Metagenome / Metatranscriptome Family F091898

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091898
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	97 residues
Representative Sequence	MFMGRVNGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEEFIVRKRNALQQQGISLLTIEVQPQDINIH
Number of Associated Samples	83
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.57 %
% of genes near scaffold ends (potentially truncated)	29.91 %
% of genes from short scaffolds (< 2000 bps)	74.77 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.458 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (15.888 % of family members)
Environment Ontology (ENVO)	Unclassified (37.383 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.794 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.31% β-sheet: 37.11% Coil/Unstructured: 52.58%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00004	AAA	21.50
PF03743	TrbI	19.63
PF01541	GIY-YIG	0.93
PF07728	AAA_5	0.93
PF14454	Prok_Ub	0.93
PF01464	SLT	0.93
PF08719	NADAR	0.93
PF16657	Malt_amylase_C	0.93
PF06067	DUF932	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2948	Type IV secretory pathway, VirB10 component	Intracellular trafficking, secretion, and vesicular transport [U]	19.63
COG3236	N-glycosidase YbiA/RibX (riboflavin biosynthesis, damage control), NADAR superfamily	Defense mechanisms [V]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.46 %
Unclassified	root	N/A	6.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.46 %
Unclassified	root	N/A	6.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.46 %
Unclassified	root	N/A	6.54 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	42.06 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	41.12 %
Unclassified	root	N/A	6.54 %

Name	Rank	Taxonomy	Distribution
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	41.12 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	21.50 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	17.76 %
Unclassified	root	N/A	6.54 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	41.12 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.50 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	17.76 %
Unclassified	root	N/A	6.54 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	41.12 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.50 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	17.76 %
Unclassified	root	N/A	6.54 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	41.12 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.50 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	17.76 %
Unclassified	root	N/A	6.54 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	41.12 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.50 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	17.76 %
Unclassified	root	N/A	6.54 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003218\|JGI26339J46600_10017508	All Organisms → cellular organisms → Bacteria → Acidobacteria	2081	Open in IMG/M
3300003218\|JGI26339J46600_10020390	All Organisms → cellular organisms → Bacteria	1925	Open in IMG/M
3300003218\|JGI26339J46600_10027555	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1616	Open in IMG/M
3300003218\|JGI26339J46600_10035182	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1398	Open in IMG/M
3300003218\|JGI26339J46600_10152164	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	537	Open in IMG/M
3300003368\|JGI26340J50214_10026807	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1738	Open in IMG/M
3300004080\|Ga0062385_11189751	Not Available	521	Open in IMG/M
3300005610\|Ga0070763_10349321	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	823	Open in IMG/M
3300006642\|Ga0075521_10672448	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	511	Open in IMG/M
3300006795\|Ga0075520_1139479	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1067	Open in IMG/M
