NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F091862

Metagenome / Metatranscriptome Family F091862

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F091862
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 45 residues
Representative Sequence MEQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITDG
Number of Associated Samples 75
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 12.15 %
% of genes near scaffold ends (potentially truncated) 75.70 %
% of genes from short scaffolds (< 2000 bps) 98.13 %
Associated GOLD sequencing projects 66
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (49.533 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(36.449 % of family members)
Environment Ontology (ENVO) Unclassified
(93.458 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(85.981 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 35.71%    β-sheet: 26.19%    Coil/Unstructured: 38.10%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF04098Rad52_Rad22 25.23
PF02867Ribonuc_red_lgC 4.67

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0209Ribonucleotide reductase alpha subunitNucleotide transport and metabolism [F] 4.67


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms62.62 %
UnclassifiedrootN/A37.38 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001683|GBIDBA_10030383All Organisms → Viruses → Predicted Viral2304Open in IMG/M
3300002519|JGI25130J35507_1082915All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300006736|Ga0098033_1227739Not Available511Open in IMG/M
3300006738|Ga0098035_1175396All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300006750|Ga0098058_1097789All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300006750|Ga0098058_1134644Not Available657Open in IMG/M
3300006750|Ga0098058_1144635Not Available630Open in IMG/M
3300006751|Ga0098040_1088372Not Available939Open in IMG/M
3300006754|Ga0098044_1293560Not Available623Open in IMG/M
3300006768|Ga0098071_119555Not Available578Open in IMG/M
3300006926|Ga0098057_1084864All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300006927|Ga0098034_1026870All Organisms → Viruses → Predicted Viral1749Open in IMG/M
3300006927|Ga0098034_1108956Not Available791Open in IMG/M
3300006927|Ga0098034_1226070Not Available519Open in IMG/M
3300006927|Ga0098034_1227933Not Available517Open in IMG/M
3300006947|Ga0075444_10201159All Organisms → cellular organisms → Bacteria805Open in IMG/M
3300007346|Ga0070753_1280012Not Available599Open in IMG/M
3300007539|Ga0099849_1233752All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium681Open in IMG/M
3300007756|Ga0105664_1018610All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300007758|Ga0105668_1091979All Organisms → Viruses → Predicted Viral1332Open in IMG/M
3300007963|Ga0110931_1023932All Organisms → Viruses → Predicted Viral1843Open in IMG/M
3300007963|Ga0110931_1064417All Organisms → Viruses → Predicted Viral1106Open in IMG/M
3300008012|Ga0075480_10556777Not Available547Open in IMG/M
3300008050|Ga0098052_1296782Not Available611Open in IMG/M
3300008050|Ga0098052_1368292Not Available537Open in IMG/M
3300008216|Ga0114898_1155949All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300008216|Ga0114898_1186396All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300008217|Ga0114899_1190692All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300008217|Ga0114899_1190808All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300008218|Ga0114904_1150201Not Available547Open in IMG/M
3300008219|Ga0114905_1099965All Organisms → Viruses → Predicted Viral1007Open in IMG/M
3300008219|Ga0114905_1239330All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300008220|Ga0114910_1151292All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300008627|Ga0115656_1164755All Organisms → cellular organisms → Bacteria904Open in IMG/M
3300009376|Ga0118722_1364761All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300009412|Ga0114903_1049362All Organisms → cellular organisms → Bacteria990Open in IMG/M
