFNTINS
Ga0208248_10013497	3300025595	Freshwater	MSKMADLDLSIRDMLEEGYNPVTVSVRLGIPLHFVYDILEYEQDMEELSPFNTVNS
Ga0208248_10040219	3300025595	Freshwater	MSKMADLDLSIRDMLDEGYNPVSISVRLGIPLHFVYDILEYEQDIEELSPFNTMNS
Ga0208248_10052768	3300025595	Freshwater	MSKMADLDLSIRDMLEEGYNPVSISVRLGIPVHFVYDVLEYDQESEDLSPFNTVNS
Ga0208248_10083786	3300025595	Freshwater	MAELDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEDDQYGEELSPYNTVNS
Ga0208248_10797932	3300025595	Freshwater	MSKMAELDLTIRDMLDEGYNPVSISVRLGIPLHFVYDILEYEQGPEELSPYNTVNS
Ga0208613_10489003	3300025616	Freshwater	MSKMSELDLSIRDMLEEGYNPVSISVRLGIPLHFVYDILEYEQESEDLSPYNTVNS
Ga0208613_10640511	3300025616	Freshwater	MSKMAELDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEDDQYGEELSPYNTVNS
Ga0208916_101574944	3300025896	Aqueous	MSKMADLDLSIRDMLEEGYNPVSISVRLGIPLHFVYDVLEYDQESEDLSPFNTVNS
Ga0208916_104898392	3300025896	Aqueous	MSKMAELDLTIRDMLEEGYNPVSISVRLGIPLHFIYDILEYEQDMEELSPYNTVNS
Ga0209499_10035911	3300027712	Freshwater Lake	MSKMADLDLSIRDMLEEGYNPVSISVRLGIPLHFIYAVLEYEQDMEELSPFNTVNS
Ga0209297_11912252	3300027733	Freshwater Lake	MSKMADLDLSIRDMLDEGYNPVSISVRLGIPVHFVYDVLEYDQEYEDFSPFNTVNS
Ga0209087_12699242	3300027734	Freshwater Lake	EYIKMSKISELDLTIRDMLEEGYSPVSISVRLGIPVYFVYDILSYDEDNEELSPFNTVNS
Ga0209190_1000043106	3300027736	Freshwater Lake	MSKMADLDLSIRDMLEEGYSPVTVSVRLGIPLHFVYDILEDDQYGEDLSPYSTVNS
Ga0209190_100958112	3300027736	Freshwater Lake	MSKISELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPYNTVNS
Ga0209085_10558216	3300027741	Freshwater Lake	MSKMADLDLSIRDMLHEGYNPVSISVRLGIPLSFVYDVLEYEEDLEELNPFNTINS
Ga0209085_12847512	3300027741	Freshwater Lake	MSKMADLDLTIRDMLDEGYNPVSISVRLGIPVHFLYDILEYEQGPEELSPYNTVNS
Ga0209597_11897643	3300027746	Freshwater Lake	MSKMAELDMEIRDMLDEGFSPVSVSVRLNIPLTFVYDVLDSVQEDEDLSPFNTVNS
Ga0209084_10632963	3300027749	Freshwater Lake	MSKISELDLTIRDMLEEGYGPVSISVRLGIPVYFVYDILSYDEDNEELSPFNTVNF
Ga0209084_11302333	3300027749	Freshwater Lake	MSKMADLDLSIRDMLHEGYNPVSISVRLGIPLSFVYGVLEYEEDLEELNPFNTINS
Ga0209084_12206973	3300027749	Freshwater Lake	MSKMSELDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEDDQYGEELSPFNTVNS
Ga0209084_13315452	3300027749	Freshwater Lake	MSKMAELDLGIRDMLDEGYNPVSISVRLGIPLHFVYDVLEQDQYPEEYSPFDTINS
Ga0209084_13623432	3300027749	Freshwater Lake	MSKMADLDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEYDQESEDLSPFNTVNS
Ga0209296_10357906	3300027759	Freshwater Lake	MSKMADLDLSIRDMLEEGYSPVSISVRLGIPLHFVYDILEYEQDMEELSPFNTVNS
Ga0209296_11373392	3300027759	Freshwater Lake	MSKMSELDLSIRDMLEEGYNPVSISVRLGIPLHFVYDILEYEQDMEELSPFNTVNS
Ga0209086_103775431	3300027770	Freshwater Lake	MSKMAELDLSIRDMLEEGYNPITISVRLGIPVHFVYDILEDDQYGEELSPFNT
Ga0209500_1000969911	3300027782	Freshwater Lake	MSKMAELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPFNTIEFGNS
Ga0209107_100212547	3300027797	Freshwater And Sediment	MSKMAELDLSIRDMLEEGYNPVSISVRLGIPLHFIYDVLEYEQDMEELSPFNTVNS
Ga0209107_101609041	3300027797	Freshwater And Sediment	MSKMAELDLTIRDMLEEGYNPVSISVRLGIPLHFVYDILEYDQDMEELSPFNTVNS
Ga0209668_100501346	3300027899	Freshwater Lake Sediment	MSKMAELDLTIRDMLDEGYNPVSISVRLGIPVHFVYDVLEYDSDVEELNPFNTVNS
Ga0209191_10025383	3300027969	Freshwater Lake	MSKMAELDLCIRDMLEEGYNPVSISVQLGIPVHFVYDILEDDQYGEELSPFNTVNS
Ga0209191_11715532	3300027969	Freshwater Lake	MSKMAELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPFNTVNS
Ga0209191_13099792	3300027969	Freshwater Lake	MSKMSELDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEYDQYGEDLSPYNTVNS
Ga0209299_10902271	3300027974	Freshwater Lake	DLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPFNTVNS
Ga0304728_11316592	3300028393	Freshwater Lake	MSKMSELDLSIRDMLEEGYNPVTISVRLGIPVHFVYGILEDDQYGEELSPFNTVNS
Ga0304730_11495513	3300028394	Freshwater Lake	MSKMADLDLTIRDMLDEGYGPVSISVRLGIPVYFVYDILEYEQDIEELNPFNTIEFGNS
Ga0334992_0160866_807_977	3300033992	Freshwater	MSKISELDLTIRDMLEEGYGPVTISVRLGIPVYFVYDILSYDEDNQELSPFNTVNS
Ga0335003_0094031_1336_1506	3300033995	Freshwater	MSKISELDLTIRDMLEEGYGPVSISVRLGIPVYFVYDILSYDEDNQELSPFNTVNS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters