NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F091915

Metagenome Family F091915

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F091915
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 58 residues
Representative Sequence MNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKDAAKTMGISSERYRCVGAK
Number of Associated Samples 74
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 92.52 %
% of genes near scaffold ends (potentially truncated) 14.95 %
% of genes from short scaffolds (< 2000 bps) 66.36 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction Yes
3D model pTM-score0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (49.533 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake
(31.776 % of family members)
Environment Ontology (ENVO) Unclassified
(75.701 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(74.766 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 11.63%    β-sheet: 34.88%    Coil/Unstructured: 53.49%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.61
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF137592OG-FeII_Oxy_5 3.74
PF10902WYL_2 1.87
PF00106adh_short 0.93
PF00535Glycos_transf_2 0.93
PF00487FA_desaturase 0.93
PF04851ResIII 0.93
PF00383dCMP_cyt_deam_1 0.93
PF12705PDDEXK_1 0.93
PF13580SIS_2 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG1398Fatty-acid desaturaseLipid transport and metabolism [I] 0.93
COG3239Fatty acid desaturaseLipid transport and metabolism [I] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms50.47 %
UnclassifiedrootN/A49.53 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002092|JGI24218J26658_1000680Not Available14441Open in IMG/M
3300002835|B570J40625_100824540Not Available812Open in IMG/M
3300004112|Ga0065166_10237549All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage729Open in IMG/M
3300004461|Ga0066223_1043660All Organisms → Viruses → Predicted Viral2702Open in IMG/M
3300004481|Ga0069718_13714206Not Available519Open in IMG/M
3300004772|Ga0007791_10179216Not Available610Open in IMG/M
3300005581|Ga0049081_10065720Not Available1365Open in IMG/M
3300005581|Ga0049081_10087313All Organisms → Viruses → Predicted Viral1168Open in IMG/M
3300005582|Ga0049080_10006537All Organisms → Viruses → Predicted Viral4043Open in IMG/M
3300005582|Ga0049080_10078132Not Available1133Open in IMG/M
3300006641|Ga0075471_10140200All Organisms → Viruses → Predicted Viral1283Open in IMG/M
3300006802|Ga0070749_10120295Not Available1542Open in IMG/M
3300006917|Ga0075472_10283886Not Available816Open in IMG/M
3300007544|Ga0102861_1011635All Organisms → Viruses → Predicted Viral2111Open in IMG/M
3300008266|Ga0114363_1004529Not Available7275Open in IMG/M
3300009051|Ga0102864_1013885All Organisms → Viruses → Predicted Viral2064Open in IMG/M
3300009068|Ga0114973_10040407All Organisms → Viruses → Predicted Viral2786Open in IMG/M
3300009068|Ga0114973_10139633All Organisms → Viruses → Predicted Viral1353Open in IMG/M
3300009154|Ga0114963_10022734All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes4167Open in IMG/M
3300009155|Ga0114968_10065467All Organisms → Viruses → Predicted Viral2292Open in IMG/M
3300009155|Ga0114968_10210077Not Available1123Open in IMG/M
3300009158|Ga0114977_10188280Not Available1215Open in IMG/M
3300009158|Ga0114977_10351823Not Available829Open in IMG/M
3300009159|Ga0114978_10034865All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3569Open in IMG/M
3300009159|Ga0114978_10068285All Organisms → Viruses → Predicted Viral2397Open in IMG/M
3300009159|Ga0114978_10191425All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales1297Open in IMG/M
3300009159|Ga0114978_10519944Not Available696Open in IMG/M
3300009161|Ga0114966_10588123Not Available622Open in IMG/M
3300009163|Ga0114970_10428032Not Available732Open in IMG/M
3300009164|Ga0114975_10071846All Organisms → Viruses → Predicted Viral2019Open in IMG/M
3300009180|Ga0114979_10127819All Organisms → Viruses → Predicted Viral1562Open in IMG/M
3300009182|Ga0114959_10174537All Organisms → Viruses → Predicted Viral1127Open in IMG/M
3300009183|Ga0114974_10078384All Organisms → Viruses → Predicted Viral2155Open in IMG/M
3300009183|Ga0114974_10235453All Organisms → Viruses → Predicted Viral1102Open in IMG/M
3300010160|Ga0114967_10181083Not Available1147Open in IMG/M
3300010354|Ga0129333_11572294Not Available537Open in IMG/M
3300013004|Ga0164293_10245946All Organisms → Viruses → Predicted Viral1266Open in IMG/M
3300013005|Ga0164292_10104579All Organisms → Viruses → Predicted Viral2128Open in IMG/M
3300013006|Ga0164294_10301696All Organisms → Viruses → Predicted Viral1111Open in IMG/M
3300013372|Ga0177922_10298699Not Available1043Open in IMG/M
3300013372|Ga0177922_10490821Not Available666Open in IMG/M
3300013372|Ga0177922_11290106Not Available614Open in IMG/M
3300017722|Ga0181347_1157999Not Available616Open in IMG/M
3300017723|Ga0181362_1067667Not Available728Open in IMG/M
3300017761|Ga0181356_1008846All Organisms → Viruses → Predicted Viral3900Open in IMG/M
3300017761|Ga0181356_1013101All Organisms → Viruses → Predicted Viral3129Open in IMG/M
3300017766|Ga0181343_1062325All Organisms → Viruses → Predicted Viral1084Open in IMG/M
3300017766|Ga0181343_1116591Not Available752Open in IMG/M
3300017766|Ga0181343_1130020Not Available706Open in IMG/M
3300017766|Ga0181343_1204791Not Available540Open in IMG/M
3300017774|Ga0181358_1006955All Organisms → Viruses → Predicted Viral4787Open in IMG/M
3300017777|Ga0181357_1002970All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium6789Open in IMG/M
3300017777|Ga0181357_1059892All Organisms → Viruses → Predicted Viral1474Open in IMG/M
3300017784|Ga0181348_1009388All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium4264Open in IMG/M
3300017784|Ga0181348_1184225Not Available759Open in IMG/M
3300020160|Ga0211733_11226092Not Available587Open in IMG/M
3300020162|Ga0211735_10762739Not Available503Open in IMG/M
3300020162|Ga0211735_10937945Not Available630Open in IMG/M
3300020172|Ga0211729_11381794All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2020Open in IMG/M
3300020172|Ga0211729_11410221All Organisms → Viruses → Predicted Viral1539Open in IMG/M
3300020205|Ga0211731_11057229All Organisms → Viruses → Predicted Viral1267Open in IMG/M
3300020205|Ga0211731_11390759Not Available648Open in IMG/M
3300021438|Ga0213920_1012878All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2334Open in IMG/M
3300021961|Ga0222714_10021070All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5088Open in IMG/M
3300021962|Ga0222713_10024329All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5008Open in IMG/M
3300021963|Ga0222712_10122306All Organisms → Viruses → Predicted Viral1791Open in IMG/M
3300022407|Ga0181351_1027361Not Available2423Open in IMG/M
3300022407|Ga0181351_1231521Not Available591Open in IMG/M
3300023174|Ga0214921_10420516Not Available673Open in IMG/M
3300023184|Ga0214919_10000794All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes53984Open in IMG/M
3300025872|Ga0208783_10431420Not Available504Open in IMG/M
3300027205|Ga0208926_1005953All Organisms → Viruses → Predicted Viral1794Open in IMG/M
3300027608|Ga0208974_1046265Not Available1262Open in IMG/M
3300027608|Ga0208974_1095817Not Available796Open in IMG/M
3300027608|Ga0208974_1107906Not Available737Open in IMG/M
3300027659|Ga0208975_1040114Not Available1465Open in IMG/M
3300027708|Ga0209188_1000034All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales153186Open in IMG/M
3300027710|Ga0209599_10170330All Organisms → Viruses583Open in IMG/M
3300027734|Ga0209087_1009240All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5113Open in IMG/M
3300027734|Ga0209087_1068955All Organisms → Viruses → Predicted Viral1562Open in IMG/M
3300027734|Ga0209087_1130221Not Available1032Open in IMG/M
3300027736|Ga0209190_1003316Not Available10689Open in IMG/M
3300027741|Ga0209085_1000007All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae146310Open in IMG/M
3300027746|Ga0209597_1300294Not Available616Open in IMG/M
3300027747|Ga0209189_1000245All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes47171Open in IMG/M
3300027759|Ga0209296_1000110All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage66220Open in IMG/M
3300027759|Ga0209296_1013872All Organisms → Viruses → Predicted Viral4747Open in IMG/M
3300027759|Ga0209296_1246680Not Available737Open in IMG/M
3300027759|Ga0209296_1295992Not Available645Open in IMG/M
3300027763|Ga0209088_10008266All Organisms → cellular organisms → Bacteria → Proteobacteria5737Open in IMG/M
3300027782|Ga0209500_10060692All Organisms → Viruses → Predicted Viral1982Open in IMG/M
3300027782|Ga0209500_10254872Not Available763Open in IMG/M
3300027805|Ga0209229_10048537Not Available1891Open in IMG/M
3300027808|Ga0209354_10297899Not Available642Open in IMG/M
3300028025|Ga0247723_1027339All Organisms → Viruses → Predicted Viral1841Open in IMG/M
3300028025|Ga0247723_1047471All Organisms → Viruses → Predicted Viral1245Open in IMG/M
3300028025|Ga0247723_1086840Not Available813Open in IMG/M
3300028025|Ga0247723_1121182Not Available639Open in IMG/M
3300031786|Ga0315908_11107850Not Available633Open in IMG/M
3300031951|Ga0315904_10071701Not Available3748Open in IMG/M
3300034022|Ga0335005_0230264All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1134Open in IMG/M
3300034061|Ga0334987_0666410Not Available602Open in IMG/M
3300034062|Ga0334995_0104140All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Pelagibius → Pelagibius marinus2144Open in IMG/M
3300034062|Ga0334995_0158417Not Available1625Open in IMG/M
3300034066|Ga0335019_0107570All Organisms → Viruses → Predicted Viral1865Open in IMG/M
3300034071|Ga0335028_0452371Not Available721Open in IMG/M
3300034082|Ga0335020_0024093All Organisms → Viruses → Predicted Viral3406Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake31.78%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake15.89%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater11.21%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater9.35%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic7.48%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous3.74%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment3.74%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine2.80%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.80%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater1.87%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.93%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater0.93%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater0.93%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment0.93%
LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic0.93%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton0.93%
FreshwaterEnvironmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater0.93%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.93%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.93%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002092Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenomeEnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300004112Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)EnvironmentalOpen in IMG/M
3300004461Marine viral communities from Newfoundland, Canada BC-2EnvironmentalOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300004772Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0.5MEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300006641Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006917Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300007544Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3EnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300009051Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02EnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009154Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaGEnvironmentalOpen in IMG/M
3300009155Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaGEnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009163Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaGEnvironmentalOpen in IMG/M
3300009164Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaGEnvironmentalOpen in IMG/M
3300009180Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaGEnvironmentalOpen in IMG/M
3300009182Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaGEnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300010160Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaGEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013005Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaGEnvironmentalOpen in IMG/M
3300013006Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaGEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017722Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017723Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017761Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017784Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300020160Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1EnvironmentalOpen in IMG/M
3300020162Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1EnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300020205Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1EnvironmentalOpen in IMG/M
3300021438Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17 MGEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300023174Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505EnvironmentalOpen in IMG/M
3300023184Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503EnvironmentalOpen in IMG/M
3300025872Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027205Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3 (SPAdes)EnvironmentalOpen in IMG/M
3300027608Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027659Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027708Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027710Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)EnvironmentalOpen in IMG/M
3300027734Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027736Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027741Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027746Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027747Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027759Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027763Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027782Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027805Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)EnvironmentalOpen in IMG/M
3300027808Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)EnvironmentalOpen in IMG/M
3300028025Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FCEnvironmentalOpen in IMG/M
3300031786Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300034022Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058EnvironmentalOpen in IMG/M
3300034061Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034066Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087EnvironmentalOpen in IMG/M
3300034071Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110EnvironmentalOpen in IMG/M
3300034082Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24218J26658_1000680113300002092LenticMNFALMIYTVVAMSGQNSSLVQAHDWRYLTTHHTLESCKDAAKTMGISTERFRCVASK*
B570J40625_10082454013300002835FreshwaterMMGNFALMIYTVVAMSGSNASLVQAHDWRYLTTHHSLESCKDAAKTMGISSERYRCVGAK
Ga0065166_1023754933300004112Freshwater LakeMNFALVIFTVVAMSGKNADLVQARDWRPVANFTTVELCNDAAHLMGISSERYRCVRLTKF
Ga0066223_104366063300004461MarineMNFALMIYTVVAMSGSNASLTQAHDWRYLTTFYSMEQCQSAAKSMGITTERYRCVAAK*
Ga0069718_1371420613300004481SedimentMNFALMIYTVVAMSGSNSSLVQAHDWRYLTTFTSQERCVEAAKIMGISTERFRCVAAK*
Ga0007791_1017921633300004772FreshwaterMNYALMIYTVVAMSGQNASLVQARDWRYLASFYTQERCVEAAKVMGISNERYRCVAVASR
Ga0049081_1006572013300005581Freshwater LenticMGNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKDAAKTMGISTERYRCVAAR*
Ga0049081_1008731333300005581Freshwater LenticMNFALMIYTVVAMSGQNASLVQAHDWRYLTTHHTLESCKEAAKTMGISTERFRCVAAR*
Ga0049080_1000653743300005582Freshwater LenticMNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKDAAKTMGISSERYRCVAAR*
Ga0049080_1007813243300005582Freshwater LenticMNFALMIYTVVAMSGSNASLTQARDWRYLTTHHTLENCQAAAKSMGISSERYRCVGVK*
Ga0075471_1014020033300006641AqueousMNYALIIYTVVAMSGQNSSLVQAHDWRYLTSFYTQEHCVAAAKVMGISNERYRCIPHAR*
Ga0070749_1012029513300006802AqueousRRMNYALMIYTVVAMSGQNASLTQARDWRYLTTFPSQERCVEAAKIMGISSERFRCVVAR
Ga0075472_1028388643300006917AqueousMNYALIIYTIVAMSGQNASLVQAHDWRYLTSFYKQEHCVEAAKIMGISNERYRCIPHAR*
Ga0102861_101163563300007544EstuarineMNFALMIYTVVAMSGQNASLTPAHDWRPLTTHYTLESCLNAAKIMGISSERFRCVPSK*