3300009412|Ga0114903_1108876All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300009412|Ga0114903_1112059Not Available601Open in IMG/M
3300009413|Ga0114902_1126875Not Available663Open in IMG/M
3300009414|Ga0114909_1084293All Organisms → cellular organisms → Bacteria889Open in IMG/M
3300009414|Ga0114909_1135029All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300009418|Ga0114908_1167170All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300009418|Ga0114908_1185528Not Available652Open in IMG/M
3300009595|Ga0105214_103568All Organisms → cellular organisms → Bacteria880Open in IMG/M
3300009603|Ga0114911_1102003All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300009604|Ga0114901_1178072All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300009605|Ga0114906_1111912All Organisms → cellular organisms → Bacteria972Open in IMG/M
3300009605|Ga0114906_1206296All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300009619|Ga0105236_1039259All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300009619|Ga0105236_1043837Not Available582Open in IMG/M
3300009619|Ga0105236_1061924All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300009620|Ga0114912_1070804All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter862Open in IMG/M
3300009620|Ga0114912_1114090All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300009622|Ga0105173_1015951All Organisms → Viruses → Predicted Viral1100Open in IMG/M
3300009622|Ga0105173_1028118All Organisms → cellular organisms → Bacteria880Open in IMG/M
3300009703|Ga0114933_10928309All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium552Open in IMG/M
3300010150|Ga0098056_1202679All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300010150|Ga0098056_1237226Not Available606Open in IMG/M
3300010151|Ga0098061_1063438All Organisms → cellular organisms → Bacteria1418Open in IMG/M
3300010296|Ga0129348_1207116Not Available666Open in IMG/M
3300011013|Ga0114934_10082371All Organisms → Viruses → Predicted Viral1593Open in IMG/M
3300017703|Ga0181367_1034438Not Available907Open in IMG/M
3300017703|Ga0181367_1043143All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria800Open in IMG/M
3300017703|Ga0181367_1054630All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300017715|Ga0181370_1029849Not Available708Open in IMG/M
3300017772|Ga0181430_1104997All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium839Open in IMG/M
3300020415|Ga0211553_10426010All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300021977|Ga0232639_1175478All Organisms → cellular organisms → Bacteria817Open in IMG/M
3300022227|Ga0187827_10395820All Organisms → cellular organisms → Bacteria859Open in IMG/M
3300025029|Ga0207900_103558All Organisms → Viruses → Predicted Viral1488Open in IMG/M
3300025072|Ga0208920_1077912Not Available630Open in IMG/M
3300025097|Ga0208010_1004886All Organisms → Viruses → Predicted Viral3881Open in IMG/M
3300025109|Ga0208553_1108666All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300025114|Ga0208433_1119216Not Available642Open in IMG/M
3300025118|Ga0208790_1175082Not Available580Open in IMG/M
3300025125|Ga0209644_1043877All Organisms → Viruses → Predicted Viral1015Open in IMG/M
3300025125|Ga0209644_1120365Not Available625Open in IMG/M
3300025141|Ga0209756_1140683Not Available983Open in IMG/M
3300025141|Ga0209756_1236502All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300025218|Ga0207882_1008155All Organisms → Viruses → Predicted Viral1672Open in IMG/M
3300025241|Ga0207893_1030980Not Available757Open in IMG/M
3300025251|Ga0208182_1041743Not Available990Open in IMG/M
3300025251|Ga0208182_1070943Not Available674Open in IMG/M
3300025264|Ga0208029_1042854Not Available985Open in IMG/M
3300025264|Ga0208029_1048372All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium901Open in IMG/M
3300025277|Ga0208180_1042523All Organisms → Viruses → Predicted Viral1211Open in IMG/M
3300025277|Ga0208180_1111963All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300025300|Ga0208181_1103010Not Available545Open in IMG/M
3300025301|Ga0208450_1070223Not Available815Open in IMG/M