3300009519\|Ga0116108_1042337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1467	Open in IMG/M
3300009616\|Ga0116111_1000053	All Organisms → cellular organisms → Bacteria	108075	Open in IMG/M
3300009628\|Ga0116125_1009995	All Organisms → cellular organisms → Bacteria	2447	Open in IMG/M
3300009641\|Ga0116120_1059396	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1301	Open in IMG/M
3300010339\|Ga0074046_10038761	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	3213	Open in IMG/M
3300010339\|Ga0074046_10088496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2006	Open in IMG/M
3300010339\|Ga0074046_10236873	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1137	Open in IMG/M
3300010341\|Ga0074045_10794241	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	599	Open in IMG/M
3300010343\|Ga0074044_10406086	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	892	Open in IMG/M
3300010343\|Ga0074044_10428665	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	866	Open in IMG/M
3300010343\|Ga0074044_10561999	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	745	Open in IMG/M
3300010376\|Ga0126381_100738779	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300010379\|Ga0136449_100669674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1748	Open in IMG/M
3300010379\|Ga0136449_100747881	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1628	Open in IMG/M
3300010379\|Ga0136449_101515921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1025	Open in IMG/M
3300010379\|Ga0136449_102964699	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	664	Open in IMG/M
3300014155\|Ga0181524_10096877	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1659	Open in IMG/M
3300014156\|Ga0181518_10009206	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	7791	Open in IMG/M
3300014156\|Ga0181518_10402251	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	662	Open in IMG/M
3300014159\|Ga0181530_10481430	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	621	Open in IMG/M
3300014162\|Ga0181538_10009339	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	7892	Open in IMG/M
3300014164\|Ga0181532_10003759	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	13552	Open in IMG/M
3300014164\|Ga0181532_10004960	All Organisms → cellular organisms → Bacteria	11448	Open in IMG/M
3300014164\|Ga0181532_10133038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1514	Open in IMG/M
3300014165\|Ga0181523_10134858	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1462	Open in IMG/M
3300014165\|Ga0181523_10377362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300014200\|Ga0181526_10045517	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2807	Open in IMG/M
3300014322\|Ga0075355_1189204	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	567	Open in IMG/M
3300014492\|Ga0182013_10372968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300014493\|Ga0182016_10540332	Not Available	669	Open in IMG/M
3300014493\|Ga0182016_10678078	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	580	Open in IMG/M
3300014501\|Ga0182024_10430970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1697	Open in IMG/M
3300014657\|Ga0181522_10588920	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	674	Open in IMG/M
3300014838\|Ga0182030_11548851	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	545	Open in IMG/M
3300015206\|Ga0167644_1111609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300016750\|Ga0181505_10876368	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	3255	Open in IMG/M
3300017935\|Ga0187848_10018186	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	3760	Open in IMG/M
3300017948\|Ga0187847_10477132	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	690	Open in IMG/M
3300017955\|Ga0187817_11136667	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	502	Open in IMG/M
3300017961\|Ga0187778_10005351	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	8344	Open in IMG/M