Ga0114363_1004529103300008266Freshwater, PlanktonMGNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKDAAKTMGISTERYRCVPVASR*
Ga0102864_101388513300009051EstuarineMNFALMIYTVVAMSGQNASLTPAHDWRPLTTHYTLESCLNAAKIMGISS
Ga0114973_1004040773300009068Freshwater LakeMGNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKDAAKTMGISSERYRCVVAK*
Ga0114973_1013963323300009068Freshwater LakeMNFALMIYTVVAMSGSNASLVHAHDWRYLTTHYTLENCQLAAKSMGIASERYRCVGVK*
Ga0114963_10022734133300009154Freshwater LakeMNFALMIYTVVAMSGQNASLVQAHDWRPLTTHYTLESCLNAAKIMGISSERFRCVPSK*
Ga0114968_1006546753300009155Freshwater LakeMMNFALMIYTVVAMSGSNASLTQAHDWRYLTTFYSMEQCQSAAKSMGITTERYRCVAAK*
Ga0114968_1021007743300009155Freshwater LakeMNFALLIYTVVAMSGQNADLAQARDWRYLTTHYTLENCQAAAKSMGISSERYRCVEVK*
Ga0114977_1018828023300009158Freshwater LakeMEMNFALMIYTVVAMSGSNASLTQAHDWRYLTTHYTLENCQAAAKSMGIASERYRCVGVK
Ga0114977_1035182323300009158Freshwater LakeMNYALMIYTVVAMSGSNASLTQAHDWRYLTTHYTMENCQAAAKSMGIASERYRCVGVK*
Ga0114978_1003486553300009159Freshwater LakeMEMNFALMIYTVVAMSGSNASLVQAHDWRHLASFYTQERCVEAAKAMGISSERYRCVPVAIR*
Ga0114978_1006828543300009159Freshwater LakeMGNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKNAAKTMGISSERYRCVDAR*
Ga0114978_1019142523300009159Freshwater LakeMNFALMIYTVVAMSGQNSSLVQAHDWRYLTTHHTLESCKDAAKLMSISTERFRCVPAK*
Ga0114978_1051994423300009159Freshwater LakeMMGNFALMIYTVVAMSGQNANLTPAHDWRYLTTHHSLESCKNAAKTMGISSERYRCVDAR
Ga0114966_1058812313300009161Freshwater LakeMGNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKDAAKTMGISSERYRCVV
Ga0114970_1042803223300009163Freshwater LakeMNYALMIYTVVAMSGSNASLTQAHDWRYLTTHYTLENCQLAAKSMGIASERYRCVGVK*
Ga0114975_1007184663300009164Freshwater LakeMNFALVIYTVVAMSGKNADLVQARDWRPVASFSTVELCNDAAHLMGISSERYRCVRLTK*
Ga0114979_1012781913300009180Freshwater LakeMNYALMIYTVVAMSGSNASLVHAHDWRYLTTHYTLENCQLAAKSMGIASERYRCVGVK*
Ga0114959_1017453733300009182Freshwater LakeMNFALVIYTVVAMSGKNADLVQARDWRLIANFTTVELCNDAAHLMGISSERYRCVRLTK*
Ga0114974_1007838443300009183Freshwater LakeMNYALMIYTVVAMSGSNASLTQAHDWRYLTTHYTLENCQAAAKSMGIASERYRCVGVK*
Ga0114974_1023545353300009183Freshwater LakeMMGNFALMIYTVVAMSGQNANLTPAHDWRYLTTHHSLESCKNAAKTMGISSERYRC
Ga0114967_1018108333300010160Freshwater LakeYTVVAMSGQNASLVQAHDWRPLTTHYTLESCLNAAKIMGISSERFRCVPSK*
Ga0129333_1157229413300010354Freshwater To Marine Saline GradientMNYALIIYTIVAMSGQNASLVQAHDWRYLTSFYTQERCVEAAKVMGISNERYRCIAHAR*
Ga0164293_1024594653300013004FreshwaterMNFALMIYTVVAMSGSNASLVHAHDWRYLTTHYTLENCQLAAKSMGIAAERYRCVGVK*
Ga0164292_1010457933300013005FreshwaterMNYALMIYTVVAMSGSNASLVHAHDWRYLTTHYTLENCQLAAKSMGIAAERYRCVGVK*
Ga0164294_1030169613300013006FreshwaterMGNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKNAAKTMGISS
Ga0177922_1029869933300013372FreshwaterYTVVAMSGSNASLTQARDWRYLTTHHTLENCQAAAKSMGISSERYRCVGVK*
Ga0177922_1049082133300013372FreshwaterMSNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKDAAKTMGISSERYRCVAAR*
Ga0177922_1129010633300013372FreshwaterIYTIVAMSGSNASLVQAHDWRLLTTHYTLESCLNAAKIMGISSERFRCVPSK*
Ga0181347_115799933300017722Freshwater LakeMGNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKDAAKAMGISSERYRCV
Ga0181362_106766743300017723Freshwater LakeMGNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKDAAKTMGISSERYRC
Ga0181356_1008846123300017761Freshwater LakeMNFALMIYTVVAMSGQNASLVQAHDWRYLASFYTQERCVEAAKIMGISSERYRCVPVAIR