3300025873|Ga0209757_10084488Not Available961Open in IMG/M
3300025873|Ga0209757_10111082Not Available844Open in IMG/M
3300025873|Ga0209757_10301496Not Available510Open in IMG/M
3300027838|Ga0209089_10153685All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium1383Open in IMG/M
(restricted) 3300027865|Ga0255052_10404570Not Available668Open in IMG/M
3300028018|Ga0256381_1052717All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300028022|Ga0256382_1098094Not Available703Open in IMG/M
3300028039|Ga0256380_1018318All Organisms → Viruses → Predicted Viral1138Open in IMG/M
3300028039|Ga0256380_1045029Not Available680Open in IMG/M
3300031757|Ga0315328_10699948All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium573Open in IMG/M
3300031802|Ga0310123_10845969Not Available542Open in IMG/M
3300034628|Ga0326755_005215All Organisms → cellular organisms → Bacteria1234Open in IMG/M
3300034629|Ga0326756_015267All Organisms → cellular organisms → Bacteria886Open in IMG/M
3300034654|Ga0326741_038300All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300034654|Ga0326741_085125All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300034656|Ga0326748_018541All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300034656|Ga0326748_055643All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300034658|Ga0326751_025092All Organisms → cellular organisms → Bacteria594Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine36.45%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean29.91%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater6.54%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic5.61%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater3.74%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous2.80%
Background SeawaterEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater1.87%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.87%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.87%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface1.87%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.93%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.93%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.93%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.93%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.93%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids0.93%
Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume0.93%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001683Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assemblyEnvironmentalOpen in IMG/M
3300002519Marine viral communities from the Pacific Ocean - ETNP_2_300EnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006768Marine viral communities from Cariaco Basin, Caribbean Sea - 29_WHOI_OMZEnvironmentalOpen in IMG/M
3300006926Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007756Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDBack_2015_DNA CLC_assemblyEnvironmentalOpen in IMG/M
3300007758Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assemblyEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300008627Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 2.7-0.2umEnvironmentalOpen in IMG/M
3300009376Combined Assembly of Gp0137079, Gp0137080EnvironmentalOpen in IMG/M
3300009412Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2EnvironmentalOpen in IMG/M
3300009413Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12EnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009595Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500EnvironmentalOpen in IMG/M
3300009603Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904EnvironmentalOpen in IMG/M
3300009604Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009619Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250EnvironmentalOpen in IMG/M
3300009620Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300009703Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaGEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300017703Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaGEnvironmentalOpen in IMG/M