3300017972\|Ga0187781_10773402	Not Available	696	Open in IMG/M
3300017998\|Ga0187870_1096790	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1148	Open in IMG/M
3300018003\|Ga0187876_1000015	All Organisms → cellular organisms → Bacteria	153788	Open in IMG/M
3300018008\|Ga0187888_1086698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1354	Open in IMG/M
3300018019\|Ga0187874_10419144	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	540	Open in IMG/M
3300018040\|Ga0187862_10000428	All Organisms → cellular organisms → Bacteria	49043	Open in IMG/M
3300018047\|Ga0187859_10812969	Not Available	537	Open in IMG/M
3300019787\|Ga0182031_1068483	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1159	Open in IMG/M
3300019787\|Ga0182031_1086623	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	961	Open in IMG/M
3300021405\|Ga0210387_10210504	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300021406\|Ga0210386_11773653	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	508	Open in IMG/M
3300024295\|Ga0224556_1018157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1792	Open in IMG/M
3300025432\|Ga0208821_1056210	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	697	Open in IMG/M
3300025460\|Ga0208562_1117128	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	503	Open in IMG/M
3300025553\|Ga0208080_1064155	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	876	Open in IMG/M
3300025650\|Ga0209385_1130042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300025725\|Ga0209638_1185549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300027394\|Ga0209904_1000933	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2537	Open in IMG/M
3300027812\|Ga0209656_10207675	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	946	Open in IMG/M
3300027825\|Ga0209039_10050821	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1887	Open in IMG/M
3300027825\|Ga0209039_10070032	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1553	Open in IMG/M
3300027855\|Ga0209693_10377326	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	686	Open in IMG/M
3300028788\|Ga0302189_10067674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1706	Open in IMG/M
3300028873\|Ga0302197_10180825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	996	Open in IMG/M
3300028906\|Ga0308309_10088056	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2368	Open in IMG/M
3300029883\|Ga0311327_10068840	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2714	Open in IMG/M
3300029952\|Ga0311346_10330575	All Organisms → cellular organisms → Bacteria	1539	Open in IMG/M
3300029999\|Ga0311339_10263025	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1888	Open in IMG/M
3300030007\|Ga0311338_11388817	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	654	Open in IMG/M
3300031233\|Ga0302307_10089756	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1612	Open in IMG/M
3300031524\|Ga0302320_11196640	Not Available	779	Open in IMG/M
3300031525\|Ga0302326_11220756	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1032	Open in IMG/M
3300032160\|Ga0311301_10396362	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2118	Open in IMG/M
3300032160\|Ga0311301_10743995	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1364	Open in IMG/M
3300032173\|Ga0315268_10009905	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	9865	Open in IMG/M
3300032770\|Ga0335085_11387656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300032782\|Ga0335082_10520356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1052	Open in IMG/M
3300032782\|Ga0335082_10575824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	987	Open in IMG/M
3300032783\|Ga0335079_10115979	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	3025	Open in IMG/M
3300032783\|Ga0335079_10653890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1103	Open in IMG/M