Ga0181356_1013101123300017761Freshwater LakeMNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKDAAKTMGISSERYRCVG
Ga0181343_106232523300017766Freshwater LakeMNFALMIYTVVAMSGQNANLTPAHDWRPLTTHYTLESCLNAAKIMGISSERFRCVPSK
Ga0181343_111659123300017766Freshwater LakeMNFALMIYTVVAMSGSNASLTQAHDWRYLASFYTQERCVEAAKVMGISNERYRCVAVASR
Ga0181343_113002023300017766Freshwater LakeMNFALMIYTIVAMSGSNASLVQAHDWRYLTTHHTLESCKDAAKIMGISSERFRCVPAK
Ga0181343_120479123300017766Freshwater LakeMNFALMIYTVVAMSGQNASLVQAHDWRYLASFYTQERCVEAAKIMGISNERYRCIAHAR
Ga0181358_1006955123300017774Freshwater LakeMNFTLMIYTVVAMSGQNASLVQAHDWRYLASFYTQERCVEAAKIMGISSERYRCVPVAIR
Ga0181357_1002970113300017777Freshwater LakeMNYALMIYTVVAMSGSNSDLAQARDWRYLTTHHTLENCQAAAKSMGISSERYRCVGVK
Ga0181357_105989273300017777Freshwater LakeMSNFALMIYTVVAMSGQNANLTPAHDWRYLTTHHSLESCKNAAKTMGISSERYRCVEAR
Ga0181348_1009388123300017784Freshwater LakeMNYALMIYTVVAMSGSNASLVHAHDWRYLTTHYTLENCQLAAKSMGISSERYRCVGVK
Ga0181348_118422513300017784Freshwater LakeMNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKDAAKTMGISSERYRCVGAK
Ga0211733_1122609223300020160FreshwaterMNFALMIYTVVAMSGQNASLVQAHDWRYLTTHHTLESCREAAKTMGISTERFRCVAAR
Ga0211735_1076273913300020162FreshwaterMMGNFALMIYTIVAMAGNSADPATARDWRYLTTFYTVEQCQAAAKSMGITPERYRCVVAK
Ga0211735_1093794523300020162FreshwaterMNFALIIYTVVAMSGSNASLVQAHDWRYLTTFTSQERCVEAAKTMGISTERFRCVAAR
Ga0211729_1138179463300020172FreshwaterMNFALVIFTVVAMSGQNASLVQAHDWRLVANFSTVELCNDAAHLMGISSERYRCVRLTK
Ga0211729_1141022143300020172FreshwaterMNFALMIYTVVAMSGQNASLVQAHDWRYLTTHHTLESCKEAAKTMGISTERFRCVAAR
Ga0211731_1105722933300020205FreshwaterMNFALIIYTVVAMSGSNASLVQAHDWRYLTTHHTLESCREAAKTMGISTERFRCVAAR
Ga0211731_1139075923300020205FreshwaterMNFTLMIYTVVAMSGQNASLAQAHDWRPLTTHYTLESCLNASKIMGISSERFRCVPSK
Ga0213920_101287853300021438FreshwaterMNYALMIYTVVAMTGQNSFSMVQAHDWRYLTSFYTQERCVEAAKVMGISNERYRCIAHAR
Ga0222714_10021070143300021961Estuarine WaterMNYALMIYTVVAMSGQNASLTQARDWRYLTTFPSQERCVEAAKIMGISTERFRCVVAR
Ga0222713_1002432973300021962Estuarine WaterMNYALMIYTVVAMSGQNASLTQARDWRYLTTFPSQERCVEAAKIMGISSERFRCVVAR
Ga0222712_1012230633300021963Estuarine WaterMNFALIVYTVVAMSGSNASLVQAHDWRYITSFYTQERCVEAAKVMGISNERYRCVAHAR
Ga0181351_102736143300022407Freshwater LakeMNYALMIYTVVAMSGSNSDLAQARDWRYLTTHYTLENCQSAAKSMGISSERYRCVGVK
Ga0181351_123152123300022407Freshwater LakeMGNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKNAAKTMGISSERYRCVEAR
Ga0214921_1042051623300023174FreshwaterMNYALIIYTVVAMTGQNSFSMVQAHDWRYLTTHYTLESCQAAAKSMGITAERYRCVGVK
Ga0214919_10000794533300023184FreshwaterMNYALMIYTVVAMSGSNASLVQAHDWRYLATFYSSEQCKDAAKTMGISSERYRCVPAK
Ga0208783_1043142023300025872AqueousLIIYTVVAMSGQNSSLVQAHDWRYLTSFYTQEHCVAAAKVMGISNERYRCIPHAR
Ga0208926_100595333300027205EstuarineMNFALMIYTVVAMSGQNASLTPAHDWRPLTTHYTLESCLNAAKIMGISSERFRCVPSK
Ga0208974_104626523300027608Freshwater LenticMNFALMIYTVVAMSGSNASLTQARDWRYLTTHHTLENCQAAAKSMGISSERYRCVGVK
Ga0208974_109581723300027608Freshwater LenticMNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKDAAKTMGISSERYRCVAAR
Ga0208974_110790623300027608Freshwater LenticMGNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKDAAKTMGISTERYRCVAAR
Ga0208975_104011463300027659Freshwater LenticMGNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKDAAKTMGISSERYRCVAAR
Ga0209188_1000034403300027708Freshwater LakeMNYALILYTVVAMSGHNSTLTKAYDWRYLTTFANHERCVDAANLMGISSERYRCVAVVMK