3300017715Marine viral communities from the Subarctic Pacific Ocean - Lowphox_06 viral metaGEnvironmentalOpen in IMG/M
3300017772Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10EnvironmentalOpen in IMG/M
3300020415Marine microbial communities from Tara Oceans - TARA_B100001146 (ERX555973-ERR599166)EnvironmentalOpen in IMG/M
3300021977Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Hafa_FS925 _150kmerEnvironmentalOpen in IMG/M
3300022227Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300025029Marine viral communities from the Pacific Ocean - LP-39 (SPAdes)EnvironmentalOpen in IMG/M
3300025072Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025097Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025109Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025114Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025218Marine viral communities from the Deep Pacific Ocean - MSP-103 (SPAdes)EnvironmentalOpen in IMG/M
3300025241Marine viral communities from the Deep Pacific Ocean - MSP-121 (SPAdes)EnvironmentalOpen in IMG/M
3300025251Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)EnvironmentalOpen in IMG/M
3300025264Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)EnvironmentalOpen in IMG/M
3300025277Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)EnvironmentalOpen in IMG/M
3300025300Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 (SPAdes)EnvironmentalOpen in IMG/M
3300025301Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300027838Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)EnvironmentalOpen in IMG/M
3300027865 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_21EnvironmentalOpen in IMG/M
3300028018Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 1600mEnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300028039Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 2300mEnvironmentalOpen in IMG/M
3300031757Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315EnvironmentalOpen in IMG/M
3300031802Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057EnvironmentalOpen in IMG/M
3300034628Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2961EnvironmentalOpen in IMG/M
3300034629Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600EnvironmentalOpen in IMG/M
3300034654Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244EnvironmentalOpen in IMG/M
3300034656Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 502_2477EnvironmentalOpen in IMG/M
3300034658Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 524_CTDEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
GBIDBA_1003038313300001683Hydrothermal Vent PlumeLHDAMEQAVIEAEHRKPMVVLHQKQMKYEDSYIVLKLKDFKEITDDDS*
JGI25130J35507_108291513300002519MarineSAMKQAIIEAEHRVPMVVLHEKQMKYDDSYVILRLKDFKEITDG*
Ga0098033_122773913300006736MarineHRVPMVVLHEKQMKYEDCYVIVRLKHFKEIVNDKTDYLTEEL*
Ga0098035_117539633300006738MarineDAMAQAVLEAEHRVPIIVLHEKQMKYEDSYVVIKIKDFKEITNEQ*
Ga0098058_109778933300006750MarineKQAIIEAEHRVPMVVLHEKQMKYDDSYVILRLKDFKEITDG*
Ga0098058_113464433300006750MarineKQAIIEAEHRVPMVVLHEKQMKYDDSYVILRLKDFKEITDESIK*
Ga0098058_114463513300006750MarineEIEAEHRTPMVVLHEKQMKYEDCYVIVRLKHFKEITDE*
Ga0098040_108837213300006751MarineEHRTPMVVLHEKQMKYEDCYVIVRLKHFKEITDE*
Ga0098044_129356013300006754MarineEAEHRVPMVVLHEKQMKYDDSYVILRLKDFKEITDESIK*
Ga0098071_11955513300006768MarineQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEIDNEQQEGVSDGVSKG*
Ga0098057_108486433300006926MarineAMKQAIIEAEHRVPMVVLHEKQMKYDDSYVILRLKDFKEITDG*
Ga0098034_102687033300006927MarineMEQAIIEAEHRVPMVVLHEKQMKYEDCYVIVRLKHFKEIVN
Ga0098034_110895633300006927MarineEQAIIEAEHRVPMVVLHEKQMKYEDCYVIVRLKHFKEIVNDKTDYLTEEL*
Ga0098034_122607013300006927MarineAIIEAEHRVPIVVLHEKQMKYENSLVVLRLKDFKEMTNEYDKTPDV*
Ga0098034_122793323300006927MarineEQAIIEAEHRVPMVVLHEKQMKYEDCYVIVRLKHFKEIVNEHEERVSD*
Ga0075444_1020115913300006947MarinePIIVLHEKQMKYEDSYVVIKIKDFKEITDEQNTI*
Ga0070753_128001213300007346AqueousEHRIPIVVLHEKQMKYEDSYVIIKIKDFKEITNEQKMDTTD*
Ga0099849_123375213300007539AqueousAMAQAILEAEHRIPIVVLHEKQMKYEDSYVIIKIKDFKEITNAQSN*