3300032805\|Ga0335078_10340999	All Organisms → cellular organisms → Bacteria → Acidobacteria	1995	Open in IMG/M
3300032828\|Ga0335080_10793815	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	979	Open in IMG/M
3300032829\|Ga0335070_10395570	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1323	Open in IMG/M
3300032829\|Ga0335070_10448641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1228	Open in IMG/M
3300032892\|Ga0335081_10084729	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	4780	Open in IMG/M
3300032892\|Ga0335081_12125748	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	594	Open in IMG/M
3300032893\|Ga0335069_10488954	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300032893\|Ga0335069_12730008	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	507	Open in IMG/M
3300032897\|Ga0335071_10431632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1271	Open in IMG/M
3300032954\|Ga0335083_11316471	Not Available	555	Open in IMG/M
3300033134\|Ga0335073_11488004	Not Available	654	Open in IMG/M
3300033158\|Ga0335077_10226377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2085	Open in IMG/M
3300033402\|Ga0326728_10000413	All Organisms → cellular organisms → Bacteria → Acidobacteria	167377	Open in IMG/M
3300033818\|Ga0334804_004476	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	6595	Open in IMG/M
3300033822\|Ga0334828_025039	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1822	Open in IMG/M
3300033887\|Ga0334790_001644	All Organisms → cellular organisms → Bacteria	18511	Open in IMG/M
3300034065\|Ga0334827_009826	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	4268	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.55%
Aquatic	Environmental → Aquatic	36.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.53%
Freshwater	Environmental → Aquatic → Freshwater	36.45%
Peat	Environmental → Terrestrial → Peat	14.02%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	35.51%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	32.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	14.02%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.02%
Loam	Environmental → Terrestrial → Soil → Loam	2.80%
Lake	Environmental → Aquatic → Freshwater → Lake	0.93%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	28.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	25.23%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.48%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	7.48%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.61%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.93%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	15.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	11.21%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	9.35%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.41%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	6.54%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.61%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.61%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	5.61%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	4.67%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	4.67%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.67%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.74%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.87%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.93%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.93%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014322	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025432	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40 (SPAdes)	Environmental	Open in IMG/M
3300025460	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes)	Environmental	Open in IMG/M
3300025553	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300027394	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712P3D	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M