Ga0209599_1017033033300027710Deep SubsurfaceMNFALMIYTVVAMSGQNASLVQARDWRYLSTFYTQERCVEAAKVMGISNERYRCVPVAVR
Ga0209087_100924093300027734Freshwater LakeMEMNFALMIYTVVAMSGSNASLVQAHDWRHLASFYTQERCVEAAKAMGISSERYRCVPVAIR
Ga0209087_106895523300027734Freshwater LakeMGNFALMIYTVVAMSGQNANLTPAHDWRYLTTHHSLESCKNAAKTMGISSERYRCVDAR
Ga0209087_113022123300027734Freshwater LakeMNYALMIYTVVAMSGSNASLTQAHDWRYLTTHYTMENCQAAAKSMGIASERYRCVGVK
Ga0209190_1003316253300027736Freshwater LakeGKMGNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKDAAKTMGISSERYRCVVA
Ga0209085_10000071723300027741Freshwater LakeMNFALMIYTVVAMSGQNASLVQAHDWRPLTTHYTLESCLNAAKIMGISSERFRCVPSK
Ga0209597_130029413300027746Freshwater LakeMGNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKDAAKTMGISSERYRCVVAK
Ga0209189_1000245313300027747Freshwater LakeMIYTVVAMSGQNASLVQAHDWRPLTTHYTLESCLNAAKIMGISSERFRCVPSK
Ga0209296_1000110723300027759Freshwater LakeMNFALVIYTVVAMSGKNADLVQARDWRPVASFSTVELCNDAAHLMGISSERYRCVRLTK
Ga0209296_101387233300027759Freshwater LakeMNYALMIYTVVAMSGSNASLTQAHDWRYLTTHYTLENCQAAAKSMGIASERYRCVGVK
Ga0209296_124668023300027759Freshwater LakeMNFALMIYTVVAMSGSNASLVQAHDWRHLASFYTQERCVEAAKAMGISSERYRCVPVAIR
Ga0209296_129599233300027759Freshwater LakeRRIMMNYALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKNAAKTMGISSERYRCVDAR
Ga0209088_10008266153300027763Freshwater LakeMGNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKNAAKTMGISSERYRCVDAR
Ga0209500_1006069213300027782Freshwater LakeMNFALMIYTVVAMSGSNASLVHAHDWRYLTTHYTLENCQLAAKSMGIASERYRCVGVK
Ga0209500_1025487233300027782Freshwater LakeMGNFALMIYTVVAMSGQNANLTPAHDWRYLTTHHSLESCKNAAKTMGISSERYRCVDA
Ga0209229_1004853763300027805Freshwater And SedimentMNFALMIYTVVAMSGSNASLTQAHDWRYLASFYTQERCVEAAKIMGISNERYRCVAVASR
Ga0209354_1029789923300027808Freshwater LakeMGNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKDAAKTMGISSERYRCVGAK
Ga0247723_102733953300028025Deep Subsurface SedimentMNFALMIYTVVAMSGSNASLVQAHDWRYLTTFTSQERCVEAAKIMGISTERFRCVAAK
Ga0247723_104747133300028025Deep Subsurface SedimentMNFALMIYTVVAMSGSNASLVQARDWRYLSSFYTQERCVEAAKVMGISSERYRCVPAAVR
Ga0247723_108684043300028025Deep Subsurface SedimentMNFALMIYTVVAMSGQNASLVQAHDWRYLATFYNQERCVEAAKVMGISNERYRCVAVAR
Ga0247723_112118233300028025Deep Subsurface SedimentMNFALMIYTVVAMSGQNSSLVQAHDWRYLTTHHTLESCKDAAKIMGISSERFRCVPAK
Ga0315908_1110785023300031786FreshwaterMGNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKDAAKTMGISTERYRCVPVAS
Ga0315904_1007170193300031951FreshwaterMGNFALMIYTVVAMSGQNASLTPAHDWRYLTTHHSLESCKDAAKTMGISSERYRCVPVAS
Ga0335005_0230264_727_9123300034022FreshwaterMNFALVIYTVVAMSGSNASLVQARDWRPVANFSTVEFCNDAAHLMGISSERYRCVRLAGF
Ga0334987_0666410_316_4983300034061FreshwaterMMGNFALMIYTVVAMSGSNASLVQAHDWRYLTTHHSLENCRDAAKTMGISTERYRCVGAK
Ga0334995_0104140_1871_20473300034062FreshwaterMNFALMIYTVVAMSGSNSDLAQARDWRHLTTHYTLENCQAAAKSMGIASERYRCVGVK
Ga0334995_0158417_534_7133300034062FreshwaterMGNFALMIYTVVAMSGSNASLVQAHDWRYLTTHHSLESCKDAAKTMGISSERYRCVGAK
Ga0335019_0107570_129_3053300034066FreshwaterMNFALMIYTVVAMSGSNASLVHAHDWRYLTTHYTLENCQLAAKSMGIAAERYRCVGVK
Ga0335028_0452371_395_5713300034071FreshwaterMNYALMIYTVVAMSGSNADLAQARDWRYLTTHYTLENCQSAAKSMGIASERYRCVGVK
Ga0335020_0024093_2020_21963300034082FreshwaterMNFALMIYTVVAMSGSNASLVQAHDWRYLATFYSVEGCKDAAKTMGISSERYRCVPAK


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