Ga0105664_101861023300007756Background SeawaterMKQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFK
Ga0105668_109197923300007758Background SeawaterMEQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEMTDEQEKSKE*
Ga0110931_102393243300007963MarineMDQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITDEQQERVSDGVGKG*
Ga0110931_106441713300007963MarineQAIIEAEHRVPMVVLHEKQMKYDESYVILRLKDFKEITDDKADCFAE*
Ga0075480_1055677713300008012AqueousMHDAMAQAILEAEHRIPIVVLHEKQMKYEDSYVIIKIKDFKEITNEQPD*
Ga0098052_129678213300008050MarineLHSAMKQAIIEAEHRVPMVVLHEKQMKYDESYVILRLKDFKEITDGEEN*
Ga0098052_136829233300008050MarineSAMKQAIIEAEHRVPMVVLHEKQMKYDESYVILRLKDFKEITDDKADCFAE*
Ga0114898_115594913300008216Deep OceanMDQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEIDNEQQEGVSDGVSKG*
Ga0114898_118639623300008216Deep OceanEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITDG*
Ga0114899_119069233300008217Deep OceanAIIEAEHRVPMVVLHEKQMKYEDSYVVLRLKDFKEITDG*
Ga0114899_119080833300008217Deep OceanAMKQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITDG*
Ga0114904_115020113300008218Deep OceanKQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITNDKADCFPK*
Ga0114905_109996543300008219Deep OceanSMKQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITDG*
Ga0114905_123933013300008219Deep OceanMAQAEIEAEHRTPMVVLHEKQMKYEDCYVVVRLKHFKEITDE*
Ga0114910_115129233300008220Deep OceanKQAIIEAEHRVPMVVLHEKQMKYEDSYVVLRLKDFKEITDG*
Ga0115656_116475513300008627MarineEHRVPIVVLHEKQMKYEDSYVILKIKDFKEITDESVETKN*
Ga0118722_136476123300009376MarineMKQAIIEAEHRVPMVVLHEKQMKYDDSYVVMRLKDFKEITDG*
Ga0114903_104936243300009412Deep OceanKQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITDG*
Ga0114903_110887623300009412Deep OceanMKQAIIEAEHRVPMVVLHEKQMKYDESYVILRLKDFKEIENEQQEGVSDGVSKG*
Ga0114903_111205923300009412Deep OceanKQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITDEQQERVSE*
Ga0114902_112687533300009413Deep OceanSMKQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITDEQQERVSE*
Ga0114909_108429323300009414Deep OceanMAQAEIEAEHRTPMVVLHEKQMKYEDCYVVVRLKDFKEITDE*
Ga0114909_113502913300009414Deep OceanWLHSSMKQAIIEAEHRVPMVVLHEKQMKYEDSYVVLRLKDFKEITDG*
Ga0114908_116717033300009418Deep OceanHRKNLPEWLHSSMKQAIIEAEHRVPMVVLHEKQMKYEDSYVVLRLKDFKEITDG*
Ga0114908_118552813300009418Deep OceanMKQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITDEQQERVSE*
Ga0105214_10356823300009595Marine OceanicMDQAIIEAEHRVPIVVLHEKQMKYEDSYVILRLKDFKEITDEQQERVYDAVGSG*
Ga0114911_110200313300009603Deep OceanMKQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEIDNG*
Ga0114901_117807213300009604Deep OceanIEAEHRVPMVVLHEKQMKYEDSYVVLRLKDFKEITDG*
Ga0114906_111191223300009605Deep OceanMEQAIIEAEHRVPMVVLHEKQMKYEDCYVIVKLKHFKEIVNDKTDYLTEEL*
Ga0114906_120629613300009605Deep OceanMDQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITDEQQERVSD*
Ga0105236_103925923300009619Marine OceanicMHDAMEQAVLEAEHRKPIVVLHQKQMKYEDSYIVLKLKD
Ga0105236_104383723300009619Marine OceanicWLHDAMNQAIIEAEHRVPLVVLHEKQMKYEDSYILLKLKDFKGITDEQQERVSE*
Ga0105236_106192423300009619Marine OceanicMKQAIIEAEHRVPMVVLHEKQMKYDESYVILRLKDFKEIENEQQERVSDGVSK
Ga0114912_107080413300009620Deep OceanHSAMKQAEIEAEHRVPIVVLHEKNLTYEDSYVIMRLNNFTKETDNAK*
Ga0114912_111409013300009620Deep OceanAEHRVPMVVLHEKQMKYEDSYVVLRLKDFKEITDG*
Ga0105173_101595123300009622Marine OceanicMDQAIIEAEHRVPMVVLHEKQMKYDDSYVILRLKDFKEITDGEEN*
Ga0105173_102811813300009622Marine OceanicMEQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITDG*
Ga0114933_1092830933300009703Deep SubsurfaceAEHRVPIVVLHEKQMKYEDSYVILKIKDFKEITDESIQED*
Ga0098056_120267913300010150MarineMKQAIIEAEHRVPMVVLHEKQMKYDESYVILRLKDFKEIENEQQERVSDGVSKG*
Ga0098056_123722613300010150MarineQAIIEAEHRVPMVVLHEKQMKYDESYVILRLKDFKEITDDKADCFPE*
Ga0098061_106343823300010151MarineMKQAIIEAEHRVPMVVLHEKQMKYDDSYVILRLKDFKEITDG*
Ga0129348_120711613300010296Freshwater To Marine Saline GradientEHRIPIVVLHEKQMKYEDSYVIIKIKDFKEITNEQPD*
Ga0114934_1008237143300011013Deep SubsurfaceMDQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITDG*
Ga0181367_103443843300017703MarineSAMKQAIIEAEHRVPMVVLHEKQMKYDESYVILRLKDFKEIENEQQERVSDGVGKG