3300033822	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26339J46600_100175082	3300003218	Bog Forest Soil	MGRVNGINQYKHGITRTYLYLDDAGRCYLKAERGGYVPGNWGVELGKMEACLARLDASLATPYDEEFIVRKRNALQQQGISLLTIEVQPHDINIH*
JGI26339J46600_100203902	3300003218	Bog Forest Soil	MGRVNGINQYKHGITRTYLYLDDAGNCYLKAEKGGFVPGNWGVELGKMEACLARLDASLATPYDEEFVLRKRNALQQQGISLLTIEVQPQDINIH*
JGI26339J46600_100275552	3300003218	Bog Forest Soil	MGRVNGINQYKHGITRTYLYLDDAGNCYLKAEKGGYTPGNWGVELGKLEACLARLDASLATPYDEEFIVRKRKALQQQGISLLTIEVKPRDINIH*
JGI26339J46600_100351821	3300003218	Bog Forest Soil	MGRVNGINQYKHGITRTYLYLDDAGNCYLKAEKGGYTPGNWGVELSKMEACLARLDASLATPYDEEFIVRKRNALQQQGISLLTIKVQPHDTNIH*
JGI26339J46600_101521641	3300003218	Bog Forest Soil	MGRVNGINQYKHGITRTYLYLDDASNCYLKAEKGGYVPGNWGVELGKMEACLARLDSSLATPYDEEFIVRKRNALQQQGIPLLTIEVQPQDINIH*
JGI26340J50214_100268072	3300003368	Bog Forest Soil	MYMGRVNGINQYKHGITRTYLYLDDAGRCYLKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEEFIVRKRNALQQQGISLLTIEVQPHDINIH*
Ga0062385_111897511	3300004080	Bog Forest Soil	NGINQYKHGITRTYVYLDDAGRCYLKAEKGGFAPGNWGVELGKMEACLAGLDSSLATPYDEEFIARKRNALQQQGISLLTIEVKPRDINIH*
Ga0070763_103493212	3300005610	Soil	VEPNWAPLENRLGRTGCVGFMFMGRVNGINQYKHGITRTYLYLDDASNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEQFILRKRNALQQQGISLLTIEVQPQDINIH*
Ga0075521_106724482	3300006642	Arctic Peat Soil	MGRVNGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEEFIVRKRNALQQQGISLLTIEVQPHDISIH*
Ga0075520_11394791	3300006795	Arctic Peat Soil	MGRVNGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEEFIVRKRNALQQQGISLLTIEVQPQDINIH*
Ga0116108_10423372	3300009519	Peatland	MGFMFMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGAELGKMEACLARLDSSLATPYDEEFIVRKRNALRQQGISLLTIEVQAHDINIH*
Ga0116111_100005324	3300009616	Peatland	MFMGRVNGINQYKHGITRTYLYLDDAGNCHMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEEFIVRKRNALQQQGISLLTIEVQPHDINIH*
Ga0116125_10099953	3300009628	Peatland	MGFMFMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGVELGKMEACLARLDSSLATPYDEEFIVRKRNALRQQGISLLTIEVQAHDINIH*
Ga0116120_10593961	3300009641	Peatland	MFMGRVNGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACLARLAASLATPYDEEFIVRKRNALHQQGISLLTIEVQPQDINIH*
Ga0074046_100387612	3300010339	Bog Forest Soil	MFMGRVNGINQYKHGITRTYLYLDDASNCYLKAEKGGYVPGNWGVELGKMEACLARLDSSLATPYDEEFIVRKRNALQQQGIPLLTIEVQPQDINIH*
Ga0074046_100884962	3300010339	Bog Forest Soil	MFMGRVNGINQYKHGITRTYLYLDDAGRCYLKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEEFIVRKRNALQQQGISLLTIEVQPHDINIH*
Ga0074046_102368732	3300010339	Bog Forest Soil	MFMGRVNGINQYKHGITRTYLYLDDAGRCYLKAEKGGYVPGNWGAELGKMEACLAGLGASLATPYDKEYIARKHNALQQQGISLLTIEIQPHDINIH*
Ga0074045_107942411	3300010341	Bog Forest Soil	MLMGRVNGINLYKHGITRTYLNLDDDGSCYLKVEKGTYAPGNWDIELGKLEASLATLGASLATPYDEEFIVRKRNALQEQGISLLTIKIQPYEISIH*
Ga0074044_104060862	3300010343	Bog Forest Soil	MLMGRVNGITLYKHGITRTYLNLDDAGNCYVKAEKGSYAPGNWETELDELEACLATLGDRLATPYDEEFIVRRRNALQEQGISLLTIKVQPYEINIH*
Ga0074044_104286652	3300010343	Bog Forest Soil	MFMGRVNGINQYKHGITRTYLYLDDAGKCYLKAEKGGFVAGNWGVELGKMEACLARLDASLATPYDEEFVLRKRNALQQQGVSLLTIEVQPQDINTH*
Ga0074044_105619991	3300010343	Bog Forest Soil	GFMYMGRVNGINQYKHGITRTYVYLDDAGRCYLKAEKGGFAPGNWGVELGKMEACLAGLDSSLATPYDEEFIARKRNALQQQGISLLTIEVKPRDINIH*
Ga0126381_1007387791	3300010376	Tropical Forest Soil	VKGDESGTELRSFVYLDDTGGCYLKTEKGGGPAGNWGVELGKMEACPARLDASLAHPTDEEFIVRKLNVLQARGISRLTIEGQPDEIDSH*
Ga0136449_1006696741	3300010379	Peatlands Soil	VRRRLNRKRSSERRCRVEPDWNPLEKRLGKTRCVGFMLMGRVNGINLYKHGITRTYLNLDDAGNCYMKAEKGSYAPGNWDVELDKLEACLATLGASLATPYDEEFIVRKRNALQEQGISLLTIKVQPYEINIH*
Ga0136449_1007478812	3300010379	Peatlands Soil	MLMGRVNGINLYKHGITRTYLNLDDAGNCYVKAEKGSYAPGNWEIELDELEACLTTLGASLATPYDEEFIVQKRNALQEQGISLLTIKVQPNEINIH*
Ga0136449_1015159211	3300010379	Peatlands Soil	LENRLGTTRCVGFMFMGRVNGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEEFIVRKRNALQQQGV*
Ga0136449_1029646991	3300010379	Peatlands Soil	MFMGRVNGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACRARLDASLATPYDEQFIVRKRNALQQQGISLLTIEVRPHDTNIH*
Ga0181524_100968772	3300014155	Bog	MSMGRVNGINQYKHGITRTYLYLDDAGRCYLKTEKGGFVPGNWGVELGKMEACLARLDASLATPYDEEFVVRKRNALQQQGIPLLTIEVQPQDINIH*
Ga0181518_100092063	3300014156	Bog	MFMGRVNGINQYKHGITRTYLYLDDAGNSYMKAEKGGYVPGNWGVELGKMEACLARLAASLATPYDEEFIVRKRNALQQQGISLLTIEVQPQDINIH*
Ga0181518_104022512	3300014156	Bog	MGFMFMGRVNGINHYKHGITRTYLYLNDAGNCYLKEEKGGFVPGNWGVELGKMEACLAGLDSSLATPYDEEFIVRKRNALRQQGISLLTIEVQAHDIRTH*
Ga0181530_104814302	3300014159	Bog	GRVNGINQYKHGITRTYLYLDDAGRCYLKTEKGGFVPGNWGVELGKMEACLARLDASLATPYDEEFVVRKRNALQQQGIPLLTIEVQPQDINIH*
Ga0181538_100093397	3300014162	Bog	MGFMFMGRVNGINHYKHGITRTYLYLNDAGNCYLKEEKGGFVPGNWGVELGKMEACLAGLDSSLATPYDKEFIVRKRNALRQQGISLLTIEVQAHDINTH*
Ga0181532_1000375914	3300014164	Bog	MFMGRVNGINQYKHGITRTYLYLDDASNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEEFIVRKRNALQKQGISLLTIEVQPQDINIH*
Ga0181532_100049602	3300014164	Bog	MGFMFMGRVNGINHYKHGITRTYLYLDDAGNCHLKEEKGGFVPGNWGVELGKMEACLARLDSSLATPYDEEFIVRKRNALRQQGISLLTIEVQAHDINIH*
Ga0181532_101330382	3300014164	Bog	MGFMFMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWDVELGKMEACLARLDSSLATPYDEEFIVRKRNALRQQGISLLTIEVQAHDINAH*
Ga0181523_101348581	3300014165	Bog	MYMGRVNGINQYKHGITRTYLYLDDVGRCHLKAEKGGYVPGNWGVELGKMEACLAGLGASLATPYDEEFIVRKRNALQQQGISLLTIKLQPDNMNIH*
Ga0181523_103773622	3300014165	Bog	MFMGRVNGINQYKHGITRTYLYLDDAGNSYMKAEKGGYVPGNWGVELGKMEACLARLAASLATPYDEEFIVRKRNALQKQ
Ga0181526_100455172	3300014200	Bog	MYMGRVNGINQYKHGITRTYLYLDDVGRCHLKAEKGGYVPGNWGVELGKMEACLAGLGASLATPYDEEFIVRKRNALQQQGISLLTIEVQPQDINIH*
Ga0075355_11892041	3300014322	Natural And Restored Wetlands	MFMGRVNGINQYKHGITRTYLYLDDAGNCYTKAEKGGYVPGNWGVELGKMEACLAGLAASLATPYDEEFILRKRNALQQQGISLLMIEVQPHDISIN*
Ga0182013_103729682	3300014492	Bog	MGFMFMGRLNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGTWGVELGKMEACLARLDSSLATPYAEEFIVRKRNALRQQGISLLTIEVQAHEINIH*
Ga0182016_105403322	3300014493	Bog	YKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGVELGKMEACLARLDSSLATPYDEEFIVRKRNALRQLGISLLTIEVQAHDINIH*
Ga0182016_106780782	3300014493	Bog	LENRLGRARCMGFMFMGRVNGIDHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGVELGKMEACLARLDSSLATPYAEEFIVRKRNALRQQGISLLTIEVQAHEINIH*
Ga0182024_104309702	3300014501	Permafrost	MFMGRVNGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACLARLAASLATPYDEEFIVRKRNALQQQGVSLLTIEVQPQDINIH*
Ga0181522_105889201	3300014657	Bog	MGFMFMGRVNGINHYKHGITRTYLYLDDAGHCYLKEEKGGFVPGNWDVELGKMEACLARLDSSLATPYDEEFIVRKRNALRQQGISLLTIEVQAHDINIH*
Ga0182030_115488512	3300014838	Bog	FMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGTWGVELGKMEACLARLDSSLATPYAEEFIVRKRNALRQQGISLLTIEVQAHEINIH*
Ga0167644_11116092	3300015206	Glacier Forefield Soil	MFMGRVNGINQYKHGITRTYLYLDDASNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEQFILRKRNALQQQGIWLLTIEVQPHDIDIL*
Ga0181505_108763682	3300016750	Peatland	MGRVNGINHYQHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGVELGKMEACLARLDSSLATPYDEEFIVRKRNALRQQGISLLTIEVQAHDINIH
Ga0187848_100181862	3300017935	Peatland	MGFMFMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGAELGKMEACLARLDSSLATPYDEEFIVRKRNALRQQGISLLTIEVQAHDINIH
Ga0187847_104771321	3300017948	Peatland	VGFMFMGRVNGINQYKHGITRTYLYLDDASNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEQFIVRKRNALQQQGISLLTIEVQPHDTNIH
Ga0187817_111366671	3300017955	Freshwater Sediment	VGFMFMGRVNGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACLARLDSSLATPYDEEFIVRKRNALQQQGIPLLTIELQPTT
Ga0187778_100053517	3300017961	Tropical Peatland	MFMGRVNGINQYKHGITRTYLNLDDEGNCYVRAERGGYLRGDWEAELGKLEARLATLGANLATPYDEEFIAQKQKALQEQGISLLTIEVEPQEVKIH
Ga0187781_107734021	3300017972	Tropical Peatland	TRTYLNFDDEGNCYVRAERGGYLRGDWEAELCKLGTCLATLGADLATPYDEEFIAQKRKALLEQGTSLLTIEVEPQEVKLH
Ga0187870_10967902	3300017998	Peatland	VGFMFMGRVNGINQYKHGITRTYLNLDDAGNCYVHAERGGCLRGDWENELGKLEACLATLGADLATPYDEAFIAQKRKALLDQGISLLTIEMEPQEVKIH
Ga0187876_100001543	3300018003	Peatland	VGFMFMGRVNGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACLARLAASLATPYDEEFIVRKRNALHQQGISLLTIEVQPQDINIH