Ga0181367_104314333300017703MarineSAMKQAIIEAEHRVPMVVLHEKQMKYDESYVILRLKDFKEITDG
Ga0181367_105463033300017703MarineEHRVPIIVLHEKQMKYEDSYVVIKIKDFKEITNEQ
Ga0181370_102984913300017715MarineQAIIEAEHRVPMVVLHEKQMKYDESYVILRLKDFKEIENEQQERVSD
Ga0181430_110499743300017772SeawaterEHRVPIVVLHEKQMKYEDSYVILKIKDFKEITDESIQEN
Ga0211553_1042601023300020415MarineMDQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITDEQQERVSD
Ga0232639_117547813300021977Hydrothermal Vent FluidsMEQAIIEAEHRVPMVVLHEKQMKYDDSYVILRLKDFKEITDG
Ga0187827_1039582013300022227SeawaterMKQAIIEAEHRVPMVVLHEKQMKYDDSYVILRLKDFKEITDG
Ga0207900_10355833300025029MarineAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEMTDG
Ga0208920_107791213300025072MarineEIEAEHRTPMVVLHEKQMKYEDCYVIVRLKHFKEITDE
Ga0208010_100488613300025097MarineHDAMEQAVIEAEHRKPMVVLHQKQMKYEDSYIVLKLKDFKEITDDNS
Ga0208553_110866633300025109MarineIIEAEHRVPMVVLHEKQMKYDDSYVILRLKDFKEITDG
Ga0208433_111921633300025114MarineMKQAIIEAEHRVPMVVLHEKQMKYDDSYVILRLKDFKEITDESIK
Ga0208790_117508223300025118MarineIEAEHRVPMVVLHEKQMKYDDSYVILRLKDFKEITDESIK
Ga0209644_104387713300025125MarineSAMEQAIIEAEHRVPMVVLHEKQMKYDDSYVILRLKDFKEITNDKADCFPK
Ga0209644_112036533300025125MarineMNQAILDAEHRVPLVVLHEKQMKYEDSYILLKLKDFKEIADGKER
Ga0209756_114068333300025141MarineAMKQAIIEAEHRVPMVVLHEKQMKYDDSYVILRLKDFKEITDESIK
Ga0209756_123650213300025141MarineAMKQAIIEAEHRVPMVVLHEKQMKYDDSYVILRLKDFKEITDG
Ga0207882_100815543300025218Deep OceanSAMNQAILDAEHRVPLVVLHEKQMKYEDSYILLKLKDFKEITDDKADCFPE
Ga0207893_103098033300025241Deep OceanLDAEHRVPLVVLHEKQMKYEDSYILLKLKDFKEIADVQ
Ga0208182_104174313300025251Deep OceanSSMKQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITNDKADCFPK
Ga0208182_107094333300025251Deep OceanSSMKQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITDEQQERVSE
Ga0208029_104285413300025264Deep OceanMKQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITNDKADCFPK
Ga0208029_104837243300025264Deep OceanILEAEHRVPLVVLHEKQMKYEDSYILLKLKDFKEISDE
Ga0208180_104252343300025277Deep OceanSSMKQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITNEQQERVSDRISKR
Ga0208180_111196323300025277Deep OceanIEAEHRVPMVVLHEKQMKYEDSYVVLRLKDFKEITDG
Ga0208181_110301033300025300Deep OceanAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITNDKADCFPK
Ga0208450_107022313300025301Deep OceanHSAMKQAIIEAEHRVPMVVLHEKQMKYDESYVILRLKDFKEIENEQQERVSDGVSKG
Ga0209757_1008448843300025873MarineIEAEHRKPMVVLHQKQMKYEDSYIVLKLKDFKEITDADS
Ga0209757_1011108233300025873MarineAVIEAEHRKPMVVLHQKQMKYEDSYIVLKLKDFKEITDDHS
Ga0209757_1030149623300025873MarineQAILDAEHRVPLVVLHEKQMKYEDSYILLKLKDFKEIADEQQERVSE
Ga0209089_1015368513300027838MarineSLPQWMHDAMDQAVLEAEHRKPIVVLHQKQMKYEDSYIVLKLKDFKEITDDNS
(restricted) Ga0255052_1040457013300027865SeawaterEHRKPVVVLHQKQMKYEDSYIVLKLKDFKEITDDNS
Ga0256381_105271713300028018SeawaterIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITDG
Ga0256382_109809413300028022SeawaterAEIEAEHRKPVVVLHEKQMKYEDCYVVVRLKHFKEITDEYEERVSD
Ga0256380_101831853300028039SeawaterHRVPMVVLHEKQMKYEDSYVILRLKDFKEITNDKADCFPK
Ga0256380_104502913300028039SeawaterEHRKPVVVLHQKQMKYEDSYIVLKLKDFREITDDNS
Ga0315328_1069994833300031757SeawaterMAQAVLEAEHRVPIIVLHEKQMKYEDSYVVIKIKDFKEITDEQNTI
Ga0310123_1084596913300031802MarineHSAMKQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEITNEQQERVSDGVGKG
Ga0326755_005215_119_2683300034628Filtered SeawaterMEQAVIEAEHRKPMVVLHQKQMKYEDSYIVLKLKDFKEIEDGQQERLSN
Ga0326756_015267_112_2763300034629Filtered SeawaterMEQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEIANEQQERVSDRTGKG
Ga0326741_038300_635_7843300034654Filtered SeawaterMEQATIEAEHRTPMVVLHEKQMKYEDCYVIVRLKHFKEIADEQQERVSN
Ga0326741_085125_241_3873300034654Filtered SeawaterMHDAMEQAVLEAEHRKPIVVLHQKQMKYEDSYIVLKLKDFKEITDDNS
Ga0326748_018541_334_4983300034656Filtered SeawaterMEQAIIEAEHRVPMVVLHEKQMKYEDSYVVVRLKDFKEITNEQQERVSDGTGKG
Ga0326748_055643_375_5063300034656Filtered SeawaterMNQAILDAEHRVPLVVLHEKQMKYEDSYILLKLKDFKEIADEQ
Ga0326751_025092_134_2983300034658Filtered SeawaterMEQAIIEAEHRVPMVVLHEKQMKYEDSYVILRLKDFKEIDNEQQERVSDGTGKG


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