Ga0187888_10866982	3300018008	Peatland	MGFMFMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGVELGKMEACLARLDSSLATPYDEEFIVRKRNALRQQGISLLTIEVQAHDINIH
Ga0187874_104191441	3300018019	Peatland	GRTRCVGFMFMGRVNGINQYKHGITRTYLYLDDASNCYMKSEKGGYVPGNWGVELGKMEACLARLDASLATPYDEEFIVRKRNALQQQGVSLLTIEVQPQDINIH
Ga0187862_100004281	3300018040	Peatland	MGFMFMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGAELGKMEACLARLDSSLATPYDEEFIVRKRNALRQQGISLL
Ga0187859_108129692	3300018047	Peatland	NHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGVELGKMEACLARLDSSLATPYDEEFIVRKRNALRQQGISLLTIEVQAHDINIH
Ga0182031_10684832	3300019787	Bog	MGFMFMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGVELGKMEACLARLDSSLATPYAEEFIVRKRNALRQQGISLLTIEVQAHEINIH
Ga0182031_10866232	3300019787	Bog	MGFMFMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGTWGVELGKMEACLARLDSSLATPYAEEFIVRKRNALRQQGISLLTIEVQAHEINIH
Ga0210387_102105042	3300021405	Soil	VGFMFMGRVNGINQYKHGITRTYLYLDDASNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEQFIVRKRNALQQQGISLLTIKVQPHDINIH
Ga0210386_117736531	3300021406	Soil	VGFMFMGRVNGINQYKHGITRTYLYLDDASTCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEQFIVRKRNALQQQGISLLTIEVEP
Ga0224556_10181572	3300024295	Soil	MGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGVELGKMEACLARLDSSLATPYDEEFIVRKRNALRQQGISLLTIEVPAHDIKIH
Ga0208821_10562102	3300025432	Peatland	MGFMFMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGAELGKMEACLARLDSSLATPYDEEFIVRKRNALRQQGI
Ga0208562_11171281	3300025460	Peatland	MGFMFMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGVELGKMEACLARLDSSLATPYDEEFIVRKRNALRQQGISLLTIEVQAHDINI
Ga0208080_10641552	3300025553	Arctic Peat Soil	MGRVNGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEEFIVRKRNALQQQGISLLTIEVQPQDINIH
Ga0209385_11300422	3300025650	Arctic Peat Soil	MFMGRVNGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEEFIVRKRNALQQQGISLLTIEVQPQDINIH
Ga0209638_11855492	3300025725	Arctic Peat Soil	MGRVNGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEEFIVRKRNALQQQGISLLTIEVQP
Ga0209904_10009332	3300027394	Thawing Permafrost	VGFMFMGRVNGINQYKHGITRTYLYLDDASNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEQFIVRKRNALQQQGISLLTIEVQPHVINIH
Ga0209656_102076751	3300027812	Bog Forest Soil	MFMGRVNGINQYKHGITRTYLYLDDAGNCYLKAEKGGYTPGNWGVELGKMEACLARLDASLATPYDEEFIVRKRKALQQQGISLLTIEVQPHDINIH
Ga0209039_100508212	3300027825	Bog Forest Soil	MGRVNGINQYKHGITRTYLYLDDAGNCYLKAEKGGFVPGNWGVELGKMEACLARLDASLATPYDEEFVLRKRNALQQQGISLLTIEVQPQDINIH
Ga0209039_100700322	3300027825	Bog Forest Soil	MGRVNGINQYKHGITRTYLYLDDASNCYLKAEKGGYVPGNWGVELGKMEACLARLDSSLATPYDEEFIVRKRNALQQQGIPLLTIEVQPQDINIH
Ga0209693_103773262	3300027855	Soil	MGRVNGINQYKHGITRTYLYLDDASNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEQFILRKRNALQQQGIWLL
Ga0302189_100676741	3300028788	Bog	MGFMFMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGVELGKMEACLARLDSSLATPYAEEFIVRKRNALRQQGIS
Ga0302197_101808252	3300028873	Bog	MGFMFMGRLNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGTWGVELGKMEACLATPYDEEFIVRKRNALRQQGISLLTIEVQAHDINIH
Ga0308309_100880562	3300028906	Soil	VEPNWAPLENRLGRTGCVGFMFMGRVNGINQYKHGITRTYLYLDDASNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEQFILRKRNALQQQGIWLLTIEVQPHDIDIL
Ga0311327_100688401	3300029883	Bog	MFMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGTWGVELGKMEACLARLDSSLATPYAEEFIVRKRNALRQQGISLLTIEVQAHEINIH
Ga0311346_103305752	3300029952	Bog	MGFMFMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGTWGVELGKMEACLARLDSSLATPYAEEFIVRKRNALRQQGISLLTIEVQAHDINIH
Ga0311339_102630252	3300029999	Palsa	MGFMFMGRLNGINHYKHGITRAYLYLDDAGNCYLKKEKGGFVPGNWGVELGKMEACLARLDSSLATPYDEEFIVRKRNALRQQGISLLTIEVPAHDIKIH
Ga0311338_113888171	3300030007	Palsa	MGFMFMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGVELGKMEACLARLDSSLATPYAEEFIVRKRNALRQQGISLLTIEVQALDINIH
Ga0302307_100897562	3300031233	Palsa	MGFMFMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGVELGKMEACLARLDSSLATPYDEEFIVRKRNALRQQGISLLTIEVQALDINIH
Ga0302320_111966402	3300031524	Bog	TRTYLYLDDAGNCYLKEEKGGFVPGNWGVELGKMEACLARLDSSLATPYDEEFIVRKRNALRQLGISLLTIEVQAHDINIH
Ga0302326_112207561	3300031525	Palsa	MGFMFMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGVELGKMEACLARLDSSLATPYDEEFIVRKRNALRQQGISLLTIEVPAHDIKIH
Ga0311301_103963623	3300032160	Peatlands Soil	MGRVNGINLYKHGITRTYLNLDDAGNCYVKAEKGSYAPGNWEIELDELEACLTTLGASLATPYDEEFIVQKRNALQEQGISLLTIKVQPNEINIH
Ga0311301_107439952	3300032160	Peatlands Soil	VGFMFMGRVNGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACRARLDASLATPYDEQFIVRKRNALQQQGISLLTIEVQPHDTNIH
Ga0315268_100099057	3300032173	Sediment	MGRVNGINQYKHGITRTYLNLDDEGNCYIRAQRDGYLPGNWEAELRKLEACLATLGANLATRYDEELIAQKRKALLEQGISLLTIEMEPQEVKIH
Ga0335085_113876561	3300032770	Soil	MGRVNGINQYKHGITRTYLYLDDAGNCYLKAEKGGYTPGNWGVELSKMEACLARLDASLATPYDEEFIVRKRNALQQQGISLLTIEVQPHDTNIH
Ga0335082_105203562	3300032782	Soil	TRCVGFMFMGRVNGINQYKHGITRTYLYLDDAGRCYLKAEKGGYVPGNWGCELSKMEACLAGLDASLATPYDEEFIVRKRNALQRQGISLLTIEVHPHNMNIH
Ga0335082_105758242	3300032782	Soil	VGFMFMGRVNGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDQEFIVRKHHALQQQGVSLLTIEVQPQDINIH
Ga0335079_101159792	3300032783	Soil	VGFMFMGRVNGINRYKHGITRTYLYLDDASNCYMEAEKGGYVPGNWGVELGKMEACLARLDASLVTPYDQEFIVRKRHALQQQGVSLLTIEVQPQDVNIH
Ga0335079_106538902	3300032783	Soil	PLENRLGRTRCVGFMFMGRVNGINQYKHGITRTYLYLDDASNCYVKAEKGGYVPGNWGVELGKMEACLAGLAANLATPYDDEFIVRKRNALQQQGISLLMMEVQPHDINIH
Ga0335078_103409992	3300032805	Soil	VGFMFMGRINGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEEFIVRKRNALQQQGVSLLTIEVQPQDINIH
Ga0335080_107938152	3300032828	Soil	VGFMFMGRVNGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDQEFIVRKRHALQQQGVSLLTIEVQPQDINIH
Ga0335070_103955702	3300032829	Soil	VGFMFMGRINGINQYKHGITRTYLYLDDAGTCYMKAEKGGYIPGNWGVELGKMEACLARLDASLATPYDEQFIARKRNALQQQGVSLLTIEVQPLDINIH
Ga0335070_104486412	3300032829	Soil	MGRVNGINQYKHGITRTYLNLDDAGNCYVRAERGGYLRGDWESELGKLEACLATLGVNLATPYDDAFIAQKRKALQEQGISLLTIEMEPQEVKIH
Ga0335081_100847293	3300032892	Soil	MGRVNGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEEFIVRKRNALQQQGVSLLTIKVQPQDINIH
Ga0335081_121257482	3300032892	Soil	RTRCVGFMFMGRINGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDQEFIVRKRHALQQQGVSLLTIEVPPQDINIH
Ga0335069_104889542	3300032893	Soil	MGRVNGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDQEFIVRKHHALQQQGVSLLTIEVQPQDINIH
Ga0335069_127300082	3300032893	Soil	VGFMFMGRINGINQYKHGITRTYLYLDDAGTCYMKAEKGGYIPGNWGVELGKMEACLARLDASLATPYDEQFIARKRNALQQQGVSLLTI
Ga0335071_104316322	3300032897	Soil	GRTRCVGFMFMGRVNGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDQEFIVRKHHALQQQGVSLLTIEVQPQDINIH
Ga0335083_113164712	3300032954	Soil	GITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDQEFIVRKHHALQQQGVSLLTIEVQPQDINIH
Ga0335073_114880041	3300033134	Soil	NGINQYKHGITRTYLYLDDAGNCYVKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEEFIVRKRNALRQQGISLLTIEVQPHDINIH
Ga0335077_102263772	3300033158	Soil	MGRVNGINRYKHGITRTYLYLDDASNCYMEAEKGGYVPGNWGVELGKMEACLARLDASLVTPYDQEFIVRKRHALQQQGVSLLTIEVQPQDVNIH
Ga0326728_1000041352	3300033402	Peat Soil	MGFMFMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGIELGKMEACLARLDSSLASPYDEEFIVRKRNALRQLGISLLTIEVQAHDINIH
Ga0334804_004476_785_1066	3300033818	Soil	MGFMFMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGVELGKMEACLATPYDEEFIVRKRNALRQQGISLLTIEVQAHDINIH
Ga0334828_025039_870_1172	3300033822	Soil	MGFMFMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGVELGKMEACLARLDSSLATPYDEEFIVRKRNALRQLGISLLTIEVQAHDINIH
Ga0334790_001644_15183_15476	3300033887	Soil	MFMGRVNGINQYKHGITRTYLYLDDAGNCYMKAEKGGYVPGNWGVELGKMEACLARLDASLATPYDEQFIVRKRNALQQQGISLLTIEVQPHDTNIH
Ga0334827_009826_2288_2590	3300034065	Soil	MGFMFMGRVNGINHYKHGITRTYLYLDDAGNCYLKEEKGGFVPGNWGVELGKMEACLARLDSSLATPYDEEFIVRKRNALRQQGISLLTIEVQAHEINIH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091898

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences